View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14484_low_72 (Length: 248)

Name: NF14484_low_72
Description: NF14484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14484_low_72
NF14484_low_72
[»] chr8 (48 HSPs)
chr8 (18-248)||(7289694-7289921)
chr8 (18-158)||(1261682-1261820)
chr8 (96-242)||(25328122-25328268)
chr8 (18-158)||(33037533-33037671)
chr8 (18-158)||(18852892-18853030)
chr8 (18-158)||(18870286-18870424)
chr8 (18-158)||(10688865-10689003)
chr8 (31-158)||(30655880-30656006)
chr8 (18-158)||(4759799-4759938)
chr8 (50-158)||(26288121-26288229)
chr8 (50-158)||(26301378-26301486)
chr8 (50-158)||(26313372-26313480)
chr8 (18-158)||(36979611-36979750)
chr8 (114-232)||(39784685-39784802)
chr8 (18-158)||(6311532-6311669)
chr8 (59-158)||(7412569-7412666)
chr8 (59-155)||(23799347-23799441)
chr8 (59-158)||(4456257-4456354)
chr8 (59-158)||(4696379-4696476)
chr8 (59-158)||(5702251-5702348)
chr8 (62-158)||(19175528-19175622)
chr8 (114-232)||(35745498-35745617)
chr8 (158-225)||(30655760-30655827)
chr8 (158-225)||(36979491-36979558)
chr8 (96-170)||(25327996-25328070)
chr8 (158-243)||(6311393-6311477)
chr8 (158-225)||(18870477-18870544)
chr8 (57-158)||(19752163-19752262)
chr8 (158-225)||(18853083-18853150)
chr8 (98-158)||(31071035-31071095)
chr8 (159-225)||(33037724-33037790)
chr8 (158-225)||(4759991-4760058)
chr8 (59-158)||(3051349-3051447)
chr8 (114-232)||(10684123-10684242)
chr8 (59-158)||(28307791-28307889)
chr8 (158-225)||(10689058-10689126)
chr8 (158-209)||(1261871-1261922)
chr8 (158-225)||(31071146-31071213)
chr8 (54-158)||(26402991-26403097)
chr8 (59-156)||(5990333-5990427)
chr8 (55-158)||(9765617-9765720)
chr8 (57-158)||(9054188-9054288)
chr8 (158-225)||(26288004-26288070)
chr8 (158-225)||(26301261-26301327)
chr8 (158-225)||(26313255-26313321)
chr8 (59-158)||(4731532-4731629)
chr8 (59-135)||(41266841-41266918)
chr8 (59-158)||(43036297-43036394)
[»] chr5 (43 HSPs)
chr5 (42-248)||(1456952-1457157)
chr5 (53-248)||(27445060-27445254)
chr5 (53-248)||(27449904-27450098)
chr5 (53-248)||(43592369-43592563)
chr5 (53-248)||(43598814-43599008)
chr5 (53-248)||(43604306-43604500)
chr5 (53-248)||(43609798-43609992)
chr5 (68-232)||(15044791-15044956)
chr5 (18-158)||(35387893-35388032)
chr5 (18-158)||(38219629-38219768)
chr5 (18-158)||(24136080-24136218)
chr5 (114-232)||(28807436-28807553)
chr5 (47-158)||(31180447-31180557)
chr5 (123-232)||(37556494-37556601)
chr5 (123-232)||(37561316-37561423)
chr5 (159-243)||(30631502-30631586)
chr5 (57-158)||(28832486-28832585)
chr5 (59-158)||(9353103-9353200)
chr5 (59-156)||(14520461-14520556)
chr5 (57-158)||(24553296-24553395)
chr5 (68-158)||(30631640-30631730)
chr5 (62-158)||(11916746-11916840)
chr5 (114-232)||(33791423-33791542)
chr5 (59-158)||(11181603-11181700)
chr5 (59-158)||(15464763-15464860)
chr5 (59-158)||(36932119-36932216)
chr5 (57-158)||(31300364-31300463)
chr5 (114-232)||(2785482-2785601)
chr5 (158-243)||(31180310-31180394)
chr5 (59-158)||(17003730-17003827)
chr5 (62-158)||(12083951-12084045)
chr5 (57-158)||(42127139-42127238)
chr5 (73-156)||(7160689-7160770)
chr5 (158-225)||(24135961-24136028)
chr5 (55-158)||(10281981-10282085)
chr5 (114-232)||(31396850-31396971)
chr5 (79-157)||(19588975-19589051)
chr5 (158-225)||(38192286-38192353)
chr5 (158-225)||(38219511-38219578)
chr5 (114-232)||(31401707-31401828)
chr5 (158-209)||(35387791-35387842)
chr5 (59-158)||(13488077-13488174)
chr5 (204-232)||(33768286-33768314)
[»] chr6 (31 HSPs)
chr6 (53-248)||(11857064-11857258)
chr6 (53-248)||(22010498-22010692)
chr6 (53-242)||(14737378-14737566)
chr6 (53-242)||(14742238-14742426)
chr6 (96-242)||(28184600-28184749)
chr6 (18-158)||(5674495-5674633)
chr6 (114-232)||(28155432-28155549)
chr6 (114-232)||(6438606-6438723)
chr6 (18-156)||(22709241-22709378)
chr6 (114-232)||(16838851-16838970)
chr6 (57-158)||(31936804-31936903)
chr6 (114-232)||(6005524-6005643)
chr6 (114-232)||(33330304-33330423)
chr6 (114-232)||(33335801-33335920)
chr6 (59-158)||(5757249-5757346)
chr6 (57-158)||(5572012-5572111)
chr6 (59-159)||(31086245-31086343)
chr6 (63-158)||(5017271-5017364)
chr6 (57-158)||(31979741-31979840)
chr6 (59-134)||(18234334-18234409)
chr6 (59-124)||(10076962-10077027)
chr6 (59-158)||(24435743-24435839)
chr6 (158-209)||(5674685-5674736)
chr6 (62-137)||(21272763-21272838)
chr6 (61-158)||(22963928-22964023)
chr6 (61-158)||(23824370-23824465)
chr6 (55-158)||(21801108-21801212)
chr6 (158-225)||(22709121-22709188)
chr6 (59-109)||(23896628-23896678)
chr6 (55-158)||(14521903-14522007)
chr6 (59-114)||(31076706-31076762)
[»] chr7 (43 HSPs)
chr7 (53-248)||(12397001-12397195)
chr7 (96-248)||(12406421-12406573)
chr7 (59-242)||(31109389-31109573)
chr7 (53-242)||(24024128-24024316)
chr7 (33-158)||(21640039-21640164)
chr7 (18-158)||(18413869-18414008)
chr7 (33-158)||(18408993-18409118)
chr7 (34-158)||(1533183-1533307)
chr7 (42-158)||(21646237-21646353)
chr7 (41-158)||(2058202-2058318)
chr7 (32-158)||(20357285-20357410)
chr7 (41-156)||(4873310-4873424)
chr7 (132-232)||(19992419-19992518)
chr7 (132-230)||(21812118-21812215)
chr7 (53-158)||(46516070-46516173)
chr7 (59-158)||(2479565-2479662)
chr7 (59-158)||(23402784-23402881)
chr7 (59-158)||(20284318-20284415)
chr7 (59-156)||(44847896-44847991)
chr7 (62-158)||(21989137-21989231)
chr7 (57-158)||(2580619-2580717)
chr7 (57-158)||(2647466-2647565)
chr7 (62-158)||(4796443-4796536)
chr7 (59-137)||(3047502-3047581)
chr7 (59-159)||(49091917-49092015)
chr7 (59-158)||(47263895-47263992)
chr7 (158-209)||(1533359-1533410)
chr7 (57-158)||(9189775-9189875)
chr7 (57-158)||(9184943-9185042)
chr7 (59-158)||(33332221-33332318)
chr7 (59-133)||(79640-79714)
chr7 (158-232)||(20357463-20357537)
chr7 (55-157)||(5817036-5817137)
chr7 (158-225)||(21639921-21639988)
chr7 (158-225)||(21646119-21646186)
chr7 (52-158)||(29160034-29160141)
chr7 (114-232)||(24266061-24266180)
chr7 (158-225)||(2058079-2058147)
chr7 (158-225)||(18408876-18408943)
chr7 (158-225)||(18413752-18413819)
chr7 (123-232)||(24261191-24261301)
chr7 (62-99)||(21983541-21983578)
chr7 (79-158)||(38671419-38671495)
[»] chr4 (45 HSPs)
chr4 (53-248)||(51520547-51520741)
chr4 (53-246)||(9224208-9224400)
chr4 (53-246)||(9228995-9229187)
chr4 (114-248)||(45347678-45347812)
chr4 (18-158)||(24742174-24742312)
chr4 (18-158)||(28468265-28468404)
chr4 (114-232)||(45357158-45357276)
chr4 (103-232)||(3814129-3814257)
chr4 (40-158)||(29760874-29760993)
chr4 (114-232)||(5732770-5732887)
chr4 (114-232)||(18855832-18855949)
chr4 (59-158)||(3777778-3777875)
chr4 (59-158)||(16623064-16623161)
chr4 (59-156)||(5268971-5269066)
chr4 (59-158)||(5396442-5396539)
chr4 (59-158)||(10047610-10047707)
chr4 (59-158)||(31985404-31985501)
chr4 (57-155)||(25861802-25861898)
chr4 (59-158)||(6743186-6743283)
chr4 (59-158)||(16628643-16628740)
chr4 (68-164)||(18712581-18712677)
chr4 (59-158)||(36315001-36315098)
chr4 (59-158)||(36329210-36329307)
chr4 (158-225)||(24742054-24742121)
chr4 (62-137)||(8689270-8689345)
chr4 (59-133)||(54867431-54867505)
chr4 (63-137)||(5143508-5143582)
chr4 (57-158)||(42599344-42599442)
chr4 (59-158)||(5112466-5112564)
chr4 (55-158)||(6542378-6542480)
chr4 (55-158)||(51336933-51337035)
chr4 (59-158)||(38152208-38152306)
chr4 (62-137)||(5147926-5148001)
chr4 (54-158)||(3793843-3793948)
chr4 (160-209)||(29760772-29760821)
chr4 (55-158)||(24334040-24334144)
chr4 (59-158)||(39774075-39774173)
chr4 (158-209)||(28468455-28468506)
chr4 (59-132)||(1983070-1983144)
chr4 (79-137)||(6677362-6677420)
chr4 (206-248)||(56146664-56146706)
chr4 (52-158)||(4587823-4587929)
chr4 (59-158)||(48142916-48143013)
chr4 (77-158)||(48893839-48893920)
chr4 (59-158)||(52082854-52082951)
[»] chr3 (67 HSPs)
chr3 (53-248)||(22172996-22173190)
chr3 (18-158)||(9091026-9091164)
chr3 (18-158)||(1306179-1306318)
chr3 (18-158)||(2671311-2671449)
chr3 (18-158)||(8738788-8738926)
chr3 (41-158)||(40372542-40372659)
chr3 (32-158)||(8477598-8477724)
chr3 (42-158)||(7167478-7167595)
chr3 (18-158)||(28503585-28503727)
chr3 (114-232)||(18656540-18656657)
chr3 (31-158)||(28501429-28501560)
chr3 (59-158)||(27986216-27986313)
chr3 (59-158)||(26928359-26928456)
chr3 (59-158)||(32143552-32143649)
chr3 (59-158)||(40592542-40592639)
chr3 (59-155)||(21711454-21711548)
chr3 (158-243)||(28501613-28501698)
chr3 (158-243)||(28503780-28503865)
chr3 (59-158)||(1736064-1736161)
chr3 (59-158)||(8370249-8370346)
chr3 (59-158)||(24694926-24695023)
chr3 (59-158)||(27974712-27974809)
chr3 (59-158)||(33386435-33386532)
chr3 (57-158)||(6794473-6794572)
chr3 (57-158)||(26299217-26299316)
chr3 (114-232)||(2676946-2677065)
chr3 (114-232)||(24968214-24968333)
chr3 (63-158)||(16264578-16264671)
chr3 (63-158)||(36029322-36029415)
chr3 (59-158)||(47923664-47923761)
chr3 (57-158)||(3323449-3323548)
chr3 (59-137)||(37725923-37726001)
chr3 (114-232)||(2672790-2672909)
chr3 (56-155)||(4386733-4386831)
chr3 (59-158)||(27453189-27453284)
chr3 (59-158)||(39032315-39032411)
chr3 (158-225)||(7167358-7167425)
chr3 (57-159)||(37466523-37466623)
chr3 (57-158)||(3328115-3328214)
chr3 (59-155)||(23410529-23410624)
chr3 (61-158)||(48438445-48438539)
chr3 (57-137)||(1417249-1417329)
chr3 (59-158)||(27026935-27027032)
chr3 (59-158)||(27038280-27038377)
chr3 (57-158)||(8126859-8126958)
chr3 (62-147)||(25929159-25929242)
chr3 (59-158)||(23392106-23392204)
chr3 (63-155)||(40844887-40844977)
chr3 (62-158)||(35925707-35925803)
chr3 (52-158)||(3715752-3715859)
chr3 (158-225)||(26928507-26928574)
chr3 (114-232)||(8512324-8512443)
chr3 (114-232)||(8517204-8517323)
chr3 (158-209)||(8477493-8477545)
chr3 (55-158)||(25796009-25796113)
chr3 (158-225)||(2671502-2671569)
chr3 (158-225)||(32143434-32143501)
chr3 (158-225)||(40372712-40372779)
chr3 (60-158)||(47649799-47649898)
chr3 (161-225)||(8738982-8739046)
chr3 (161-225)||(9091220-9091284)
chr3 (55-137)||(21353811-21353898)
chr3 (59-107)||(30709557-30709605)
chr3 (158-225)||(1306061-1306128)
chr3 (158-225)||(27453071-27453138)
chr3 (79-158)||(22835199-22835275)
chr3 (79-158)||(39153558-39153634)
[»] scaffold0135 (1 HSPs)
scaffold0135 (53-246)||(34863-35055)
[»] chr1 (39 HSPs)
chr1 (68-242)||(41398331-41398506)
chr1 (99-242)||(41390676-41390819)
chr1 (41-158)||(24202518-24202635)
chr1 (18-158)||(19366035-19366174)
chr1 (18-158)||(19358571-19358709)
chr1 (18-158)||(19361160-19361298)
chr1 (18-157)||(24787090-24787226)
chr1 (114-232)||(25439758-25439875)
chr1 (114-232)||(25444951-25445068)
chr1 (114-232)||(1054874-1054991)
chr1 (114-232)||(39445605-39445722)
chr1 (114-232)||(44023736-44023853)
chr1 (57-158)||(47098594-47098693)
chr1 (57-158)||(47102608-47102707)
chr1 (59-158)||(13604393-13604490)
chr1 (61-158)||(29652042-29652137)
chr1 (59-156)||(37069998-37070093)
chr1 (62-158)||(21536344-21536438)
chr1 (57-158)||(27104171-27104269)
chr1 (57-158)||(32889667-32889766)
chr1 (62-158)||(3281936-3282030)
chr1 (59-158)||(13598629-13598726)
chr1 (57-158)||(9476491-9476590)
chr1 (158-232)||(24787280-24787354)
chr1 (59-155)||(26644669-26644763)
chr1 (55-158)||(47703699-47703803)
chr1 (61-158)||(22819660-22819756)
chr1 (55-158)||(40816580-40816684)
chr1 (158-225)||(24202686-24202753)
chr1 (60-156)||(19073159-19073256)
chr1 (60-156)||(19121049-19121146)
chr1 (114-232)||(43988321-43988442)
chr1 (158-225)||(19358760-19358827)
chr1 (158-225)||(19361349-19361416)
chr1 (158-225)||(19366225-19366292)
chr1 (158-225)||(19379989-19380056)
chr1 (55-137)||(17345327-17345410)
chr1 (59-154)||(9022677-9022770)
chr1 (79-158)||(197105-197181)
[»] scaffold0188 (4 HSPs)
scaffold0188 (18-158)||(17679-17818)
scaffold0188 (33-158)||(23786-23911)
scaffold0188 (158-225)||(17869-17936)
scaffold0188 (158-225)||(23962-24029)
[»] chr2 (46 HSPs)
chr2 (68-242)||(39811803-39811978)
chr2 (18-158)||(25409860-25409999)
chr2 (18-158)||(11098652-11098790)
chr2 (18-158)||(9296127-9296265)
chr2 (18-158)||(14291722-14291860)
chr2 (114-232)||(32246893-32247011)
chr2 (54-158)||(3491981-3492085)
chr2 (61-158)||(40739063-40739158)
chr2 (57-158)||(14698778-14698877)
chr2 (57-158)||(33118364-33118463)
chr2 (59-158)||(33528395-33528492)
chr2 (62-158)||(21630174-21630268)
chr2 (62-158)||(34389080-34389174)
chr2 (62-158)||(36757536-36757630)
chr2 (59-158)||(28258948-28259045)
chr2 (158-225)||(11098843-11098910)
chr2 (114-232)||(19344528-19344648)
chr2 (114-232)||(19349386-19349506)
chr2 (57-158)||(10445236-10445335)
chr2 (68-158)||(17865434-17865522)
chr2 (59-136)||(20522471-20522548)
chr2 (59-156)||(8389920-8390015)
chr2 (59-137)||(13569577-13569655)
chr2 (62-158)||(23078245-23078339)
chr2 (59-158)||(10707023-10707120)
chr2 (192-248)||(44312563-44312619)
chr2 (55-158)||(31056272-31056376)
chr2 (55-158)||(34682097-34682201)
chr2 (158-225)||(3491863-3491930)
chr2 (158-225)||(14291602-14291669)
chr2 (55-158)||(8040293-8040397)
chr2 (77-156)||(2837816-2837895)
chr2 (158-217)||(9296317-9296376)
chr2 (55-137)||(42269617-42269702)
chr2 (57-158)||(35397738-35397839)
chr2 (158-225)||(25398608-25398675)
chr2 (158-225)||(25403746-25403813)
chr2 (158-225)||(25407735-25407802)
chr2 (59-137)||(40015173-40015251)
chr2 (158-225)||(40738945-40739012)
chr2 (77-158)||(2869481-2869560)
chr2 (89-158)||(39483162-39483229)
chr2 (77-137)||(1344333-1344394)
chr2 (59-158)||(39284759-39284856)
chr2 (79-158)||(11151788-11151864)
chr2 (79-158)||(42362247-42362323)
[»] scaffold0355 (2 HSPs)
scaffold0355 (68-242)||(3663-3837)
scaffold0355 (123-242)||(9514-9632)
[»] scaffold0464 (1 HSPs)
scaffold0464 (114-232)||(468-585)
[»] scaffold0140 (1 HSPs)
scaffold0140 (59-158)||(8188-8285)
[»] scaffold0087 (2 HSPs)
scaffold0087 (59-158)||(36603-36700)
scaffold0087 (59-158)||(43732-43829)
[»] scaffold0006 (3 HSPs)
scaffold0006 (59-158)||(133050-133147)
scaffold0006 (59-158)||(5914-6011)
scaffold0006 (59-155)||(2726-2819)
[»] scaffold0036 (1 HSPs)
scaffold0036 (62-158)||(85912-86006)
[»] scaffold0098 (1 HSPs)
scaffold0098 (59-158)||(45427-45525)
[»] scaffold0176 (1 HSPs)
scaffold0176 (59-158)||(17480-17577)
[»] scaffold0148 (1 HSPs)
scaffold0148 (55-158)||(10960-11064)
[»] scaffold0259 (1 HSPs)
scaffold0259 (114-232)||(2110-2229)
[»] scaffold0197 (2 HSPs)
scaffold0197 (114-232)||(14168-14287)
scaffold0197 (114-232)||(19024-19143)
[»] scaffold0078 (1 HSPs)
scaffold0078 (59-158)||(23761-23859)
[»] scaffold0028 (1 HSPs)
scaffold0028 (114-232)||(148815-148934)
[»] scaffold0009 (1 HSPs)
scaffold0009 (114-201)||(176836-176925)
[»] scaffold0477 (1 HSPs)
scaffold0477 (61-126)||(5728-5794)


