View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14484_high_21 (Length: 490)

Name: NF14484_high_21
Description: NF14484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14484_high_21
NF14484_high_21
[»] chr6 (13 HSPs)
chr6 (1-490)||(5685371-5685857)
chr6 (1-104)||(14936452-14936555)
chr6 (3-103)||(11572141-11572241)
chr6 (3-102)||(6330149-6330248)
chr6 (3-106)||(6068931-6069036)
chr6 (3-101)||(13853591-13853689)
chr6 (3-100)||(26602357-26602454)
chr6 (3-100)||(33052793-33052890)
chr6 (3-99)||(2830369-2830465)
chr6 (3-99)||(8382969-8383065)
chr6 (4-83)||(4251344-4251423)
chr6 (3-89)||(35031011-35031097)
chr6 (3-100)||(8099564-8099661)
[»] chr2 (21 HSPs)
chr2 (3-100)||(23227271-23227368)
chr2 (3-100)||(16243782-16243879)
chr2 (3-100)||(41492895-41492992)
chr2 (20-88)||(13952545-13952613)
chr2 (20-88)||(14093752-14093820)
chr2 (3-102)||(44398720-44398819)
chr2 (3-100)||(3055592-3055689)
chr2 (3-100)||(37990012-37990109)
chr2 (3-100)||(41478638-41478735)
chr2 (3-99)||(13197710-13197806)
chr2 (3-99)||(15372260-15372356)
chr2 (3-99)||(15896876-15896972)
chr2 (3-102)||(44397581-44397680)
chr2 (4-82)||(14740502-14740580)
chr2 (55-93)||(23986864-23986902)
chr2 (3-101)||(38917520-38917618)
chr2 (3-100)||(9047754-9047851)
chr2 (3-100)||(12170398-12170495)
chr2 (3-104)||(13724097-13724198)
chr2 (3-84)||(20900679-20900760)
chr2 (3-99)||(12337937-12338033)
[»] chr7 (16 HSPs)
chr7 (3-100)||(28469515-28469612)
chr7 (3-100)||(38063912-38064009)
chr7 (3-103)||(9268790-9268890)
chr7 (3-99)||(36016196-36016292)
chr7 (3-100)||(1738446-1738543)
chr7 (3-100)||(7240783-7240880)
chr7 (3-99)||(46840894-46840990)
chr7 (6-92)||(25018371-25018457)
chr7 (3-84)||(94333-94414)
chr7 (3-84)||(1565744-1565825)
chr7 (3-100)||(7482259-7482356)
chr7 (46-103)||(7661153-7661210)
chr7 (3-84)||(31319414-31319495)
chr7 (3-84)||(36583429-36583510)
chr7 (3-99)||(22285733-22285829)
chr7 (3-99)||(23314139-23314235)
[»] chr4 (17 HSPs)
chr4 (3-103)||(3993010-3993110)
chr4 (1-84)||(50430433-50430516)
chr4 (3-100)||(48336297-48336394)
chr4 (3-99)||(20538686-20538782)
chr4 (3-100)||(33621830-33621927)
chr4 (3-99)||(3372155-3372251)
chr4 (3-99)||(41615676-41615772)
chr4 (3-99)||(47833645-47833741)
chr4 (3-102)||(3904680-3904779)
chr4 (3-102)||(53337404-53337503)
chr4 (5-99)||(6121893-6121987)
chr4 (3-100)||(47838616-47838713)
chr4 (1-50)||(51531503-51531552)
chr4 (5-73)||(31013057-31013125)
chr4 (3-99)||(42797766-42797862)
