View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14483_low_24 (Length: 374)

Name: NF14483_low_24
Description: NF14483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14483_low_24
NF14483_low_24
[»] chr7 (29 HSPs)
chr7 (23-120)||(38837217-38837324)
chr7 (23-120)||(7389389-7389496)
chr7 (23-123)||(38267037-38267147)
chr7 (17-120)||(3434562-3434675)
chr7 (25-120)||(4999509-4999614)
chr7 (26-120)||(11044188-11044282)
chr7 (23-121)||(35137532-35137640)
chr7 (23-120)||(8080376-8080483)
chr7 (23-120)||(36361906-36362013)
chr7 (23-121)||(19329841-19329949)
chr7 (23-120)||(36362026-36362133)
chr7 (23-121)||(31735883-31735984)
chr7 (23-119)||(32951486-32951592)
chr7 (23-117)||(3783998-3784102)
chr7 (23-120)||(19436180-19436287)
chr7 (23-120)||(40957707-40957814)
chr7 (23-65)||(3694432-3694474)
chr7 (84-120)||(35468919-35468955)
chr7 (65-120)||(22343361-22343416)
chr7 (65-120)||(46374847-46374902)
chr7 (12-54)||(35522952-35522994)
chr7 (65-121)||(8238211-8238268)
chr7 (83-120)||(10343626-10343663)
chr7 (123-151)||(16686191-16686219)
chr7 (123-151)||(17660427-17660455)
chr7 (65-121)||(21234400-21234456)
chr7 (121-149)||(32310915-32310943)
chr7 (121-149)||(36924442-36924470)
chr7 (82-122)||(39255985-39256025)
[»] chr4 (20 HSPs)
chr4 (23-120)||(42044360-42044467)
chr4 (23-133)||(11511455-11511575)
chr4 (23-120)||(48183042-48183149)
chr4 (23-122)||(6034042-6034151)
chr4 (23-125)||(41236342-41236454)
chr4 (26-120)||(50052424-50052528)
chr4 (23-120)||(480440-480547)
chr4 (23-120)||(29234238-29234345)
chr4 (23-123)||(54473526-54473636)
chr4 (23-120)||(24995100-24995207)
chr4 (26-120)||(29239886-29239990)
chr4 (26-121)||(3481653-3481758)
chr4 (12-65)||(41823947-41824000)
chr4 (25-120)||(23608235-23608340)
chr4 (65-122)||(50526216-50526273)
chr4 (23-122)||(31910190-31910299)
chr4 (65-121)||(40574778-40574834)
chr4 (65-120)||(55475191-55475246)
chr4 (23-65)||(53352559-53352601)
chr4 (121-149)||(43028089-43028117)
[»] chr5 (22 HSPs)
chr5 (25-119)||(36875607-36875702)
chr5 (23-121)||(40145406-40145514)
chr5 (25-117)||(18520879-18520981)
chr5 (23-121)||(33149631-33149739)
chr5 (23-120)||(2740274-2740381)
chr5 (23-120)||(36732935-36733042)
chr5 (23-122)||(35785197-35785306)
chr5 (23-121)||(42414295-42414403)
chr5 (27-120)||(13811652-13811755)
chr5 (25-121)||(14831813-14831919)
chr5 (23-121)||(28177774-28177882)
chr5 (18-63)||(31132411-31132456)
chr5 (26-120)||(35943888-35943992)
chr5 (65-120)||(3921310-3921365)
chr5 (30-65)||(31009053-31009088)
chr5 (23-65)||(15409603-15409645)
chr5 (79-121)||(26720515-26720557)
chr5 (79-121)||(26990264-26990306)
chr5 (127-156)||(32234457-32234486)
chr5 (121-150)||(40693163-40693192)
chr5 (121-150)||(43397628-43397657)
chr5 (121-149)||(3945023-3945051)
[»] chr3 (26 HSPs)
chr3 (23-121)||(53982010-53982118)
chr3 (23-122)||(33644198-33644307)
chr3 (23-120)||(49607414-49607521)
chr3 (23-115)||(52629305-52629407)
chr3 (26-120)||(8076393-8076497)
chr3 (23-120)||(17470405-17470512)
chr3 (23-120)||(54868888-54868995)
chr3 (23-119)||(31456690-31456796)
chr3 (27-120)||(27714888-27714991)
chr3 (65-120)||(11095398-11095453)
chr3 (23-121)||(26141525-26141633)
chr3 (17-116)||(48587078-48587187)
chr3 (65-120)||(33118896-33118951)
chr3 (65-115)||(26754700-26754750)
chr3 (68-122)||(45058601-45058654)
chr3 (68-120)||(14623887-14623939)
chr3 (68-120)||(24700002-24700054)
chr3 (23-120)||(51419353-51419460)
chr3 (65-120)||(36707469-36707524)
chr3 (23-54)||(41189757-41189788)
chr3 (65-120)||(47531865-47531920)
chr3 (65-123)||(30801778-30801836)
chr3 (68-120)||(8956762-8956814)
chr3 (68-120)||(35536626-35536678)
chr3 (23-51)||(47531944-47531972)
chr3 (121-149)||(53995128-53995156)
[»] chr2 (30 HSPs)
chr2 (23-120)||(17473020-17473127)
chr2 (12-120)||(7465717-7465835)
chr2 (26-120)||(33436096-33436200)
chr2 (23-120)||(9058480-9058587)
chr2 (25-117)||(28863458-28863560)
chr2 (23-121)||(13438342-13438450)
chr2 (23-120)||(10249375-10249482)
chr2 (23-123)||(40701475-40701585)
chr2 (23-121)||(28381648-28381756)
chr2 (23-120)||(5574481-5574588)
chr2 (23-120)||(30915463-30915570)
chr2 (23-120)||(32505641-32505748)
chr2 (23-117)||(19930813-19930917)
chr2 (26-121)||(27864703-27864808)
chr2 (23-121)||(40613895-40614003)
chr2 (23-120)||(38273135-38273242)
chr2 (26-120)||(20700815-20700919)
chr2 (68-120)||(33436211-33436263)
chr2 (23-122)||(4060683-4060792)
chr2 (23-120)||(38882804-38882913)
chr2 (79-119)||(41575138-41575178)
chr2 (65-120)||(26891549-26891604)
chr2 (23-54)||(42257269-42257300)
chr2 (121-151)||(7418976-7419006)
chr2 (120-150)||(23914903-23914933)
chr2 (65-114)||(3439985-3440034)
chr2 (127-156)||(22881460-22881489)
chr2 (121-149)||(8785366-8785394)
chr2 (121-149)||(31126562-31126590)
chr2 (65-121)||(43490120-43490176)
[»] chr1 (22 HSPs)
chr1 (23-122)||(9474869-9474978)
chr1 (23-120)||(2581915-2582022)
chr1 (23-121)||(47452313-47452421)
chr1 (23-120)||(3000319-3000426)
chr1 (23-123)||(48716275-48716385)
chr1 (23-121)||(27564728-27564836)
chr1 (23-120)||(38595154-38595261)
chr1 (23-120)||(38632314-38632421)
chr1 (12-124)||(44548358-44548480)
chr1 (23-120)||(8346381-8346488)
chr1 (23-120)||(32813247-32813354)
chr1 (23-120)||(41758805-41758912)
chr1 (23-120)||(50630458-50630565)
chr1 (30-120)||(51898683-51898783)
chr1 (23-65)||(43197-43239)
chr1 (20-65)||(13414826-13414871)
chr1 (65-124)||(50591045-50591104)
chr1 (65-121)||(37649197-37649253)
chr1 (122-150)||(8723138-8723166)
chr1 (121-149)||(9848517-9848545)
chr1 (65-113)||(26440741-26440789)
chr1 (121-149)||(49840215-49840243)
[»] chr8 (26 HSPs)
chr8 (23-121)||(15197332-15197440)
chr8 (23-120)||(12831047-12831154)
chr8 (23-121)||(504114-504222)
chr8 (23-121)||(34012289-34012397)
chr8 (23-120)||(14547922-14548029)
chr8 (23-123)||(40423936-40424046)
chr8 (23-121)||(23122590-23122698)
chr8 (23-120)||(1179933-1180040)
chr8 (23-120)||(44507080-44507187)
chr8 (26-121)||(20074938-20075035)
chr8 (26-120)||(10284627-10284731)
chr8 (30-120)||(37038479-37038579)
chr8 (23-121)||(43414574-43414682)
chr8 (26-119)||(5957831-5957934)
chr8 (26-65)||(8841428-8841467)
chr8 (25-128)||(15048177-15048289)
chr8 (23-63)||(9122252-9122292)
chr8 (81-119)||(9122196-9122234)
chr8 (79-120)||(4854922-4854963)
chr8 (23-115)||(10621080-10621182)
chr8 (65-120)||(16383377-16383432)
chr8 (65-120)||(34307216-34307271)
chr8 (79-120)||(30479533-30479574)
chr8 (121-149)||(8137492-8137520)
chr8 (65-120)||(24307838-24307893)
chr8 (23-120)||(25838197-25838296)
[»] chr6 (15 HSPs)
chr6 (23-117)||(22880651-22880755)
chr6 (23-121)||(32869677-32869785)
chr6 (23-121)||(17598553-17598661)
chr6 (23-120)||(6209458-6209565)
chr6 (23-120)||(29857827-29857934)
chr6 (23-120)||(11427616-11427725)
chr6 (23-123)||(31109393-31109503)
chr6 (23-120)||(31976248-31976355)
chr6 (65-123)||(15508069-15508127)
chr6 (23-65)||(23128120-23128162)
chr6 (23-120)||(31110754-31110859)
chr6 (65-120)||(15990087-15990142)
chr6 (65-120)||(30341405-30341460)
chr6 (68-121)||(31953078-31953131)
chr6 (121-149)||(10146910-10146938)
[»] scaffold0237 (1 HSPs)
scaffold0237 (23-120)||(4029-4136)
[»] scaffold1268 (1 HSPs)
scaffold1268 (26-121)||(925-1030)
[»] scaffold1267 (1 HSPs)
scaffold1267 (26-121)||(925-1030)
[»] scaffold0321 (1 HSPs)
scaffold0321 (23-65)||(10102-10144)


Alignment Details
Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 38837324 - 38837217
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||||||||||||||||||||||||          ||||| |||||||||||||||||||||| ||||||||||||||||||    
T  38837324 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtat 38837225  T
Q  113 cattactc 120  Q
    ||||||||    
T  38837224 cattactc 38837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 7389496 - 7389389
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||  ||| ||||||||||| ||||||||||||||||||    
T  7389496 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtat 7389397  T
Q  113 cattactc 120  Q
    ||||||||    
T  7389396 cattactc 7389389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 38267147 - 38267037
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||  |||||||||||| ||  |||||||||||||||||    
T  38267147 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtat 38267048  T
Q  113 cattactcaaa 123  Q
    |||||||||||    
T  38267047 cattactcaaa 38267037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 3434675 - 3434562
Alignment:
Q  17 gaagatagaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtct 106  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||          ||||||||||||  ||||||||||||||| |||||| |||||    
T  3434675 gaagagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtct 3434576  T
Q  107 atgtatcattactc 120  Q
    ||||||||||||||    
T  3434575 atgtatcattactc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 4999509 - 4999614
Alignment:
Q  25 aaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatca 114  Q