Alignment Details
Target: chr8 (Bit Score: 156; Significance: 5e-83; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 7289694 - 7289921
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    |||||||||||  ||||||||| ||||| |||||||||||||||||||||| |||||||  |||||||||||||    ||||||||||||||||| ||||    
T  7289694 tgttcttgtgc--ttttttgaaagagagcttggaagagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgaga 7289790  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttc 217  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  7289791 gtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtggggaaacaccaaagggtagaatatagggtttgttc 7289890  T
Q  218 atgtgtaaagcttgagggttagagttcttgt 248  Q
    ||||||||||||||| || ||||||||||||    
T  7289891 atgtgtaaagcttgaaggctagagttcttgt 7289921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 1261682 - 1261820
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1261682 tgttcttgtgc--ttttttgaaggagagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 1261779  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1261780 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 1261820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 96 - 242
Target Start/End: Original strand, 25328122 - 25328268
Alignment:
Q  96 gggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaa 195  Q
    |||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  25328122 gggttgtgtgtctttgatgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaa 25328221  T
Q  196 gggtagaatctagggtttgttcatgtgtaaagcttgagggttagagt 242  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||    
T  25328222 gggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagt 25328268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 33037533 - 33037671
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| |||||||    
T  33037533 tgttcttgtgc--ttttttgaaggagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtcttcgtagaga 33037630  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  33037631 gtgtctcttgggttgggaaaaacattgtaatcaccttgggt 33037671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 18852892 - 18853030
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||| ||||    
T  18852892 tgttcttgtgc--ttttttgaaggagagcttggaagagcttagagagagaaacttggataacaaaggagggaaccaaagggttgagtgtctttgttgaga 18852989  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    | |||||||||||||||||||| ||||||||||||||||||    
T  18852990 gtgtctcttgggttgggaaaaatattgtaatcaccttgggt 18853030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 18870286 - 18870424
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||   |||||||||||||||||| ||||    
T  18870286 tgttcttgtgc--ttttttgaaggagagcttggaagagcttagagagagaaacatggataacaaaggagggaaccaaagggttgagtgtctttgttgaga 18870383  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  18870384 gtgtctcttgggttgggaaaaacattgtaatcaccttgggt 18870424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 10688865 - 10689003
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    |||||||||||||||||  ||| ||||| ||||||||||| ||| |||||||||||||| ||||||||||||||   |||||||||||||||||||||||    
T  10688865 tgttcttgtgcagtttt--gaaagagagcttggaagagctaagaaagagaaacttggataacaaaggagggaaccaaagggttgagtgtctttgtagaga 10688962  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  10688963 gtgtctcttgggttgggaaaaacattgtaatcaccttgggt 10689003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 30656006 - 30655880
Alignment:
Q  31 ttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggt 130  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||||| ||||||||||||||   |||||||||||||||||| ||||| |||||||||||    
T  30656006 ttttttgaaggagagcttggaagagcttaaagagagaa-cttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggt 30655908  T
Q  131 tgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||    
T  30655907 tgggaaaaacattgtaatcaccttgggt 30655880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 4759799 - 4759938
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    |||||||||||  || |||||||||||| |||||||||||||||||||||| |||||||| ||||||||| |||   |||||||||||||||||||||||    
T  4759799 tgttcttgtgc--ttgtttgaaggagagcttggaagagcttagagagagaatcttggattgcaaaggaggtaaccaaagggttgagtgtctttgtagaga 4759896  T
Q  118 gggtctcttgggttggg-aaaaacattgtaatcaccttgggt 158  Q
    | ||||||||||||||| ||||||||||||||||||||||||    
T  4759897 gagtctcttgggttgggaaaaaacattgtaatcaccttgggt 4759938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 26288229 - 26288121
Alignment:
Q  50 gaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatc 149  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||  ||||||| ||||||||||||||||||| |    
T  26288229 gaagagcttagagagagaaacttggattacaaaggggggaactctagggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaac 26288130  T
Q  150 accttgggt 158  Q
    |||||||||    
T  26288129 accttgggt 26288121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 26301486 - 26301378
Alignment:
Q  50 gaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatc 149  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||  ||||||| ||||||||||||||||||| |    
T  26301486 gaagagcttagagagagaaacttggattacaaaggggggaactctagggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaac 26301387  T
Q  150 accttgggt 158  Q
    |||||||||    
T  26301386 accttgggt 26301378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 26313480 - 26313372
Alignment:
Q  50 gaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatc 149  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||  ||||||| ||||||||||||||||||| |    
T  26313480 gaagagcttagagagagaaacttggattacaaaggggggaactctagggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaac 26313381  T
Q  150 accttgggt 158  Q
    |||||||||    
T  26313380 accttgggt 26313372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 36979750 - 36979611
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    ||||||||||   ||||||| || |||| ||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||    
T  36979750 tgttcttgtgttcttttttggagaagagcttggaagagcttagagagagaaacttggattacaaagaagggaaccaaagggttgagtgtctttgtagaga 36979651  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    | ||||||| ||||||| |||||||||||||||||||||||    
T  36979650 gtgtctcttaggttggg-aaaacattgtaatcaccttgggt 36979611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 39784685 - 39784802
Alignment:
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggttt 213  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||  ||||||||||    
T  39784685 gagagagtctcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtag-ttctagggttt 39784783  T
Q  214 gttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||    
T  39784784 gttcatgtgtaaagcttga 39784802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 6311669 - 6311532
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    |||||||||||  ||||||||  ||||| ||||||||||||||||| |||| |||||||  |||||||||||||   |||||||||||||||||| ||||    
T  6311669 tgttcttgtgc--ttttttgagagagagcttggaagagcttagagatagaa-cttggatagcaaaggagggaaccaaagggttgagtgtctttgttgaga 6311573  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  6311572 gtgtctcttgggttgggaaaaacattgtaatcaccttgggt 6311532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 7412666 - 7412569
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||    
T  7412666 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagagaggatctcttgggttggg--aaacattgtaaacaccttgggt 7412569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 155
Target Start/End: Original strand, 23799347 - 23799441
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttg 155  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||   |||||||||| |||||||    
T  23799347 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagagaggatctcttgggttggg--gaacattgtaaacaccttg 23799441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 4456354 - 4456257
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  4456354 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctctgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 4456257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 4696379 - 4696476
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  4696379 agagagagaaacttggattacaaaggagataactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 4696476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 5702251 - 5702348
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||| ||||||| ||||||||||    
T  5702251 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaatattgtaaacaccttgggt 5702348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 19175528 - 19175622
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| |||||||| |||||  ||||||||||| ||||||||||    
T  19175528 gagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttggattggg--aaacattgtaaacaccttgggt 19175622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 35745617 - 35745498
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||  ||||||||| |||||| ||||||||| ||||||||||||  ||||||||    
T  35745617 gagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtag-gtctagggt 35745519  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||||    
T  35745518 ttgttcatgtgtaaagcttga 35745498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 30655827 - 30655760
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  30655827 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa 30655760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 36979558 - 36979491
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  36979558 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa 36979491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 25327996 - 25328070
Alignment:
Q  96 gggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcat 170  Q
    |||||| |||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25327996 gggttgtgtgtctttgatgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcat 25328070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 6311477 - 6311393
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt 243  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||| || |||||||    
T  6311477 ttttagggttcatcttgtgagagtggggaaacaccaaagggtagaatctagggtttg-tcttgtgtaaagcttgaaggctagagtt 6311393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 18870477 - 18870544
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  18870477 ttttagggttcatattgtgagagtggggaaataccaaagggtagaatctagggtttgttcttgtgtaa 18870544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 19752163 - 19752262
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||  ||||||||| |||| ||||||||||||||||||||| |||| |||||||||||| |  ||| ||||||| ||||||||    
T  19752163 ttagagagagaaacttggatcgcaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgtg--aaatattgtaaacaccttgg 19752260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 18853083 - 18853150
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||| |||||||    
T  18853083 ttttagggttcatattgtgagagtggggaaataccaaagggtaaaatctagggtttgttcttgtgtaa 18853150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 31071035 - 31071095
Alignment:
Q  98 gttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||    
T  31071035 gttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggt 31071095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 33037724 - 33037790
Alignment:
Q  159 tttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    |||||||||||||||||||||||||| ||||||  | |||||||||||||||||||||| |||||||    
T  33037724 tttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggtttgttcttgtgtaa 33037790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 4759991 - 4760058
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| ||||||  | ||||||||||||||| |||||| |||||||    
T  4759991 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa 4760058  T