chr4 (3-99)||(46797759-46797855)
chr4 (3-99)||(51894582-51894678)
[»] chr3 (18 HSPs)
chr3 (3-102)||(22721965-22722064)
chr3 (3-99)||(2787832-2787928)
chr3 (3-99)||(34080030-34080126)
chr3 (3-99)||(42170346-42170442)
chr3 (3-103)||(51406707-51406807)
chr3 (1-84)||(53275327-53275410)
chr3 (3-101)||(49823379-49823477)
chr3 (3-100)||(8817385-8817482)
chr3 (3-100)||(10298013-10298110)
chr3 (3-84)||(33942947-33943028)
chr3 (3-99)||(19557052-19557148)
chr3 (3-99)||(48340431-48340527)
chr3 (3-89)||(17653746-17653832)
chr3 (1-99)||(34988107-34988205)
chr3 (3-89)||(37508955-37509041)
chr3 (7-100)||(40690995-40691088)
chr3 (3-84)||(44785411-44785492)
chr3 (1-41)||(43323092-43323132)
[»] scaffold0482 (1 HSPs)
scaffold0482 (3-100)||(12894-12991)
[»] scaffold0204 (1 HSPs)
scaffold0204 (3-100)||(23819-23916)
[»] chr8 (17 HSPs)
chr8 (3-100)||(7805698-7805795)
chr8 (3-100)||(32114474-32114571)
chr8 (3-99)||(3304278-3304374)
chr8 (4-100)||(30171517-30171613)
chr8 (3-102)||(2890159-2890258)
chr8 (3-101)||(54610-54708)
chr8 (3-89)||(8587204-8587290)
chr8 (3-100)||(7785777-7785874)
chr8 (3-100)||(12763653-12763750)
chr8 (3-108)||(32211354-32211459)
chr8 (3-99)||(6552689-6552785)
chr8 (3-103)||(25600996-25601096)
chr8 (5-100)||(39571202-39571297)
chr8 (3-100)||(43199353-43199450)
chr8 (3-100)||(44498186-44498283)
chr8 (5-85)||(12300509-12300589)
chr8 (1-29)||(28463643-28463671)
[»] scaffold0464 (1 HSPs)
scaffold0464 (3-100)||(6130-6227)
[»] chr5 (9 HSPs)
chr5 (3-100)||(9395384-9395481)
chr5 (3-100)||(36563537-36563634)
chr5 (3-100)||(41989406-41989503)
chr5 (5-99)||(6126860-6126954)
chr5 (3-101)||(11795202-11795300)
chr5 (3-89)||(23359976-23360062)
chr5 (3-100)||(13103058-13103155)
chr5 (66-98)||(16619017-16619049)
chr5 (3-99)||(37148955-37149051)
[»] chr1 (12 HSPs)
chr1 (3-100)||(11897088-11897185)
chr1 (3-100)||(14984871-14984968)
chr1 (3-99)||(27159358-27159454)
chr1 (3-99)||(31842795-31842891)
chr1 (3-99)||(39401966-39402062)
chr1 (3-99)||(44668093-44668189)
chr1 (3-89)||(9981681-9981767)
chr1 (3-100)||(17556786-17556884)
chr1 (3-101)||(47216697-47216795)
chr1 (3-99)||(11795967-11796063)
chr1 (3-99)||(26471065-26471161)
chr1 (3-99)||(47777481-47777577)
[»] scaffold0171 (1 HSPs)
scaffold0171 (3-82)||(12370-12449)
[»] scaffold0650 (1 HSPs)
scaffold0650 (3-41)||(43-81)
[»] scaffold0009 (1 HSPs)
scaffold0009 (3-105)||(49539-49641)
[»] scaffold1707 (1 HSPs)
scaffold1707 (3-84)||(1369-1450)


