View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14484_high_55 (Length: 291)

Name: NF14484_high_55
Description: NF14484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14484_high_55
NF14484_high_55
[»] chr3 (38 HSPs)
chr3 (1-282)||(10464727-10465008)
chr3 (1-62)||(20080076-20080138)
chr3 (1-62)||(8846494-8846556)
chr3 (1-62)||(24095412-24095474)
chr3 (1-62)||(55400002-55400064)
chr3 (1-38)||(6178432-6178469)
chr3 (3-36)||(40367638-40367671)
chr3 (1-38)||(42358645-42358682)
chr3 (2-62)||(20547998-20548058)
chr3 (1-64)||(49167751-49167815)
chr3 (5-67)||(30863086-30863149)
chr3 (1-64)||(41505492-41505555)
chr3 (1-36)||(45711446-45711481)
chr3 (3-62)||(46852140-46852199)
chr3 (1-39)||(3953481-3953519)
chr3 (1-39)||(10811162-10811200)
chr3 (1-67)||(26014810-26014876)
chr3 (1-62)||(26996319-26996381)
chr3 (2-67)||(34057960-34058026)
chr3 (1-62)||(37927211-37927273)
chr3 (1-67)||(38671616-38671682)
chr3 (1-62)||(43904976-43905038)
chr3 (1-62)||(44677490-44677552)
chr3 (1-39)||(49417602-49417640)
chr3 (5-39)||(51343435-51343469)
chr3 (1-62)||(5244232-5244293)
chr3 (1-62)||(7668194-7668255)
chr3 (1-62)||(27541509-27541570)
chr3 (3-36)||(33796296-33796329)
chr3 (1-62)||(35597165-35597226)
chr3 (1-62)||(36671021-36671082)
chr3 (1-38)||(41443197-41443234)
chr3 (1-30)||(49196731-49196760)
chr3 (5-38)||(50559222-50559255)
chr3 (4-36)||(31931028-31931060)
chr3 (4-36)||(33389038-33389070)
chr3 (7-35)||(43143547-43143575)
chr3 (1-37)||(46019491-46019527)
[»] chr5 (26 HSPs)
chr5 (1-77)||(32912026-32912103)
chr5 (1-62)||(19839992-19840054)
chr5 (1-62)||(22649668-22649729)
chr5 (1-68)||(6517709-6517777)
chr5 (2-62)||(18660762-18660822)
chr5 (3-62)||(7076577-7076636)
chr5 (1-62)||(34124624-34124686)
chr5 (1-34)||(34379485-34379518)
chr5 (1-68)||(21064232-21064300)
chr5 (1-62)||(189709-189771)
chr5 (1-67)||(1764222-1764288)
chr5 (1-62)||(8267826-8267888)
chr5 (1-62)||(8920081-8920143)
chr5 (1-62)||(10649438-10649500)
chr5 (1-62)||(19481188-19481250)
chr5 (1-39)||(38363108-38363146)
chr5 (1-38)||(611892-611929)
chr5 (1-62)||(1079959-1080020)
chr5 (1-34)||(6940156-6940189)
chr5 (1-65)||(9581579-9581644)
chr5 (1-34)||(11954463-11954496)
chr5 (1-34)||(14532536-14532569)
chr5 (1-38)||(20770159-20770196)
chr5 (1-34)||(40829446-40829479)
chr5 (1-37)||(6446524-6446560)
chr5 (1-65)||(19522010-19522074)
[»] chr7 (31 HSPs)
chr7 (1-62)||(3343336-3343398)
chr7 (1-68)||(34978293-34978361)
chr7 (3-62)||(46773650-46773710)
chr7 (1-62)||(33180716-33180778)
chr7 (1-62)||(13152596-13152657)
chr7 (1-34)||(18111618-18111651)
chr7 (1-62)||(31844611-31844672)
chr7 (3-62)||(34757476-34757536)
chr7 (1-36)||(6269396-6269431)
chr7 (7-38)||(30061309-30061340)
chr7 (1-36)||(34108861-34108896)
chr7 (1-36)||(40854661-40854696)
chr7 (1-36)||(44496809-44496844)
chr7 (1-36)||(46829509-46829544)
chr7 (1-62)||(35586779-35586841)
chr7 (5-62)||(37808774-37808832)
chr7 (5-62)||(37899223-37899281)
chr7 (1-62)||(41893918-41893980)
chr7 (1-38)||(10055638-10055675)
chr7 (1-38)||(12007192-12007229)
chr7 (1-34)||(24532949-24532982)
chr7 (1-34)||(29723933-29723966)
chr7 (1-62)||(30941389-30941450)
chr7 (1-38)||(31675062-31675099)
chr7 (1-34)||(35452579-35452612)
chr7 (1-38)||(43807819-43807856)
chr7 (1-34)||(47145079-47145112)
chr7 (1-38)||(47448854-47448891)
chr7 (6-34)||(8904418-8904446)
chr7 (1-68)||(39331982-39332050)
chr7 (1-37)||(44184565-44184601)
[»] chr6 (24 HSPs)
chr6 (1-62)||(2689070-2689132)
chr6 (1-62)||(24842371-24842433)
chr6 (1-62)||(5570340-5570401)
chr6 (1-62)||(2242028-2242090)
chr6 (1-66)||(5522644-5522710)
chr6 (1-62)||(18141307-18141369)
chr6 (1-62)||(20822874-20822936)
chr6 (1-39)||(34442069-34442107)
chr6 (3-67)||(23628358-23628423)
chr6 (1-65)||(30152536-30152601)
chr6 (1-36)||(13422998-13423033)
chr6 (1-68)||(25811845-25811912)
chr6 (1-62)||(3198963-3199025)
chr6 (1-62)||(11547535-11547597)
chr6 (2-36)||(14817961-14817995)
chr6 (1-62)||(32459523-32459585)
chr6 (1-67)||(34047385-34047451)
chr6 (1-38)||(8645336-8645373)
chr6 (1-34)||(28630130-28630163)
chr6 (3-36)||(33635909-33635942)
chr6 (1-68)||(11635541-11635609)
chr6 (1-60)||(13143388-13143448)
chr6 (2-34)||(17182131-17182163)
chr6 (8-36)||(25142564-25142592)
[»] chr4 (36 HSPs)
chr4 (1-67)||(7627846-7627913)
chr4 (1-62)||(40348797-40348858)
chr4 (7-62)||(50050641-50050696)
chr4 (1-62)||(33860650-33860712)
chr4 (1-66)||(38519792-38519858)
chr4 (1-39)||(56557760-56557798)
chr4 (1-62)||(2268514-2268575)
chr4 (1-62)||(37297052-37297113)
chr4 (1-68)||(439266-439334)
chr4 (4-67)||(47240815-47240879)
chr4 (1-67)||(149491-149558)
chr4 (5-67)||(14443196-14443259)
chr4 (1-36)||(44257736-44257771)
chr4 (3-62)||(45082984-45083043)
chr4 (1-36)||(56474770-56474805)
chr4 (1-62)||(13139151-13139213)
chr4 (1-62)||(21617186-21617248)
chr4 (1-39)||(30170026-30170064)
chr4 (1-62)||(39158108-39158170)
chr4 (1-62)||(40609613-40609675)
chr4 (1-38)||(336814-336851)
chr4 (1-30)||(1580290-1580319)
chr4 (2-62)||(4915680-4915741)
chr4 (1-38)||(5932770-5932807)
chr4 (3-32)||(22027450-22027479)
chr4 (1-38)||(28458383-28458420)
chr4 (1-62)||(29175230-29175291)
chr4 (1-38)||(31574946-31574983)
chr4 (1-62)||(46634103-46634164)
chr4 (1-38)||(50890080-50890117)
chr4 (1-38)||(51255774-51255811)
chr4 (7-62)||(9362690-9362746)
chr4 (1-29)||(31559575-31559603)
chr4 (1-37)||(38338928-38338964)
chr4 (4-36)||(47288112-47288144)
chr4 (4-36)||(48649548-48649580)
[»] chr8 (29 HSPs)
chr8 (1-62)||(5864206-5864268)
chr8 (1-62)||(41600312-41600374)
chr8 (1-62)||(45529252-45529314)
chr8 (1-65)||(9549205-9549270)
chr8 (1-65)||(44825443-44825507)
chr8 (1-62)||(9208069-9208131)
chr8 (1-62)||(31596951-31597013)
chr8 (1-38)||(6991814-6991851)
chr8 (3-39)||(12735020-12735056)
chr8 (1-36)||(18651400-18651435)
chr8 (1-62)||(3946243-3946305)
chr8 (1-62)||(11017808-11017870)
chr8 (1-38)||(5600993-5601030)
chr8 (1-38)||(5639590-5639627)
chr8 (1-30)||(7678767-7678796)
chr8 (1-62)||(10692442-10692503)
chr8 (2-62)||(12707152-12707213)
chr8 (1-62)||(22719443-22719504)
chr8 (1-62)||(27325761-27325822)
chr8 (1-34)||(28756567-28756600)
chr8 (1-62)||(31249531-31249592)
chr8 (1-62)||(32501203-32501264)
chr8 (1-38)||(33451569-33451606)
chr8 (1-38)||(34435743-34435780)
chr8 (2-62)||(36426027-36426088)
chr8 (1-38)||(39359764-39359800)
chr8 (1-72)||(1633896-1633968)
chr8 (11-62)||(12783769-12783821)
chr8 (1-37)||(41159895-41159931)
[»] chr2 (41 HSPs)
chr2 (1-62)||(22888828-22888889)
chr2 (1-62)||(41195587-41195648)
chr2 (3-62)||(7648395-7648454)
chr2 (1-62)||(433853-433915)
chr2 (1-62)||(6999074-6999136)
chr2 (1-39)||(11385020-11385058)
chr2 (1-62)||(9207593-9207654)
chr2 (3-62)||(13765403-13765463)
chr2 (1-37)||(25881573-25881609)
chr2 (7-62)||(30546381-30546437)
chr2 (1-36)||(4384084-4384119)
chr2 (3-38)||(7502436-7502471)
chr2 (1-64)||(8848702-8848765)
chr2 (4-62)||(44254602-44254661)
chr2 (5-62)||(2563707-2563765)
chr2 (7-62)||(7552557-7552614)
chr2 (1-62)||(9634442-9634504)
chr2 (1-31)||(10711759-10711789)
chr2 (1-39)||(14255329-14255367)
chr2 (1-62)||(15269864-15269926)
chr2 (1-62)||(18723597-18723659)
chr2 (1-39)||(38821393-38821431)
chr2 (1-31)||(42607537-42607567)
chr2 (1-38)||(2221021-2221058)
chr2 (3-62)||(4061969-4062027)
chr2 (2-39)||(6170657-6170694)
chr2 (1-38)||(6895923-6895960)
chr2 (5-38)||(8427580-8427613)
chr2 (1-38)||(14876985-14877022)
chr2 (1-62)||(18254216-18254277)
chr2 (1-34)||(21738622-21738655)
chr2 (2-62)||(29684619-29684680)
chr2 (1-38)||(31922299-31922336)
chr2 (7-63)||(32869828-32869885)
chr2 (1-62)||(34945097-34945158)
chr2 (1-38)||(37731206-37731243)
chr2 (1-34)||(40210074-40210107)
chr2 (2-34)||(12784406-12784438)
chr2 (1-37)||(28245757-28245793)
chr2 (1-62)||(31389549-31389612)
chr2 (1-33)||(37003643-37003675)
[»] chr1 (40 HSPs)
chr1 (1-62)||(46172413-46172474)
chr1 (1-61)||(47215735-47215796)
chr1 (1-41)||(52267228-52267268)
chr1 (1-62)||(10890052-10890114)
chr1 (1-62)||(13489665-13489727)
chr1 (1-62)||(15705068-15705130)
chr1 (1-62)||(51286373-51286435)
chr1 (1-62)||(52362485-52362547)
chr1 (1-34)||(8846005-8846038)
chr1 (5-62)||(15083061-15083118)
chr1 (1-38)||(50775163-50775200)
chr1 (1-36)||(1689421-1689456)
chr1 (1-36)||(30536021-30536056)
chr1 (1-68)||(37685328-37685395)
chr1 (1-68)||(37700123-37700190)
chr1 (3-34)||(50824773-50824804)
chr1 (1-62)||(5771754-5771816)
chr1 (1-62)||(7171242-7171304)
chr1 (1-62)||(16986941-16987003)
chr1 (9-62)||(26967213-26967267)
chr1 (1-39)||(32915078-32915116)
chr1 (1-62)||(34254357-34254419)
chr1 (1-62)||(46543448-46543510)
chr1 (1-39)||(47214235-47214273)
chr1 (1-62)||(8350203-8350264)
chr1 (1-38)||(9566967-9567004)
chr1 (1-62)||(12657225-12657286)
chr1 (1-66)||(29359638-29359703)
chr1 (1-62)||(35369703-35369764)
chr1 (1-34)||(40328747-40328780)
chr1 (5-62)||(45333573-45333630)
chr1 (1-34)||(46281468-46281501)
chr1 (1-30)||(48470674-48470703)
chr1 (1-38)||(48858851-48858888)
chr1 (1-38)||(48983674-48983711)
chr1 (1-34)||(52437526-52437559)
chr1 (2-62)||(52714908-52714969)
chr1 (1-68)||(3603108-3603176)
chr1 (1-64)||(29585994-29586058)
chr1 (1-37)||(51436778-51436814)
[»] scaffold0174 (1 HSPs)
scaffold0174 (1-67)||(34800-34867)
[»] scaffold0199 (1 HSPs)
scaffold0199 (3-65)||(8668-8730)
[»] scaffold0136 (1 HSPs)
scaffold0136 (2-62)||(38428-38489)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-38)||(10964-11001)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-38)||(41783-41820)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-38)||(101912-101949)
[»] scaffold0532 (1 HSPs)
scaffold0532 (1-37)||(10993-11029)
[»] scaffold0276 (1 HSPs)
scaffold0276 (4-36)||(1674-1706)


Alignment Details
Target: chr3 (Bit Score: 274; Significance: 1e-153; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 10465008 - 10464727
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcatttttcattaaatttagctctgtagttgatgacgctagaaa 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10465008 tgtgagtatgagagagaaaattgtcacaaaaattttcattgatgaatgttcaaatatcatttttcattaaatttagctctgtagttgatgacgctagaaa 10464909  T