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Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 3051447 - 3051349
Alignment:
Q  59 agagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    |||||||||||||||| | || ||||||| ||||| ||||||||||||||||||||| | || ||||||| ||||||  ||||||||||| || ||||||    
T  3051447 agagagagaaacttgggactataaaggagagaactttagggttgagtgtctttgtagtggggttctcttgagttggg--aaacattgtaaacatcttggg 3051350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 10684123 - 10684242
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||  ||||||||| ||||||  |||||||  ||||||||||||  ||||||||    
T  10684123 gagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtag-gtctagggt 10684221  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    ||  || ||||||||||||||    
T  10684222 tttgtcttgtgtaaagcttga 10684242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 28307889 - 28307791
Alignment:
Q  59 agagagagaaactt-ggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    |||||||||||||| ||||||||||||||| |||| ||| |||||||||||||||||   || |||||| |||||||  ||||||||| | |||||||||    
T  28307889 agagagagaaacttaggattacaaaggaggtaactttagagttgagtgtctttgtagcacggttctcttaggttggg--aaacattgttaacaccttggg 28307792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 10689058 - 10689126
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacacca-aagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| ||||| || | ||||||||||||||| |||||| |||||||    
T  10689058 ttttagggttcatattgtgagagtggggaaacaacatatgggtagaatctagggcttgttcttgtgtaa 10689126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 1261871 - 1261922
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagg 209  Q
    ||||||||||||||||||||||||||| |||||| || ||||||||||||||    
T  1261871 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctagg 1261922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 31071146 - 31071213
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||| || |||||||| |||||  |||||| |||||||    
T  31071146 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa 31071213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 26402991 - 26403097
Alignment:
Q  54 agcttagagagagaaactt-ggattacaaaggagggaactct-agggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatc 149  Q
    ||||| ||||||||||| | ||| ||||||||||| |||| | |||||||||||||||||||| |||| ||||||  ||||||||  ||||||||||| |    
T  26402991 agctttgagagagaaacctaggaatacaaaggaggtaacttttagggttgagtgtctttgtagtgaggttctcttgagggttggg--aaacattgtaaac 26403088  T
Q  150 accttgggt 158  Q
    |||||||||    
T  26403089 accttgggt 26403097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 5990333 - 5990427
Alignment:
Q  59 agagagagaaacttggat-tacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    |||||||||||||||||  |||||||  || |||| ||||||||||||||||  ||| |||| ||||||||||||||  |||||||||||||| |||||    
T  5990333 agagagagaaacttggaaatacaaagacggtaactttagggttgagtgtctt--tagtgaggttctcttgggttggg--aaacattgtaatcatcttgg 5990427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 9765617 - 9765720
Alignment:
Q  55 gcttagagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatcac 151  Q
    |||| ||||||||||||||| | ||||||||||| ||||  ||||||||||||||||| || |||| ||||||  ||||||||  ||||||||||| |||    
T  9765617 gctttgagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttg-agtgaggttctcttgagggttggg--aaacattgtaaacac 9765713  T
Q  152 cttgggt 158  Q
    |||||||    
T  9765714 cttgggt 9765720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 9054188 - 9054288
Alignment:
Q  57 ttagagagagaaacttggat-tacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttg 155  Q
    |||| ||||||||||||||  ||||||  ||| |||| |||| |||||||| ||||||| |||  |||||||||||||  |||||||| |||||||||||    
T  9054188 ttagggagagaaacttggaaatacaaataaggtaactttaggattgagtgtttttgtagtgagattctcttgggttgg--aaaacattataatcaccttg 9054285  T
Q  156 ggt 158  Q
    |||    
T  9054286 ggt 9054288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 26288070 - 26288004
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    |||||||||||||||||||||||||||  ||||| || |||||||| |||||  |||||| |||||||    
T  26288070 ttttagggttcatattgtgagagtggg-gaacacaaatgggtagaaactaggacttgttcttgtgtaa 26288004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 26301327 - 26301261
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    |||||||||||||||||||||||||||  ||||| || |||||||| |||||  |||||| |||||||    
T  26301327 ttttagggttcatattgtgagagtggg-gaacacaaatgggtagaaactaggacttgttcttgtgtaa 26301261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 26313321 - 26313255
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    |||||||||||||||||||||||||||  ||||| || |||||||| |||||  |||||| |||||||    
T  26313321 ttttagggttcatattgtgagagtggg-gaacacaaatgggtagaaactaggacttgttcttgtgtaa 26313255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 4731532 - 4731629
Alignment:
Q  59 agagagagaaacttggatta-caaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    ||||||||||||||| |  | ||||||||| |||| |||||||||| |||||||   ||||  |||||||||||||||||  |||||||| |||||||||    
T  4731532 agagagagaaacttgaaaaatcaaaggaggtaactttagggttgagggtctttgattagagt-tctcttgggttgggaaa--cattgtaaacaccttggg 4731628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 41266841 - 41266918
Alignment:
Q  59 agagagagaaactt-ggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttggga 135  Q
    |||||||||||| | ||||  |||| |||| |||| ||||||||| ||||||||  |||||| |||||||||||||||    
T  41266841 agagagagaaacctaggatatcaaatgaggtaactttagggttgaatgtctttggtgagaggttctcttgggttggga 41266918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 43036297 - 43036394
Alignment:
Q  59 agagagagaaacttggatta-caaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    ||||||||||||||||   | ||||||||| |||| |||||||||| |||||||   ||||  |||||||||||||||||  |||||||| |||||||||    
T  43036297 agagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagt-tctcttgggttgggaaa--cattgtaaacaccttggg 43036393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 5e-80; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 42 - 248
Target Start/End: Original strand, 1456952 - 1457157
Alignment:
Q  42 agagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaaca 141  Q
    |||| |||||||||||||||||||||| |||||||  |||||||||||||    ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  1456952 agagcttggaagagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaaca 1457050  T
Q  142 ttgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagag 241  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  1457051 ttgtaatcaccttgggttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag 1457150  T
Q  242 ttcttgt 248  Q
    |||||||    
T  1457151 ttcttgt 1457157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 53 - 248
Target Start/End: Complemental strand, 27445254 - 27445060
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    |||||||||||||||| |||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  27445254 gagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacc 27445156  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgt 248  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  27445155 ttgggttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgt 27445060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 53 - 248
Target Start/End: Complemental strand, 27450098 - 27449904
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    |||||||||||||||| |||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  27450098 gagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacc 27450000  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgt 248  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  27449999 ttgggttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgt 27449904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 53 - 248
Target Start/End: Complemental strand, 43592563 - 43592369
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    |||||||||||||||| |||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  43592563 gagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacc 43592465  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgt 248  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  43592464 ttgggttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgt 43592369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 53 - 248
Target Start/End: Complemental strand, 43599008 - 43598814
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    |||||||||||||||| |||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  43599008 gagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacc 43598910  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgt 248  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  43598909 ttgggttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgt 43598814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 53 - 248
Target Start/End: Complemental strand, 43604500 - 43604306
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    |||||||||||||||| |||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  43604500 gagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacc 43604402  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgt 248  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  43604401 ttgggttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgt 43604306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 53 - 248
Target Start/End: Complemental strand, 43609992 - 43609798
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    |||||||||||||||| |||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  43609992 gagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacc 43609894  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgt 248  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  43609893 ttgggttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgt 43609798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 15044956 - 15044791
Alignment:
Q  68 aacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggtt-gggaaaaacattgtaatcaccttgggttttagggt 166  Q
    |||||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  15044956 aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaaacattgtaatcaccttgggttttagggt 15044857  T
Q  167 tcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttga 232  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15044856 tcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttga 15044791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 35388032 - 35387893
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    ||||||||||||| |||| |||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35388032 tgttcttgtgcagattttggaag-agagcttggaagagcttagagagaaaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 35387934  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  35387933 gggtctcttgggttggaaaaaacattgtaatcaccttgggt 35387893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 38219768 - 38219629
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    ||||||||||||| |||| |||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  38219768 tgttcttgtgcagatttt-gaagaagagctttgaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtga 38219670  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    || ||||||||||||||||||||||||||| ||||||||||    
T  38219669 ggatctcttgggttgggaaaaacattgtaaacaccttgggt 38219629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 24136218 - 24136080
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    ||||||||||||  |||||| || |||| ||||||||||| |||||||||||||||||||||||||||||||||   ||||||||||||||||||||| |    
T  24136218 tgttcttgtgca--tttttggagtagagcttggaagagctaagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagaaa 24136121  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  24136120 gtgtctcttgggttgggaaaaacattgtaatcaccttgggt 24136080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 28807436 - 28807553
Alignment:
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggttt 213  Q
    ||||| || |||| |||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  28807436 gagagtgtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtag-atctagggttt 28807534  T
Q  214 gttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||    
T  28807535 gttcatgtgtaaagcttga 28807553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 47 - 158
Target Start/End: Complemental strand, 31180557 - 31180447
Alignment:
Q  47 ttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgta 146  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||   |||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  31180557 ttggaagagcttagagagagaa-cttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgta 31180459  T
Q  147 atcaccttgggt 158  Q
    ||||||||||||    
T  31180458 atcaccttgggt 31180447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 123 - 232
Target Start/End: Original strand, 37556494 - 37556601
Alignment:
Q  123 tcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtg 222  Q
    |||| ||||||||||| |||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  37556494 tcttaggttgggaaaa-cattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtag-ttctagggtttgttcatgtg 37556591  T
Q  223 taaagcttga 232  Q
    ||||||||||    
T  37556592 taaagcttga 37556601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 123 - 232
Target Start/End: Original strand, 37561316 - 37561423
Alignment:
Q  123 tcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtg 222  Q
    |||| ||||||||||| |||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  37561316 tcttaggttgggaaaa-cattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtag-ttctagggtttgttcatgtg 37561413  T
Q  223 taaagcttga 232  Q
    ||||||||||    
T  37561414 taaagcttga 37561423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 30631586 - 30631502
Alignment:
Q  159 tttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt 243  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| || |||||||    
T  30631586 tttagggttcatattgtgagagtggggaaacaccaaagggtagaatctatggtttgttcatgtgtaaagcttgaaggctagagtt 30631502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 28832585 - 28832486
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||    
T  28832585 ttagagagagaaacttggattacaaaggaggtaactttagagttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgg 28832488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 9353103 - 9353200
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  9353103 agagagagaaacttggattacaaaggaggtaactttagggttaagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 9353200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 14520556 - 14520461
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||    
T  14520556 agagagagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgg 14520461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 24553296 - 24553395
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||    
T  24553296 ttagagaaagaaacttggattacaaaggaggtaacttaagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgg 24553393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 158
Target Start/End: Complemental strand, 30631730 - 30631640
Alignment:
Q  68 aacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||| ||||||||||||||    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  30631730 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 30631640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 11916746 - 11916840
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  11916746 gagagaaacttggattacaaaggaggtaactttagggttgagtttctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 11916840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 33791542 - 33791423
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||  ||||||||| |||||| ||||||||| ||||||||||||  ||||||||    
T  33791542 gagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtag-gtctagggt 33791444  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||||    
T  33791443 ttgttcatgtgtaaagcttga 33791423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 11181603 - 11181700
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||| |||||||||||| |||| || |||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  11181603 agagagagaaacttggtttacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 11181700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 15464860 - 15464763
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||| |||| ||||||||||||||  |||||| |||| ||||||||||    
T  15464860 agagagagaaacttggattacaaagaaggaaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacatcgtaaacaccttgggt 15464763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 36932119 - 36932216
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||| || | ||||||||||||||  ||||||||||| ||||||||||    
T  36932119 agagagagaaacttggattgcaaaggagggaactttagggttgagtgtctttatagtgatgatctcttgggttggg--aaacattgtaaacaccttgggt 36932216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 31300364 - 31300463
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||| ||||||||| |||| || |||||||||||||||||| |||| |||||||||||  || ||||||||||| ||||||||    
T  31300364 ttagagagagaaacttggattgcaaaggaggtaactttaaggttgagtgtctttgtagtgaggttctcttgggtt--gagaaacattgtaaacaccttgg 31300461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 2785601 - 2785482
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||  ||||||||| |||||| ||||||||| ||||||||||||  ||||||||    
T  2785601 gagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtag-gtctagggt 2785503  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    ||||||||| |||||||||||    
T  2785502 ttgttcatgagtaaagcttga 2785482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 31180394 - 31180310
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt 243  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||| || |||||||    
T  31180394 ttttatggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttg-tcttgtgtaaagcttgaaggctagagtt 31180310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 17003730 - 17003827
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||  |||| ||||||||| ||||||||||| |||| ||||||||||| ||  ||||||||||| ||||||||||    
T  17003730 agagagagaaacttggattacaaaggagataactttagggttgaatgtctttgtagtgaggttctcttgggtttgg--aaacattgtaaacaccttgggt 17003827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 12083951 - 12084045
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||| ||| |||| |||||||||||||   ||||||| ||| ||||||||||    
T  12083951 gagagaaacttggattacaaaggaggtaactttagggttgagtgtctttatagtgaggatctcttgggttgg--taaacattttaaacaccttgggt 12084045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 42127139 - 42127238
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    |||||| |||||||||||||||||||||||| |||| || |||||||| ||||||||| |||| |||||||||||  || ||||||||||  ||||||||    
T  42127139 ttagagtgagaaacttggattacaaaggaggtaactttaaggttgagtatctttgtagtgaggttctcttgggtt--gagaaacattgtatacaccttgg 42127236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 156
Target Start/End: Original strand, 7160689 - 7160770
Alignment:
Q  73 ggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    |||||||||| |||| |||| ||||||||||||||||||||| |||| |||||||| |||||  ||||||||||||||||||||    
T  7160689 ggattacaaatgaggtaactttagggttgagtgtctttgtagtgaggttctcttggattggg--aaacattgtaatcaccttgg 7160770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 24136028 - 24135961
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||  |||||| |||||||    
T  24136028 ttttagggttcacattgtgagagtggggaaacaccaaagggtagaatctaggacttgttcttgtgtaa 24135961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 10282085 - 10281981
Alignment:
Q  55 gcttagagagagaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatcac 151  Q
    |||| |||||||||||||| || ||||||||||| |||| ||||||||||||||||||||| |||| ||||||  |||||| |  ||||||||||| |||    
T  10282085 gctttgagagagaaacttgagaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgtg--aaacattgtaaacac 10281988  T
Q  152 cttgggt 158  Q
    |||||||    
T  10281987 cttgggt 10281981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 31396850 - 31396971
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||  ||||||||| ||||||  ||||||||  ||||||||||| |||||||||    
T  31396850 gagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggatgggaaaatgccaaagggtag-atctagggt 31396948  T
Q  212 ttgt--tcatgtgtaaagcttga 232  Q
    || |  || ||||||||||||||    
T  31396949 tttttgtcttgtgtaaagcttga 31396971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 19589051 - 19588975
Alignment:
Q  79 caaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    ||||||||| || | ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| || ||||||    
T  19589051 caaaggaggtaattttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacatcttggg 19588975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 38192353 - 38192286
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||| || |||||||| |||||  |||||| |||||||    
T  38192353 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa 38192286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 38219578 - 38219511
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||| || |||||||| |||||  |||||| |||||||    
T  38219578 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa 38219511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 31401707 - 31401828
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||  ||||||||| ||||||  ||||||||  ||||||||||| |||||| ||    
T  31401707 gagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggatgggaaaatgccaaagggtag-atctagagt 31401805  T
Q  212 ttgt--tcatgtgtaaagcttga 232  Q
    || |  || ||||||||||||||    
T  31401806 tttttgtcttgtgtaaagcttga 31401828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 35387842 - 35387791
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagg 209  Q
    ||||||||||||||||||||||||||| |||||| || |||||||| |||||    
T  35387842 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactagg 35387791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 13488077 - 13488174
Alignment:
Q  59 agagagagaaacttggatta-caaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    ||||||||||||||||   | ||||||||| |||| |||||||||| |||||||   ||||  |||||||||||||  |||||||||||| |||||||||    
T  13488077 agagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagt-tctcttgggttgg--aaaacattgtaaacaccttggg 13488173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 232
Target Start/End: Complemental strand, 33768314 - 33768286
Alignment:
Q  204 tctagggtttgttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||||||||||||    
T  33768314 tctagggtttgttcatgtgtaaagcttga 33768286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 144; Significance: 8e-76; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 53 - 248
Target Start/End: Complemental strand, 11857258 - 11857064
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    |||||||||||||||| |||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  11857258 gagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacc 11857160  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgt 248  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  11857159 ttgggttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgt 11857064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 53 - 248
Target Start/End: Original strand, 22010498 - 22010692
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    |||||||||||||||| |||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  22010498 gagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacc 22010596  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgt 248  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  22010597 ttgggttttagggttcatattgtgagagtggggaaatatcaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgt 22010692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 14737378 - 14737566
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    |||||| ||||||||| ||||||| ||||||||||||||    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  14737378 gagctttgagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacc 14737476  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagt 242  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| || ||||||    
T  14737477 ttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatatgtaaagcttgaaggctagagt 14737566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 14742238 - 14742426
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    |||||| ||||||||| ||||||| ||||||||||||||    ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||     
T  14742238 gagctttgagagagaa-cttggataacaaaggagggaaccaatgggttaagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcact 14742336  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagt 242  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| || ||||||    
T  14742337 ttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatatgtaaagcttgaaggctagagt 14742426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 96 - 242
Target Start/End: Complemental strand, 28184749 - 28184600
Alignment:
Q  96 gggttgagtgtctttgtagagagggtctcttgggttggg---aaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacacc 192  Q
    |||||||| |||||||| ||||| |||||||||||| ||   |||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||    
T  28184749 gggttgagggtctttgttgagagtgtctcttgggtttgggaaaaaaacatagtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatacc 28184650  T
Q  193 aaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagt 242  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||    
T  28184649 aaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagt 28184600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 5674495 - 5674633
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    ||||||||||||| |||  | ||||||| ||||||||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||    
T  5674495 tgttcttgtgcagattt--ggaggagagcttggaagagcttagagagataaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagaga 5674592  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  5674593 gtgtctcttgggttgggaaaaacattgtaatcaccttgggt 5674633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 28155432 - 28155549
Alignment:
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggttt 213  Q
    ||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  28155432 gagagtgtttcttaggttgggaaaaacattgtaatcaccttgggatttagggttcatagtgtgagagtgggaaaataccaaagggtag-atctagggttt 28155530  T
Q  214 gttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||    
T  28155531 gttcatgtgtaaagcttga 28155549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 6438723 - 6438606
Alignment:
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggttt 213  Q
    ||||| || |||| |||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||  ||||||||||    
T  6438723 gagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtag-ttctagggttt 6438625  T
Q  214 gttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||    
T  6438624 gttcatgtgtaaagcttga 6438606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 22709378 - 22709241
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagctt--agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtaga 115  Q
    ||||||||||||| |||| || | |||||||||||||| ||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  22709378 tgttcttgtgcagattttgga-gtagagtttggaagagtttgaagagagaaaaacttggattacaaaggagggaactctagggttgagtgtctttgtagt 22709280  T
Q  116 gagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    |||| ||||||||||||||  ||||||||||| ||||||||    
T  22709279 gaggatctcttgggttggg--aaacattgtaaacaccttgg 22709241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 16838970 - 16838851
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||||||||||||| ||||||  |||||||| |||||||||||| |||||||||    
T  16838970 gagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtag-atctagggt 16838872  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||||    
T  16838871 ttgttcatgtgtaaagcttga 16838851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 31936903 - 31936804
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||| |||| ||| ||||||||||  ||||||||||| ||||||||    
T  31936903 ttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggttggg--aaacattgtaaacaccttgg 31936806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 6005643 - 6005524
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||  ||||||||| |||||| ||||||||| ||||||||||||  ||||||||    
T  6005643 gagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtag-gtctagggt 6005545  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||||    
T  6005544 ttgttcatgtgtaaagcttga 6005524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 33330304 - 33330423
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||||||||||||| ||||||  |||||||| |||||||||||| |||||||||    
T  33330304 gagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtag-atctagggt 33330402  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    ||  |||||||||||||||||    
T  33330403 tttgtcatgtgtaaagcttga 33330423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 33335801 - 33335920
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||||||||||||| ||||||  |||||||| |||||||||||| |||||||||    
T  33335801 gagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtag-atctagggt 33335899  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    ||  |||||||||||||||||    
T  33335900 tttgtcatgtgtaaagcttga 33335920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 5757249 - 5757346
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||   ||| ||||||||||||||  ||||||||||| ||||||||||    
T  5757249 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtatttaggatctcttgggttggg--aaacattgtaaacaccttgggt 5757346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 5572012 - 5572111
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||||||| ||||| |||| |||||||| |||||||||||| | || ||||||||||||||  ||||||||||| ||||||||    
T  5572012 ttagagagagaaacttggattacaatggaggtaactttagggttgggtgtctttgtagtggggatctcttgggttggg--aaacattgtaaacaccttgg 5572109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 159
Target Start/End: Original strand, 31086245 - 31086343
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||||||||| |||| |||||| ||||  || ||||||||||| ||||||||||    
T  31086245 agagagagaaacttggattacaaagggggtaactttagggttgagtgtctttgtagtgaggatctcttaggtt--gagaaacattgtaaacaccttgggt 31086342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 158
Target Start/End: Original strand, 5017271 - 5017364
Alignment:
Q  63 agagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||| |||  |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  5017271 agagaaacttggattacaaacgagataactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 5017364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 31979840 - 31979741
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||| | ||||||||| |||| ||||||||||||||||||||| |||| ||| |||||||  || ||||||||||| ||||||||    
T  31979840 ttagagagagaaacttggactgcaaaggaggtaactttagggttgagtgtctttgtagtgaggttcttttgggtt--gagaaacattgtaaacaccttgg 31979743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 18234409 - 18234334
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttggg 134  Q
    ||||| ||||||||||||||||||||||| | || ||||||||||||||||||||| |||| ||||||||||||||    
T  18234409 agagaaagaaacttggattacaaaggaggtagctttagggttgagtgtctttgtagtgaggatctcttgggttggg 18234334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 10076962 - 10077027
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctc 124  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||    
T  10076962 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctc 10077027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 24435743 - 24435839
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||| ||||||||||||||  |||| ||||||||||||||||||| | |||| ||||||| ||||||  ||||||||||| ||||||||||    
T  24435743 agagagagaaactaggattacaaaggagataactttagggttgagtgtctttgt-gtgaggttctcttgagttggg--aaacattgtaaacaccttgggt 24435839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 5674685 - 5674736
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagg 209  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5674685 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagg 5674736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 21272763 - 21272838
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaa 137  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||||||||||| |||| |||||||||||| ||||    
T  21272763 gagagaaactttgattacaaagggggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgcgaaa 21272838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 22964023 - 22963928
Alignment:
Q  61 agagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||| ||||||||| |||  |||| ||||||||||||||||||||| || | |||||||| |||||  ||||||||||| ||||||||||    
T  22964023 agagagaaactttgattacaaaagagctaactttagggttgagtgtctttgtagtgaagatctcttggattggg--aaacattgtaaacaccttgggt 22963928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 23824370 - 23824465
Alignment:
Q  61 agagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||| ||||||||| |||  |||| ||||||||||||||||||||| || | |||||||| |||||  ||||||||||| ||||||||||    
T  23824370 agagagaaactttgattacaaaagagctaactttagggttgagtgtctttgtagtgaagatctcttggattggg--aaacattgtaaacaccttgggt 23824465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 21801108 - 21801212
Alignment:
Q  55 gcttagagagagaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatcac 151  Q
    |||| |||||||||||||| || ||||||| ||| ||||  |||||||||||||||||||| |||| ||||||  ||||||||  ||||||||||| |||    
T  21801108 gctttgagagagaaacttgagaatacaaagcaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttggg--aaacattgtaaacac 21801205  T
Q  152 cttgggt 158  Q
    |||||||    
T  21801206 cttgggt 21801212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 22709188 - 22709121
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||| || |||||||| |||||  |||||| |||||||    
T  22709188 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa 22709121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 23896678 - 23896628
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctt 109  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||||||||||    
T  23896678 agagagagaaacttggattacaaaggaggtaactttagagttgagtgtctt 23896628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 14522007 - 14521903
Alignment:
Q  55 gcttagagagagaaactt-ggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatcac 151  Q
    |||| ||||||||||| | ||| |||||| |||| |||| ||||||| | |||||||||||  ||| ||||||  ||||||||  ||||||||||| |||    
T  14522007 gctttgagagagaaacctaggaatacaaatgaggtaactttagggtttaatgtctttgtagttaggttctcttgagggttggg--aaacattgtaaacac 14521910  T
Q  152 cttgggt 158  Q
    |||||||    
T  14521909 cttgggt 14521903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 31076706 - 31076762
Alignment:
Q  59 agagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtag 114  Q
    ||||| |||||||||| | ||||||||||  |||| |||||||||||||||||||||    
T  31076706 agagaaagaaacttgggaatacaaaggagataactatagggttgagtgtctttgtag 31076762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 53 - 248
Target Start/End: Complemental strand, 12397195 - 12397001
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    |||||||||||||||| |||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  12397195 gagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacc 12397097  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgt 248  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| || | || ||||||||||||    
T  12397096 ttgggttttagggttcatattgtgatagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagattaaaggctagagttcttgt 12397001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 96 - 248
Target Start/End: Complemental strand, 12406573 - 12406421
Alignment:
Q  96 gggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaa 195  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  12406573 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggcttttagggttcatattgtgagagtggggaaacaccaaa 12406474  T
Q  196 gggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgt 248  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  12406473 gggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgt 12406421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 31109389 - 31109573
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactcta-gggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    ||||||| ||||||||||  |||||||||||||  || ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  31109389 agagagaaaaacttggatagcaaaggagggaaccatatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 31109488  T
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagt 242  Q
    |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||| || ||||||    
T  31109489 ttttagggttcatagtgtgagagtgggaaaatatcaaagggtagaatctagggtttgttcatgtgcaaagcttgaaggctagagt 31109573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 24024128 - 24024316
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    |||||| ||||||||| |||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  24024128 gagctttgagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttggaaaaacattgtaatcacc 24024226  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagt 242  Q
     |||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  24024227 gtgggttttagggttcatcgtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagt 24024316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 21640164 - 21640039
Alignment:
Q  33 ttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttg 132  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21640164 ttttgaaggagagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttg 21640065  T
Q  133 ggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||| ||||||||||    
T  21640064 ggaaaaacattgtaaacaccttgggt 21640039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 18414008 - 18413869
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    ||||||||||||| |||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  18414008 tgttcttgtgcagattttgga-ggagagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtga 18413910  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    || ||||||||||||||||||||| ||||| ||||||||||    
T  18413909 ggatctcttgggttgggaaaaacaatgtaaacaccttgggt 18413869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 18409118 - 18408993
Alignment:
Q  33 ttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttg 132  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  18409118 ttttggaggagagcttggaagagcttagagagagaaacttagattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttg 18409019  T
Q  133 ggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||| ||||||||||    
T  18409018 ggaaaaacattgtaaacaccttgggt 18408993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 34 - 158
Target Start/End: Original strand, 1533183 - 1533307
Alignment:
Q  34 tttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgg 133  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||    
T  1533183 tttgagggagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgg 1533282  T
Q  134 gaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||    
T  1533283 gaaaaacattgtaatcaccttgggt 1533307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 21646353 - 21646237
Alignment:
Q  42 agagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaaca 141  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21646353 agagcttggaagagcttagagagagaaacttagattacaaaggaggaaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaaca 21646254  T
Q  142 ttgtaatcaccttgggt 158  Q
    |||||| ||||||||||    
T  21646253 ttgtaaacaccttgggt 21646237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 41 - 158
Target Start/End: Complemental strand, 2058318 - 2058202
Alignment:
Q  41 gagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaac 140  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||||||||||    
T  2058318 gagagcttggaagagcttagagagagaa-cttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaac 2058220  T
Q  141 attgtaatcaccttgggt 158  Q
    ||||||||||||||||||    
T  2058219 attgtaatcaccttgggt 2058202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 158
Target Start/End: Original strand, 20357285 - 20357410
Alignment:
Q  32 tttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggtt 131  Q
    |||||||||||||| |||| ||||||||| ||||||| ||||||| ||||||||||||||   |||||||||||||||||| ||||| ||||||||||||    
T  20357285 tttttgaaggagagcttggtagagcttagtgagagaa-cttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggtt 20357383  T
Q  132 gggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||||    
T  20357384 gggaaaaacattgtaatcaccttgggt 20357410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 41 - 156
Target Start/End: Complemental strand, 4873424 - 4873310
Alignment:
Q  41 gagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaac 140  Q
    ||||| |||||||||||||||||||||| ||||||| ||||||||||||||    ||||||||||||||||| ||||| |||||||||||||||||||||    
T  4873424 gagagcttggaagagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 4873326  T
Q  141 attgtaatcaccttgg 156  Q
    ||||||||||||||||    
T  4873325 attgtaatcaccttgg 4873310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 132 - 232
Target Start/End: Complemental strand, 19992518 - 19992419
Alignment:
Q  132 gggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttg 231  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  19992518 gggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtag-ttctagggtttgttcatgtgtaaagcttg 19992420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 132 - 230
Target Start/End: Original strand, 21812118 - 21812215
Alignment:
Q  132 gggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagctt 230  Q
    |||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  21812118 gggaaaaacattgtaatcaccttgggattatgggttcatagtgtgagagtgggaaaataccaaagggtag-atctagggtttgttcatgtgtaaagctt 21812215  T

