View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14484_high_72 (Length: 233)
Name: NF14484_high_72
Description: NF14484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14484_high_72 |
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Alignment Details
Target: chr5 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 3977082 - 3976897
Alignment:
| Q |
16 |
atggaacggatagattatgatctgaaaaacagaaagagatgcgaaaccgtgagaaaacagaagtttgaagtgtacataccagctggatgcaatttggagg |
115 |
Q |
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| T |
3977082 |
atggaacggatagattatgatctgaaaaacagaaagagaagcgaaaccgtgagagaacagaagtttgaagtgtacataccagctggatgcgatttgcagg |
3976983 |
T |
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| Q |
116 |
aaggcggagacagaggcacggggtttcaatttgatggaagattaaaccctacttttccaattaatactgccgtctattctataacg |
201 |
Q |
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| T |
3976982 |
aaggcggagacagaggcacggggtttcaatttgatggaagattaaaccctacttttccaattaataccgccgtctattctataacg |
3976897 |
T |
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