    ||||||||||||||| |||||||||||||||||||||||||          |||||||||||  || |||||||||||||||||||||||||||||||||    
T  4999509 aaaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatca 4999608  T
Q  115 ttactc 120  Q
    ||||||    
T  4999609 ttactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 11044282 - 11044188
Alignment:
Q  26 aaagagaaagtgtgcttgtgcggggtccacgtgactacgttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    ||||||||||||| ||||||||||||||||||||||||||     ||||||  |||| |||||||||| ||||||||||||||||||||||||||    
T  11044282 aaagagaaagtgtacttgtgcggggtccacgtgactacgtgtcaggggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactc 11044188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 35137640 - 35137532
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||| |||||||||||||||||||||||||          |||||||||||  ||||||||||||||| |||||||||||||| |||    
T  35137640 agaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttat 35137541  T
Q  113 cattactca 121  Q
    |||||||||    
T  35137540 cattactca 35137532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 8080376 - 8080483
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          || ||| |||||  ||||||||||||||| ||||||||||||||||||    
T  8080376 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtat 8080475  T
Q  113 cattactc 120  Q
    ||||||||    
T  8080476 cattactc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 36361906 - 36362013
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||| |||||||||||||||||||          |||||||||||  |||| |||||||||| ||||||||||||||||||    
T  36361906 agaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtat 36362005  T
Q  113 cattactc 120  Q
    ||||||||    
T  36362006 cattactc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 19329949 - 19329841
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||| ||||          ||||||||||||  || |||||||||||| |||||| |||||||||||    
T  19329949 agaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtat 19329850  T
Q  113 cattactca 121  Q
    |||||||||    
T  19329849 cattactca 19329841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 36362133 - 36362026
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||          ||||||||||||  |||| |||||| ||| ||||||||||||||||||    
T  36362133 agaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtat 36362034  T
Q  113 cattactc 120  Q
    ||||||||    
T  36362033 cattactc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 31735984 - 31735883
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt---tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattact 119  Q
    ||||||||||||||||||||||||||| |||| ||| | ||||   |||||||||||  ||| ||||||||||| |||||| |||||||||||||| |||    
T  31735984 agaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataact 31735885  T
Q  120 ca 121  Q
    ||    
T  31735884 ca 31735883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 32951486 - 32951592
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||||| |||  |||| ||||||| |||||||| ||||||||||||    
T  32951486 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtat 32951585  T
Q  113 cattact 119  Q
    |||||||    
T  32951586 cattact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 3784102 - 3783998
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||| ||||||||||||||          ||||||||||||  || | |||||||||| ||||||||||||||||||    
T  3784102 agaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtat 3784003  T
Q  113 catta 117  Q
    |||||    
T  3784002 catta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 19436180 - 19436287
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||| |||||| ||||||||||||||          ||||||||||||  || ||||||||| || |||||| |||||||||||    
T  19436180 agaaaagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtat 19436279  T
Q  113 cattactc 120  Q
    ||||||||    
T  19436280 cattactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 40957814 - 40957707
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||| |||| ||||||||||||||          |||||||||| |  ||| ||||||||||| ||||| ||||||||||||    
T  40957814 agaaaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtat 40957715  T
Q  113 cattactc 120  Q
    ||||||||    
T  40957714 cattactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 3694474 - 3694432
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt 65  Q
    ||||||||||||||||||||||||||| ||||| |||||||||    
T  3694474 agaaaagagaaagtgtgcttgtgcgggatccacatgactacgt 3694432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 35468919 - 35468955
Alignment:
Q  84 tgtattgccatctaagggtgtctatgtatcattactc 120  Q
    ||||||||||||||||| |||||||||||||||||||    
T  35468919 tgtattgccatctaaggatgtctatgtatcattactc 35468955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 22343416 - 22343361
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    ||||||||||||  | ||||||||||||| |||||||||| |||||||||| ||||    
T  22343416 ttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 46374847 - 46374902
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    ||||||||||||  |||||||| |||||| |||||| |||||||||||||| ||||    
T  46374847 ttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 35522994 - 35522952
Alignment:
Q  12 gagatgaagatagaaaagagaaagtgtgcttgtgcggggtcca 54  Q
    |||| ||||| ||||||||||||||||||||||||||| ||||    
T  35522994 gagaagaagagagaaaagagaaagtgtgcttgtgcgggatcca 35522952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 8238268 - 8238211
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatcta-agggtgtctatgtatcattactca 121  Q
    ||||||||||||  ||||||||||||||| ||| ||||||| |||||||||| |||||    
T  8238268 ttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataactca 8238211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 120
Target Start/End: Original strand, 10343626 - 10343663
Alignment:
Q  83 gtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  10343626 gtgtatttccacctaagggtgtctatgtatcattactc 10343663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 151
Target Start/End: Complemental strand, 16686219 - 16686191
Alignment:
Q  123 ataattttaatcaaaatttcataaaaaaa 151  Q
    |||||||||||||||||||||||||||||    
T  16686219 ataattttaatcaaaatttcataaaaaaa 16686191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 151
Target Start/End: Complemental strand, 17660455 - 17660427
Alignment:
Q  123 ataattttaatcaaaatttcataaaaaaa 151  Q
    |||||||||||||||||||||||||||||    
T  17660455 ataattttaatcaaaatttcataaaaaaa 17660427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 21234456 - 21234400
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactca 121  Q
    ||||||| ||||  |||||||||||| || |||||| |||||||||||||| |||||    
T  21234456 ttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataactca 21234400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 149
Target Start/End: Original strand, 32310915 - 32310943
Alignment:
Q  121 aaataattttaatcaaaatttcataaaaa 149  Q
    |||||||||||||||||||||||||||||    
T  32310915 aaataattttaatcaaaatttcataaaaa 32310943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 149
Target Start/End: Complemental strand, 36924470 - 36924442
Alignment:
Q  121 aaataattttaatcaaaatttcataaaaa 149  Q
    |||||||||||||||||||||||||||||    
T  36924470 aaataattttaatcaaaatttcataaaaa 36924442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 39255985 - 39256025
Alignment:
Q  82 ggtgtattgccatctaagggtgtctatgtatcattactcaa 122  Q
    |||||||||||| |||||| |||||||||||||| ||||||    
T  39255985 ggtgtattgccacctaaggttgtctatgtatcataactcaa 39256025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 42044360 - 42044467
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  42044360 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtat 42044459  T
Q  113 cattactc 120  Q
    ||||||||    
T  42044460 cattactc 42044467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 11511455 - 11511575
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||||||||||||||||||||||||          | |||||||||  ||||||||||||||| ||||||||||||||||||    
T  11511455 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtat 11511554  T
Q  113 cattactcaaataattttaat 133  Q
    ||||||||||| |||| ||||    
T  11511555 cattactcaaaaaattataat 11511575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 48183042 - 48183149
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||  |||||||||||||||  |||||||||||||||||    
T  48183042 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtat 48183141  T
Q  113 cattactc 120  Q
    ||||||||    
T  48183142 cattactc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 6034151 - 6034042
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||| ||||||||||||| |          |||||||||||  ||||||||||||||| ||||||||||||||||||    
T  6034151 agaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtat 6034052  T