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Target: chr7; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 53 - 158
Target Start/End: Original strand, 46516070 - 46516173
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||| ||||||  ||||||||||| ||||    
T  46516070 gagcttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgagttggg--aaacattgtaaacacc 46516167  T
Q  153 ttgggt 158  Q
    ||||||    
T  46516168 ttgggt 46516173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 2479662 - 2479565
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  2479662 agagagagaaacttggattacaaaggagggaactttagggttgagtgtctttatagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 2479565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 23402784 - 23402881
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  23402784 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 23402881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 20284415 - 20284318
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||| |||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  20284415 agagagagaaacttggattataaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 20284318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 44847896 - 44847991
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    |||||||||||||||||||| |||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||    
T  44847896 agagagagaaacttggattataaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgg 44847991  T

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Target: chr7; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 21989231 - 21989137
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||| |||| |||| |||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  21989231 gagagaaacttggattacaaaggaggtaactttaggtttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 21989137  T

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Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 2580717 - 2580619
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| | |||| |||||||||||||  |||||||||||| ||||||||    
T  2580717 ttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttgt-gtgaggttctcttgggttgg--aaaacattgtaaacaccttgg 2580621  T

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Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 2647466 - 2647565
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||| ||||||||||  |||| ||||||||||||||||||||| |||| ||||||||||||||  |||||| |||| ||||||||    
T  2647466 ttagagagagaaacttggactacaaaggagataactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacatggtaagcaccttgg 2647563  T

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Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 4796443 - 4796536
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||| |||| |||| |||||||||||||||| |||| |||||||||||||  |||||||||||| ||||||||||    
T  4796443 gagagaaacttggattacaaaggaggtaactttagg-ttgagtgtctttgtagtgaggatctcttgggttgg--aaaacattgtaaacaccttgggt 4796536  T

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Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 3047581 - 3047502
Alignment:
Q  59 agagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaa 137  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  3047581 agagagagaaacttgggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgggaaa 3047502  T

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Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 49092015 - 49091917
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||||||||||  |||| | ||||||||||||  |||||||| || ||||||||||    
T  49092015 agagagagaaacttggattacaaaggaggtaactttaaggttgagtgtctttgtactgaggatatcttgggttggg--aaacattgaaaacaccttgggt 49091918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 47263992 - 47263895
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||| |||||||| |||| ||||||||||||||||||||| |||  |||||| |||||||  |||||||||||  |||||||||    
T  47263992 agagagagaaacttggattataaaggaggtaactttagggttgagtgtctttgtagtgagaatctcttcggttggg--aaacattgtaaataccttgggt 47263895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 1533359 - 1533410
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1533359 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagg 1533410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 9189775 - 9189875
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtg-tctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttg 155  Q
    ||||||||||||||||||||| ||||||||  |||| |||||||||||| |||||||||  ||| ||||||||||||||  ||||||||||| |||||||    
T  9189775 ttagagagagaaacttggattgcaaaggagataactttagggttgagtgttctttgtagtaaggttctcttgggttggg--aaacattgtaaacaccttg 9189872  T
Q  156 ggt 158  Q
    |||    
T  9189873 ggt 9189875  T

