View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14483_high_45 (Length: 265)
Name: NF14483_high_45
Description: NF14483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14483_high_45 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 9 - 250
Target Start/End: Original strand, 1608146 - 1608392
Alignment:
| Q |
9 |
ataatactgagattctttcttctagaaaaaatatgtttgtagacaaatagtggatattcttaaaagcaaaaattaagtaacaaatttatatttttaaga- |
107 |
Q |
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|||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1608146 |
ataaaactgagattctttcttctgaaaaaaatatgtttgtagacaaatagtggatattcttaaaagcaaaaattaagtaacaaatttatatttttaagaa |
1608245 |
T |
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| Q |
108 |
----gctttcgataattacccatatttatcttgagctagcaaaagtgcattagcagatatttctgcaaccagtctttgtctaagctccccacttgaatag |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
1608246 |
acatgctttcgataattacccatatttatcttgagctagcaaaagtgcattagcagatatttctgcaaccagtctttgtctatgctccccacttgaatag |
1608345 |
T |
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| Q |
204 |
cgaatgcattttggtaaaacacaacatccatgttgatgagttgcaat |
250 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1608346 |
cgaatgcattttggtaaaacacaacatccatgttgatgagttgcaat |
1608392 |
T |
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