Q  113 cattactcaa 122  Q
    ||||||||||    
T  6034051 cattactcaa 6034042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 41236454 - 41236342
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||||| |||  || |||||||||||| ||||||||||||||||||    
T  41236454 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtat 41236355  T
Q  113 cattactcaaata 125  Q
    |||||||| ||||    
T  41236354 cattactcgaata 41236342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 50052424 - 50052528
Alignment:
Q  26 aaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcat 115  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||  ||||||||||||||| |||||| ||||||||||||||    
T  50052424 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 50052523  T
Q  116 tactc 120  Q
    |||||    
T  50052524 tactc 50052528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 480440 - 480547
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||| ||||||||||||||||||||          |||||||||||  |||||||||||| || ||||||||||||||||||    
T  480440 agaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtat 480539  T
Q  113 cattactc 120  Q
    ||||||||    
T  480540 cattactc 480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 29234238 - 29234345
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||  ||| |  ||||||||||||||||||||||||||||||||||    
T  29234238 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtat 29234337  T
Q  113 cattactc 120  Q
    ||||||||    
T  29234338 cattactc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 54473526 - 54473636
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||| |||||||||||||||||||||||||||||||||          ||||||||||||  || ||||||||| || ||||||||||||||||||    
T  54473526 agaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtat 54473625  T
Q  113 cattactcaaa 123  Q
    |||||||||||    
T  54473626 cattactcaaa 54473636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 24995100 - 24995207
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||| |||||||||||||||||||||||||||||          || |||||||||  ||||||||||||||||||||||||||| || |||    
T  24995100 agaaaagagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatat 24995199  T
Q  113 cattactc 120  Q
    ||||||||    
T  24995200 cattactc 24995207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 29239990 - 29239886
Alignment:
Q  26 aaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcat 115  Q
    |||||||||||||||||||| |||||||||||||||||||          ||||||| |||  || |||||||||||| |||||||||||||||||||||    
T  29239990 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcat 29239891  T
Q  116 tactc 120  Q
    |||||    
T  29239890 tactc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 3481758 - 3481653
Alignment:
Q  26 aaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcat 115  Q
    |||||||||||||||||||| |||||||||||||||| ||          |||||||||||  ||| ||||||||||| |||| ||||||||||||||||    
T  3481758 aaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcat 3481659  T
Q  116 tactca 121  Q
    ||||||    
T  3481658 tactca 3481653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 41824000 - 41823947
Alignment:
Q  12 gagatgaagatagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt 65  Q
    |||| ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  41824000 gagaagaagagagaaaagagaaagtgtgcttgtgcggggtccatgtgactacgt 41823947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 23608340 - 23608235
Alignment:
Q  25 aaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatca 114  Q
    ||||||||||||||||||||| || || |||||||||||||          |||||||||||  || ||||||||| ||||||||||||||||| |||||    
T  23608340 aaaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatca 23608241  T
Q  115 ttactc 120  Q
    ||||||    
T  23608240 ttactc 23608235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 50526216 - 50526273
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactcaa 122  Q
    ||||||||||||  ||||||||||||||| |||| | |||||||||||||||||||||    
T  50526216 ttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactcaa 50526273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 31910299 - 31910190
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||||||||||||| ||| ||| |          ||||||||||||  ||| |||||||| || |||||| |||||||||||    
T  31910299 agaaaagagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtat 31910200  T
Q  113 cattactcaa 122  Q
    ||| ||||||    
T  31910199 cataactcaa 31910190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 40574834 - 40574778
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactca 121  Q
    ||||||||||||  ||||||||||| ||| |||||| |||||||||||||| |||||    
T  40574834 ttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactca 40574778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 55475246 - 55475191
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    ||||||||||||  ||||||||||||||| |||||| ||| |||||||||| ||||    
T  55475246 ttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 53352559 - 53352601
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt 65  Q
    |||||||||||||| |||||||||||||||||| | |||||||    
T  53352559 agaaaagagaaagtatgcttgtgcggggtccacttaactacgt 53352601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 149
Target Start/End: Complemental strand, 43028117 - 43028089
Alignment:
Q  121 aaataattttaatcaaaatttcataaaaa 149  Q
    |||||||||||||||||||||||||||||    
T  43028117 aaataattttaatcaaaatttcataaaaa 43028089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 7e-28; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 36875607 - 36875702
Alignment:
Q  25 aaaagagaaagtgtgcttgtgcggggtccacgtgactacgtt-gtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattact 119  Q
    ||||||||||||||||||||||||| ||||||||||||  || ||||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  36875607 aaaagagaaagtgtgcttgtgcgggatccacgtgactatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 40145514 - 40145406
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||||| |||  ||||||||||||||| ||||||||||||||||||    
T  40145514 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtat 40145415  T
Q  113 cattactca 121  Q
    |||||||||    
T  40145414 cattactca 40145406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 18520879 - 18520981
Alignment:
Q  25 aaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatca 114  Q
    ||||||||||||||||||||||||||||||||||||||||          ||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  18520879 aaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatca 18520978  T
Q  115 tta 117  Q
    |||    
T  18520979 tta 18520981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 33149631 - 33149739
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||| |||||||||||||||          |||||||||||  ||||||||||| ||| ||||||||||||||||||    
T  33149631 agaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtat 33149730  T
Q  113 cattactca 121  Q
    |||||||||    
T  33149731 cattactca 33149739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 2740381 - 2740274
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||| |||||||||||||||          |||||||||||  ||||||||||||||| |||||| |||||||||||    
T  2740381 agaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtat 2740282  T
Q  113 cattactc 120  Q
    ||||||||    
T  2740281 cattactc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 36732935 - 36733042
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||||||||||||||||||||| |          ||||||||||||  ||||||||||||| | ||||||||||||||||||    
T  36732935 agaaaagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtat 36733034  T
Q  113 cattactc 120  Q
    ||||||||    
T  36733035 cattactc 36733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 35785306 - 35785197
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||          |||||||||||  || |||||||||||| ||||||||||||||||||    
T  35785306 agaaaagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtat 35785207  T
Q  113 cattactcaa 122  Q
    ||||||||||    
T  35785206 cattactcaa 35785197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 42414295 - 42414403
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||| |||||||||||||||||||||||| |||||||||          |||||||||||  ||||||||||||||| |||  |||||||||||||    
T  42414295 agaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtat 42414394  T
Q  113 cattactca 121  Q
    |||||||||    
T  42414395 cattactca 42414403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 13811755 - 13811652
Alignment:
Q  27 aagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcatt 116  Q
    ||||||||||||||||||||||||||||||||||||||          ||||||||||||  || | |||||||||| ||||||||||||||||||| ||    
T  13811755 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcttt 13811656  T
Q  117 actc 120  Q