Alignment Details
Target: chr6 (Bit Score: 419; Significance: 0; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 1 - 490
Target Start/End: Original strand, 5685371 - 5685857
Alignment:
Q  1 tgggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5685371 tgggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 5685470  T
Q  101 ataatattatagttgtaaactgcaacctgcagctgcaacttaacagttttagaggtctccacaacggcattggaatgacaattgtggctatattttccag 200  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  |||| |    
T  5685471 ataatattatagttgtaaattgcaatctgcagctgcaacttaacagttttagaggtctccacaacggcattggaatgacaattgcggctaca--ttcctg 5685568  T
Q  201 caaggctgcaatataaaggtttacagtataactgtgagtgcaatttaaaactatgattatgatatagtatagttctctaaatatggggatgattatgtca 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5685569 caaggctgcaatataaaggtttacagtataactgtgagtgcaatttgaaactatgattatgatatagtatagttctctaaatatggggatgattatgtca 5685668  T
Q  301 catatgtagtgacttaagcnnnnnnnntattgatacattattgctatgtttgtaattagtaatagatacaagaatattgttatcttagagattttctagt 400  Q
    |||||||||||||||||||        | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5685669 catatgtagtgacttaagcaaaaaaaatgttgatacattattgctatgtttgtaattagtaatagatacaagaatattgttatcttagagattttctagt 5685768  T
Q  401 aatttttgagtgtgtaatttctacccttgaattgctctataaatgtactattatgaatatatgagtgtgatatgaatattatttcaatac 490  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5685769 aatttttgagtgtgtaatttctacccttgaattgctctataaatgtactattatgaat-tatgagtgtgatatgaatattatttcaatac 5685857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 14936555 - 14936452
Alignment:
Q  1 tgggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    ||||||||||| |||||||||||||||| |||||| ||||| || |||||||  ||||| ||||| ||||||||||| || ||| ||||||| |||||||    
T  14936555 tgggtcaacaatagttgatgtatttggaacaaattcttaactagatacatcaccttttgttgacctaaatgtttcttctatataggaccagagggagtat 14936456  T
Q  101 ataa 104  Q
    ||||    
T  14936455 ataa 14936452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 11572241 - 11572141
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtatat 102  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||||    
T  11572241 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatat 11572142  T
Q  103 a 103  Q
    |    
T  11572141 a 11572141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 6330149 - 6330248
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtatat 102  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||||    
T  6330149 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatat 6330248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 6069036 - 6068931
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttct--tataaataagaccagatggagtat 100  Q
    |||||||||||||| |||||||||| | ||||| |||||  | ||| |||| ||||| ||||| |||| |||||  |||||||| || ||||||||||||    
T  6069036 ggtcaacaaaagttaatgtatttggtctaaatttttaactcgatacttcatcttttgttgacctaaatatttcttatataaataggatcagatggagtat 6068937  T
Q  101 ataata 106  Q
     |||||    
T  6068936 ttaata 6068931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 13853689 - 13853591
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtata 101  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||||    
T  13853689 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtata 13853591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 26602357 - 26602454
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  26602357 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 26602454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 33052890 - 33052793
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||  |||||||||  | ||||||||||| |||| ||||||||||    
T  33052890 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggatggagtat 33052793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 2830369 - 2830465
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  2830369 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 8383065 - 8382969
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  8383065 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 4251344 - 4251423
Alignment:
Q  4 gtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaat 83  Q
    ||||||||||||| | ||| |||  ||||||| ||||| || ||||||| |||||  ||||| |||||||||||||||||    
T  4251344 gtcaacaaaagttaacgtacttgatccaaattcttaactagatacatcacattttattgacctaaatgtttcttataaat 4251423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 35031097 - 35031011
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagacc 89  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| ||||    
T  35031097 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggacc 35031011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 8099564 - 8099661
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  |||||||||||   |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  8099564 ggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 8099661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 23227368 - 23227271
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    ||||||||||||||||||||||||| ||||||| |||   || ||||||| |||||| ||||| |||| ||||||||||||| ||||||| |||||||    
T  23227368 ggtcaacaaaagttgatgtatttggtccaaattcttagtcagatacatcacattttgttgacctaaatatttcttataaatatgaccagagggagtat 23227271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 16243879 - 16243782
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| ||||||||||    
T  16243879 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggatggagtat 16243782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 41492992 - 41492895
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||| | ||||||||||| |||| || |||||||    
T  41492992 ggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagtat 41492895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 13952613 - 13952545
Alignment:
Q  20 gtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagac 88  Q
    |||||| | ||||||| |||||||| || ||||||||||| | ||| ||||||||||||||||||||||    
T  13952613 gtatttagtccaaattcttaacaagataaatcatattttgttaacctaaatgtttcttataaataagac 13952545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 14093820 - 14093752
Alignment:
Q  20 gtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagac 88  Q
    |||||| | ||||||| |||||||| || ||||||||||| | ||| ||||||||||||||||||||||    
T  14093820 gtatttagtccaaattcttaacaagataaatcatattttgttaacctaaatgtttcttataaataagac 14093752  T