Q  101 gtagatttttgaggtgtcttcatatgcttaaaccagggatggcatgatctacggtatcagcgatccatagtctcattgttgatgtctattagccctcttg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10464908 gtagatttttgaggtgtcttcatatgcttaaaccagggatggcatgatctacggtatcagcgatccatagtctcattgttcatgtctattagccctcttg 10464809  T
Q  201 gttaggttgacacgtggacagaagaggacagcaagttaattggtcaatttacatggctgcattatgtgttttttagaataat 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10464808 gttaggttgacacgtggacagaagaggacagcaagttaattggtcaatttacatggctgcattatgtgttttttagaataat 10464727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20080138 - 20080076
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||||||||||||  ||| ||||||||||| |||||    
T  20080138 tgtgagtatgagagagaaagttgtcacaaaaattgtcattaaatggatgttcaaataccattt 20080076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8846556 - 8846494
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattg-atgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||||||||||||||| |||| || | ||  |||||||||||||||||    
T  8846556 tgtgagtatgagagagaaaattgtcacaaaagttgttatcgaatagatgttcaaatatcattt 8846494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24095412 - 24095474
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| |||||||||||||| ||||   ||| |||||||||||||||||    
T  24095412 tgtgagtatgagagagaaagttgtcacaaaaattatcataaaatggatgttcaaatatcattt 24095474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 55400064 - 55400002
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| |||||||   ||| |||||||||||||||||    
T  55400064 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcattt 55400002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6178432 - 6178469
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  6178432 tgtgagtatgagagagaaaattgtcacaaaagttgtca 6178469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 40367671 - 40367638
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    ||||||||||||||||||||||||||||||||||    
T  40367671 tgagtatgagagagaaaattgtcacaaaaattgt 40367638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42358645 - 42358682
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  42358645 tgtgagtatgagagagaaagttgtcacaaaaattgtca 42358682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 20547998 - 20548058
Alignment:
Q  2 gtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||||||||||||||| |||| |    ||| ||||||||||||||||    
T  20547998 gtgagtatgagagagaaaattgtcacaaaagttgtaaaaactgattgttcaaatatcattt 20548058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 49167815 - 49167751
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattttt 64  Q
    |||| |||||||||||||| ||||||||||| |||||||   ||| |||||||||||||||||||    
T  49167815 tgtgtgtatgagagagaaagttgtcacaaaagttgtcatcaaatggatgttcaaatatcattttt 49167751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 30863086 - 30863149
Alignment:
Q  5 agtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcatttttcat 67  Q
    ||||||||||||||| |||||||||||||| ||||   ||| ||||||||||||||||| ||||    
T  30863086 agtatgagagagaaagttgtcacaaaaattatcatcaaatggatgttcaaatatcatttctcat 30863149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41505555 - 41505492
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattttt 64  Q
    ||||||||||||||||||| ||||||||||| |||| |   || | ||||||||||||||||||    
T  41505555 tgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaataattgttcaaatatcattttt 41505492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 45711446 - 45711481
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    ||||||||||||||||||||||||||||||| ||||    
T  45711446 tgtgagtatgagagagaaaattgtcacaaaagttgt 45711481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 46852140 - 46852199
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||| |||||||||||  | ||||  ||| |||||||||||||||||    
T  46852140 tgagtatgagagagaaagttgtcacaaaagctatcataaatggatgttcaaatatcattt 46852199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3953481 - 3953519
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat 39  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  3953481 tgtgagtatgagagagaaagttgtcacaaaaattatcat 3953519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10811200 - 10811162
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat 39  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  10811200 tgtgagtatgagagagaaagttgtcacaaaagttgtcat 10811162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 26014876 - 26014810
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcatttttcat 67  Q
    ||||||||||||||||||| ||||||||||| |||| |   |||  |||||||||||||||| ||||    
T  26014876 tgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttctcat 26014810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26996381 - 26996319
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| |||| |||||| |||| | |  |||||||||||||||||||||    
T  26996381 tgtgagtatgagagagaaagttgttacaaaagttgttactaaatgaatgttcaaatatcattt 26996319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 34057960 - 34058026
Alignment:
Q  2 gtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcatttttcat 67  Q
    |||||||||||||||||| ||||||||||| || ||||   ||| ||||||||||||||||| ||||    
T  34057960 gtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaatatcatttctcat 34058026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37927211 - 37927273
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| ||||||    ||| |||||||||||||||||    
T  37927211 tgtgagtatgagagagaaagttgtcacaaaagttgtcaccaaatggatgttcaaatatcattt 37927273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 38671682 - 38671616
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcatttttcat 67  Q
    |||||||| ||||||||||||||||||||||||| | |   |||  |||||||||||||||| ||||    
T  38671682 tgtgagtacgagagagaaaattgtcacaaaaattataaaaaatggttgttcaaatatcatttctcat 38671616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43905038 - 43904976
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| |||| ||||||||| ||| |  ||| |||||||||||||||||    
T  43905038 tgtgagtatgagagagaaagttgttacaaaaattatcactaaatggatgttcaaatatcattt 43904976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44677490 - 44677552
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||||||||  ||||| |||||| |  ||| |||||||||||||||||    
T  44677490 tgtgagtatgagagagaaaattgttgcaaaagttgtcactaaatggatgttcaaatatcattt 44677552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 49417640 - 49417602
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat 39  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  49417640 tgtgagtatgagagagaaagttgtcacaaaagttgtcat 49417602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 51343469 - 51343435
Alignment:
Q  5 agtatgagagagaaaattgtcacaaaaattgtcat 39  Q
    ||||||||||||||||||||||||||| |||||||    
T  51343469 agtatgagagagaaaattgtcacaaaagttgtcat 51343435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5244293 - 5244232
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| |||| |   |||  ||||||||||||||||    
T  5244293 tgtgagtatgagagagaaagttgtcacaaaagttgtaaaatatggttgttcaaatatcattt 5244232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7668194 - 7668255
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||| |||||||||||||||| |||| |||| |   |||| ||||||||||||||||    
T  7668194 tgtgagtataagagagaaaattgtcaaaaaagttgtaaaaaatgattgttcaaatatcattt 7668255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27541509 - 27541570
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||||||||||| ||| |||| |   |||  ||||||||||||||||    
T  27541509 tgtgagtatgagagagaaaattgtcactaaagttgtaaaaaatggttgttcaaatatcattt 27541570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 33796329 - 33796296
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    ||||||||||||||||| ||||||||||||||||    
T  33796329 tgagtatgagagagaaagttgtcacaaaaattgt 33796296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 35597226 - 35597165
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||| |||||||| |   |||  ||||||||||||||||    
T  35597226 tgtgagtatgagagagaaagttgtcactaaaattgtaaaaaatgtttgttcaaatatcattt 35597165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36671021 - 36671082
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||| ||| |||||||||||||||| |   |||  ||||||||||||||||    
T  36671021 tgtgagtatgagagaaaaagttgtcacaaaaattgtaaaaaatggttgttcaaatatcattt 36671082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 41443197 - 41443234
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  41443197 tgtgagtatgagagagaaaattatcacaaaagttgtca 41443234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 49196760 - 49196731
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  49196760 tgtgagtatgagagagaaaattgtcacaaa 49196731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 50559222 - 50559255
Alignment:
Q  5 agtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||||||||||| ||||||    
T  50559222 agtatgagagagaaaattgtcacaaaagttgtca 50559255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 31931028 - 31931060
Alignment:
Q  4 gagtatgagagagaaaattgtcacaaaaattgt 36  Q
    |||||||||||||||||||||||||||| ||||    
T  31931028 gagtatgagagagaaaattgtcacaaaagttgt 31931060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 33389070 - 33389038
Alignment:
Q  4 gagtatgagagagaaaattgtcacaaaaattgt 36  Q
    |||||||||||||||| ||||||||||||||||    
T  33389070 gagtatgagagagaaagttgtcacaaaaattgt 33389038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 43143575 - 43143547
Alignment:
Q  7 tatgagagagaaaattgtcacaaaaattg 35  Q
    |||||||||||||||||||||||||||||    
T  43143575 tatgagagagaaaattgtcacaaaaattg 43143547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 46019527 - 46019491
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtc 37  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  46019527 tgtgagtatgagagagaaagttgtcacaaaagttgtc 46019491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 32912103 - 32912026
