View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14484_high_48 (Length: 325)
Name: NF14484_high_48
Description: NF14484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14484_high_48 |
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Alignment Details
Target: chr5 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 7 - 307
Target Start/End: Original strand, 8791869 - 8792169
Alignment:
| Q |
7 |
gtgagatgaatcaaacttttctcactattcatgaaattcggctacaagctatgtagaacgggaagttttatactttatactactttaattttatggtaca |
106 |
Q |
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| T |
8791869 |
gtgagatgaatcaaacttttctcactattcatgaaattcggctacaagctatgtagaatgggaagttttatactttatactactttaattttatggtaca |
8791968 |
T |
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| Q |
107 |
ggaatttgaaaagatgaaggagaaagcgcctgagaacttcaggctcgactttgctgtgagcagagaacaagtaaacgacaaaggagagaaaatgtacatt |
206 |
Q |
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| T |
8791969 |
ggaatttgaaaagatgaaggagaaagcgcctgagaacttcaggctcgactttgctgtgagcagagaacaagtaaacgacaaaggagagaaaatgtacatt |
8792068 |
T |
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| Q |
207 |
caaaccagaatggctcaatatgcagaagagttgtgggaattactgaagaaagacaacacttttgtttacatgtgtggactgaaaggaatggaaaagggaa |
306 |
Q |
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| T |
8792069 |
caaaccagaatggctcaatatgcagaagagttgtgggaattactgaagaaagacaacacttttgtttacatgtgtggactgaaaggaatggaaaagggaa |
8792168 |
T |
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| Q |
307 |
t |
307 |
Q |
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| T |
8792169 |
t |
8792169 |
T |
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