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Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 44398720 - 44398819
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtatat 102  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||||    
T  44398720 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatat 44398819  T

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Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 3055592 - 3055689
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  3055592 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 3055689  T

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Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 37990109 - 37990012
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  37990109 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 37990012  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 41478735 - 41478638
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  41478735 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 41478638  T

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Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 13197806 - 13197710
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  13197806 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

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Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 15372260 - 15372356
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  15372260 ggtcaacaaaagtgaatgtatttggactgaatttttaacgagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

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Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 15896876 - 15896972
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  15896876 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

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Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 44397581 - 44397680
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtatat 102  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| |  |||||||||    
T  44397581 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggggggagtatat 44397680  T

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Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 14740502 - 14740580
Alignment:
Q  4 gtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaa 82  Q
    ||||||||||| | |||||||| | ||||||| ||||| || ||||||| |||| | ||||  ||||||||||||||||    
T  14740502 gtcaacaaaaggtaatgtatttcgtccaaatttttaaccagatacatcacatttagttgacttaaatgtttcttataaa 14740580  T

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Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 23986864 - 23986902
Alignment:
Q  55 ttttgctgacccaaatgtttcttataaataagaccagat 93  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  23986864 ttttgttgactcaaatgtttcttataaataagaccagat 23986902  T

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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 38917618 - 38917520
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtata 101  Q
    |||||| ||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||||    
T  38917618 ggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtata 38917520  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 9047851 - 9047754
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||| ||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  9047851 ggtcaaaaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 9047754  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 12170495 - 12170398
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||| ||||||| ||||||||||||  |||| ||||| |  |||||||  ||||| |||||||| | | |||||||||||||| | |||| |||||    
T  12170495 ggtcaataaaagttaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaagtttctcttataaataagatcggatgaagtat 12170398  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 13724198 - 13724097
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtatat 102  Q
    ||||||||||||||||||||| ||| |||| || ||||| |  |||||||  ||||| ||||| | |||| |||| |||||| |||| || |||||| ||    
T  13724198 ggtcaacaaaagttgatgtatctggtccaattttttaaccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagtacat 13724099  T
Q  103 aa 104  Q
    ||    
T  13724098 aa 13724097  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 20900760 - 20900679
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaata 84  Q
    ||||||||||| |||| |||| |||  |||| | |  ||||| |||||||  |||||||||||||||||| |||||||||||    
T  20900760 ggtcaacaaaaattgacgtatctggttcaaaatttggacaagatacatcaacttttgctgacccaaatgtctcttataaata 20900679  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 12338033 - 12337937
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    ||||||||||| |  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  12338033 ggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

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Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 28469515 - 28469612
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||| ||||||  || ||||||||||||  || ||||||| |||||  ||||| ||||| |||||||||||| ||||||| |||||||    
T  28469515 ggtcaacaaaagttaatgtatcaggtccaaattattaatcagatacatcacattttattgacctaaatgattcttataaatatgaccagagggagtat 28469612  T

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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 38064009 - 38063912
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| ||||||| |||||||    
T  38064009 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccagagggagtat 38063912  T

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Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 9268790 - 9268890
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtatat 102  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||||    
T  9268790 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatat 9268889  T
Q  103 a 103  Q
    |    
T  9268890 a 9268890  T

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Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 36016292 - 36016196
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||  || |||||||  ||||| |||||||||  | ||||||||||| ||||||||||||||    
T  36016292 ggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccagatggagta 36016196  T

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Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 1738543 - 1738446
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  1738543 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 1738446  T

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Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 7240783 - 7240880
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  7240783 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 7240880  T

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Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 46840894 - 46840990
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  46840894 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 25018457 - 25018371
Alignment:
Q  6 caacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccaga 92  Q
    |||||||||||||||||||||| | | ||| ||||| || ||||| | |||||  ||||  |||||||||||| ||||| |||||||    
T  25018457 caacaaaagttgatgtatttggtcaacattcttaaccagatacataacattttattgacataaatgtttcttacaaataggaccaga 25018371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 94414 - 94333
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaata 84  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | |||||||||||    
T  94414 ggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 94333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 1565825 - 1565744
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaata 84  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | |||||||||||    
T  1565825 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 1565744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 7482259 - 7482356
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||| ||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  7482259 ggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 7482356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 7661153 - 7661210
Alignment:
Q  46 tacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtatata 103  Q
    |||||||  ||||| |||||||||||| || |||||||| ||||||| ||||||||||    
T  7661153 tacatcaacttttgttgacccaaatgtctcatataaataggaccagagggagtatata 7661210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 31319495 - 31319414
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaata 84  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | |||||||||||    
T  31319495 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 31319414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 36583429 - 36583510
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaata 84  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | |||||||||||    
T  36583429 ggtcaacaaaagtgaatgtatttggacttaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 36583510  T