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcatttttcattaaatttagc 77  Q
    |||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||| || |||||| ||||    
T  32912103 tgtgagtatgagagagaaaattgtcacaaaaattatcataaaatgaatgttcaaatatcatttctctttaaatatagc 32912026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19839992 - 19840054
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| |||||||||||||||||||   |||||||||||||||||||||    
T  19839992 tgtgagtatgagagagaaagttgtcacaaaaattgtcataaaatgaatgttcaaatatcattt 19840054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22649668 - 22649729
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||||||||||||||||||||| |   |||  ||||||||||||||||    
T  22649668 tgtgagtatgagagagaaaattgtcacaaaaattgtaaaaaatggttgttcaaatatcattt 22649729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6517777 - 6517709
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcatttttcatt 68  Q
    ||||||||||||||||||| ||||||||||| |||||||   ||| ||||||||||||||||| |||||    
T  6517777 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctcatt 6517709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 18660822 - 18660762
Alignment:
Q  2 gtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||||||||||||||| ||||||   |||  ||||||||||||||||    
T  18660822 gtgagtatgagagagaaaattgtcacaaaagttgtcaaaaatggttgttcaaatatcattt 18660762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 7076577 - 7076636
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||||||||||||||||| | |   |||| ||||||||||||||||    
T  7076577 tgagtatgagagagaaaattgtcacaaaaattataaaaaatgattgttcaaatatcattt 7076636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34124686 - 34124624
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||||||| ||||||||||| ||||   ||| |||||||||||||||||    
T  34124686 tgtgagtatgagagagaaaattatcacaaaaattatcataaaatggatgttcaaatatcattt 34124624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 34379518 - 34379485
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  34379518 tgtgagtatgagagagaaaattgtcacaaaaatt 34379485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 21064232 - 21064300
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattga-tgaatgttcaaatatcatttttcatt 68  Q
    ||||||||||||||||||| ||||  ||||| |||||| | | |||||||||||||||||||| |||||    
T  21064232 tgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatgaatgttcaaatatcatttctcatt 21064300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 189709 - 189771
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| || ||||   ||| |||||||||||||||||    
T  189709 tgtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaatatcattt 189771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1764288 - 1764222
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcatttttcat 67  Q
    ||||||||||||||||||| |||||||| || |||| |   |||| |||||||||||||||| ||||    
T  1764288 tgtgagtatgagagagaaagttgtcacagaagttgtaaaaaatgattgttcaaatatcatttctcat 1764222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8267826 - 8267888
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||  |||||||||||| |  ||| |||||||||||||||||    
T  8267826 tgtgagtatgagagagaaagttgttgcaaaaattgtcactaaatggatgttcaaatatcattt 8267888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8920143 - 8920081
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| ||||||    ||| |||||||||||||||||    
T  8920143 tgtgagtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcattt 8920081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10649500 - 10649438
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||| ||||||| ||||||||||| |||||||   ||| |||||||||||||||||    
T  10649500 tgtgagtatgaaagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcattt 10649438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19481188 - 19481250
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| || ||||   ||| |||||||||||||||||    
T  19481188 tgtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaatatcattt 19481250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38363146 - 38363108
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat 39  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  38363146 tgtgagtatgagagagaaaattatcacaaaaattatcat 38363108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 611929 - 611892
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  611929 tgtgagtatgagagagaaagttgtcacaaaagttgtca 611892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1079959 - 1080020
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||| ||||||||||||| |||||||||||||||| |   || | ||||||||||||||||    
T  1079959 tgtgaatatgagagagaaagttgtcacaaaaattgtaaaaaataattgttcaaatatcattt 1080020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 6940156 - 6940189
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||||||||||||||| ||||||||||||||    
T  6940156 tgtgagtatgagagagaaagttgtcacaaaaatt 6940189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9581644 - 9581579
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcatttttc 65  Q
    ||||||||||| ||||||| ||||||||||| || ||| |  ||| ||||||||||||||||||||    
T  9581644 tgtgagtatgaaagagaaagttgtcacaaaagttatcactaaatggatgttcaaatatcatttttc 9581579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 11954496 - 11954463
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||||||||||||||| ||||||||||||||    
T  11954496 tgtgagtatgagagagaaagttgtcacaaaaatt 11954463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 14532569 - 14532536
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||||||||||||||| ||||||||||||||    
T  14532569 tgtgagtatgagagagaaagttgtcacaaaaatt 14532536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20770196 - 20770159
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  20770196 tgtgagtatgagagagaaagttgtcacaaaagttgtca 20770159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40829479 - 40829446
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  40829479 tgtgagtatgagagaaaaaattgtcacaaaaatt 40829446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 6446524 - 6446560
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtc 37  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  6446524 tgtgagtatgagagagaaagttgtcacaaaagttgtc 6446560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19522010 - 19522074
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcatttttc 65  Q
    ||||||||||| ||||||| ||||||||||| |||| |   |||  |||||||||||||||||||    
T  19522010 tgtgagtatgaaagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttttc 19522074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3343336 - 3343398
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||| |||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  3343336 tgtgaatatgagagagaaaattgtcacaaaaattgtcataaaatgaatgttcaaatatcattt 3343398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34978361 - 34978293
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattga-tgaatgttcaaatatcatttttcatt 68  Q
    ||||||||||||||||||| ||||||||||||||||||   | ||| |||||||||||||||| |||||    
T  34978361 tgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaagtgattgttcaaatatcatttctcatt 34978293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 46773650 - 46773710
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaattgtcattg-atgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||||||  |||||||||||| || ||| |||||||||||||||||    
T  46773650 tgagtatgagagagaaaattgttgcaaaaattgtcactgaatggatgttcaaatatcattt 46773710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33180716 - 33180778
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||||||||||| |||| ||||||    |||||||||||||||||||||    
T  33180716 tgtgagtatgagagagaaaattgtcataaaagttgtcacaaaatgaatgttcaaatatcattt 33180778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13152657 - 13152596
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| ||||||   |||  ||||||||||||||||    
T  13152657 tgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaatggttgttcaaatatcattt 13152596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 18111618 - 18111651
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  18111618 tgtgagtatgagagagaaaattgtcacaaaaatt 18111651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31844611 - 31844672
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||| | |||||||||||||| |||||||||||   ||| |||||||||||||||||    
T  31844611 tgtgagtataaaagagaaaattgtcataaaaattgtcacaaatggatgttcaaatatcattt 31844672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 34757476 - 34757536
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcattt 62  Q
    ||||||||||||||| | ||||||||||| ||||| || |||| |||||||||||||||||    
T  34757476 tgagtatgagagagagagttgtcacaaaagttgtcgttagatggatgttcaaatatcattt 34757536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 6269431 - 6269396
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    ||||||||||||||||||| ||||||||||||||||    
T  6269431 tgtgagtatgagagagaaagttgtcacaaaaattgt 6269396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 38
Target Start/End: Complemental strand, 30061340 - 30061309
Alignment:
Q  7 tatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||||||||||||||||    
T  30061340 tatgagagagaaaattgtcacaaaaattgtca 30061309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 34108861 - 34108896
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    ||||||||||||||||||||||||||||||| ||||    
T  34108861 tgtgagtatgagagagaaaattgtcacaaaagttgt 34108896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 40854661 - 40854696
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    ||||||||||||||||||||||||||||||| ||||    
T  40854661 tgtgagtatgagagagaaaattgtcacaaaagttgt 40854696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 44496809 - 44496844