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Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 9184943 - 9185042
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    |||||||||||||| | |||| ||||||||| |||| ||||||||||| |||||||||  ||| ||||||||||||||  ||||||||||| ||||||||    
T  9184943 ttagagagagaaacattgattgcaaaggaggtaactttagggttgagtatctttgtagtaaggttctcttgggttggg--aaacattgtaaacaccttgg 9185040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 33332221 - 33332318
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||||| |||||||  ||| |||||||||||  || ||||||||||| || |||||||    
T  33332221 agagatagaaacttggattacaaaggaggtaactttagggttgagtgtttttgtagtaaggttctcttgggtt--gagaaacattgtaaacatcttgggt 33332318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 79714 - 79640
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgg 133  Q
    ||||||||||||||||||||||||||||| |||| || | |||||||||||||||| |||| ||| |||||||||    
T  79714 agagagagaaacttggattacaaaggaggtaactttaagattgagtgtctttgtagtgaggatcttttgggttgg 79640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 20357463 - 20357537
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttga 232  Q
    ||||||||||||||||||||||||||| ||||||  | |||||||||||||||  ||||| ||||||||||||||    
T  20357463 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcatgttcttgtgtaaagcttga 20357537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 5817036 - 5817137
Alignment:
Q  55 gcttagagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacct 153  Q
    |||||||||||||||||||| | ||||||||||| |||| || |||||||||||||||||| |||| ||| || |||||||  |||||||||||  ||||    
T  5817036 gcttagagagagaaacttgggaatacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctatttggttggg--aaacattgtaaatacct 5817133  T
Q  154 tggg 157  Q
    ||||    
T  5817134 tggg 5817137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 21639988 - 21639921
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||| || ||||||||||||||  |||||| |||||||    
T  21639988 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa 21639921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 21646186 - 21646119
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||| || ||||||||||||||  |||||| |||||||    
T  21646186 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa 21646119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 29160141 - 29160034
Alignment:
Q  52 agagcttagagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaat 148  Q
    ||||||| ||||||||||||||| | ||||||||||| |||| | ||||||||||||||| ||| |||| ||||||  ||||||||  |||||||||||     
T  29160141 agagctttgagagagaaacttgggaatacaaaggaggtaacttttgggttgagtgtctttatagtgaggttctcttgagggttggg--aaacattgtaaa 29160044  T
Q  149 caccttgggt 158  Q
    ||||||||||    
T  29160043 caccttgggt 29160034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 24266061 - 24266180
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||  ||||||||| ||||||  |||||||  ||||||||||||  ||||||||    
T  24266061 gagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtag-gtctagggt 24266159  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    ||  || ||||||||||||||    
T  24266160 tttgtcttgtgtaaagcttga 24266180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 2058147 - 2058079
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacacca-aagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| ||||| || | ||||||||||||||| |||||| |||||||    
T  2058147 ttttagggttcatattgtgagagtggggaaacaacatatgggtagaatctagggcttgttcttgtgtaa 2058079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18408943 - 18408876
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||| || |||||||| |||||  |||||| |||||||    
T  18408943 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa 18408876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18413819 - 18413752
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||| || |||||||| |||||  |||||| |||||||    
T  18413819 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa 18413752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 232
Target Start/End: Original strand, 24261191 - 24261301
Alignment:
Q  123 tcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatg 220  Q
    |||| |||||||||||  |||||||||||| |||||| ||  ||||||||| ||||||  |||||||  ||||||||||||  ||||||||||  || ||    
T  24261191 tcttaggttgggaaaacaacattgtaatcatcttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtag-gtctagggttttgtcttg 24261289  T
Q  221 tgtaaagcttga 232  Q
    ||||||||||||    
T  24261290 tgtaaagcttga 24261301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 21983578 - 21983541
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggt 99  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  21983578 gagagaaacttggattacaaaggaggtaactttagggt 21983541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 38671495 - 38671419
Alignment:
Q  79 caaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||| |||| |||||||||| |||||||   ||||  |||||||||||||||||  |||||||| ||||||||||    
T  38671495 caaaggaggtaactttagggttgagggtctttgattagagt-tctcttgggttgggaaa--cattgtaaacaccttgggt 38671419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 1e-68; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 53 - 248
Target Start/End: Complemental strand, 51520741 - 51520547
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    |||||||||||||||| |||||||   ||||||||||||    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  51520741 gagcttagagagagaa-cttggatagaaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacc 51520643  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgt 248  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  51520642 ttgggttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgt 51520547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 53 - 246
Target Start/End: Original strand, 9224208 - 9224400
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    |||||||||||||||| |||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||| || |||||||||||||||||    
T  9224208 gagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaacattgtaatcacc 9224306  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttctt 246  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||    
T  9224307 ttgggttttagggttcatagtgtgagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagttctt 9224400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 53 - 246
Target Start/End: Original strand, 9228995 - 9229187
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    |||||||||||||||| |||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||| || |||||||||||||||||    
T  9228995 gagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaacattgtaatcacc 9229093  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttctt 246  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||    
T  9229094 ttgggttttagggttcatagtgtgagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagttctt 9229187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 114 - 248
Target Start/End: Original strand, 45347678 - 45347812
Alignment:
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggttt 213  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  45347678 gagagtgtctcttaggttgggaaaaacattgtaatcaccttggggtttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggttt 45347777  T
Q  214 gttcatgtgtaaagcttgagggttagagttcttgt 248  Q
    ||||||||||||||||||| || ||||| ||||||    
T  45347778 gttcatgtgtaaagcttgaaggctagaggtcttgt 45347812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 24742312 - 24742174
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    ||||||||||||| ||| |  ||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  24742312 tgttcttgtgcagatttgt--aggagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagaga 24742215  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  24742214 gtgtctcttgggttgggaaaaacattgtaatcaccttgggt 24742174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 28468265 - 28468404
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    ||||||||||||| |||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  28468265 tgttcttgtgcagattttgga-ggagagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttaagtgtctttgtagtga 28468363  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    || ||||||||||||||||||| ||||||| ||||||||||    
T  28468364 ggatctcttgggttgggaaaaatattgtaaacaccttgggt 28468404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 45357158 - 45357276
Alignment:
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggttt 213  Q
    ||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  45357158 gagagagtttcttaggttgggaaaaacattgtaatcaccttggggtttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggttt 45357257  T
Q  214 gttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||    
T  45357258 gttcatgtgtaaagcttga 45357276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 103 - 232
Target Start/End: Complemental strand, 3814257 - 3814129
Alignment:
Q  103 gtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtaga 202  Q
    |||||||||  ||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||     
T  3814257 gtgtctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtag- 3814159  T
Q  203 atctagggtttgttcatgtgtaaagcttga 232  Q
    ||||||||||||||||||||||||||||||    
T  3814158 atctagggtttgttcatgtgtaaagcttga 3814129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 40 - 158
Target Start/End: Complemental strand, 29760993 - 29760874
Alignment:
Q  40 ggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttggga-aaa 138  Q
    |||||| |||||||| ||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||||| |||    
T  29760993 ggagagcttggaagaacttagagtgagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaa 29760894  T
Q  139 acattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||    
T  29760893 acattgtaatcaccttgggt 29760874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 5732887 - 5732770
Alignment:
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggttt 213  Q
    ||||| || |||| |||||||||||||||||||||||||||||| || |||||| ||| |||||||||||||||| |||||||||||| |||||||||||    
T  5732887 gagagtgtttcttaggttgggaaaaacattgtaatcaccttgggattaagggtttatagtgtgagagtgggaaaataccaaagggtag-atctagggttt 5732789  T
Q  214 gttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||    
T  5732788 gttcatgtgtaaagcttga 5732770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 18855949 - 18855832
Alignment:
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggttt 213  Q
    ||||| || |||| |||||||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||| ||||||||||||  ||||||||||    
T  18855949 gagagagtttcttaggttgggaaaaacattgtaatcaccttgggattgtgggttcatagtgtgagagtgggaaaataccaaagggtag-ttctagggttt 18855851  T
Q  214 gttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||    
T  18855850 gttcatgtgtaaagcttga 18855832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 3777875 - 3777778
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  3777875 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 3777778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 16623064 - 16623161
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  16623064 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 16623161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 5268971 - 5269066
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||    
T  5268971 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgg 5269066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 5396442 - 5396539
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  5396442 agagagagaaacttggattacaaaggaggttactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 5396539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 10047707 - 10047610
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||  |||| ||||||||||||||  ||||||||||| ||||||||||    
T  10047707 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtaatgaggatctcttgggttggg--aaacattgtaaacaccttgggt 10047610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 31985404 - 31985501
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  |||| ||||||||||||||  ||||||||||| ||||||||||    
T  31985404 agagagagaaacttggattacaaaggagggaactttagggttgagtgtttttgtattgaggatctcttgggttggg--aaacattgtaaacaccttgggt 31985501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 25861802 - 25861898
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttg 155  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| |||||||    
T  25861802 ttagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttg 25861898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 6743186 - 6743283
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| ||||  ||| |||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  6743186 agagagagaaacttggattacaaaggaggtaacttgaggtttgagtgtctttgtagcgaggatctcttgggttggg--aaacattgtaaacaccttgggt 6743283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 16628643 - 16628740
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  16628643 agagagagaaaattggattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 16628740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 164
Target Start/End: Original strand, 18712581 - 18712677
Alignment:
Q  68 aacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagg 164  Q
    |||||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  18712581 aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgttatcaccttgggttttagg 18712677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 36315001 - 36315098
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||||| ||||||||||||||  ||||||||||| ||| ||||||    
T  36315001 agagagataaacttggattacaaaggaggtaactttagggtttagtgtctttgtagagaggatctcttgggttggg--aaacattgtaaacacattgggt 36315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 36329210 - 36329307
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||||| ||||||||||||||  ||||||||||| ||| ||||||    
T  36329210 agagagataaacttggattacaaaggaggtaactttagggtttagtgtctttgtagagaggatctcttgggttggg--aaacattgtaaacacattgggt 36329307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 24742121 - 24742054
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  24742121 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa 24742054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 8689270 - 8689345
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaa 137  Q
    |||||||||||||||||||||||||| |||| ||||||| ||||||||||||| |||| |||||||||||||||||    
T  8689270 gagagaaacttggattacaaaggaggtaactttagggtttagtgtctttgtagtgaggatctcttgggttgggaaa 8689345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 54867505 - 54867431
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgg 133  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||  |||||||||||||    
T  54867505 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgagaatctcttgggttgg 54867431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 5143582 - 5143508
Alignment:
Q  63 agagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaa 137  Q
    |||||||||||||||||| |||||| |||| ||||||||||||||||||||| |||| |||||||| ||||||||    
T  5143582 agagaaacttggattacagaggaggtaactttagggttgagtgtctttgtagtgaggatctcttggattgggaaa 5143508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 42599344 - 42599442
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    |||| |||||||||||||||||||||||||| |||| || |||||||||||||||||| |||| |||||| |||||||  ||||||| ||| ||||||||    
T  42599344 ttagtgagagaaacttggattacaaaggaggtaacttta-ggttgagtgtctttgtagtgaggttctcttcggttggg--aaacattctaaacaccttgg 42599440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 5112564 - 5112466
Alignment:
Q  59 agagagagaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    ||||||||||||||| |||||||||||||| || | |||| |||||||||||||| | |||| ||||||||||||||  ||||||||||| |||||||||    
T  5112564 agagagagaaacttgagattacaaaggaggtaattttaggtttgagtgtctttgttgtgaggttctcttgggttggg--aaacattgtaaacaccttggg 5112467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 6542480 - 6542378
Alignment:
Q  55 gcttagagagagaaactt-ggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacct 153  Q
    |||| ||||||||||| | ||| ||||||||||| |||| ||||||||||||||||||||  |||| ||||||||||||||  ||||||||||| |||||    
T  6542480 gctttgagagagaaacctaggaatacaaaggaggtaactttagggttgagtgtctttgtaatgaggttctcttgggttggg--aaacattgtaaacacct 6542383  T
Q  154 tgggt 158  Q
    |||||    
T  6542382 tgggt 6542378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 51336933 - 51337035
Alignment:
Q  55 gcttagagagagaaactt-ggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacct 153  Q
    |||| ||||||||||||| ||| ||||||||| | |||| ||||||||| ||||||||||| |||| |||||||||||||  |||||||||||| |||||    
T  51336933 gctttgagagagaaacttaggaatacaaaggaagtaactttagggttgaatgtctttgtagtgaggttctcttgggttgg--aaaacattgtaaacacct 51337030  T
Q  154 tgggt 158  Q
    |||||    
T  51337031 tgggt 51337035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 38152208 - 38152306
Alignment:
Q  59 agagagagaaactt-ggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    ||||||||||| || |||||||||| |||| |||| ||||||||||||||||||||| |||| ||||||||| ||||  ||| ||||||| |||||||||    
T  38152208 agagagagaaaatttggattacaaatgaggtaactttagggttgagtgtctttgtagtgaggatctcttgggatggg--aaatattgtaaacaccttggg 38152305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 5148001 - 5147926
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaa 137  Q
    ||||||||||||||||||| |||||| |||| ||||||| |||||||||||||  ||| ||||||| |||||||||    
T  5148001 gagagaaacttggattacacaggaggtaactttagggtttagtgtctttgtagtaaggatctcttgagttgggaaa 5147926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 3793843 - 3793948
Alignment:
Q  54 agcttagagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatca 150  Q
    ||||| ||||||||||||||| | || |||||||| |||| ||||||||||||||||| ||| |||| ||||||  |||||||  |||||||||||| ||    
T  3793843 agctttgagagagaaacttgggaatataaaggaggtaactttagggttgagtgtctttatagtgaggttctcttgagggttgg--aaaacattgtaaaca 3793940  T
Q  151 ccttgggt 158  Q
    ||||||||    
T  3793941 ccttgggt 3793948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 29760821 - 29760772
Alignment:
Q  160 ttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagg 209  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  29760821 ttagggttcatagtgtgagagtggggaaacaccaaagggtagaatctagg 29760772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 24334144 - 24334040
Alignment:
Q  55 gcttagagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttg--ggttgggaaaaacattgtaatcac 151  Q
    |||| ||||||||||||||| | ||||||| ||| |||| |||||||||| |||||||||| |||| |||||||  ||||||||||  |||||||| |||    
T  24334144 gctttgagagagaaacttgggaatacaaagaaggtaactttagggttgagagtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacac 24334047  T
Q  152 cttgggt 158  Q
    |||||||    
T  24334046 cttgggt 24334040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 39774075 - 39774173
Alignment:
Q  59 agagagagaaacttggatt-acaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    |||||||||||||||| || |||||||||| |||| ||||||||||  | ||||||  |||| ||||||| ||||||  ||||||||||| |||||||||    
T  39774075 agagagagaaacttgggtttacaaaggaggtaactttagggttgagattatttgtaacgaggttctcttgagttggg--aaacattgtaaacaccttggg 39774172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 28468455 - 28468506
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagg 209  Q
    ||||||||||||||||| ||||||||| |||||| || ||||||||||||||    
T  28468455 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctagg 28468506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 1983070 - 1983144
Alignment:
Q  59 agagagagaaacttggatt-acaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttg 132  Q
    ||||||||| |||||| || |||||| ||| |||| ||||||||||||||||||||| |||| | ||||||||||    
T  1983070 agagagagagacttgggtttacaaagaaggtaactttagggttgagtgtctttgtagtgaggttatcttgggttg 1983144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 6677362 - 6677420
Alignment:
Q  79 caaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaa 137  Q
    ||||||||| |||| |||||||||||||||||||  || || |||||||||||||||||    
T  6677362 caaaggaggtaactttagggttgagtgtctttgttcaggggttctcttgggttgggaaa 6677420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 56146664 - 56146706
Alignment:
Q  206 tagggtttgttcatgtgtaaagcttgagggttagagttcttgt 248  Q
    ||||||||||||||||||||||||||| || ||||||||||||    
T  56146664 tagggtttgttcatgtgtaaagcttgaaggctagagttcttgt 56146706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 4587823 - 4587929
Alignment:
Q  52 agagcttagagagagaaactt-ggattacaaaggagggaactctagggttgagtgtcttt-gtagagagggtctcttgggttgggaaaaacattgtaatc 149  Q
    |||||||  |||||||||| | ||| |||||| |||  |||| ||||||| ||||||||| |||| |||| |||| |||||||||  ||||||||||| |    
T  4587823 agagcttcaagagagaaacctaggaatacaaatgagataactttagggttaagtgtcttttgtagtgaggttctcatgggttggg--aaacattgtaaac 4587920  T
Q  150 accttgggt 158  Q
    |||||||||    
T  4587921 accttgggt 4587929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 48142916 - 48143013
Alignment:
Q  59 agagagagaaacttggatta-caaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    ||||||||||||||||   | ||||||||| |||| |||||||||| |||||||   ||||  |||||||||||||||||  |||||||| |||||||||    
T  48142916 agagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagt-tctcttgggttgggaaa--cattgtaaacaccttggg 48143012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 48893920 - 48893839
Alignment:
Q  77 tacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||| || |  |||||||||||||||||||| |||| ||||||  ||||| ||  ||||||||||| ||||||||||    
T  48893920 tacaaaggaggtaatttgagggttgagtgtctttgtagtgaggttctctttagggtttgg--aaacattgtaaacaccttgggt 48893839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 52082951 - 52082854
Alignment:
Q  59 agagagagaaacttggatta-caaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    ||||||||||||||||   | ||||||||| |||| |||||||||| |||||||   ||||  |||||||||||||||||  |||||||| |||||||||    
T  52082951 agagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagt-tctcttgggttgggaaa--cattgtaaacaccttggg 52082855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 3e-66; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 53 - 248
Target Start/End: Original strand, 22172996 - 22173190
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    ||||||||| |||||| |||||||  ||||| |||||||    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  22172996 gagcttagaaagagaa-cttggatagcaaagtagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacc 22173094  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgt 248  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  22173095 ttgggttttagggttcatattaggagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgt 22173190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 9091026 - 9091164
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  9091026 tgttcttgtgc--ttttttgaaggagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagaga 9091123  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |  ||||||||||||||||||||||||||||||||||||||    
T  9091124 gtatctcttgggttgggaaaaacattgtaatcaccttgggt 9091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 1306318 - 1306179
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    |||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||    
T  1306318 tgttcttgtgcagtttttgga-ggagagcttggaagagcttagagagagaaacttggattataaaggagggaactctagagttgagtgtctttgtagtga 1306220  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    || ||||||||||||||||||||||||||| ||||||||||    
T  1306219 ggatctcttgggttgggaaaaacattgtaaacaccttgggt 1306179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 2671311 - 2671449
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    ||||||||||||| ||| ||||  |||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  2671311 tgttcttgtgcagatttgtgaa--agagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagaga 2671408  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  2671409 gtgtctcttgggttgggaaaaacattgtaatcaccttgggt 2671449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 8738788 - 8738926
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    |||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    ||||||||||||||||||||||    
T  8738788 tgttcttgtgc--ttttttgaaggagagcttggaagagcttagagagagaaacttggattgcaaaggagggaaccaatgggttgagtgtctttgtagaga 8738885  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |  ||||||||||||||||||||||||||||||||||||||    
T  8738886 gtatctcttgggttgggaaaaacattgtaatcaccttgggt 8738926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 41 - 158
Target Start/End: Original strand, 40372542 - 40372659
Alignment:
Q  41 gagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaac 140  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||||||||||    
T  40372542 gagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaac 40372641  T
Q  141 attgtaatcaccttgggt 158  Q
    ||||||||||||||||||    
T  40372642 attgtaatcaccttgggt 40372659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 32 - 158
Target Start/End: Complemental strand, 8477724 - 8477598
Alignment:
Q  32 tttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggtt 131  Q
    |||||| | ||||| |||||||||||||||||||||||||||||||||| ||||||||||   |||||||||||||||||||||||| ||||||||||||    
T  8477724 tttttggaagagagcttggaagagcttagagagagaaacttggattacagaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggtt 8477625  T
Q  132 gggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||||    
T  8477624 gggaaaaacattgtaatcaccttgggt 8477598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 7167595 - 7167478
Alignment:
Q  42 agagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttggga-aaaac 140  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||| ||||| |||||||||||||||| |||||    
T  7167595 agagcttggaagagcttagagagagaaacttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaaac 7167496  T
Q  141 attgtaatcaccttgggt 158  Q
    ||||||||||||||||||    
T  7167495 attgtaatcaccttgggt 7167478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 28503585 - 28503727
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagaga---aacttggattacaaaggagggaactcta-gggttgagtgtctttgta 113  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||||||   ||||||||| ||||||||||||||   | |||||||||||||||||     
T  28503585 tgttcttgtgc--ttttttgaaggagagcttggaagagcttagagagagagagaacttggataacaaaggagggaaccaaaagggttgagtgtctttgtt 28503682  T
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||    
T  28503683 gagagtgtctcttgggttgggaaaaatattgtaatcaccttgggt 28503727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 18656657 - 18656540
Alignment:
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggttt 213  Q
    ||||| || |||| |||||||||||||||||||||||||||||| || |||||| ||| |||||||||||||||| |||||||||||| |||||||||||    
T  18656657 gagagtgtttcttaggttgggaaaaacattgtaatcaccttgggattaagggtttatagtgtgagagtgggaaaataccaaagggtag-atctagggttt 18656559  T
Q  214 gttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||    
T  18656558 gttcatgtgtaaagcttga 18656540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 28501429 - 28501560
Alignment:
Q  31 ttttttgaaggagagtttggaagagcttagagagaga---aacttggattacaaaggagggaactcta-gggttgagtgtctttgtagagagggtctctt 126  Q
    ||||||||||||||| |||||||||||||||||||||   ||||||||| ||||||||||||||   | ||| ||||||||||||| ||||| |||||||    
T  28501429 ttttttgaaggagagcttggaagagcttagagagagagagaacttggataacaaaggagggaaccaaaagggatgagtgtctttgttgagagtgtctctt 28501528  T
Q  127 gggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||||||    
T  28501529 gggttgggaaaaacattgtaatcaccttgggt 28501560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 27986216 - 27986313
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  27986216 agagagagaaacttggattacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 27986313  T