    ||||    
T  13811655 actc 13811652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 14831919 - 14831813
Alignment:
Q  25 aaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatca 114  Q
    |||| |||||||||||||||||||| |||||||||||||||          | |||||||||  ||||||||||||||| ||||| ||||||||||||||    
T  14831919 aaaaaagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatca 14831820  T
Q  115 ttactca 121  Q
    |||||||    
T  14831819 ttactca 14831813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 28177882 - 28177774
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||          |||||||||||  ||||||||||||||| |||||| |||||||||||    
T  28177882 agaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtat 28177783  T
Q  113 cattactca 121  Q
    ||| |||||    
T  28177782 cataactca 28177774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 31132456 - 31132411
Alignment:
Q  18 aagatagaaaagagaaagtgtgcttgtgcggggtccacgtgactac 63  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||||    
T  31132456 aagagagaaaagaaaaagtatgcttgtgcggggtccacgtgactac 31132411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 35943888 - 35943992
Alignment:
Q  26 aaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcat 115  Q
    |||||||||||||||||||| ||| ||||||| |||||||          |||||||||||  || | |||||||||| |||||||||||||||||||||    
T  35943888 aaagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcat 35943987  T
Q  116 tactc 120  Q
     ||||    
T  35943988 aactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 3921310 - 3921365
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    ||||||||||||  | ||||||||||||| |||||||||| |||||||||| ||||    
T  3921310 ttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 31009088 - 31009053
Alignment:
Q  30 agaaagtgtgcttgtgcggggtccacgtgactacgt 65  Q
    |||||||||||||||||||| |||||||||||||||    
T  31009088 agaaagtgtgcttgtgcgggatccacgtgactacgt 31009053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 15409603 - 15409645
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt 65  Q
    |||||||||| ||||||||||||||||||||| ||| ||||||    
T  15409603 agaaaagagagagtgtgcttgtgcggggtccatgtggctacgt 15409645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 121
Target Start/End: Complemental strand, 26720557 - 26720515
Alignment:
Q  79 aagggtgtattgccatctaagggtgtctatgtatcattactca 121  Q
    ||||||||||||||| |||||| |||||||||||||| |||||    
T  26720557 aagggtgtattgccacctaaggatgtctatgtatcataactca 26720515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 121
Target Start/End: Complemental strand, 26990306 - 26990264
Alignment:
Q  79 aagggtgtattgccatctaagggtgtctatgtatcattactca 121  Q
    ||||||||||||||| |||||| |||||||||||||| |||||    
T  26990306 aagggtgtattgccacctaaggatgtctatgtatcataactca 26990264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 32234486 - 32234457
Alignment:
Q  127 ttttaatcaaaatttcataaaaaaacaccg 156  Q
    ||||||||||||||||||||||||||||||    
T  32234486 ttttaatcaaaatttcataaaaaaacaccg 32234457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 150
Target Start/End: Complemental strand, 40693192 - 40693163
Alignment:
Q  121 aaataattttaatcaaaatttcataaaaaa 150  Q
    ||||||||||||||||||||||||||||||    
T  40693192 aaataattttaatcaaaatttcataaaaaa 40693163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 150
Target Start/End: Complemental strand, 43397657 - 43397628
Alignment:
Q  121 aaataattttaatcaaaatttcataaaaaa 150  Q
    ||||||||||||||||||||||||||||||    
T  43397657 aaataattttaatcaaaatttcataaaaaa 43397628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 149
Target Start/End: Complemental strand, 3945051 - 3945023
Alignment:
Q  121 aaataattttaatcaaaatttcataaaaa 149  Q
    |||||||||||||||||||||||||||||    
T  3945051 aaataattttaatcaaaatttcataaaaa 3945023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 53982118 - 53982010
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||||||||||||||||||||||||          |||||||||||  ||||||||||||||| ||||||||||||||||||    
T  53982118 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtat 53982019  T
Q  113 cattactca 121  Q
    |||||||||    
T  53982018 cattactca 53982010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 33644307 - 33644198
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||  ||||||||||||||| | ||||||||||||||||    
T  33644307 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtat 33644208  T
Q  113 cattactcaa 122  Q
    ||||||||||    
T  33644207 cattactcaa 33644198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 49607521 - 49607414
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||| ||| |||||||||||||||          |||||||||||  ||||||||||||||| ||||||||||||||||||    
T  49607521 agaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtat 49607422  T
Q  113 cattactc 120  Q
    ||||||||    
T  49607421 cattactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 52629407 - 52629305
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||| ||||||||||||||||||||          |||||||||||  ||||||||||||||| ||||||||||||||||||    
T  52629407 agaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtat 52629308  T
Q  113 cat 115  Q
    |||    
T  52629307 cat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 8076497 - 8076393
Alignment:
Q  26 aaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcat 115  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||  ||||||||| ||||| |||||||||| ||||||||||    
T  8076497 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcat 8076398  T
Q  116 tactc 120  Q
    |||||    
T  8076397 tactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 17470512 - 17470405
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||          ||||||||||||  || |||||||||||| |||| |||||||||||||    
T  17470512 agaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtat 17470413  T
Q  113 cattactc 120  Q
    ||||||||    
T  17470412 cattactc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 54868888 - 54868995
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||| ||||||||||||||||| |||||||          |||||||||||  || |||||||||||| ||||||||||||||||||    
T  54868888 agaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtat 54868987  T
Q  113 cattactc 120  Q
    ||||||||    
T  54868988 cattactc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 31456796 - 31456690
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||| ||||||||          ||||||||||||  ||||||||||||||  ||| ||||||||||||||    
T  31456796 agaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtat 31456697  T
Q  113 cattact 119  Q
    |||||||    
T  31456696 cattact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 120
Target Start/End: Original strand, 27714888 - 27714991
Alignment:
Q  27 aagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcatt 116  Q
    ||||||||||||||||||||||||||||| |||||||||          |||||||||||  ||||||||||| ||| |||| |||||||||||||||||    
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcatt 27714987  T
Q  117 actc 120  Q
    ||||    
T  27714988 actc 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 11095398 - 11095453
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  11095398 ttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 26141525 - 26141633
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||| |||||||| ||||| ||||          |||||||||||  ||||||||||||||| |||||| |||||||||||    
T  26141525 agaaaagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtat 26141624  T
Q  113 cattactca 121  Q
    ||| |||||    
T  26141625 cataactca 26141633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 48587078 - 48587187
Alignment:
Q  17 gaagatagaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtct 106  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||||          || ||| |||||  ||||||||||||||| |||||||| |||    
T  48587078 gaagagagaaaagagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatct 48587177  T
Q  107 atgtatcatt 116  Q
    ||||||||||    
T  48587178 atgtatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 33118896 - 33118951
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    ||||||||||||  |||||||||||| || ||||||||||||||||||||| ||||    
T  33118896 ttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 26754750 - 26754700
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcat 115  Q
    |||||||| ||| |||||||||||||||| ||||||||||||||| |||||    
T  26754750 ttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 45058601 - 45058654
Alignment:
Q  68 tgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactcaa 122  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||||| ||||||    
T  45058601 tgtgggtgt-caagggtgtattgccacctaagggtgtttatgtatcataactcaa 45058654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 14623887 - 14623939
Alignment:
Q  68 tgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    |||||||||  | ||||||||||||| |||||| |||||||||||||||||||    
T  14623887 tgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 24700002 - 24700054
Alignment:
Q  68 tgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    |||||||||  || |||||||||||| |||||| |||||||||||||||||||    
T  24700002 tgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcattactc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 51419353 - 51419460
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||||||||||| | ||| | ||||          |||||||||||  |||| ||||||| ||||||||| |||||||||||    
T  51419353 agaaaagagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtat 51419452  T
Q  113 cattactc 120  Q
    ||| ||||    
T  51419453 cataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 36707469 - 36707524
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    |||||||| |||  |||||||||||| || |||||||| |||||||||||||||||    
T  36707469 ttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 54
Target Start/End: Original strand, 41189757 - 41189788
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtcca 54  Q
    ||||||||||||||||||||||||||||||||    
T  41189757 agaaaagagaaagtgtgcttgtgcggggtcca 41189788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 47531920 - 47531865
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    |||||||| |||  || ||||||||||||||||||| |||||||||||||| ||||    
T  47531920 ttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 30801778 - 30801836
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactcaaa 123  Q
    |||||||||| |  |||||||||||  || |||||||||||||||||||||| ||||||    
T  30801778 ttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcattgctcaaa 30801836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 8956814 - 8956762
Alignment:
Q  68 tgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    |||||||||  |||| ||||||||||  ||||| |||||||||||||||||||    
T  8956814 tgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 35536678 - 35536626
Alignment:
Q  68 tgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    |||||||||  || ||||||||||||  ||||| |||||||||||||||||||    
T  35536678 tgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 51
Target Start/End: Complemental strand, 47531972 - 47531944
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggt 51  Q
    |||||||||||||||||||||||||||||    
T  47531972 agaaaagagaaagtgtgcttgtgcggggt 47531944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 149
Target Start/End: Complemental strand, 53995156 - 53995128
Alignment:
Q  121 aaataattttaatcaaaatttcataaaaa 149  Q
    |||||||||||||||||||||||||||||    
T  53995156 aaataattttaatcaaaatttcataaaaa 53995128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 17473127 - 17473020
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||| |||||||||||||||          |||||||||||  ||||||||||||||||||||||||||||||||||    
T  17473127 agaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtat 17473028  T
Q  113 cattactc 120  Q
    ||||||||    
T  17473027 cattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 7465717 - 7465835
Alignment:
Q  12 gagatgaagatagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaaggg 101  Q
    |||| ||||| | ||||||||||||||||||||| |||||||||||||||||||          |||||||||||  |||||||||||||||||||||||    
T  7465717 gagaagaagagataaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaaggg 7465816  T
Q  102 tgtctatgtatcattactc 120  Q
    |||||||||||||||||||    
T  7465817 tgtctatgtatcattactc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 33436096 - 33436200
Alignment:
Q  26 aaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcat 115  Q
    ||||||||||||||||||||||||||||||||||||||||          |||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  33436096 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 33436195  T
Q  116 tactc 120  Q
    |||||    
T  33436196 tactc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 9058587 - 9058480
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||| |||||||||          |||||||||||  ||||||||||||||| ||||||||||||||||||    
T  9058587 agaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtat 9058488  T
Q  113 cattactc 120  Q
    ||||||||    
T  9058487 cattactc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 28863560 - 28863458
Alignment:
Q  25 aaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatca 114  Q
    |||||||||||||||||||||||||||||||||||||||||          |||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  28863560 aaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatca 28863461  T
Q  115 tta 117  Q
    |||    
T  28863460 tta 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 13438450 - 13438342
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||  |||| ||||||| || ||||||||||||||||||    
T  13438450 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtat 13438351  T
Q  113 cattactca 121  Q
    |||||||||    
T  13438350 cattactca 13438342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 10249375 - 10249482
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||  || ||||||||| || ||||||||||||||||||    
T  10249375 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtat 10249474  T
Q  113 cattactc 120  Q
    ||||||||    
T  10249475 cattactc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 40701585 - 40701475
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||| ||||||||||||||||| |||||||          |||||||||||  || |||||||||||| ||||||||||||||||||    
T  40701585 agaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtat 40701486  T
Q  113 cattactcaaa 123  Q
    |||||||||||    
T  40701485 cattactcaaa 40701475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 28381648 - 28381756
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||||||| ||||| ||||||||||          |||||||||||  || |||||||||||| ||||||||||||||||||    
T  28381648 agaaaagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtat 28381747  T
Q  113 cattactca 121  Q
    |||||||||    
T  28381748 cattactca 28381756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 5574481 - 5574588
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||| ||||||||||||||          || |||||||||  ||||||||||||||| ||||| ||||||||||||    
T  5574481 agaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtat 5574580  T
Q  113 cattactc 120  Q
    ||||||||    
T  5574581 cattactc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 30915570 - 30915463
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||| |||||||||||||||||||          || |||||| ||  ||||||||||||||| ||||||||||||||||||    
T  30915570 agaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtat 30915471  T
Q  113 cattactc 120  Q
    ||||||||    
T  30915470 cattactc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 32505641 - 32505748
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||| |||||||||||||||||||||||||||||||||||          ||||||||||||  || ||||||||| || ||||||||||||||||||    
T  32505641 agaaaatagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtat 32505740  T
Q  113 cattactc 120  Q
    ||||||||    
T  32505741 cattactc 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 19930813 - 19930917
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||| ||||||||||||||| |||||||||          ||||||| |||  ||||||||||||||| ||||||||||||||||||    
T  19930813 agaaaagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtat 19930912  T
Q  113 catta 117  Q
    |||||    
T  19930913 catta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 27864808 - 27864703
Alignment:
Q  26 aaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcat 115  Q
    ||||||||||||||||| |||||||||||||||| |||||          ||||||| |||  |||||||||||||||  ||||||||||||||||||||    
T  27864808 aaagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 27864709  T
Q  116 tactca 121  Q
    ||||||    
T  27864708 tactca 27864703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 40613895 - 40614003
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||||||||||||| ||| | ||||          |||||||||||  ||||||||||||||| |||||| |||||||||||    
T  40613895 agaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtat 40613994  T
Q  113 cattactca 121  Q
    ||| |||||    
T  40613995 cataactca 40614003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 38273135 - 38273242
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||| |||||||||||| ||| ||||||          |||||||||||  |||||||||||||||||||||  |||||||||||    
T  38273135 agaaaagagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtat 38273234  T
Q  113 cattactc 120  Q
    ||| ||||    
T  38273235 cataactc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 20700919 - 20700815
Alignment:
Q  26 aaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcat 115  Q