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    ||||||||||||||||||| ||||||||||||||||    
T  44496809 tgtgagtatgagagagaaagttgtcacaaaaattgt 44496844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 46829544 - 46829509
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    ||||||||||||||||||| ||||||||||||||||    
T  46829544 tgtgagtatgagagagaaagttgtcacaaaaattgt 46829509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35586779 - 35586841
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| || ||||   ||| |||||||||||||||||    
T  35586779 tgtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaatatcattt 35586841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 37808774 - 37808832
Alignment:
Q  5 agtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||||  |||||||||||| |  ||| |||||||||||||||||    
T  37808774 agtatgagagagaaaattgttgcaaaaattgtcactaaatggatgttcaaatatcattt 37808832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 37899223 - 37899281
Alignment:
Q  5 agtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||| ||||||||||||||||||    ||| |||||||||||||||||    
T  37899223 agtatgagagagaaagttgtcacaaaaattgtcacaaaatggatgttcaaatatcattt 37899281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41893980 - 41893918
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||| ||||||| ||||||||||| |||||||   ||| |||||||||||||||||    
T  41893980 tgtgagtatgaaagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcattt 41893918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10055638 - 10055675
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  10055638 tgtgagtatgagaaagaaaattgccacaaaaattgtca 10055675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12007192 - 12007229
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  12007192 tgtgagtatgagagagaaagttgtcacaaaagttgtca 12007229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 24532949 - 24532982
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  24532949 tgtgagtatgagagaaaaaattgtcacaaaaatt 24532982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29723933 - 29723966
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||||||||||||||| ||||||||||||||    
T  29723933 tgtgagtatgagagagaaagttgtcacaaaaatt 29723966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30941450 - 30941389
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| |||| |   |||  ||||||||||||||||    
T  30941450 tgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcattt 30941389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31675062 - 31675099
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  31675062 tgtgagtatgagagtgaaaattgtcacaaaagttgtca 31675099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 35452579 - 35452612
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||||||||||||||| ||||||||||||||    
T  35452579 tgtgagtatgagagagaaagttgtcacaaaaatt 35452612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 43807819 - 43807856
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  43807819 tgtgagtatgagagaaaaaattgtcataaaaattgtca 43807856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 47145079 - 47145112
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||| ||||||||||||||||||||||||||    
T  47145079 tgtgagtgtgagagagaaaattgtcacaaaaatt 47145112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 47448891 - 47448854
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  47448891 tgtgagtatgagagagaaagttgtcacaaaagttgtca 47448854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 8904418 - 8904446
Alignment:
Q  6 gtatgagagagaaaattgtcacaaaaatt 34  Q
    |||||||||||||||||||||||||||||    
T  8904418 gtatgagagagaaaattgtcacaaaaatt 8904446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 39332050 - 39331982
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattga-tgaatgttcaaatatcatttttcatt 68  Q
    ||||||||| ||||||||| |||| |||||| |||||| | | || ||||||||||||||||| |||||    
T  39332050 tgtgagtataagagagaaagttgttacaaaagttgtcactaaatggatgttcaaatatcatttctcatt 39331982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 44184565 - 44184601
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtc 37  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  44184565 tgtgagtatgagagagaaagttgtcacaaaagttgtc 44184601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2689070 - 2689132
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||||||||||||  ||| |||||||||||||||||    
T  2689070 tgtgagtatgagagagaaagttgtcacaaaaattgtcattaaatggatgttcaaatatcattt 2689132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24842433 - 24842371
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||||  |||||||||| ||||||||  |||||||||||||||||||||    
T  24842433 tgtgagtatgagagagaaagctgtcacaaaagttgtcattaaatgaatgttcaaatatcattt 24842371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5570340 - 5570401
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||||||||||||||||||||| |   |||  ||||||||||||||||    
T  5570340 tgtgagtatgagagagaaaattgtcacaaaaattgtaaaaaatggttgttcaaatatcattt 5570401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2242028 - 2242090
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtc-attgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||||||||| |   |||| ||||||||||||||||    
T  2242028 tgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatgattgttcaaatatcattt 2242090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 5522644 - 5522710
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcatttttca 66  Q
    ||||| ||||||||| ||| |||||||||||||| |||   ||||||||||||||||||||||||||    
T  5522644 tgtgaatatgagagataaagttgtcacaaaaattatcaaaagatgaatgttcaaatatcatttttca 5522710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18141307 - 18141369
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| |||||||   ||||||||| |||||||||||    
T  18141307 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatgaatgtttaaatatcattt 18141369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20822874 - 20822936
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| |||||||   ||| |||||||||||||||||    
T  20822874 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcattt 20822936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34442069 - 34442107
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat 39  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  34442069 tgtgagtatgagagagaaaattgtcacaaaagttgtcat 34442107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 23628423 - 23628358
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcatttttcat 67  Q
    ||||||||||| |||||||||||||||||||| |||||  ||| || |||||||||||||| ||||    
T  23628423 tgagtatgagatagaaaattgtcacaaaaattatcattaaatggatattcaaatatcatttctcat 23628358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30152536 - 30152601
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattga-tgaatgttcaaatatcatttttc 65  Q
    ||||||||||||||||||| ||||  ||||| |||||| | | |||||||||||||||||||||||    
T  30152536 tgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatgaatgttcaaatatcatttttc 30152601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 13423033 - 13422998
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    ||||||||||||||||||| ||||||||||||||||    
T  13423033 tgtgagtatgagagagaaagttgtcacaaaaattgt 13422998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 25811845 - 25811912
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcatttttcatt 68  Q
    ||||||||||||||||||| ||||||||||| |||| |   |||  |||||||||||||||| |||||    
T  25811845 tgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttctcatt 25811912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3199025 - 3198963
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| |||||| ||||||| |||    |||||||||||||||||||||    
T  3199025 tgtgagtatgagagagaaagttgtcataaaaattatcaccaaatgaatgttcaaatatcattt 3198963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11547535 - 11547597
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||||||||  ||||| ||||||||  ||| |||||||||||| ||||    
T  11547535 tgtgagtatgagagagaaaattgttgcaaaagttgtcattaaatggatgttcaaatattattt 11547597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 14817995 - 14817961
Alignment:
Q  2 gtgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    |||||||||||||||||| ||||||||||||||||    
T  14817995 gtgagtatgagagagaaagttgtcacaaaaattgt 14817961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32459523 - 32459585
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||| ||||||||||||| ||||||||||| |||||||   ||| |||||||||||||||||    
T  32459523 tgtgaatatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcattt 32459585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34047451 - 34047385
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcatttttcat 67  Q
    ||||||||||||||||||| ||||||||||| |||| |   |||  |||||||||||||||| ||||    
T  34047451 tgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttctcat 34047385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8645373 - 8645336
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  8645373 tgtgagtatgagagagaaagttgtcacaaaagttgtca 8645336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 28630163 - 28630130
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||||||||||||||| ||||||||||||||    
T  28630163 tgtgagtatgagagagaaagttgtcacaaaaatt 28630130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 33635909 - 33635942
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    ||||||||||||||||||||||||||||| ||||    
T  33635909 tgagtatgagagagaaaattgtcacaaaagttgt 33635942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 11635541 - 11635609
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtc-attgatgaatgttcaaatatcatttttcatt 68  Q
    ||||| ||||||||||||| ||||||||||| ||||| |   |||| |||||||||||||||| |||||    
T  11635541 tgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttctcatt 11635609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13143388 - 13143448