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Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 22285733 - 22285829
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||  || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  22285733 ggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 23314235 - 23314139
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || || ||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  23314235 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 3993010 - 3993110
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtatat 102  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | |||||||||||||||| || |||||||||    
T  3993010 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataagaccggagggagtatat 3993109  T
Q  103 a 103  Q
    |    
T  3993110 a 3993110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 50430516 - 50430433
Alignment:
Q  1 tgggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaata 84  Q
    ||||||||||||||||||||||||||||   |||| ||||| || |||||||  ||||| |||||||||| | |||||||||||    
T  50430516 tgggtcaacaaaagttgatgtatttggattgaatttttaaccagatacatcaatttttgttgacccaaatatatcttataaata 50430433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 48336297 - 48336394
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  ||||||||||||| |||| || |||||||    
T  48336297 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtat 48336394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 20538782 - 20538686
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || ||||||| |||||| |||||||||  | ||||||||||| |||| || ||||||    
T  20538782 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaaattttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 33621830 - 33621927
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  33621830 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagtat 33621927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 3372155 - 3372251
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  3372155 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 41615772 - 41615676
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||| ||||||||||||  |||| ||||| |  |||||||  ||||| ||| |||| | | ||||||||||| |||| |||||||||    
T  41615772 ggtcaacaaaagttaatgtatttggacttaatttttaactaaatacatcaacttttgttgatccaattttctcttataaataggaccggatggagta 41615676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 47833645 - 47833741
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  47833645 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 3904779 - 3904680
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtatat 102  Q
    |||||||||||||  ||||||||||||  |||| ||||| |  |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||||    
T  3904779 ggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtatat 3904680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 53337404 - 53337503
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtatat 102  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||  |||||||||  | ||||||||||| |||| || |||||||||    
T  53337404 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtatat 53337503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 6121987 - 6121893
Alignment:
Q  5 tcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  6121987 tcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 47838713 - 47838616
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| ||||| |||  | ||||||||||| |||| || |||||||    
T  47838713 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtat 47838616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 51531503 - 51531552
Alignment:
Q  1 tgggtcaacaaaagttgatgtatttggaccaaattattaacaagttacat 50  Q
    ||||||||||||| ||||||||||||| ||||||| | |||||| |||||    
T  51531503 tgggtcaacaaaaattgatgtatttggtccaaattttgaacaagatacat 51531552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 31013057 - 31013125
Alignment:
Q  5 tcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtt 73  Q
    ||||||||||| |||||||||||   ||||| ||||| || |||||||| ||||| ||||| |||||||    
T  31013057 tcaacaaaagtagatgtatttggtttaaattcttaactagatacatcatcttttgttgacctaaatgtt 31013125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 42797766 - 42797862
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| ||||| |||  | ||||||||||| |||| || ||||||    
T  42797766 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 46797759 - 46797855
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || || ||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  46797759 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 51894678 - 51894582
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  |||| |||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  51894678 ggtcaacaaaagtgaatgtttttggactgaatttttaaccagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 22721965 - 22722064
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtatat 102  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| ||||||||||||    
T  22721965 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggatggagtatat 22722064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 2787928 - 2787832
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  |||||||||||||||  | ||||||||||| |||| || ||||||    
T  2787928 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 34080126 - 34080030
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| |||||||| |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  34080126 ggtcaacaaaagtgaatgtatttggactgaatttttaacaagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 42170442 - 42170346
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  |||||||||||   |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| ||||||||||||||    
T  42170442 ggtcaacaaaagtgaatgtatttggagtgaatttttaaccagatacatcaacttttgttgacccaaaattctcttataaataggaccagatggagta 42170346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 51406707 - 51406807
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtatat 102  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||||    
T  51406707 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtatat 51406806  T
Q  103 a 103  Q
    |    
T  51406807 a 51406807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 53275327 - 53275410
Alignment:
Q  1 tgggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaata 84  Q
    ||||||||||||| |||||||||||   ||||||| ||||  || |||||||||||||| |||||  ||| |||||||||||||    
T  53275327 tgggtcaacaaaaattgatgtatttaatccaaattcttaattagatacatcatattttgttgaccttaatatttcttataaata 53275410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 49823477 - 49823379
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtata 101  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||||    
T  49823477 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtata 49823379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 8817482 - 8817385
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  8817482 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaaggagtat 8817385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 10298013 - 10298110
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  10298013 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 10298110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 33943028 - 33942947
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaata 84  Q
    |||||||||||||| ||||||||||||  |||| ||||| || |||||||  ||||| |||||||| | | |||||||||||    
T  33943028 ggtcaacaaaagttaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctcttataaata 33942947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 19557148 - 19557052
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  19557148 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 48340431 - 48340527
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  48340431 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 17653746 - 17653832
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagacc 89  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| ||||    
T  17653746 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 17653832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 34988107 - 34988205
Alignment:
Q  1 tgggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    ||||||||||||||||||| ||| ||| |||  || ||||| || |||||||  | ||| |||| ||||| ||||||||||||| |||| || ||||||    
T  34988107 tgggtcaacaaaagttgatctatctggtccacttttttaactagatacatcaactattgttgactcaaatatttcttataaataggaccggagggagta 34988205  T