    ||||||||||||||||| |||||||||||||||||||||          |||||| || ||  |||||||||||||||  ||||| ||||||||||||||    
T  20700919 aaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcat 20700820  T
Q  116 tactc 120  Q
    |||||    
T  20700819 tactc 20700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 33436263 - 33436211
Alignment:
Q  68 tgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    |||||||||  || ||||||||||||||||||| |||||||||||||||||||    
T  33436263 tgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcattactc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 4060792 - 4060683
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||| ||||||||||||| |||||| ||||||| |||||||          ||||||| |||  || ||||||||| || ||||||||||||||||||    
T  4060792 agaaaaaagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtat 4060693  T
Q  113 cattactcaa 122  Q
    ||||||||||    
T  4060692 cattactcaa 4060683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 38882804 - 38882913
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcgggg---tccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatg 109  Q
    ||||||||||||||| ||||||||||||   |||||||||||||||          ||||||| |||  |||||| |||||||| |||||||||||||||    
T  38882804 agaaaagagaaagtgcgcttgtgcgggggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatg 38882902  T
Q  110 tatcattactc 120  Q
    |||||||||||    
T  38882903 tatcattactc 38882913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 41575178 - 41575138
Alignment:
Q  79 aagggtgtattgccatctaagggtgtctatgtatcattact 119  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  41575178 aagggtgtattaccatctaaggatgtctatgtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 26891549 - 26891604
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    ||||||||||||  | ||||||||||||| ||||||||| ||||||||||| ||||    
T  26891549 ttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcataactc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 54
Target Start/End: Complemental strand, 42257300 - 42257269
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtcca 54  Q
    ||||||||||||||||||||||||||||||||    
T  42257300 agaaaagagaaagtgtgcttgtgcggggtcca 42257269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 151
Target Start/End: Complemental strand, 7419006 - 7418976
Alignment:
Q  121 aaataattttaatcaaaatttcataaaaaaa 151  Q
    |||||||||||||||||||||||||||||||    
T  7419006 aaataattttaatcaaaatttcataaaaaaa 7418976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 150
Target Start/End: Original strand, 23914903 - 23914933
Alignment:
Q  120 caaataattttaatcaaaatttcataaaaaa 150  Q
    |||||||||||||||||||||||||||||||    
T  23914903 caaataattttaatcaaaatttcataaaaaa 23914933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 3440034 - 3439985
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatca 114  Q
    |||||||||||| || | ||||||||||| ||||||||||||| ||||||    
T  3440034 ttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 22881489 - 22881460
Alignment:
Q  127 ttttaatcaaaatttcataaaaaaacaccg 156  Q
    ||||||||||||||||||||||||||||||    
T  22881489 ttttaatcaaaatttcataaaaaaacaccg 22881460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 149
Target Start/End: Original strand, 8785366 - 8785394
Alignment:
Q  121 aaataattttaatcaaaatttcataaaaa 149  Q
    |||||||||||||||||||||||||||||    
T  8785366 aaataattttaatcaaaatttcataaaaa 8785394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 149
Target Start/End: Complemental strand, 31126590 - 31126562
Alignment:
Q  121 aaataattttaatcaaaatttcataaaaa 149  Q
    |||||||||||||||||||||||||||||    
T  31126590 aaataattttaatcaaaatttcataaaaa 31126562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 43490176 - 43490120
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactca 121  Q
    ||||||||||||  | |||||||||| || |||||||||| |||||||||| |||||    
T  43490176 ttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactca 43490120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 6e-25; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 9474869 - 9474978
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||| |||||||||||||||||||||||||          |||||||||||  ||||||||||||||| ||||||||||||||||||    
T  9474869 agaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtat 9474968  T
Q  113 cattactcaa 122  Q
    ||||||||||    
T  9474969 cattactcaa 9474978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 2582022 - 2581915
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||          |||||||||||  ||||||||||||||| ||||||||||||||||||    
T  2582022 agaaaaaagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtat 2581923  T
Q  113 cattactc 120  Q
    ||||||||    
T  2581922 cattactc 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 47452313 - 47452421
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||| |||||||||||||||          |||||||||||  ||||||||||| ||| ||||||||||||||||||    
T  47452313 agaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtat 47452412  T
Q  113 cattactca 121  Q
    |||||||||    
T  47452413 cattactca 47452421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 3000426 - 3000319
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||| ||||||||||||||||||||          |||||||||||  ||||||||||||||| |||||||||| |||||||    
T  3000426 agaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtat 3000327  T
Q  113 cattactc 120  Q
    ||||||||    
T  3000326 cattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 48716275 - 48716385
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||| |||||||||||||||||||||||||||||||||          |||||||| |||  || |||||||||||| ||||||||||||||||||    
T  48716275 agaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtat 48716374  T
Q  113 cattactcaaa 123  Q
    |||||||||||    
T  48716375 cattactcaaa 48716385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 27564728 - 27564836
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||| ||||          ||||||||||||  || |||||||||||| |||||| |||||||||||    
T  27564728 agaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtat 27564827  T
Q  113 cattactca 121  Q
    |||||||||    
T  27564828 cattactca 27564836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 38595261 - 38595154
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||| |||||||||||||||||||          ||||||||||||  ||||||||||||||| |||| ||||| |||||||    
T  38595261 agaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtat 38595162  T
Q  113 cattactc 120  Q
    ||||||||    
T  38595161 cattactc 38595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 38632314 - 38632421
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||| |||||||||||||||||||||||||||||||||          |||||||| |||  || |||||||||||| ||||||||||||||||||    
T  38632314 agaaaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtat 38632413  T
Q  113 cattactc 120  Q
    ||||||||    
T  38632414 cattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 44548358 - 44548480
Alignment:
Q  12 gagatgaagatagaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaaggg 101  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||          |||||||||| |  || |||||||||||| |||| |     
T  44548358 gagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaaga 44548457  T
Q  102 tgtctatgtatcattactcaaat 124  Q
    |||||||||||||||| ||||||    
T  44548458 tgtctatgtatcattaatcaaat 44548480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 8346381 - 8346488
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||||| |||||||||||||||||          ||||||||||||  || |||||||||||| |||| |||| ||||||||    
T  8346381 agaaaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtat 8346480  T
Q  113 cattactc 120  Q
    ||||||||    
T  8346481 cattactc 8346488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 32813354 - 32813247
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||||||||||||| ||||| ||||          |||||||||||  ||||||||||||||| |||||| |||||||||||    
T  32813354 agaaaagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtat 32813255  T
Q  113 cattactc 120  Q
    ||| ||||    
T  32813254 cataactc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 41758912 - 41758805
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||| |||||||||||||| ||||||||||          ||||||| |||  |||||||||||||||| ||| |||||||||||||    
T  41758912 agaaaagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtat 41758813  T
Q  113 cattactc 120  Q
    ||||||||    
T  41758812 cattactc 41758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 50630565 - 50630458
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||    |||| |||||||||| |||||||| |||||||||    
T  50630565 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtat 50630466  T
Q  113 cattactc 120  Q
    ||||||||    