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcat 60  Q
    ||||||||||||||||||| ||||  ||||||||||||    |||||||||||||||||||    
T  13143388 tgtgagtatgagagagaaagttgttgcaaaaattgtcacaaaatgaatgttcaaatatcat 13143448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 17182163 - 17182131
Alignment:
Q  2 gtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  17182163 gtgaatatgagagagaaaattgtcacaaaaatt 17182131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 36
Target Start/End: Original strand, 25142564 - 25142592
Alignment:
Q  8 atgagagagaaaattgtcacaaaaattgt 36  Q
    |||||||||||||||||||||||||||||    
T  25142564 atgagagagaaaattgtcacaaaaattgt 25142592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7627913 - 7627846
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcatttttcat 67  Q
    |||||||||||||||||||||| ||||||||||| |||||  |||||| |||||||||||||| ||||    
T  7627913 tgtgagtatgagagagaaaattatcacaaaaattatcattaaatgaatattcaaatatcatttctcat 7627846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40348858 - 40348797
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||||||||||||||||||| | |   |||| ||||||||||||||||    
T  40348858 tgtgagtatgagagagaaaattgtcacaaaaattataaaaaatgattgttcaaatatcattt 40348797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 50050696 - 50050641
Alignment:
Q  7 tatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||||||||||||||||   || | ||||||||||||||||    
T  50050696 tatgagagagaaaattgtcacaaaaattgtcaaaaataattgttcaaatatcattt 50050641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33860712 - 33860650
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||||||||||    ||| |||||||||||||||||    
T  33860712 tgtgagtatgagagagaaagttgtcacaaaaattgtcaccaaatggatgttcaaatatcattt 33860650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 38519858 - 38519792
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtc-attgatgaatgttcaaatatcatttttca 66  Q
    ||||||||||||||||||| ||||||||||||||||| |   |||  ||||||||||||||||||||    
T  38519858 tgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatggttgttcaaatatcatttttca 38519792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 56557798 - 56557760
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat 39  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  56557798 tgtgagtatgagagagaaaattgtcacaaaagttgtcat 56557760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2268514 - 2268575
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| |||| |   ||| |||||||||||||||||    
T  2268514 tgtgagtatgagagagaaagttgtcacaaaagttgttaaaaatggatgttcaaatatcattt 2268575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37297113 - 37297052
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||||||||||||||| |||| |   |||  ||||||||||||||||    
T  37297113 tgtgagtatgagagagaaaattgtcacaaaagttgtaaaaaatggttgttcaaatatcattt 37297052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 439266 - 439334
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcatttttcatt 68  Q
    ||||||||||||||||||||||||  | ||||||||||||  ||| |||||||||||| |||| |||||    
T  439266 tgtgagtatgagagagaaaattgttgcgaaaattgtcattaaatggatgttcaaatattatttctcatt 439334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 47240879 - 47240815
Alignment:
Q  4 gagtatgagagagaaaattgtcacaaaaattgtc-attgatgaatgttcaaatatcatttttcat 67  Q
    |||||||||||||||| ||||  ||||||||||| ||  ||||||||||||||||||||| ||||    
T  47240879 gagtatgagagagaaagttgttgcaaaaattgtcaataaatgaatgttcaaatatcatttatcat 47240815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 149491 - 149558
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattga-tgaatgttcaaatatcatttttcat 67  Q
    ||||||||||||||||||| |||||||||||||| |||   | ||| |||||||||||||||| ||||    
T  149491 tgtgagtatgagagagaaagttgtcacaaaaattatcaaaaagtgattgttcaaatatcatttctcat 149558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 14443259 - 14443196
Alignment:
Q  5 agtatgagagagaaaattgtcacaaaaattgtc-attgatgaatgttcaaatatcatttttcat 67  Q
    ||||||||||||||||||||||||||| ||||| |   |||| |||||||||||||||| ||||    
T  14443259 agtatgagagagaaaattgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttctcat 14443196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 44257736 - 44257771
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    ||||||||||||||||||| ||||||||||||||||    
T  44257736 tgtgagtatgagagagaaagttgtcacaaaaattgt 44257771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 45083043 - 45082984
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||||| |||||||| ||||||   |||  ||||||||||||||||    
T  45083043 tgagtatgagagagaaaattatcacaaaagttgtcaaaaatggttgttcaaatatcattt 45082984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 56474770 - 56474805
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    ||||||||| ||||||||||||||||||||||||||    
T  56474770 tgtgagtataagagagaaaattgtcacaaaaattgt 56474805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13139213 - 13139151
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| |||||| ||||||| ||||   ||| |||||||||||||||||    
T  13139213 tgtgagtatgagagagaaagttgtcataaaaattatcataaaatggatgttcaaatatcattt 13139151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21617248 - 21617186
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| |||| |||||||||||||    ||| |||||||||||||||||    
T  21617248 tgtgagtatgagagagaaagttgtaacaaaaattgtcacaaaatggatgttcaaatatcattt 21617186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30170026 - 30170064
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat 39  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  30170026 tgtgagtatgagagagaaagttgtcacaaaagttgtcat 30170064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39158170 - 39158108
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtc-attgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| |||||||||||||| || |   |||| ||||||||||||||||    
T  39158170 tgtgagtatgagagagaaagttgtcacaaaaattatcaaaaaatgattgttcaaatatcattt 39158108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40609675 - 40609613
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| || |||||  ||| |||||||||||| ||||    
T  40609675 tgtgagtatgagagagaaagttgtcacaaaagttatcattaaatggatgttcaaatatgattt 40609613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 336814 - 336851
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  336814 tgtgaatatgagagagaaagttgtcacaaaaattgtca 336851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 1580290 - 1580319
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  1580290 tgtgagtatgagagagaaaattgtcacaaa 1580319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 4915680 - 4915741
Alignment:
Q  2 gtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||| |||||| |||||||||||    ||| |||||||||||||||||    
T  4915680 gtgagtatgagagagaaagttgtcataaaaattgtcacaaaatggatgttcaaatatcattt 4915741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5932770 - 5932807
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  5932770 tgtgagtatgagagagaaagttgtcacaaaagttgtca 5932807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 32
Target Start/End: Original strand, 22027450 - 22027479
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaa 32  Q
    ||||||||||||||||||||||||||||||    
T  22027450 tgagtatgagagagaaaattgtcacaaaaa 22027479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28458383 - 28458420
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  28458383 tgtgagtatgagagagaaagttgtcacaaaagttgtca 28458420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29175291 - 29175230
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||| ||| |||||||||||||||| |   |||| |||||| |||||||||    
T  29175291 tgtgagtatgagagaaaaagttgtcacaaaaattgtaaaaaatgattgttcatatatcattt 29175230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31574946 - 31574983
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  31574946 tgtgagtatgagagagaaaattatcacaaaagttgtca 31574983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 46634164 - 46634103
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||| ||| ||||||||||| |||| |   |||| ||||||||||||||||    
T  46634164 tgtgagtatgagagataaagttgtcacaaaagttgtaaaaaatgattgttcaaatatcattt 46634103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 50890080 - 50890117
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  50890080 tgtgagtatgagagagaaagttgtcacaaaagttgtca 50890117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 51255811 - 51255774
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  51255811 tgtgagtatgagagagaaagttgtcacaaaagttgtca 51255774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 9362690 - 9362746
Alignment:
Q  7 tatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcattt 62  Q
    ||||||| ||||| ||||||||||| ||||||||  ||| |||||||||||||||||    
T  9362690 tatgagatagaaagttgtcacaaaagttgtcattaaatggatgttcaaatatcattt 9362746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 31559603 - 31559575
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaa 29  Q
    |||||||||||||||||||||||||||||    
T  31559603 tgtgagtatgagagagaaaattgtcacaa 31559575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38338928 - 38338964
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtc 37  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  38338928 tgtgagtatgagagagaaagttgtcacaaaagttgtc 38338964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 47288144 - 47288112
Alignment:
Q  4 gagtatgagagagaaaattgtcacaaaaattgt 36  Q
    |||||||||||||||| ||||||||||||||||    
T  47288144 gagtatgagagagaaagttgtcacaaaaattgt 47288112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 48649580 - 48649548
Alignment:
Q  4 gagtatgagagagaaaattgtcacaaaaattgt 36  Q
    |||||||||||||||||||||||||||| ||||    
T  48649580 gagtatgagagagaaaattgtcacaaaagttgt 48649548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5864268 - 5864206