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Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 37508955 - 37509041
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagacc 89  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| ||||    
T  37508955 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 37509041  T

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Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 40691088 - 40690995
Alignment:
Q  7 aacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  40691088 aacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 40690995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 44785492 - 44785411
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaata 84  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | |||||||||||    
T  44785492 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 44785411  T

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Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 43323092 - 43323132
Alignment:
Q  1 tgggtcaacaaaagttgatgtatttggaccaaattattaac 41  Q
    ||||||||||||||||||||||||||||  ||||| |||||    
T  43323092 tgggtcaacaaaagttgatgtatttggattaaatttttaac 43323132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 12894 - 12991
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  |||||||||||||||  | ||||||||||| |||| || |||||||    
T  12894 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagtat 12991  T

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Target: scaffold0204 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 23819 - 23916
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  ||||||||||||| |||| || |||||||    
T  23819 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtat 23916  T

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Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 7805795 - 7805698
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  |||||||||||||||  | ||||||||||| |||| || |||||||    
T  7805795 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagtat 7805698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 32114571 - 32114474
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  ||||||||||||| |||| || |||||||    
T  32114571 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattttcttataaataggaccggagggagtat 32114474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 3304374 - 3304278
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  ||||||||||||| |||| || ||||||    
T  3304374 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 3304278  T

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Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 30171517 - 30171613
Alignment:
Q  4 gtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    ||||||||||||| ||||| |||| ||||||| ||||  || ||||||  |||||| ||||  |||||||||||||||||  ||||||| |||||||    
T  30171517 gtcaacaaaagttaatgtacttggtccaaattcttaatcagatacatcgcattttgttgacttaaatgtttcttataaatgggaccagacggagtat 30171613  T

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Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 2890258 - 2890159
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtatat 102  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||||    
T  2890258 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatat 2890159  T

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Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 54708 - 54610
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtata 101  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||||    
T  54708 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtata 54610  T

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Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 8587204 - 8587290
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagacc 89  Q
    ||||||||||||||||||||||| ||| ||||| ||||| || |||||||  ||||  |||| ||| | | ||||||||||||||||    
T  8587204 ggtcaacaaaagttgatgtattttgactaaatttttaactagatacatcaacttttattgactcaagtttctcttataaataagacc 8587290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 7785874 - 7785777
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  7785874 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 7785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 12763750 - 12763653
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  12763750 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagtat 12763653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 32211459 - 32211354
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtatat 102  Q
    ||||||||||| |  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||| |    
T  32211459 ggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtattt 32211360  T
Q  103 aatatt 108  Q
    ||||||    
T  32211359 aatatt 32211354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 6552689 - 6552785
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  6552689 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 25601096 - 25600996
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtatat 102  Q
    |||||||||||||  ||||||||||||  |||| ||||| || ||||| |  ||||| |||||||||  | ||||||||||| |||| || |||||||||    
T  25601096 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaaaattctcttataaataggaccggagggagtatat 25600997  T
Q  103 a 103  Q
    |    
T  25600996 a 25600996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 39571297 - 39571202
Alignment:
Q  5 tcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  39571297 tcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 39571202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 43199450 - 43199353
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| ||||| |||  | ||||||||||| |||| || |||||||    
T  43199450 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 44498283 - 44498186
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||  |||||||||  | ||||||||||| |||| || |||||||    
T  44498283 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtat 44498186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 12300589 - 12300509
Alignment:
Q  5 tcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataa 85  Q
    ||||||||||||||| |||||||  |||||| ||||  || ||||||| |||||| |||   |||||||||||| ||||||    
T  12300589 tcaacaaaagttgatctatttggttcaaattcttaatcagatacatcacattttgttgaaataaatgtttcttaaaaataa 12300509  T

