View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14483_high_33 (Length: 335)
Name: NF14483_high_33
Description: NF14483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14483_high_33 |
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Alignment Details
Target: chr2 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 11 - 317
Target Start/End: Complemental strand, 2896836 - 2896528
Alignment:
| Q |
11 |
cagagaggcccttttaatgggatcttctatgataaatacaccgataagtgatgtattccaaatctataatagagac-ttttcattaatcaacataaataa |
109 |
Q |
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| T |
2896836 |
cagagaggcccttttaatgggatcttctatgataaatacaccgataagtgatgtattccaaatctataatagagaccttttcattaatcaacataaataa |
2896737 |
T |
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| Q |
110 |
aatagag-acctaaggaaataattaaaaaatacctttcatagttcaaataaacaatcatatccccatcatgcacaataaataaatatttgagtatatata |
208 |
Q |
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| T |
2896736 |
aatagagtacctaaggaaataattaaaaaatacctttcatagttcaaataaacaatcttatccccatcatgcacaataaataaatatttgagtatatata |
2896637 |
T |
|
| Q |
209 |
gtattgttctataatttggcaaacaccgaactctattattggcctgttgtattaaatgttcatcttcaataatcctcttctgcttggcatgtttttctaa |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2896636 |
gtattgttctataatttggcaaacaccgaactctattattggcctgttgtattaaatgttcatcttcaataatcctcttctgcttggcatgtttttctaa |
2896537 |
T |
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| Q |
309 |
aggcttctt |
317 |
Q |
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| T |
2896536 |
aggcttctt |
2896528 |
T |
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