View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14484_low_77 (Length: 232)
Name: NF14484_low_77
Description: NF14484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14484_low_77 |
 |  |
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| [»] chr1 (1 HSPs) |
 |  |
|
| [»] chr3 (22 HSPs) |
 |  |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 30 - 232
Target Start/End: Original strand, 35140364 - 35140566
Alignment:
| Q |
30 |
ttatctttagctctgaaaacactggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattggagactgatttgcggcgtttaccca |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35140364 |
ttatctttagctctgaaaacactggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattggagactgatttgcggcgtttaccca |
35140463 |
T |
 |
| Q |
130 |
agggtgacagcagcaacaattattccgttctgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35140464 |
agggtgacagcagcaacaattattccgttctgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaa |
35140563 |
T |
 |
| Q |
230 |
ggg |
232 |
Q |
| |
|
||| |
|
|
| T |
35140564 |
ggg |
35140566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 22)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 38 - 232
Target Start/End: Complemental strand, 6259225 - 6259031
Alignment:
| Q |
38 |
agctctgaaaacactggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattggagactgatttgcggcgtttacccaagggtgac |
137 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
6259225 |
agctctgaaaacattggggattctcttgcaaagaaagttctctgaaaatgaatgggttaagatattggagactgatttgtggcgtttacccaagggtgac |
6259126 |
T |
 |
| Q |
138 |
agcagcaacaattattccgttctgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaaggg |
232 |
Q |
| |
|
| |||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
6259125 |
aacagcaacatttattccgctttgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcttattgttctatatttcccaaggg |
6259031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 34 - 232
Target Start/End: Complemental strand, 6245317 - 6245122
Alignment:
| Q |
34 |
ctttagctctgaaaacactggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattggagactgatttgcggcgtttacccaaggg |
133 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||| |||||||||| || | |
|
|
| T |
6245317 |
ctttagctctgaaaacattggggattctcttgcaaagaagattctctgaaaatgaatgggttaagatattagagactgatttgtggcgtttacctgagag |
6245218 |
T |
 |
| Q |
134 |
tgacagcagcaacaattattccgttctgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaaggg |
232 |
Q |
| |
|
||| |||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
6245217 |
tga---cagcaacatttattccgttctaagaatgagttaccttaacctcccttccaatctgaagcattgttttgcttattgttctatatttcccaaggg |
6245122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 34 - 232
Target Start/End: Original strand, 13270555 - 13270753
Alignment:
| Q |
34 |
ctttagctctgaaaacactggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattggagactgatttgcggcgtttacccaaggg |
133 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||| ||| ||| || | || |
|
|
| T |
13270555 |
ctttagctctgaaaacattggggattctcttgcaaagaaaattctctgaaattaaatgggttaagatattggagactgatttgtggcatttctccgaagg |
13270654 |
T |
 |
| Q |
134 |
tgacagcagcaacaattattccgttctgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaaggg |
232 |
Q |
| |
|
|||||||| || || || |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
13270655 |
tgacagcaacagcattttttccattctgagaatgagttaccttagcctaccttccaatctgaagcattgttttgcatattgttctatatttcccaaggg |
13270753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 36 - 232
Target Start/End: Complemental strand, 6142314 - 6142121
Alignment:
| Q |
36 |
ttagctctgaaaacactggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattggagactgatttgcggcgtttacccaagggtg |
135 |
Q |
| |
|
||||||||||||||| |||||||||||||| | ||||||||||| |||| ||||||||||| ||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
6142314 |
ttagctctgaaaacattggggattctcttgaatagaaaattctctgaaattgaatgggttaggatattggagactgatttgtggcgtttaccagagggtg |
6142215 |
T |
 |
| Q |
136 |
acagcagcaacaattattccgttctgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaaggg |
232 |
Q |
| |
|
| | | |||| | |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
6142214 |