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Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 28463643 - 28463671
Alignment:
Q  1 tgggtcaacaaaagttgatgtatttggac 29  Q
    |||||||||||||||||||||||||||||    
T  28463643 tgggtcaacaaaagttgatgtatttggac 28463671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 6227 - 6130
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  |||||| |||||  |||| ||||| || |||||||  ||||| |||||||||  ||||||||||||| |||| || |||||||    
T  6227 ggtcaacaaaagtgaatgtatgtggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtat 6130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000007; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 9395384 - 9395481
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  9395384 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 9395481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 36563634 - 36563537
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  36563634 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 36563537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 41989503 - 41989406
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  41989503 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 41989406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 6126860 - 6126954
Alignment:
Q  5 tcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    ||||||||| |  |||||||||||| ||||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  6126860 tcaacaaaaatgaatgtatttggactaaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 11795202 - 11795300
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtata 101  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||  || ||||||||    
T  11795202 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggactggagggagtata 11795300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 23359976 - 23360062
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagacc 89  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| ||||    
T  23359976 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 23360062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 13103058 - 13103155
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||  || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  13103058 ggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 13103155  T

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Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 16619049 - 16619017
Alignment:
Q  66 caaatgtttcttataaataagaccagatggagt 98  Q
    ||||| |||||||||||||||||||||||||||    
T  16619049 caaatttttcttataaataagaccagatggagt 16619017  T

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Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 37149051 - 37148955
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | | ||||||||| |||| || ||||||    
T  37149051 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000007; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 11897088 - 11897185
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    ||||||||||||||||||||| || ||  |||| |||||  | |||||||  ||||| |||||||||| | ||||||||||| |||| || |||||||    
T  11897088 ggtcaacaaaagttgatgtatctgaactgaatttttaaccggatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagtat 11897185  T

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Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 14984871 - 14984968
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||||    
T  14984871 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 14984968  T

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Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 27159454 - 27159358
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  27159454 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

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Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 31842891 - 31842795
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  31842891 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

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Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 39402062 - 39401966
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  39402062 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

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Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 44668189 - 44668093
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  44668189 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

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Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 9981681 - 9981767
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagacc 89  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| ||||    
T  9981681 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 9981767  T

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Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 17556786 - 17556884
Alignment:
Q  3 ggtcaacaaaagttga-tgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtat 100  Q
    |||||||||||||| | |||||||||||  |||| ||||| || |||||||  ||||| |||||||| | | ||||||||||| |||| || |||||||    
T  17556786 ggtcaacaaaagttaaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctcttataaataggaccggagggagtat 17556884  T

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Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 47216795 - 47216697
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtata 101  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | |||||||||||  ||| || ||||||||    
T  47216795 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagtaccggagggagtata 47216697  T

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Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 11795967 - 11796063
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||| ||||||||  |||| ||||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  11795967 ggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

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Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 26471161 - 26471065
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| ||| |||||  | ||||||||||| |||| || ||||||    
T  26471161 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

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Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 47777577 - 47777481
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagta 99  Q
    |||||||||||||  ||||||||||||  |||| | ||| || |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||||    
T  47777577 ggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 12449 - 12370
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaa 82  Q
    |||||| |||||||| ||| ||||| | ||||| ||||| || ||||||| |||||| |||||  |||||||||||||||    
T  12449 ggtcaaaaaaagttggtgtgtttggtctaaattcttaaccagatacatcacattttgttgacctgaatgtttcttataaa 12370  T

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Target: scaffold0650 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 81 - 43
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaac 41  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  81 ggtcaacaaaagttgatgtatttggactaaatttttaac 43  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 49539 - 49641
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggagtatat 102  Q
    |||||||||||||  ||||||||||||  |||| ||||| |  |||||||  ||||| |||||||||  | ||||||||||| |||| || |||||| ||    
T  49539 ggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaaat 49638  T
Q  103 aat 105  Q
    |||    
T  49639 aat 49641  T

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Target: scaffold1707 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 1369 - 1450
Alignment:
Q  3 ggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaata 84  Q
    |||||||||||||  ||||||||||||  |||| ||||| || |||||||  ||||| |||||||||  | |||||||||||    
T  1369 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 1450  T

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