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Target: chr3; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 26928359 - 26928456
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  26928359 agagagaaaaacttggattacaaacgagggaactctagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 26928456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 32143649 - 32143552
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||  |||||||||||| ||||||||||    
T  32143649 agagagagaaatttggattacaaaggagggaactctagggttgagtgtctttgtagtgatgatctcttgggttgg--aaaacattgtaaacaccttgggt 32143552  T

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Target: chr3; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 40592542 - 40592639
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  40592542 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 40592639  T

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Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 155
Target Start/End: Complemental strand, 21711548 - 21711454
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttg 155  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| |||||||    
T  21711548 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttg 21711454  T

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Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 28501613 - 28501698
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt 243  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||| || |||||||    
T  28501613 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttattcttgtgtaaagcttgaaggctagagtt 28501698  T

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Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 28503780 - 28503865
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt 243  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||| || |||||||    
T  28503780 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttattcttgtgtaaagcttgaaggctagagtt 28503865  T

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Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 1736064 - 1736161
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||| ||||||||||  ||||||||||| ||||||||||    
T  1736064 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggttggg--aaacattgtaaacaccttgggt 1736161  T

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Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 8370249 - 8370346
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| || |||||||    
T  8370249 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacatcttgggt 8370346  T

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Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 24694926 - 24695023
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  24694926 agagagagaaatttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 24695023  T

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Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 27974712 - 27974809
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| |||||||||| |||  ||||||||||| ||||||||||    
T  27974712 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggtcggg--aaacattgtaaacaccttgggt 27974809  T

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Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 33386435 - 33386532
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||||  || ||||||||||| ||||||||||    
T  33386435 agagagagaaacttggattacaaaggagagaactttagggttgagtgtctttgtagtgaggatctcttgggtt--gagaaacattgtaaacaccttgggt 33386532  T

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Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 6794473 - 6794572
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||| |||| ||||||| ||||||  ||||||||||| ||||||||    
T  6794473 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtcattgtagtgaggttctcttgagttggg--aaacattgtaaacaccttgg 6794570  T

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Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 26299316 - 26299217
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||| ||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||    
T  26299316 ttagagagagaaacttggattataaaggaggtaactttagggttgaatgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgg 26299219  T

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Target: chr3; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 2676946 - 2677065
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||||||||||||| ||||||  |||||||| |||||||||||| |||||||||    
T  2676946 gagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtag-atctagggt 2677044  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    ||  |||||||||||||||||    
T  2677045 tttgtcatgtgtaaagcttga 2677065  T

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Target: chr3; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 24968333 - 24968214
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||||||||||||| ||||||  |||||||  |||||||||||| |||| ||||    
T  24968333 gagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaagtaccaaagggtag-atctcgggt 24968235  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||||    
T  24968234 ttgttcatgtgtaaagcttga 24968214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 158
Target Start/End: Complemental strand, 16264671 - 16264578
Alignment:
Q  63 agagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||  |||| ||||||||||||||  ||||||||||| ||||||||||    
T  16264671 agagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtaatgaggatctcttgggttggg--aaacattgtaaacaccttgggt 16264578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 158
Target Start/End: Complemental strand, 36029415 - 36029322
Alignment:
Q  63 agagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||| || | ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  36029415 agagaaacttggattacaaaggaggtaaatttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 36029322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 47923664 - 47923761
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| |||| |||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  47923664 agagagagaaacttggattacaaaggaggtaactttaggattgagtgtctttgtagtgagaatctcttgggttggg--aaacattgtaaacaccttgggt 47923761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 3323449 - 3323548
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||| |||||| |||||||||||||| |||| ||||||||||||||||| ||| |||| ||||||||||||||  ||||||||||| ||||||||    
T  3323449 ttagagagacaaacttcgattacaaaggaggtaactttagggttgagtgtctttatagtgaggttctcttgggttggg--aaacattgtaaacaccttgg 3323546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 37726001 - 37725923
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaa 137  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| |||||||||| ||||||    
T  37726001 agagagagaaacttggattacaaaggaggaaactttagggttgagtgtctttgtagtgaggatctcttgggtggggaaa 37725923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 2672790 - 2672909
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| |||| |||||||| ||||||  |||||||| |||||||||||| |||||||||    
T  2672790 gagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttaaggttcatagtgtgaggatgggaaaataccaaagggtag-atctagggt 2672888  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    ||  |||||||||||||||||    
T  2672889 tttgtcatgtgtaaagcttga 2672909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 155
Target Start/End: Original strand, 4386733 - 4386831
Alignment:
Q  56 cttagagagagaaacttggat-tacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacctt 154  Q
    |||||||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||||||||    
T  4386733 cttagagagagaaacttgaaaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaatcacctt 4386830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 27453284 - 27453189
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||| |||| |||||||||||||   ||||||||||| ||||||||||    
T  27453284 agagagagaaacttggattacaaaggagggaactttagggttgagtgtc--tgtagtgaggatctcttgggttgg--caaacattgtaaacaccttgggt 27453189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 39032315 - 39032411
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || | |||||||||||||   ||||||||||| ||||||||||    
T  39032315 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtga-gatctcttgggttgg--taaacattgtaaacaccttgggt 39032411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 7167425 - 7167358
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  7167425 ttttagggttcatattgtgagagtggggaaataccaaagggtagaatctagggtttgttcttgtgtaa 7167358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 57 - 159
Target Start/End: Complemental strand, 37466623 - 37466523
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||||||||||||| |||| ||| | ||||||||||||||| |||| |||||| |||||||  ||||||||||| ||| ||||    
T  37466623 ttagagagagaaacttggattacaaaggaggtaactttagagctgagtgtctttgtagtgaggttctcttaggttggg--aaacattgtaaacactttgg 37466526  T
Q  157 gtt 159  Q
    |||    
T  37466525 gtt 37466523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 3328115 - 3328214
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    |||||||||||||||||||||| |||||||  |||| ||||||||| ||||||||||| |||  |||||||||||||  |||||||||||| ||||||||    
T  3328115 ttagagagagaaacttggattagaaaggagataactttagggttgaatgtctttgtagtgagcttctcttgggttgg--aaaacattgtaaacaccttgg 3328212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 155
Target Start/End: Complemental strand, 23410624 - 23410529
Alignment:
Q  59 agagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttg 155  Q
    |||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||| |||| |||||||||||||  |||||||||||| |||||||    
T  23410624 agagagagaaacttgggattgcaaaggagagaactttagggttgagtgtctttgtagtgaggttctcttgggttgg--aaaacattgtaaacaccttg 23410529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 48438539 - 48438445
Alignment:
Q  61 agagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||  ||| |||||| |||||||  ||||||||||| ||||||||||    
T  48438539 agagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtaaggatctctt-ggttggg--aaacattgtaaacaccttgggt 48438445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 1417249 - 1417329
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaa 137  Q
    ||||||||| ||||||| ||||||||||||| |||| ||||||||||||||||||||| |||| | |||||||||||||||    
T  1417249 ttagagagaaaaacttgaattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttatcttgggttgggaaa 1417329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 27027032 - 27026935
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||  |||| |||||||| | |||  ||||||||||| ||||||||||    
T  27027032 agagagaaaaacttggattacaaaggaggtaactttagggttgagtgtctttgtactgaggatctcttggataggg--aaacattgtaaacaccttgggt 27026935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 27038377 - 27038280
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||| ||||||||||||||||||||  |||| |||||||||||| |||||||| |||| |||||||||| |||  ||||||||||| ||||||||||    
T  27038377 agagagaaaaacttggattacaaaggagataactttagggttgagtgcctttgtagtgaggatctcttgggtaggg--aaacattgtaaacaccttgggt 27038280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 8126958 - 8126859
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||||||||| | | |||| ||  ||||||||||||||||| |||| | ||||||||||||  ||||||||||| ||||||||    
T  8126958 ttagagagagaaacttggattacaaagaaagtaactttacagttgagtgtctttgtagtgaggttttcttgggttggg--aaacattgtaaacaccttgg 8126861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 147
Target Start/End: Original strand, 25929159 - 25929242
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaa 147  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||||||||| |||| ||||||| |||||  ||||||||||||    
T  25929159 gagagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagttgg--aaaacattgtaa 25929242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 23392204 - 23392106
Alignment:
Q  59 agagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    |||||||||||||||| | | |||||||| ||| | ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| |||||||||    
T  23392204 agagagagaaacttgggactgcaaaggagagaaatttagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttggg 23392107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 155
Target Start/End: Complemental strand, 40844977 - 40844887
Alignment:
Q  63 agagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttg 155  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||| |||| ||| |||||||  || ||||||||||| |||||||    
T  40844977 agagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggtt--gagaaacattgtaaacaccttg 40844887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 35925803 - 35925707
Alignment:
Q  62 gagagaaacttggattacaaaggag--ggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||  | |||| ||||||||| ||||||||||| |||| ||| ||||||||||  ||||||||||| ||||||||||    
T  35925803 gagagaaacttggattacaaaggagatgtaactttagggttgaatgtctttgtagtgaggatcttttgggttggg--aaacattgtaaacaccttgggt 35925707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 3715752 - 3715859
Alignment:
Q  52 agagcttagagagagaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaat 148  Q
    ||||||| |||||||||||||| || ||||||||||| |||| ||||||||| ||||||||||| |||| ||||||  ||||||||  |||||||||||     
T  3715752 agagctttgagagagaaacttgagaatacaaaggaggtaactttagggttgaatgtctttgtagtgaggttctcttgagggttggg--aaacattgtaaa 3715849  T
Q  149 caccttgggt 158  Q
    ||||||||||    
T  3715850 caccttgggt 3715859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 26928507 - 26928574
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||| || ||||||||||||||  |||||| |||||||    
T  26928507 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa 26928574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 8512443 - 8512324
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||  ||||||||| ||||||  |||||||  ||||||||||||  ||||||||    
T  8512443 gagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtag-gtctagggt 8512345  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    ||  || ||||||||||||||    
T  8512344 tttgtcttgtgtaaagcttga 8512324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 8517323 - 8517204
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||  ||||||||| ||||||  |||||||  ||||||||||||  ||||||||    
T  8517323 gagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtag-gtctagggt 8517225  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    ||  || ||||||||||||||    
T  8517224 tttgtcttgtgtaaagcttga 8517204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 8477545 - 8477493
Alignment:
Q  158 ttttagggttcatattgtgagagt-gggaaaacaccaaagggtagaatctagg 209  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  8477545 ttttagggttcatattgtgagagtgggggaaacaccaaagggtagaatctagg 8477493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 25796113 - 25796009
Alignment:
Q  55 gcttagagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatcac 151  Q
    |||| ||||||||||||||| | ||||||||||| ||||  |||||||||||||||||||| |||| ||||||  ||||||||  ||||| ||||| |||    
T  25796113 gctttgagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggctctcttgagggttggg--aaacaatgtaaacac 25796016  T
Q  152 cttgggt 158  Q
    |||||||    
T  25796015 cttgggt 25796009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 2671502 - 2671569
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| ||||||  | ||||||||||||||| ||| || |||||||    
T  2671502 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttggtcttgtgtaa 2671569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 32143501 - 32143434
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||| ||||||||| |||||| || ||||||||||||||  |||||| |||||||    
T  32143501 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa 32143434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 40372712 - 40372779
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    |||||||||||||||| |||||||||| ||||||  | ||||||||||||||| |||||| |||||||    
T  40372712 ttttagggttcatattatgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa 40372779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 158
Target Start/End: Complemental strand, 47649898 - 47649799
Alignment:
Q  60 gagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatcaccttgg 156  Q
    |||| |||||||||| | ||||||||||  |||| ||||||||||||||||||||| |||| ||||||  ||||||||  ||||||||||| ||||||||    
T  47649898 gagatagaaacttgggaatacaaaggagataactttagggttgagtgtctttgtagtgaggttctcttgagggttggg--aaacattgtaaacaccttgg 47649801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 8738982 - 8739046
Alignment:
Q  161 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    |||||||||||||||||||||||| ||| ||  | ||||||||||||||| |||||| |||||||    
T  8738982 tagggttcatattgtgagagtggggaaatacatatgggtagaatctagggattgttcttgtgtaa 8739046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 9091220 - 9091284
Alignment:
Q  161 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    |||||||||||||||||||||||| ||| ||  | ||||||||||||||| |||||| |||||||    
T  9091220 tagggttcatattgtgagagtggggaaatacatatgggtagaatctagggattgttcttgtgtaa 9091284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 137
Target Start/End: Complemental strand, 21353898 - 21353811
Alignment:
Q  55 gcttagagagagaaactt-ggattacaaaggagggaactctagggtt--gagtgtctttgtagagagggtctctt--gggttgggaaa 137  Q
    |||||||||||||||| | ||| ||||||||||| |||| |||||||  |||||||||||||| |||| ||||||  |||||||||||    
T  21353898 gcttagagagagaaacctaggaatacaaaggaggtaactttagggttttgagtgtctttgtagtgaggttctcttgagggttgggaaa 21353811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 30709557 - 30709605
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtc 107  Q
    ||||| ||||||||||||||||||||||| |||| ||| ||||||||||    
T  30709557 agagacagaaacttggattacaaaggaggtaactttagagttgagtgtc 30709605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 1306128 - 1306061
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||| ||||||||| |||||| || |||||||| ||| |  |||||| |||||||    
T  1306128 ttttagggttcatattgagagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaa 1306061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 27453138 - 27453071
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||| ||||||||| |||||| || ||||||||  ||||  |||||| |||||||    
T  27453138 ttttagggttcatattgagagagtggggaaacacaaatgggtagaaaataggaattgttcttgtgtaa 27453071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 22835275 - 22835199
Alignment:
Q  79 caaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||| |||| |||||||||| |||||||   ||||  ||||||| |||||||||  |||||||||||||||||||    
T  22835275 caaaggaggtaactttagggttgagggtctttgattagagt-tctcttgtgttgggaaa--cattgtaatcaccttgggt 22835199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 39153634 - 39153558
Alignment:
Q  79 caaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||| |||| |||||||||| |||||||   ||||  |||||||||||||||||  |||||||| ||||||||||    
T  39153634 caaaggaggtaactttagggttgagggtctttgattagagt-tctcttgggttgggaaa--cattgtaaacaccttgggt 39153558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 53 - 246
Target Start/End: Original strand, 34863 - 35055
Alignment:
Q  53 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacc 152  Q
    |||||||||||||||| |||||||  |||||||||||||    ||||||||||||||||| ||||| |||||||||||| || |||||||||||||||||    
T  34863 gagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaacattgtaatcacc 34961  T
Q  153 ttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttctt 246  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||    
T  34962 ttgggttttagggttcatagtgtgagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagttctt 35055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 7e-64; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 68 - 242
Target Start/End: Complemental strand, 41398506 - 41398331
Alignment:
Q  68 aacttggattacaaaggagggaactcta-gggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggt 166  Q
    |||||||||  |||||||||||||   | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41398506 aacttggatagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggt 41398407  T
Q  167 tcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagt 242  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  41398406 tcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagt 41398331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 41390819 - 41390676
Alignment:
Q  99 ttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaaggg 198  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  41390819 ttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaaggg 41390720  T
Q  199 tagaatctagggtttgttcatgtgtaaagcttgagggttagagt 242  Q
    |||||||||||||||||||||||||||||||||| || ||||||    
T  41390719 tagaatctagggtttgttcatgtgtaaagcttgaaggctagagt 41390676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 41 - 158
Target Start/End: Original strand, 24202518 - 24202635
Alignment:
Q  41 gagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaac 140  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  24202518 gagagcttggaagagcttagagagagaaacttggattacaaaggagggaactttagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaac 24202617  T
Q  141 attgtaatcaccttgggt 158  Q
    ||||||||||||||||||    
T  24202618 attgtaatcaccttgggt 24202635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 19366035 - 19366174
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    ||||||||||||| |||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  19366035 tgttcttgtgcagattttgga-ggagagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtga 19366133  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    || ||||||||||||||||||| ||||||| ||||||||||    
T  19366134 ggatctcttgggttgggaaaaatattgtaaacaccttgggt 19366174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 19358571 - 19358709
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    ||||||||||||| |||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  19358571 tgttcttgtgcagattttgga-ggagagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtga 19358669  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    || ||| |||||||||| |||||||||||| ||||||||||    
T  19358670 ggatcttttgggttggg-aaaacattgtaaacaccttgggt 19358709  T