a---cggaaacattaattccgttctgagaatcagttaccttagcctcccttctgatctgaagcattgttttgcttattgttctatatttcccaaggg |
6142121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 34 - 232
Target Start/End: Complemental strand, 6168921 - 6168726
Alignment:
| Q |
34 |
ctttagctctgaaaacactggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattggagactgatttgcggcgtttacccaaggg |
133 |
Q |
| |
|
|||| ||||| |||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||| || ||||||| ||| | |
|
|
| T |
6168921 |
cttttgctctaaaaacattggggattctcttgcaaagaagattctctgaaaatgaatgggttaagatattagagactgatttgtggagtttacctaagag |
6168822 |
T |
 |
| Q |
134 |
tgacagcagcaacaattattccgttctgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaaggg |
232 |
Q |
| |
|
|||||| || || ||||||| |||| ||| ||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
6168821 |
tgacagaag---catttattcctttctaagacagagttaccttaacctcccttcaaatctgaagcattgttttgcatattgttctatatttcccaaggg |
6168726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 34 - 208
Target Start/End: Complemental strand, 6265721 - 6265550
Alignment:
| Q |
34 |
ctttagctctgaaaacactggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattggagactgatttgcggcgtttacccaaggg |
133 |
Q |
| |
|
||||| ||||||||||| ||||||||||||| |||||||||||||| | || |||||||||| |||||||||||||||||||| || |||||||| |||| |
|
|
| T |
6265721 |
ctttaactctgaaaacattggggattctcttccaaagaaaattctctgtaactgaatgggttgagatattggagactgatttgtggtgtttacccgaggg |
6265622 |
T |
 |
| Q |
134 |
tgacagcagcaacaattattccgttctgagaatgagttaccttagcctcccttccaatctgaagcattgttttgc |
208 |
Q |
| |
|
||||| | ||| |||| | | |||||| ||| |||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
6265621 |
tgacaactgcattaatttt---gctctgaggatgcattaccttagcctccctcccaatctgaagcgttgttttgc |
6265550 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 34 - 232
Target Start/End: Complemental strand, 6882534 - 6882339
Alignment:
| Q |
34 |
ctttagctctgaaaacactggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattggagactgatttgcggcgtttacccaaggg |
133 |
Q |
| |
|
||||||| ||||||||| |||||| |||||||| || ||||||||| ||| ||||||| ||||| ||||||||||||||||| ||||||||||| |||| |
|
|
| T |
6882534 |
ctttagcactgaaaacattggggaatctcttgctaaaaaaattctctgaatctgaatggattaaggtattggagactgatttgtggcgtttacccgaggg |
6882435 |
T |
 |
| Q |
134 |
tgacagcagcaacaattattccgttctgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaaggg |
232 |
Q |
| |
|
||| | | ||| | | | | |||||| |||||||||||| |||||||||||||||||||| ||||||||| |||| |||||||||||||||||| |
|
|
| T |
6882434 |
tga---aatctacattaacttgttactgagattgagttaccttatcctcccttccaatctgaagcgttgttttgcttattgttctatatttcccaaggg |
6882339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 232
Target Start/End: Complemental strand, 6900118 - 6899923
Alignment:
| Q |
34 |
ctttagctctgaaaacactggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattggagactgatttgcggcgtttacccaaggg |
133 |
Q |
| |
|
||||||||||||||||| |||||| ||||||| ||||||| ||||| ||| ||| ||||||||||| |||||||||||||| |||||||||| |||| |
|
|
| T |
6900118 |
ctttagctctgaaaacattggggaatctcttggaaagaaagttctctgaacctgattgggttaagatgttggagactgatttctggcgtttaccagaggg |
6900019 |
T |
 |
| Q |
134 |
tgacagcagcaacaattattccgtt-ctgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaaggg |
232 |
Q |
| |
|
| | | || | |||| || || ||| | |||||||||||| ||||||||||||||||||||||||||||| |||| |||| ||||||| ||||| |
|
|
| T |
6900018 |
taataacaac----attaaccctttattgaaattgagttaccttaacctcccttccaatctgaagcattgttttgattattgttctttatttccaaaggg |
6899923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 34 - 232
Target Start/End: Original strand, 6591355 - 6591547
Alignment:
| Q |
34 |
ctttagctctgaaaacactggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattggagactgatttgcggcgtttacccaaggg |
133 |
Q |
| |
|
|||||||||| |||||| ||||| || ||||||| ||||||||| | || |||||| | |||||||||||||||||| || ||| |||| | | || |
|
|
| T |
6591355 |
ctttagctctaaaaacaatggggcaacttttgcaaaaaaaattctctgtaaccgaatggatgaagatattggagactgatatgtggcatttatcagatgg |
6591454 |
T |
 |
| Q |
134 |
tgacagcagcaacaattattccgttctgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaaggg |
232 |
Q |
| |
|
|||||||| ||| |||| |||||| |||||||||||| |||||| ||||||||||||| ||||||||| |||| |||||||||||||||||| |