T  50630465 cattactc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 51898683 - 51898783
Alignment:
Q  30 agaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattact 119  Q
    |||||||||||||||||||| |||||||||||||||          |||||||||||  ||||||||||||||| |||| | ||||||||||||||||||    
T  51898683 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattact 51898782  T
Q  120 c 120  Q
    |    
T  51898783 c 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 43239 - 43197
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt 65  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  43239 agaaaagagaaagtgtgcttgtgcggagtccacgtgactacgt 43197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 13414871 - 13414826
Alignment:
Q  20 gatagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt 65  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||    
T  13414871 gatagaaaagagaaaatgtgcttgtgtggggtccacgtgactacgt 13414826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 50591045 - 50591104
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactcaaat 124  Q
    ||||||||||||  | ||||||||||||| |||||||||| |||||||||| ||||||||    
T  50591045 ttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactcaaat 50591104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 37649253 - 37649197
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactca 121  Q
    ||||||||||||  ||| ||||||||||| |||| | ||||||||||||||||||||    
T  37649253 ttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactca 37649197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 8723166 - 8723138
Alignment:
Q  122 aataattttaatcaaaatttcataaaaaa 150  Q
    |||||||||||||||||||||||||||||    
T  8723166 aataattttaatcaaaatttcataaaaaa 8723138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 149
Target Start/End: Original strand, 9848517 - 9848545
Alignment:
Q  121 aaataattttaatcaaaatttcataaaaa 149  Q
    |||||||||||||||||||||||||||||    
T  9848517 aaataattttaatcaaaatttcataaaaa 9848545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 26440789 - 26440741
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatc 113  Q
    ||||||||||||  |||||||||||| ||||||||| ||||||| ||||    
T  26440789 ttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatc 26440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 149
Target Start/End: Original strand, 49840215 - 49840243
Alignment:
Q  121 aaataattttaatcaaaatttcataaaaa 149  Q
    |||||||||||||||||||||||||||||    
T  49840215 aaataattttaatcaaaatttcataaaaa 49840243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 15197440 - 15197332
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||  ||||||||||||||| ||||| ||||||||||||    
T  15197440 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtat 15197341  T
Q  113 cattactca 121  Q
    |||||||||    
T  15197340 cattactca 15197332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 12831154 - 12831047
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||  |||||||||||| || ||||||||||||||||||    
T  12831154 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtat 12831055  T
Q  113 cattactc 120  Q
    ||||||||    
T  12831054 cattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 504114 - 504222
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||          |||||||||||  || |||||||||||| ||||||||||||||||||    
T  504114 agaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtat 504213  T
Q  113 cattactca 121  Q
    |||||||||    
T  504214 cattactca 504222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 34012289 - 34012397
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||| |||||||||||||||          |||||||||||  ||||||||||| ||| ||||||||||||||||||    
T  34012289 agaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtat 34012388  T
Q  113 cattactca 121  Q
    |||||||||    
T  34012389 cattactca 34012397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 14548029 - 14547922
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||  || |||||||||||| ||||||||||||||||||    
T  14548029 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtat 14547930  T
Q  113 cattactc 120  Q
    | ||||||    
T  14547929 ctttactc 14547922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 40423936 - 40424046
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||| ||||||||          |||||||| |||  ||||||||||||||| |||||||| |||||||||    
T  40423936 agaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtat 40424035  T
Q  113 cattactcaaa 123  Q
    |||||||||||    
T  40424036 cattactcaaa 40424046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 23122590 - 23122698
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||| |||||||||||||||||||||          ||||||||||||  || ||||||||||||  |||||||||||||||||    
T  23122590 agaaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtat 23122689  T
Q  113 cattactca 121  Q
    |||||||||    
T  23122690 cattactca 23122698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 1179933 - 1180040
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||  ||||| |||||||||          |||||||||||  ||||||||||| ||| ||||||||||||||||||    
T  1179933 agaaaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtat 1180032  T
Q  113 cattactc 120  Q
    ||||||||    
T  1180033 cattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 44507080 - 44507187
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||| ||||||| ||||||||||||||||||||          |||||||||||  ||| ||||||| ||| ||||||||||||||||||    
T  44507080 agaaaagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtat 44507179  T
Q  113 cattactc 120  Q
    ||||||||    
T  44507180 cattactc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 20074938 - 20075035
Alignment:
Q  26 aaagagaaagtgtgcttgtgcggggtccacgtg--actacgttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactca 121  Q
    ||||||||||||||||||||| |||||||||||  ||    || |||||||||  ||| ||||||||||| |||||| ||||||||||||||||||||    
T  20074938 aaagagaaagtgtgcttgtgcagggtccacgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactca 20075035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 10284627 - 10284731
Alignment:
Q  26 aaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcat 115  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||  ||| |||||||| ||  ||||||||||||||||||||    
T  10284627 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcat 10284726  T
Q  116 tactc 120  Q
     ||||    
T  10284727 aactc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 37038579 - 37038479
Alignment:
Q  30 agaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattact 119  Q
    |||||||||||||||||||| |||||||||||||||          |||||||||||  ||||||||||||||| |||| | ||||||||||||||||||    
T  37038579 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattact 37038480  T
Q  120 c 120  Q
    |    
T  37038479 c 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 43414574 - 43414682
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||| |||| ||||| ||||          |||||||||||  |||||||| ||||||||||||| |||||||||||    
T  43414574 agaaaagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtat 43414673  T
Q  113 cattactca 121  Q
    ||| |||||    
T  43414674 cataactca 43414682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 5957934 - 5957831
Alignment:
Q  26 aaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcat 115  Q
    |||||||||||||| ||||||||| |||||||||||||||          |||||||||||  ||||||||||||||| |||||  ||||||||||||||    
T  5957934 aaagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcat 5957835  T
Q  116 tact 119  Q
    ||||    
T  5957834 tact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 8841428 - 8841467
Alignment:
Q  26 aaagagaaagtgtgcttgtgcggggtccacgtgactacgt 65  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8841428 aaagagaaagtgtgcttgtgcggggtccacgtgactacgt 8841467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 128
Target Start/End: Original strand, 15048177 - 15048289
Alignment:
Q  25 aaaagagaaagtgtgcttgtgcggggtccacgtgactacgt--------tgtgtg-ggtgtacaagggtgtattgccatctaagggtgtctatgtatcat 115  Q
    |||||||||||||||||||||||||||||| ||| ||||||        | |||| |||||  ||||||||||||||| |||||| ||||||||||||||    
T  15048177 aaaagagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 15048276  T
Q  116 tactcaaataatt 128  Q
     |||||| |||||    
T  15048277 aactcaattaatt 15048289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 9122292 - 9122252
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactac 63  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  9122292 agaaaagagaaagtgtgcttgtgcgggatccacgtgactac 9122252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 119
Target Start/End: Complemental strand, 9122234 - 9122196
Alignment:
Q  81 gggtgtattgccatctaagggtgtctatgtatcattact 119  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  9122234 gggtgtattgccacctaagggtgtctatgtatcattact 9122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 4854922 - 4854963
Alignment:
Q  79 aagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    ||||||||||||||| |||||| |||||||||||||||||||    
T  4854922 aagggtgtattgccacctaaggatgtctatgtatcattactc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 10621080 - 10621182
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||| || | ||| ||||||          |||||||||||  ||||||||||| ||| |||||| |||||||||||    
T  10621080 agaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtat 10621179  T
Q  113 cat 115  Q
    |||    
T  10621180 cat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 16383432 - 16383377
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    ||||||||||||  | ||||||||||||| |||||||||| |||||||||| ||||    
T  16383432 ttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 16383377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 34307271 - 34307216
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    ||||||||||||  | ||||||||||||| |||||||||| |||||||||| ||||    
T  34307271 ttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 30479533 - 30479574
Alignment:
Q  79 aagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    ||||||||||||||| |||||||||| |||||||||| ||||    
T  30479533 aagggtgtattgccacctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 149
Target Start/End: Complemental strand, 8137520 - 8137492
Alignment:
Q  121 aaataattttaatcaaaatttcataaaaa 149  Q
    |||||||||||||||||||||||||||||    
T  8137520 aaataattttaatcaaaatttcataaaaa 8137492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 24307838 - 24307893
Alignment:
Q  65 ttgtgtgggtgtacaaggg-tgtattgccatctaagggtgtctatgtatcattactc 120  Q
    |||||||||||| |||||| |||||||||| |||||||||| |||||||||| ||||    
T  24307838 ttgtgtgggtgt-caagggatgtattgccacctaagggtgtttatgtatcataactc 24307893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 25838296 - 25838197
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactac--gttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    |||||||| ||||||||||||| ||| ||||| ||||| ||  ||||||||| |||  ||  ||||||||||| |||||| | ||||| |||||| ||||    
T  25838296 agaaaagaaaaagtgtgcttgtacggagtccatgtgacaacgtgttgtgtggatgtcaaaaagtgtattgccacctaaggatatctatttatcataactc 25838197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 22880651 - 22880755
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  22880651 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtat 22880750  T
Q  113 catta 117  Q
    |||||    
T  22880751 catta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 32869785 - 32869677
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  32869785 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtat 32869686  T
Q  113 cattactca 121  Q
    | |||||||    
T  32869685 ctttactca 32869677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 17598661 - 17598553
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||||||||||||||||||||| |||          ||||||||||||  || | |||||||||| ||||||||||||||||||    
T  17598661 agaaaagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtat 17598562  T
Q  113 cattactca 121  Q
    |||||||||    
T  17598561 cattactca 17598553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 6209458 - 6209565
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||| ||||||||||||||||||||||          ||||||| ||||  ||  ||||||||||| ||||||||||||||||||    
T  6209458 agaaaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtat 6209557  T
Q  113 cattactc 120  Q
    ||||||||    
T  6209558 cattactc 6209565  T

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Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 29857934 - 29857827
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||| |||||| ||||||| |||||||          |||||||||||  || ||||||||||||||||| |||||||||||||    
T  29857934 agaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtat 29857835  T
Q  113 cattactc 120  Q
    ||||||||    
T  29857834 cattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 11427725 - 11427616
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacg----------ttgtgtgggtgtacaagggtgtattgccatcta--agggtgtctatgt 110  Q
    ||||||||||||||||||||||||||| ||||||||||||||          ||||||||||||  |||| |||||||||| |||  |||||||||||||    
T  11427725 agaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgt 11427626  T
Q  111 atcattactc 120  Q
    ||||||||||    
T  11427625 atcattactc 11427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 31109393 - 31109503
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||          ||||||| |||  ||||||||||||||| ||||||||||||||  ||    
T  31109393 agaaaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaat 31109492  T
Q  113 cattactcaaa 123  Q
    |||||||||||    
T  31109493 cattactcaaa 31109503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 31976355 - 31976248
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    ||||||||||||||||||||||||||||| || ||||| ||||          |||||||||||  |||||| |||||||| |||||| |||||||||||    
T  31976355 agaaaagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtat 31976256  T
Q  113 cattactc 120  Q
    ||| ||||    
T  31976255 cataactc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 15508069 - 15508127
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactcaaa 123  Q
    ||||||||||||  | ||||||||||||| |||||||||| |||||||||| |||||||    
T  15508069 ttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactcaaa 15508127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 23128120 - 23128162
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt 65  Q
    ||||||||||||||||||||||| ||| |||||||||||||||    
T  23128120 agaaaagagaaagtgtgcttgtgtgggatccacgtgactacgt 23128162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 31110754 - 31110859
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt--------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatca 114  Q
    |||||||||||||||||||||||| ||||||| |||  |||||        | |||| ||||  ||||||||||||||| |||||| |||||||||||||    
T  31110754 agaaaagagaaagtgtgcttgtgcagggtccatgtggttacgtgtcagatttttgtgagtgtcaaagggtgtattgccacctaaggatgtctatgtatca 31110853  T
Q  115 ttactc 120  Q
    | ||||    
T  31110854 taactc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 15990087 - 15990142
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    ||||||||||||  | ||||||||||||| |||||||||| |||||||||| ||||    
T  15990087 ttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 30341405 - 30341460
Alignment:
Q  65 ttgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactc 120  Q
    ||||||||||||  | ||||||||||||| |||||||||| |||||||||| ||||    
T  30341405 ttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 31953078 - 31953131
Alignment:
Q  68 tgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcattactca 121  Q
    |||||||||  | ||||||||||||| |||||| ||||||| ||||||||||||    
T  31953078 tgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcattactca 31953131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 149
Target Start/End: Original strand, 10146910 - 10146938
Alignment:
Q  121 aaataattttaatcaaaatttcataaaaa 149  Q
    |||||||||||||||||||||||||||||    
T  10146910 aaataattttaatcaaaatttcataaaaa 10146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 4136 - 4029
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtat 112  Q
    |||||||||||||||||||| |||||| ||||||| |||||||          |||||||||||  || ||||||||||||||||| |||||||||||||    
T  4136 agaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtat 4037  T
Q  113 cattactc 120  Q
    ||||||||    
T  4036 cattactc 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 925 - 1030
Alignment:
Q  26 aaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcat 115  Q
    |||||||||||||||||||||||| | |||||||||||||          ||||||| |||  ||||||||||||||| |||| | ||||||||||||||    
T  925 aaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcat 1024  T
Q  116 tactca 121  Q
    ||||||    
T  1025 tactca 1030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 925 - 1030
Alignment:
Q  26 aaagagaaagtgtgcttgtgcggggtccacgtgactacgt----------tgtgtgggtgtacaagggtgtattgccatctaagggtgtctatgtatcat 115  Q
    |||||||||||||||||||||||| | |||||||||||||          ||||||| |||  ||||||||||||||| |||| | ||||||||||||||    
T  925 aaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcat 1024  T
Q  116 tactca 121  Q
    ||||||    
T  1025 tactca 1030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 10102 - 10144
Alignment:
Q  23 agaaaagagaaagtgtgcttgtgcggggtccacgtgactacgt 65  Q
    |||||||||||||||||||||| || |||||||||||||||||    
T  10102 agaaaagagaaagtgtgcttgtacgcggtccacgtgactacgt 10144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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