View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14483_high_54 (Length: 243)
Name: NF14483_high_54
Description: NF14483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14483_high_54 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 20 - 227
Target Start/End: Complemental strand, 38348052 - 38347845
Alignment:
| Q |
20 |
aaaggaggaatcataaagacataacccatcttgtgaaacagtgaatttaaaaggaaaggatttaacatgcagagtttggaagaaaaggaagaaattgaat |
119 |
Q |
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| T |
38348052 |
aaaggaggaatcataaagacataacccatcttgtgaaacagtgaatttaaaaggaaaggatttaacatgcagagtttggaagaaaaggaagaaattgaat |
38347953 |
T |
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| Q |
120 |
tcgaaataaaaacagctaagaatgctataaagggaatagcagatgcatgatgattgatcaagaggagcgagctgtcttatagcaataggttagagtaaga |
219 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38347952 |
tcaaaataaaaacagctaagaatgctataaagggaatagcagatgcatgatgattgatcaagaggagcgagctgtcttatagcaataggttagagtaaga |
38347853 |
T |
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| Q |
220 |
gtagtata |
227 |
Q |
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|||||||| |
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| T |
38347852 |
gtagtata |
38347845 |
T |
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