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Target: chr1; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 19361160 - 19361298
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    ||||||||||||| |||| || |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  19361160 tgttcttgtgcagattttgga-ggagagcttggaagagcttagagagagaaacttagattacaaaggagggaactctagggttgagtgtctttgtagtga 19361258  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    || |||||||||||||| |||||||||||| ||||||||||    
T  19361259 ggatctcttgggttggg-aaaacattgtaaacaccttgggt 19361298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 24787090 - 24787226
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||   |||||||||||||||||| ||||    
T  24787090 tgttcttgtgc--ttttttgaaggagagcttggaagagcttagagagagaa-cttggataacaaaggagggaaccaaagggttgagtgtctttgttgaga 24787186  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    | |||||||||||||||||||||||| |||||||||||||    
T  24787187 gtgtctcttgggttgggaaaaacattataatcaccttggg 24787226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 25439758 - 25439875
Alignment:
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggttt 213  Q
    ||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||  ||||||||||    
T  25439758 gagagagtttcttaggttgggaaaaacattgtaatcaccttgggatttagggttcatagtgtgagagtgggaaaataccaaagggtag-ctctagggttt 25439856  T
Q  214 gttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||    
T  25439857 gttcatgtgtaaagcttga 25439875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 25444951 - 25445068
Alignment:
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggttt 213  Q
    ||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||  ||||||||||    
T  25444951 gagagagtttcttaggttgggaaaaacattgtaatcaccttgggatttagggttcatagtgtgagagtgggaaaataccaaagggtag-ctctagggttt 25445049  T
Q  214 gttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||    
T  25445050 gttcatgtgtaaagcttga 25445068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 1054874 - 1054991
Alignment:
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggttt 213  Q
    ||||| || |||| |||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||  ||||||||||    
T  1054874 gagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtag-ttctagggttt 1054972  T
Q  214 gttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||    
T  1054973 gttcatgtgtaaagcttga 1054991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 39445722 - 39445605
Alignment:
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggttt 213  Q
    ||||| || |||| |||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||  ||||||||||    
T  39445722 gagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtag-ttctagggttt 39445624  T
Q  214 gttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||    
T  39445623 gttcatgtgtaaagcttga 39445605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 44023736 - 44023853
Alignment:
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggttt 213  Q
    ||||| || |||| |||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||  ||||||||||    
T  44023736 gagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtag-ttctagggttt 44023834  T
Q  214 gttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||    
T  44023835 gttcatgtgtaaagcttga 44023853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 47098594 - 47098693
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||    
T  47098594 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagcgaggttctcttgggttggg--aaacattgtaaacaccttgg 47098691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 47102608 - 47102707
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||    
T  47102608 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgg 47102705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 13604393 - 13604490
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  13604393 agagagagaaacttggattacaaaggagggaactttagggttgagtatctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 13604490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 29652137 - 29652042
Alignment:
Q  61 agagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||| ||||||||||  ||||||||||| ||||||||||    
T  29652137 agagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatcttttgggttggg--aaacattgtaaacaccttgggt 29652042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 37070093 - 37069998
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||    
T  37070093 agagagagaaacttggattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgg 37069998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 21536344 - 21536438
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| |||||| ||||||  |||||||||||| ||||||||||    
T  21536344 gagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttaggttgg--aaaacattgtaaacaccttgggt 21536438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 27104171 - 27104269
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||||||||||||| |||| || |||||||||||||||||| || ||||||||||||||||  ||||||| ||| ||||||||    
T  27104171 ttagagagagaaacttggattacaaaggaggtaactttaaggttgagtgtctttgtagtga-ggtctcttgggttggg--aaacattataagcaccttgg 27104267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 32889766 - 32889667
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||| |||| | | ||||||||||  ||||||||||| ||||||||    
T  32889766 ttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggtttttttgggttggg--aaacattgtaaacaccttgg 32889669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 3282030 - 3281936
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||| |||| |||| || |||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  3282030 gagagaaacttggattacaaatgaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 3281936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 13598726 - 13598629
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||| ||||||||||||||||| |||| || |||||||||||||||||| |||| |||||||||||||   ||||||||||| ||||||||||    
T  13598726 agagagagaaaattggattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttgg--caaacattgtaaacaccttgggt 13598629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 9476590 - 9476491
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||||||||||||| |||| | ||||||| ||||||||||| |||| |||||| |||||||  ||||||||||| || |||||    
T  9476590 ttagagagagaaacttggattacaaaggaggtaacttttgggttgaatgtctttgtagtgaggttctctttggttggg--aaacattgtaaacatcttgg 9476493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 24787280 - 24787354
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  24787280 ttttagggttcatattgtgagagttgggaaacaccaaagggtagaatctaggatttgttcttgtgtaatgcttga 24787354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 155
Target Start/End: Original strand, 26644669 - 26644763
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttg 155  Q
    ||||||||||||||||||||||||||||  || | ||||||||||||||||||||| || | ||| ||||||||||  ||||||||||| |||||||    
T  26644669 agagagagaaacttggattacaaaggagataattttagggttgagtgtctttgtagtgaagatcttttgggttggg--aaacattgtaaacaccttg 26644763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 47703699 - 47703803
Alignment:
Q  55 gcttagagagagaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatcac 151  Q
    |||| |||||||||||||| || ||||||||||| |||| ||||||||||||||||||||| |||| ||||||  ||||||||  ||||||||||| |||    
T  47703699 gctttgagagagaaacttgagaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttggg--aaacattgtaaacac 47703796  T
Q  152 cttgggt 158  Q
    |||||||    
T  47703797 cttgggt 47703803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 22819756 - 22819660
Alignment:
Q  61 agagagaaacttggatt-acaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||| || |||||||||| |||| |||| || ||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  22819756 agagagaaacttgggtttacaaaggaggtaactttaggatttagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 22819660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 40816580 - 40816684
Alignment:
Q  55 gcttagagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatcac 151  Q
    |||| ||||||||||||||| | ||||||||||| ||||  |||||||||||||||||||| |||| ||||||  ||||||||  ||||||||||| |||    
T  40816580 gctttgagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttggg--aaacattgtaaacac 40816677  T
Q  152 cttgggt 158  Q
    |||||||    
T  40816678 cttgggt 40816684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 24202686 - 24202753
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||| || ||||||||||||||  |||||| |||||||    
T  24202686 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa 24202753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 19073256 - 19073159
Alignment:
Q  60 gagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||| | ||||||||||| ||||  |||||||||||||||||||| |||| ||||||  ||||||||  ||||||||||| ||||||||    
T  19073256 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttggg--aaacattgtaaacaccttgg 19073159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 19121146 - 19121049
Alignment:
Q  60 gagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||| | ||||||||||| ||||  |||||||||||||||||||| |||| ||||||  ||||||||  ||||||||||| ||||||||    
T  19121146 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttggg--aaacattgtaaacaccttgg 19121049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 43988321 - 43988442
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||  ||||||||| ||||||  ||||||||  ||||||||||| |||||||||    
T  43988321 gagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggatgggaaaatgccaaagggtag-atctagggt 43988419  T
Q  212 ttgt--tcatgtgtaaagcttga 232  Q
    || |  || ||||||||||||||    
T  43988420 tttttgtcttgtgtaaagcttga 43988442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 19358760 - 19358827
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||| ||||||||| |||||| || ||||||||||||||  |||||| |||||||    
T  19358760 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa 19358827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 19361349 - 19361416
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||| ||||||||| |||||| || ||||||||||||||  |||||| |||||||    
T  19361349 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa 19361416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 19366225 - 19366292
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||| ||||||||| |||||| || ||||||||||||||  |||||| |||||||    
T  19366225 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa 19366292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 19379989 - 19380056
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||| ||||||||| |||||| || ||||||||||||||  |||||| |||||||    
T  19379989 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa 19380056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 137
Target Start/End: Original strand, 17345327 - 17345410
Alignment:
Q  55 gcttagagagagaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaa 137  Q
    |||||||||| ||||| || || ||||||||||| |  | ||||||||||||||||||||| |||| ||||||| |||| ||||    
T  17345327 gcttagagagggaaacatgagaatacaaaggaggtacatttagggttgagtgtctttgtagtgaggttctcttgagttgagaaa 17345410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 9022677 - 9022770
Alignment:
Q  59 agagagagaaacttggatt-acaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacctt 154  Q
    |||||||||||||||| || |||||||||| | || | || |||| ||||||||||| |||| |||||||||||  || ||||||||||| ||||||    
T  9022677 agagagagaaacttgggtttacaaaggaggtatcttttgg-ttgaatgtctttgtagtgaggttctcttgggtt--gagaaacattgtaaacacctt 9022770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 197181 - 197105
Alignment:
Q  79 caaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||| |||| |||||||||| |||||||   ||||  |||||||||||||||||  |||||||| ||||||||||    
T  197181 caaaggaggtaactttagggttgagggtctttgattagagt-tctcttgggttgggaaa--cattgtaaacaccttgggt 197105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 121; Significance: 4e-62; HSPs: 4)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 17679 - 17818
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17679 tgttcttgtgcagatttt-gaaggagagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 17777  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  17778 ggatctcttgggttgggaaaaacattgtaatcaccttgggt 17818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 23786 - 23911
Alignment:
Q  33 ttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttg 132  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23786 ttttgaaggagagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttg 23885  T
Q  133 ggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||    
T  23886 ggaaaaacattgtaatcaccttgggt 23911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 17869 - 17936
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||| || |||||||| ||| |  |||||| |||||||    
T  17869 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaa 17936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 23962 - 24029
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||| || |||||||| ||| |  |||||| |||||||    
T  23962 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaa 24029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 4e-59; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 68 - 242
Target Start/End: Original strand, 39811803 - 39811978
Alignment:
Q  68 aacttggattacaaaggagggaactcta-gggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggt 166  Q
    |||||||||  |||||||||||||   | ||||||||||||||||| ||||| ||||||| ||||| |||||||||||||||||||||||||||||||||    
T  39811803 aacttggatagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttaggttgagaaaaacattgtaatcaccttgggttttagggt 39811902  T
Q  167 tcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagt 242  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  39811903 tcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagt 39811978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 25409999 - 25409860
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    ||||||||||||| |||| |||| |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  25409999 tgttcttgtgcagatttt-gaagtagagcttggaagagcttagagagagaaacttggattacagaggagggaacactagggttgagtgtctttgtagaga 25409901  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    || ||||||||||||||||||||||||||| ||||||||||    
T  25409900 ggatctcttgggttgggaaaaacattgtaaacaccttgggt 25409860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 11098652 - 11098790
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    ||||||||||||| ||| |  || |||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  11098652 tgttcttgtgcagatttgt--agaagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagaga 11098749  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  11098750 gtgtctcttgggttgggaaaaacattgtaatcaccttgggt 11098790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 9296127 - 9296265
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    |||||||||||  ||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||| |    
T  9296127 tgttcttgtgc--ttttttggaggagagcttggaagagcttagagagaaaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagaaa 9296224  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    | |||| ||||||||||||||||||||||||||||||||||    
T  9296225 gtgtctattgggttgggaaaaacattgtaatcaccttgggt 9296265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 14291860 - 14291722
Alignment:
Q  18 tgttcttgtgcagttttttgaaggagagtttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagaga 117  Q
    ||||||||||||| |||| ||  ||||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||| |    
T  14291860 tgttcttgtgcagattttaga--gagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagcgtctttgtagata 14291763  T
Q  118 gggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  14291762 gtgtctcttgggttgggaaaaacattgtaatcaccttgggt 14291722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 32247011 - 32246893
Alignment:
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggttt 213  Q
    ||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  32247011 gagagtgtttcttaggttgggaaaaacattgtaatcaccttgggatttagggttcatagtgtgagagtgggaaaataccaaagggtataatctagggttt 32246912  T
Q  214 gttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||    
T  32246911 gttcatgtgtaaagcttga 32246893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 3492085 - 3491981
Alignment:
Q  54 agcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacct 153  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||| |||||    
T  3492085 agcttagagagagaaacttggattacaaaggagggaaatctagggttgagtgtctttgtagtgaggatctcttgggttggaaaaaacattgtaaacacct 3491986  T
Q  154 tgggt 158  Q
    |||||    
T  3491985 tgggt 3491981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 40739158 - 40739063
Alignment:
Q  61 agagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  40739158 agagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 40739063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 14698778 - 14698877
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||| ||||||||  ||||||||||| ||||||||    
T  14698778 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctctcgggttggg--aaacattgtaaacaccttgg 14698875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 33118463 - 33118364
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||   |||||||||| ||||||||    
T  33118463 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--gaacattgtaaacaccttgg 33118366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 33528395 - 33528492
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||| ||||||    
T  33528395 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacacattgggt 33528492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 21630268 - 21630174
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  21630268 gagagaaacttggattacaaaggaggtaactttagtgttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 21630174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 34389174 - 34389080
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  34389174 gagagaaacttggattacaaaggaggtaactttagggttgtgtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 34389080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 36757536 - 36757630
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||| ||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  36757536 gagagaaacttgaattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 36757630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 28258948 - 28259045
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||| |||| ||||||||||||||  ||||||||||| || |||||||    
T  28258948 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttatagtgaggatctcttgggttggg--aaacattgtaaacatcttgggt 28259045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 11098843 - 11098910
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  11098843 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa 11098910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 19344648 - 19344528
Alignment:
Q  114 gagagggtctcttgggttgggaaaaaca---ttgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctaggg 210  Q
    ||||| || |||| ||||||||||||||   |||||||||||||||| ||  ||||||||| |||||| ||||||||| ||||||||||||  |||||||    
T  19344648 gagagtgtttcttaggttgggaaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtag-gtctaggg 19344550  T
Q  211 tttgttcatgtgtaaagcttga 232  Q
    ||||||||||||||||||||||    
T  19344549 tttgttcatgtgtaaagcttga 19344528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 19349506 - 19349386
Alignment:
Q  114 gagagggtctcttgggttgggaaaaaca---ttgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctaggg 210  Q
    ||||| || |||| ||||||||||||||   |||||||||||||||| ||  ||||||||| |||||| ||||||||| ||||||||||||  |||||||    
T  19349506 gagagtgtttcttaggttgggaaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtag-gtctaggg 19349408  T
Q  211 tttgttcatgtgtaaagcttga 232  Q
    ||||||||||||||||||||||    
T  19349407 tttgttcatgtgtaaagcttga 19349386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 10445236 - 10445335
Alignment:
Q  57 ttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    |||||||||||||||| |||||||||||||| |||| ||||||||| ||||||||||| |||| ||||| ||||||||  ||||||||||| ||||||||    
T  10445236 ttagagagagaaacttagattacaaaggaggtaactttagggttgaatgtctttgtagtgaggttctctcgggttggg--aaacattgtaaacaccttgg 10445333  T