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||| |||||||||||||||||| ||||||||| ||| | ||||||||||||||||||||||    
T  5864268 tgtgattatgagagagaaaattgttacaaaaattatcactagatgaatgttcaaatatcattt 5864206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41600374 - 41600312
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtc-attgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| ||||| ||  |||||||||||||||||||||    
T  41600374 tgtgagtatgagagagaaagttgtcacaaaagttgtcaataaatgaatgttcaaatatcattt 41600312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 45529252 - 45529314
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| |||| ||||||||||||| |  |||||||||||||||||||||    
T  45529252 tgtgagtatgagagagaaagttgttacaaaaattgtcactaaatgaatgttcaaatatcattt 45529314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 9549205 - 9549270
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcatttttc 65  Q
    ||||||||||||||||||||||||||||||| ||||||    ||| ||||||||||||||||||||    
T  9549205 tgtgagtatgagagagaaaattgtcacaaaagttgtcacaaaatggatgttcaaatatcatttttc 9549270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 44825507 - 44825443
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcatttttc 65  Q
    ||||||||||||||| ||||||||||||||| ||||||   |||| ||||||| |||||||||||    
T  44825507 tgtgagtatgagagataaaattgtcacaaaagttgtcaaaaatgattgttcaattatcatttttc 44825443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9208131 - 9208069
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcattt 62  Q
    |||||||||||||||  || ||||||||||||||||||||  ||| |||||||||||||||||    
T  9208131 tgtgagtatgagagatgaagttgtcacaaaaattgtcattaaatggatgttcaaatatcattt 9208069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31597013 - 31596951
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||| | |||||||||||||||||||   ||| |||||||||||||||||    
T  31597013 tgtgagtatgagagagagagttgtcacaaaaattgtcataaaatggatgttcaaatatcattt 31596951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6991814 - 6991851
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    |||||||||||||||||||||| |||||||||||||||    
T  6991814 tgtgagtatgagagagaaaattatcacaaaaattgtca 6991851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 12735020 - 12735056
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaattgtcat 39  Q
    ||||||||||||||||||||||||||||| |||||||    
T  12735020 tgagtatgagagagaaaattgtcacaaaagttgtcat 12735056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 18651435 - 18651400
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    ||||||||||||||||||||||||||||||| ||||    
T  18651435 tgtgagtatgagagagaaaattgtcacaaaagttgt 18651400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3946305 - 3946243
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| ||||||    ||| |||||||||||||||||    
T  3946305 tgtgagtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcattt 3946243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11017870 - 11017808
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||  ||||| ||||||||  ||| |||||||||||||||||    
T  11017870 tgtgagtatgagagagaaagttgttgcaaaagttgtcattaaatggatgttcaaatatcattt 11017808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5600993 - 5601030
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  5600993 tgtgagtatgagagaaaaaattgtcacaaaagttgtca 5601030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5639627 - 5639590
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  5639627 tgtgagtatgagagaaaaaattgtcacaaaagttgtca 5639590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 7678796 - 7678767
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  7678796 tgtgagtatgagagagaaaattgtcacaaa 7678767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10692503 - 10692442
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||| ||| |||||||||||||| | |   |||| ||||||||||||||||    
T  10692503 tgtgagtatgagagataaagttgtcacaaaaattataaaaaatgattgttcaaatatcattt 10692442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 12707213 - 12707152
Alignment:
Q  2 gtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||| ||||| ||||| |||||||   ||| |||||||||||||||||    
T  12707213 gtgagtatgagagagaaagttgtcgcaaaagttgtcataaaatggatgttcaaatatcattt 12707152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22719504 - 22719443
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    |||||| |||||||||||||||||||||||| |||| |   |||  ||||||||||||||||    
T  22719504 tgtgagcatgagagagaaaattgtcacaaaagttgtaaaaaatggttgttcaaatatcattt 22719443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27325822 - 27325761
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| |||| |   |||  ||||||||||||||||    
T  27325822 tgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcattt 27325761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 28756600 - 28756567
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  28756600 tgtgagtatgagagataaaattgtcacaaaaatt 28756567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31249531 - 31249592
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||| ||||||||||||||| |||| |   |||  ||||||||||||||||    
T  31249531 tgtgagtatgagagaaaaaattgtcacaaaagttgtaaaaaatggttgttcaaatatcattt 31249592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32501203 - 32501264
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||||||||| | |||| |||| |   |||| ||||||||||||||||    
T  32501203 tgtgagtatgagagagaaaattgttaaaaaagttgtaaaaaatgattgttcaaatatcattt 32501264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 33451569 - 33451606
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  33451569 tgtgagtatgagagagaaagttgtcacaaaagttgtca 33451606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34435743 - 34435780
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  34435743 tgtgtgtatgagagagaaaattgtcacaaaagttgtca 34435780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 36426027 - 36426088
Alignment:
Q  2 gtgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcattt 62  Q
    ||||||||||| |||||| ||||||||||| ||||| ||  ||| |||||||||||||||||    
T  36426027 gtgagtatgagtgagaaagttgtcacaaaagttgtctttaaatggatgttcaaatatcattt 36426088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 39359800 - 39359764
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  39359800 tgtgagtatgagagagaaaattgtc-caaaaattgtca 39359764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 1633896 - 1633968
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcatttttcattaaat 72  Q
    ||||||||||||||||||| ||||  ||||| |||||| |  ||| ||||||||||||||||| ||| |||||    
T  1633896 tgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctcaataaat 1633968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 12783821 - 12783769
Alignment:
Q  11 agagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcattt 62  Q
    ||||| ||| ||||||||||||||||||||  ||| |||||||||||||||||    
T  12783821 agagataaagttgtcacaaaaattgtcattaaatggatgttcaaatatcattt 12783769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 41159895 - 41159931
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtc 37  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  41159895 tgtgagtatgagagagaaagttgtcacaaaagttgtc 41159931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22888828 - 22888889
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||||||||||   |||  ||||||||||||||||    
T  22888828 tgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaatggttgttcaaatatcattt 22888889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41195648 - 41195587
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||||||||||||||| ||||||   |||| | ||||||||||||||    
T  41195648 tgtgagtatgagagagaaaattgtcacaaaagttgtcaaaaatgattattcaaatatcattt 41195587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 7648454 - 7648395
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||| ||| ||||||||||||||||||   ||| |||||||||||||||||    
T  7648454 tgagtatgagagaaaaagttgtcacaaaaattgtcacaaatggatgttcaaatatcattt 7648395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 433915 - 433853
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||  |||||||| ||| || |||||||||||||||||||||    
T  433915 tgtgagtatgagagagaaagttgttgcaaaaattatcacttaatgaatgttcaaatatcattt 433853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6999074 - 6999136
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| |||||||   ||| |||||||||||||||||    
T  6999074 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcattt 6999136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11385020 - 11385058
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat 39  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  11385020 tgtgagtatgagagagaaaattatcacaaaaattgtcat 11385058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9207654 - 9207593
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| |||| |   |||| ||||||||||||||||    
T  9207654 tgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatgattgttcaaatatcattt 9207593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 13765463 - 13765403
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||| ||||||||||| |||||||   ||| |||||||||||||||||    
T  13765463 tgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcattt 13765403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25881609 - 25881573
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtc 37  Q
    ||||||||||||||||||| |||||||||||||||||    
T  25881609 tgtgagtatgagagagaaagttgtcacaaaaattgtc 25881573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 30546381 - 30546437
Alignment:
Q  7 tatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||||||||||||| |||||  ||| || ||||||||||||||    
T  30546381 tatgagagagaaaattgtcacaaaaattatcattaaatggatattcaaatatcattt 30546437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 4384119 - 4384084
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4384119 tgtgagtatgagagagaaagttgtcacaaaaattgt 4384084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 7502436 - 7502471
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||| ||||||||||||||||||    
T  7502436 tgagtatgagagagaaagttgtcacaaaaattgtca 7502471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 8848702 - 8848765
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattttt 64  Q
    ||||||| ||||||||||| ||||||||||| ||||||   |||  ||||||||||||||||||    
T  8848702 tgtgagtgtgagagagaaagttgtcacaaaagttgtcaaaaatggttgttcaaatatcattttt 8848765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 44254661 - 44254602
Alignment:
Q  4 gagtatgagagagaaaattgtcacaaaaattgtcattg-atgaatgttcaaatatcattt 62  Q
    |||||||||||||||| |||| |||||| ||||||  | |||||||||||||||||||||    
T  44254661 gagtatgagagagaaagttgtaacaaaagttgtcacagaatgaatgttcaaatatcattt 44254602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 2563765 - 2563707
Alignment:
Q  5 agtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||| ||||||||||| |||||||   ||| |||||||||||||||||    
T  2563765 agtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcattt 2563707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 7552614 - 7552557
Alignment:
Q  7 tatgagagagaaaattgtcacaaaaattgtcatt--gatgaatgttcaaatatcattt 62  Q
    ||||||||||||| |||| |||||| ||||||||   |||||||||||||||||||||    
T  7552614 tatgagagagaaagttgttacaaaagttgtcattaaaatgaatgttcaaatatcattt 7552557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9634442 - 9634504
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||| ||| |||||||||||||| ||||   ||| |||||||||||||||||    
T  9634442 tgtgagtatgagagaaaaagttgtcacaaaaattatcataaaatggatgttcaaatatcattt 9634504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 10711789 - 10711759
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  10711789 tgtgagtatgagagagaaaattgtcacaaaa 10711759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14255367 - 14255329
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat 39  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  14255367 tgtgagtatgtgagagaaaattgtcacaaaagttgtcat 14255329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15269926 - 15269864
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||| ||||| ||||||| |||||||||||||||||||   ||| |||||||||||||||||    
T  15269926 tgtgaatatgaaagagaaagttgtcacaaaaattgtcataaaatggatgttcaaatatcattt 15269864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18723659 - 18723597
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| |||| |||||||||||||    ||| |||||||||||||||||    
T  18723659 tgtgagtatgagagagaaagttgtaacaaaaattgtcacaaaatggatgttcaaatatcattt 18723597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38821431 - 38821393
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat 39  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  38821431 tgtgagtatgagaaagaaaattgtcacaaaagttgtcat 38821393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 42607537 - 42607567
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  42607537 tgtgagtatgagagagaaaattgtcacaaaa 42607567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 2221058 - 2221021
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| || |||||||||||||||    
T  2221058 tgtgagtatgagagagaaagttatcacaaaaattgtca 2221021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 4061969 - 4062027
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcattt 62  Q
    |||||||||||||||   ||||||||||||||||||||  ||| |||||||||||||||||    
T  4061969 tgagtatgagagagag--ttgtcacaaaaattgtcattaaatggatgttcaaatatcattt 4062027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 6170694 - 6170657
Alignment:
Q  2 gtgagtatgagagagaaaattgtcacaaaaattgtcat 39  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  6170694 gtgagtatgagagagaaagttgtcacaaaagttgtcat 6170657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 6895960 - 6895923
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  6895960 tgtgagtataagagagaaagttgtcacaaaaattgtca 6895923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 8427613 - 8427580
Alignment:
Q  5 agtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||| ||||||||||||||||||    
T  8427613 agtatgagagagaaagttgtcacaaaaattgtca 8427580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14877022 - 14876985
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  14877022 tgtgagtatgagagagaaagttgtcacaaaagttgtca 14876985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18254216 - 18254277
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| |||| |   |||  ||||||||||||||||    
T  18254216 tgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcattt 18254277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 21738622 - 21738655
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    |||||||||||||||||||||| |||||||||||    
T  21738622 tgtgagtatgagagagaaaattatcacaaaaatt 21738655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 29684619 - 29684680
Alignment:
Q  2 gtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||| ||||  |||||||||||| |  || ||||||||||||||||||    
T  29684619 gtgagtatgagagagaaagttgttgcaaaaattgtcactaaataaatgttcaaatatcattt 29684680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31922299 - 31922336
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  31922299 tgtgagtttgagagagaaagttgtcacaaaaattgtca 31922336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 32869885 - 32869828
Alignment:
Q  7 tatgagagagaaaattgtcacaaaaattgtcattga-tgaatgttcaaatatcatttt 63  Q
    ||||| ||||||| |||||||||||||| ||||  | |||||||||||||||||||||    
T  32869885 tatgaaagagaaagttgtcacaaaaattatcataaaatgaatgttcaaatatcatttt 32869828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34945097 - 34945158
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| |||||| ||||||| | |   |||| ||||||||||||||||    
T  34945097 tgtgagtatgagagagaaagttgtcataaaaattataaaaaatgattgttcaaatatcattt 34945158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 37731206 - 37731243
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  37731206 tgtgtgtatgagagagaaaattgtcacaaaagttgtca 37731243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 40210074 - 40210107
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||||||||||||||| ||||||||||||||    
T  40210074 tgtgagtatgagagagaaagttgtcacaaaaatt 40210107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 12784406 - 12784438
Alignment:
Q  2 gtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    |||||||||||||||||| ||||||||||||||    
T  12784406 gtgagtatgagagagaaagttgtcacaaaaatt 12784438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 28245793 - 28245757
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtc 37  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  28245793 tgtgagtatgagagagaaagttgtcacaaaagttgtc 28245757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31389612 - 31389549
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaa--ttgtcattgatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||||||| ||||| |||  ||||  |  |||||||||||||||||||||    
T  31389612 tgtgagtatgagagagaaaattatcacacaaaagttgtactaaatgaatgttcaaatatcattt 31389549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 37003675 - 37003643
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaat 33  Q
    ||||||||||||||||||| |||||||||||||    
T  37003675 tgtgagtatgagagagaaagttgtcacaaaaat 37003643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 46172413 - 46172474
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||||||| | |||||| |||||| | ||| |||||||||||||||||    
T  46172413 tgtgagtatgagagagaaaattattacaaaagttgtcactaatggatgttcaaatatcattt 46172474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 47215735 - 47215796
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcatt 61  Q
    ||||||||||||||||||||||||||||||| ||||||||  ||  ||||||||||||||||    
T  47215735 tgtgagtatgagagagaaaattgtcacaaaagttgtcattatatagatgttcaaatatcatt 47215796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 52267268 - 52267228
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattg 41  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  52267268 tgtgagtatgagagagaaagttgtcacaaaaattgtcattg 52267228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10890052 - 10890114
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| |||||||   ||| |||||||||||||||||    
T  10890052 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcattt 10890114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13489727 - 13489665
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| |||||||   ||| |||||||||||||||||    
T  13489727 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcattt 13489665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15705068 - 15705130
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| |||||||   ||| |||||||||||||||||    
T  15705068 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcattt 15705130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 51286373 - 51286435
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| |||||||   || ||||||||||||||||||    
T  51286373 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaataaatgttcaaatatcattt 51286435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 52362547 - 52362485
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| |||||||   ||| |||||||||||||||||    
T  52362547 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcattt 52362485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 8846038 - 8846005
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  8846038 tgtgagtatgagagagaaaattgtcacaaaaatt 8846005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 15083061 - 15083118
Alignment:
Q  5 agtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||||||||||| ||||||   |||  ||||||||||||||||    
T  15083061 agtatgagagagaaaattgtcacaaaagttgtcaaaaatggttgttcaaatatcattt 15083118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 50775163 - 50775200