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Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 158
Target Start/End: Complemental strand, 17865522 - 17865434
Alignment:
Q  68 aacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||| || | ||||||||||||||  ||||||||||| ||||||||||    
T  17865522 aacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaagatctcttgggttggg--aaacattgtaaacaccttgggt 17865434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 20522548 - 20522471
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaa 136  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| |||  ||||||||||||||||    
T  20522548 agagagagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgagtatctcttgggttgggaa 20522471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 8389920 - 8390015
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||||||||||||||||||||  |||| |||||||||| |||||||||| || | ||||||||||| ||  ||||||||||| ||||||||    
T  8389920 agagagagaaacttggattacaaaggagataactttagggttgagggtctttgtagtgatgatctcttgggttagg--aaacattgtaaacaccttgg 8390015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 13569655 - 13569577
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaa 137  Q
    |||||||||||||||||||||||| |||  |||| ||||||| ||||||||||||| |||| |||||||||||||||||    
T  13569655 agagagagaaacttggattacaaatgagataactttagggttaagtgtctttgtagtgaggatctcttgggttgggaaa 13569577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 23078245 - 23078339
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||| |||| | |||||||||||||||||   |||  ||||||||||||||  ||||||||||| ||||||||||    
T  23078245 gagagaaacttggattacaaaggaggtaacttttgggttgagtgtctttgtgatgagaatctcttgggttggg--aaacattgtaaacaccttgggt 23078339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 10707023 - 10707120
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||| |||||||||||||| |||| ||||||| | | ||||||||| |||| |||||||||||  || ||||||||||| ||||||||||    
T  10707023 agagagagaaacttagattacaaaggaggtaactttagggtttattatctttgtagtgaggatctcttgggtt--gagaaacattgtaaacaccttgggt 10707120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 44312563 - 44312619
Alignment:
Q  192 caaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgt 248  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  44312563 caaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgt 44312619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 31056376 - 31056272
Alignment:
Q  55 gcttagagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatcac 151  Q
    |||| ||||||||||||||| | ||||||||||| ||||  |||||||||||||||||||| |||| ||||||  ||||||||  ||||||||||| |||    
T  31056376 gctttgagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttggg--aaacattgtaaacac 31056279  T
Q  152 cttgggt 158  Q
    |||||||    
T  31056278 cttgggt 31056272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 34682097 - 34682201
Alignment:
Q  55 gcttagagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacct 153  Q
    |||| ||||||||||||||| | ||||||||||| |||| ||||||||||||||||||||| |||| ||||||| |    | |||||||||||| |||||    
T  34682097 gctttgagagagaaacttgggaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagagttggaaaacattgtaaacacct 34682196  T
Q  154 tgggt 158  Q
    |||||    
T  34682197 tgggt 34682201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 3491930 - 3491863
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||| || ||||||||||||||  |||||| |||||||    
T  3491930 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa 3491863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 14291669 - 14291602
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| ||||||  | ||||||||||||||| |||||| |||||||    
T  14291669 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa 14291602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 8040397 - 8040293
Alignment:
Q  55 gcttagagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatcac 151  Q
    |||| ||||||||||||||| | ||||||||||| |||| || |||||||||||||||||| || | ||||||  ||||||||  ||||||||||| |||    
T  8040397 gctttgagagagaaacttggtaatacaaaggaggtaactttatggttgagtgtctttgtagtgaagttctcttgagggttggg--aaacattgtaaacac 8040300  T
Q  152 cttgggt 158  Q
    |||||||    
T  8040299 cttgggt 8040293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 2837816 - 2837895
Alignment:
Q  77 tacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatcaccttgg 156  Q
    ||||||||||| |||| ||||||||||||||||||||| |||| ||||||  ||||||||  ||||||||||| ||||||||    
T  2837816 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttggg--aaacattgtaaacaccttgg 2837895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 9296317 - 9296376
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttc 217  Q
    ||||||||||||||||||||||||||| ||||||  | ||||||||||||||| ||||||    
T  9296317 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttc 9296376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 137
Target Start/End: Complemental strand, 42269702 - 42269617
Alignment:
Q  55 gcttagagagagaaacttgg-attacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaa 137  Q
    |||| ||||||||||||||| | ||||||||||| |||| || |||||||||||||||||| |||| ||||||  |||||||||||    
T  42269702 gctttgagagagaaacttgggaatacaaaggaggtaactttaaggttgagtgtctttgtagtgaggttctcttgagggttgggaaa 42269617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 35397839 - 35397738
Alignment:
Q  57 ttagagagagaaacttggat--tacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcacctt 154  Q
    ||||||||||||||||| |   |||||||||||  ||| ||||||||| ||||||||||| |||| |||  ||||||||  ||||||||||||| |||||    
T  35397839 ttagagagagaaacttgaaaaatacaaaggaggtcactttagggttgattgtctttgtagtgaggttcttctgggttgg--aaaacattgtaattacctt 35397742  T
Q  155 gggt 158  Q
    ||||    
T  35397741 gggt 35397738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 25398675 - 25398608
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||  |||||| || |||||||| |||||  |||||| |||||||    
T  25398675 ttttagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtgtaa 25398608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 25403813 - 25403746
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||  |||||| || |||||||| |||||  |||||| |||||||    
T  25403813 ttttagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtgtaa 25403746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 25407802 - 25407735
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||  |||||| || |||||||| |||||  |||||| |||||||    
T  25407802 ttttagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtgtaa 25407735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 40015251 - 40015173
Alignment:
Q  59 agagagagaaactt-ggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaa 137  Q
    ||||||||||| || || |||||||||||| |||| ||||||||||||| ||||||  |||| |||||||||||||||||    
T  40015251 agagagagaaatttaggtttacaaaggaggtaactttagggttgagtgt-tttgtattgaggttctcttgggttgggaaa 40015173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 40739012 - 40738945
Alignment:
Q  158 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 225  Q
    ||||||||||||||||||||||||||| |||||| || |||||||| ||| |  |||||| |||||||    
T  40739012 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaagacttgttcttgtgtaa 40738945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 2869481 - 2869560
Alignment:
Q  77 tacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||  |||| || |||||||||||||||||| |||| ||||||| |||||  |||||||||||| ||| ||||||    
T  2869481 tacaaaggagataactttacggttgagtgtctttgtagtgaggttctcttgagttgg--aaaacattgtaaacacattgggt 2869560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 39483229 - 39483162
Alignment:
Q  89 aactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||| ||||||||||||||||||| | |||| ||||||||||||||  ||| ||||||| ||||||||||    
T  39483229 aactttagggttgagtgtctttgttgtgaggatctcttgggttggg--aaatattgtaaacaccttgggt 39483162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 1344333 - 1344394
Alignment:
Q  77 tacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttg-ggttgggaaa 137  Q
    |||||| |||| || | ||||||||||||||||||||| |||| ||||||| ||||||||||    
T  1344333 tacaaatgaggtaattttagggttgagtgtctttgtagtgaggttctcttgaggttgggaaa 1344394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 39284759 - 39284856
Alignment:
Q  59 agagagagaaacttggatta-caaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    ||||||||||||||||   | ||||||||| |||| |||||||||| |||||||   ||||  |||||||||||||||||  |||||||| |||||||||    
T  39284759 agagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagt-tctcttgggttgggaaa--cattgtaaacaccttggg 39284855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 11151864 - 11151788
Alignment:
Q  79 caaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||| |||| |||||||||| |||||||   ||||  |||||||||||||||||  |||||||| ||||||||||    
T  11151864 caaaggaggtaactttagggttgagggtctttgattagagt-tctcttgggttgggaaa--cattgtaaacaccttgggt 11151788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 42362247 - 42362323
Alignment:
Q  79 caaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||| |||| |||||||||| |||||||   ||||  |||||||||||||||||  |||||||| ||||||||||    
T  42362247 caaaggaggtaactttagggttgagggtctttgattagagt-tctcttgggttgggaaa--cattgtaaacaccttgggt 42362323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 68 - 242
Target Start/End: Original strand, 3663 - 3837
Alignment:
Q  68 aacttggattacaaaggagggaactcta-gggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggt 166  Q
    |||||||||  |||||||||||||   | ||||||||||||||||| ||||| ||||||| |||| ||||||||||||||||||||||||||||||||||    
T  3663 aacttggatagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttaggttaggaaaaacattgtaatcaccttgggttttagggt 3762  T
Q  167 tcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagt 242  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| || ||||||    
T  3763 tcatagtgtgagagtgggaaaataccaaagggtag-atctagggtttgttcatgtgtaaagcttgaaggctagagt 3837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 123 - 242
Target Start/End: Original strand, 9514 - 9632
Alignment:
Q  123 tcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtg 222  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  9514 tcttaggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtag-atctagggtttgttcatgtg 9612  T
Q  223 taaagcttgagggttagagt 242  Q
    |||||||||| || ||||||    
T  9613 taaagcttgaaggctagagt 9632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 585 - 468
Alignment:
Q  114 gagagggtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggttt 213  Q
    ||||| || |||| |||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||  ||||||||||    
T  585 gagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtag-ttctagggttt 487  T
Q  214 gttcatgtgtaaagcttga 232  Q
    |||||||||||||||||||    
T  486 gttcatgtgtaaagcttga 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 8188 - 8285
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  8188 agagagagaaacttggattacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 8285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 36603 - 36700
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| |||||||||||||  |||||||||||| ||||||||||    
T  36603 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--aaaacattgtaaacaccttgggt 36700  T

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Target: scaffold0087; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 43732 - 43829
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||| ||||||||||  ||||||||||| ||||||||||    
T  43732 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatcttttgggttggg--aaacattgtaaacaccttgggt 43829  T

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Target: scaffold0006 (Bit Score: 69; Significance: 4e-31; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 133050 - 133147
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||    
T  133050 agagagagaaacttggattacaaaggagggaactttagggttgagtttctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 133147  T

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Target: scaffold0006; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 6011 - 5914
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    ||||||||||| ||||||||||||||||| |||| || |||||||||||||||||| |||| |||||||||||||   ||||||||||| ||||||||||    
T  6011 agagagagaaaattggattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttgg--caaacattgtaaacaccttgggt 5914  T

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Target: scaffold0006; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 155
Target Start/End: Complemental strand, 2819 - 2726
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttg 155  Q
    ||||||||||| ||||||||||||  ||| |||| ||||||| ||| ||||||||| |||| ||||||||||||||  ||||||||||| |||||||    
T  2819 agagagagaaa-ttggattacaaaaaaggtaactttagggttaagtttctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttg 2726  T

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Target: scaffold0036 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 86006 - 85912
Alignment:
Q  62 gagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||| ||| ||||||    
T  86006 gagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacactttgggt 85912  T

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Target: scaffold0098 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 45525 - 45427
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtc-tttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| |||| ||||||| |||| |||||||||||| |  ||||||||||| |||||||||    
T  45525 agagagagaaacttggattacaaaggaggtaactttagggttgaatgtcttttgtagtgaggatctcttgggttgtg--aaacattgtaaacaccttggg 45428  T

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Target: scaffold0176 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 17577 - 17480
Alignment:
Q  59 agagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 158  Q
    |||||||||| ||||||||||| |||||| |||| || |||||||||||||||||| |  | |||||||| |||||  ||||||||||| ||||||||||    
T  17577 agagagagaaccttggattacataggaggtaactttacggttgagtgtctttgtagtggagatctcttggattggg--aaacattgtaaacaccttgggt 17480  T

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Target: scaffold0148 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 11064 - 10960
Alignment:
Q  55 gcttagagagagaaactt-ggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt--gggttgggaaaaacattgtaatcac 151  Q
    |||| ||||||||||||| ||| ||||||||||| |||| || |||||||||||||||||| |||| ||||||  ||||||||  ||||||||||| |||    
T  11064 gctttgagagagaaactttggaatacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctcttgagggttggg--aaacattgtaaacac 10967  T
Q  152 cttgggt 158  Q
    |||||||    
T  10966 cttgggt 10960  T

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Target: scaffold0259 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 2110 - 2229
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||  ||||||||| ||||||  |||||||  |||||||||||| ||||| |||    
T  2110 gagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtag-atctatggt 2208  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    ||  || ||||||||||||||    
T  2209 tttgtcttgtgtaaagcttga 2229  T

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Target: scaffold0197 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 14168 - 14287
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||  ||||||||| ||||||  |||||||  ||||||||||||  ||||||||    
T  14168 gagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtag-gtctagggt 14266  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    ||  || ||||||||||||||    
T  14267 tttgtcttgtgtaaagcttga 14287  T

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Target: scaffold0197; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 19024 - 19143
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||  ||  ||||||||| ||||||  |||||||  |||||||||||| |||||||||    
T  19024 gagagtgtttcttaggttgggaaaacaacattgtaatcaccttggaattatgggttcatagtgtgaggttgggaaattaccaaagggtag-atctagggt 19122  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    ||  || ||||||||||||||    
T  19123 tttgtcttgtgtaaagcttga 19143  T

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Target: scaffold0078 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 23859 - 23761
Alignment:
Q  59 agagagagaaacttg-gattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 157  Q
    ||||||||||||||| |||||||| ||||| |||| || ||||||| |||||| ||| |||| ||| ||||||||| |||||  ||||||||||||||||    
T  23859 agagagagaaacttgagattacaatggaggtaactttaaggttgagcgtctttatagtgaggttctattgggttggaaaaaa--ttgtaatcaccttggg 23762  T

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Target: scaffold0028 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 148815 - 148934
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggt 211  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||  ||||||||| ||||||  |||||||  |||||||||||| ||||| |||    
T  148815 gagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtag-atctatggt 148913  T
Q  212 ttgttcatgtgtaaagcttga 232  Q
    ||  || ||||||||||||||    
T  148914 tttgtcttgtgtaaagcttga 148934  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 176836 - 176925
Alignment:
Q  114 gagagggtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtgggaaaacaccaaagggtag 201  Q
    ||||| || |||| |||||||||||  ||||||||||||||||||| ||  ||||||||| ||||||  |||||||  ||||||||||||    
T  176836 gagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtag 176925  T

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Target: scaffold0477 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 5728 - 5794
Alignment:
Q  61 agagagaaactt-ggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctctt 126  Q
    |||||||||| | ||| ||||||||||| ||||  |||||||||||||||||||| |||| ||||||    
T  5728 agagagaaacctaggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctctt 5794  T

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