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  50775163 tgtgagtatgagagagaaagttgtcacaaaaattgtca 50775200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 1689456 - 1689421
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    ||||||||||||||||||| ||||||||||||||||    
T  1689456 tgtgagtatgagagagaaagttgtcacaaaaattgt 1689421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 30536056 - 30536021
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgt 36  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30536056 tgtgagtatgagagagaaagttgtcacaaaaattgt 30536021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 37685395 - 37685328
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcatttttcatt 68  Q
    ||||||||||||||||||| ||||||||||| |||| |   |||  |||||||||||||||| |||||    
T  37685395 tgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttctcatt 37685328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 37700123 - 37700190
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcatttttcatt 68  Q
    ||||||||||||||||||| ||||||||||| |||| |   |||  |||||||||||||||| |||||    
T  37700123 tgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttctcatt 37700190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 34
Target Start/End: Complemental strand, 50824804 - 50824773
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||||||||||||||||||||||||||||    
T  50824804 tgagtatgagagagaaaattgtcacaaaaatt 50824773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5771754 - 5771816
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattga-tgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| |||||||||||||| |||   | ||| ||||||||||||||||    
T  5771754 tgtgagtatgagagagaaagttgtcacaaaaattatcaaaaagtgattgttcaaatatcattt 5771816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7171242 - 7171304
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcattt 62  Q
    ||||||||||||||| ||| ||||||||||| ||||||||  ||  |||||||||||||||||    
T  7171242 tgtgagtatgagagataaagttgtcacaaaagttgtcattaaatagatgttcaaatatcattt 7171304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16987003 - 16986941
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||| |||| |||    |||||||||||||||||||||    
T  16987003 tgtgagtatgagagagaaagttgtcacaataattatcaccaaatgaatgttcaaatatcattt 16986941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 26967267 - 26967213
Alignment:
Q  9 tgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcattt 62  Q
    ||||||||||| ||||||||||| ||||||||  || ||||||||||||||||||    
T  26967267 tgagagagaaagttgtcacaaaagttgtcattaaattaatgttcaaatatcattt 26967213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32915078 - 32915116
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat 39  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  32915078 tgtgagtatgagagagaaagttgtcacaaaagttgtcat 32915116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34254357 - 34254419
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||| ||| |||||||| || |||||||   |||||||||||||||||||||    
T  34254357 tgtgagtatgagagataaagttgtcacagaagttgtcataaaatgaatgttcaaatatcattt 34254419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 46543448 - 46543510
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    |||||||||||||||||||||| ||||||| ||| ||||   ||| |||||||||||||||||    
T  46543448 tgtgagtatgagagagaaaattatcacaaagattatcataaaatggatgttcaaatatcattt 46543510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 47214273 - 47214235
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcat 39  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  47214273 tgtgagtatgagagagaaagttgtcacaaaagttgtcat 47214235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8350203 - 8350264
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| ||||||||||| |||| |   |||  ||||||||||||||||    
T  8350203 tgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcattt 8350264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9566967 - 9567004
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  9566967 tgtgagtatgagagagaaagttgtcacaaaagttgtca 9567004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12657286 - 12657225
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||||||| || || |||||||||| |   |||| ||||||||||||||||    
T  12657286 tgtgagtatgagagagaaagttatctcaaaaattgtaaaaaatgattgttcaaatatcattt 12657225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29359703 - 29359638
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcatttttca 66  Q
    ||||||||||||||||||| |||| |||||| || | |   |||| ||||||||||||||||||||    
T  29359703 tgtgagtatgagagagaaagttgttacaaaagttataaaaaatgattgttcaaatatcatttttca 29359638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 35369764 - 35369703
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||| ||||| ||||||||||| |||| |   |||| ||||||||||||||||    
T  35369764 tgtgagtatgagatagaaagttgtcacaaaagttgtaaaaaatgattgttcaaatatcattt 35369703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 40328747 - 40328780
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    |||||||||||||||||||||| |||||||||||    
T  40328747 tgtgagtatgagagagaaaattatcacaaaaatt 40328780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 45333630 - 45333573
Alignment:
Q  5 agtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcattt 62  Q
    ||||||||||||||| ||||||||||| |||| |   |||| ||||||||||||||||    
T  45333630 agtatgagagagaaagttgtcacaaaagttgtaaaaaatgattgttcaaatatcattt 45333573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 46281501 - 46281468
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||||||||||||||| ||||||||||||||    
T  46281501 tgtgagtatgagagagaaagttgtcacaaaaatt 46281468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 48470703 - 48470674
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  48470703 tgtgagtatgagagagaaaattgtcacaaa 48470674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 48858888 - 48858851
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  48858888 tgtgagtatgagagagaaagttgtcacaaaagttgtca 48858851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 48983674 - 48983711
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  48983674 tgtgagtatgagagagaaagttgtcacaaaagttgtca 48983711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 52437559 - 52437526
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaatt 34  Q
    ||||||||||||||||||| ||||||||||||||    
T  52437559 tgtgagtatgagagagaaagttgtcacaaaaatt 52437526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 52714908 - 52714969
Alignment:
Q  2 gtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    |||||||||||| ||||||||||||||||| |||| ||   ||| |||||||||||||||||    
T  52714908 gtgagtatgagaaagaaaattgtcacaaaagttgttataaaatggatgttcaaatatcattt 52714969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 3603176 - 3603108
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca-ttgatgaatgttcaaatatcatttttcatt 68  Q
    ||||||||||||||||||| ||||  ||||| |||||| |  ||| ||||||||||||||||| |||||    
T  3603176 tgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctcatt 3603108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29586058 - 29585994
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcatt-gatgaatgttcaaatatcattttt 64  Q
    ||||||||||||||||||||||||  ||||| |||| |||  ||  |||||||||||||||||||    
T  29586058 tgtgagtatgagagagaaaattgttgcaaaagttgttattaaatagatgttcaaatatcattttt 29585994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 51436778 - 51436814
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtc 37  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  51436778 tgtgagtatgagagataaagttgtcacaaaaattgtc 51436814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34800 - 34867
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtcattgatgaa-tgttcaaatatcatttttcat 67  Q
    ||||||||||||||||||| |||||| |||||||||||   || || ||| |||||||||||||||||    
T  34800 tgtgagtatgagagagaaagttgtcataaaaattgtcacaaattaattgtacaaatatcatttttcat 34867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 8730 - 8668
Alignment:
Q  3 tgagtatgagagagaaaattgtcacaaaaattgtcattgatgaatgttcaaatatcatttttc 65  Q
    ||||||||| ||||||| ||||||||||| |||| |   |||| |||||||||||||||||||    
T  8730 tgagtatgaaagagaaagttgtcacaaaagttgtaaaaaatgattgttcaaatatcatttttc 8668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 38489 - 38428
Alignment:
Q  2 gtgagtatgagagagaaaattgtcacaaaaattgtcat-tgatgaatgttcaaatatcattt 62  Q
    |||||||||||| ||||| ||||||||||| |||||||   |||||||||||||||| ||||    
T  38489 gtgagtatgagaaagaaagttgtcacaaaagttgtcataaaatgaatgttcaaatattattt 38428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11001 - 10964
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  11001 tgtgagtatgagagagaaagttgtcacaaaagttgtca 10964  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41820 - 41783
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  41820 tgtgagaatgagagagaaagttgtcacaaaaattgtca 41783  T

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Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 101912 - 101949
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtca 38  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  101912 tgtgagtatgagagagaaagttgtcacaaaagttgtca 101949  T

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Target: scaffold0532 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11029 - 10993
Alignment:
Q  1 tgtgagtatgagagagaaaattgtcacaaaaattgtc 37  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  11029 tgtgagtatgagagagaaagttgtcacaaaagttgtc 10993  T

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Target: scaffold0276 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 1706 - 1674
Alignment:
Q  4 gagtatgagagagaaaattgtcacaaaaattgt 36  Q
    |||||||||||||||||||||||||||| ||||    
T  1706 gagtatgagagagaaaattgtcacaaaagttgt 1674  T

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