|
|
| T |
6591455 |
tgacagcattaacc------ccgtactgagattgagttaccttaacctcccatccaatctgaagcgttgttttgcttattgttctatatttcccaaggg |
6591547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 7749910 - 7749837
Alignment:
| Q |
159 |
ctgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaaggg |
232 |
Q |
| |
|
|||||| ||| |||||||| |||||||||||||||||||| ||||||||| |||| |||||||||||| ||||| |
|
|
| T |
7749910 |
ctgagattgaattaccttaacctcccttccaatctgaagcgttgttttgcttattgttctatatttccaaaggg |
7749837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 34 - 229
Target Start/End: Complemental strand, 5268061 - 5267869
Alignment:
| Q |
34 |
ctttagctctgaaaacactggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattggagactgatttgcggcgtttacccaaggg |
133 |
Q |
| |
|
|||||||| | ||||| |||| | |||||||| |||||||||||| || ||||||||||||||||||||||||| ||| || |||||||| | | || |
|
|
| T |
5268061 |
ctttagctgtaaaaactttgggaaatctcttgcgaagaaaattctctcaacatgaatgggttaagatattggagacagatatgtggcgtttatcagaagg |
5267962 |
T |
 |
| Q |
134 |
tgacagcagcaacaattattccgttctgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaa |
229 |
Q |
| |
|
||| || |||| | |||| || |||||| ||||||||| | ||||||||||||||||||| |||||| | |||| ||| |||||||||| |
|
|
| T |
5267961 |
tga---cattaacattaattcagtactgagattgagttaccatcatctcccttccaatctgaagcgctgtttttcttattgttccttatttcccaa |
5267869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 6917009 - 6916936
Alignment:
| Q |
159 |
ctgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaaggg |
232 |
Q |
| |
|
||||||||||||||||||| ||| |||| |||||||||||||||||||| || | ||| |||||||||||||| |
|
|
| T |
6917009 |
ctgagaatgagttaccttaatctctcttcaaatctgaagcattgttttgcttactgttccatatttcccaaggg |
6916936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 6520312 - 6520384
Alignment:
| Q |
160 |
tgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaaggg |
232 |
Q |
| |
|
||||| ||||||||| || |||||||||||||| |||| |||||||||||||| |||||| ||||||||||| |
|
|
| T |
6520312 |
tgagattgagttaccataatctcccttccaatctaaagcgttgttttgcatattgttctatttttcccaaggg |
6520384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 232
Target Start/End: Original strand, 6722145 - 6722288
Alignment:
| Q |
86 |
tgaatgggttaagatattggagactgatttgcggcgtttacccaagggtgacagcagcaacaattattccgttctgagaatgagttaccttagcctccct |
185 |
Q |
| |
|
|||||||| | |||||||||||||||||||| || ||||| | ||||||| | || ||| | | |||| || ||| |||||| | ||| ||||||| |
|
|
| T |
6722145 |
tgaatgggatcagatattggagactgatttgtggtgtttatcagagggtgagaaca---acattaaccccgtactaagattgagtttctttaacctccct |
6722241 |
T |
 |
| Q |
186 |
tccaatctgaagcattgttttgcatattattctatatttcccaaggg |
232 |
Q |
| |
|
||| ||||||||| ||||||||| |||| |||||||||||||||||| |
|
|
| T |
6722242 |
tccgatctgaagcgttgttttgcttattgttctatatttcccaaggg |
6722288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 8568972 - 8569075
Alignment:
| Q |
34 |
ctttagctctgaaaacactggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattggagactgatttgcggcgtttacccaaggg |
133 |
Q |
| |
|
|||||||| |||||||| |||||| |||||||||||||||||| || || ||||||| ||| ||||||||||||||| || ||| |||| | ||||| |
|
|
| T |
8568972 |
ctttagctgtgaaaacattggggaatctcttgcaaagaaaattttctcaaggtgaatggtctaacatattggagactgatatgtggcatttatcgaaggg |
8569071 |
T |
 |
| Q |
134 |
tgac |
137 |
Q |
| |
|
|||| |
|
|
| T |
8569072 |
tgac |
8569075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 5298718 - 5298661
Alignment:
| Q |
52 |
tggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattggagac |
109 |
Q |
| |
|
|||||| |||||||| |||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
5298718 |
tggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagatattggagac |
5298661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 8569095 - 8569167
Alignment:
| Q |
160 |
tgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaaggg |
232 |
Q |
| |
|
||||| ||||||||| || |||||||||||||| |||| ||||||||| |||| ||| || ||||||||||| |
|
|
| T |
8569095 |
tgagattgagttaccataatctcccttccaatctcaagcgttgttttgcctattgttcaatttttcccaaggg |
8569167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 6554516 - 6554556
Alignment:
| Q |
85 |
atgaatgggttaagatattggagactgatttgcggcgttta |
125 |
Q |
| |
|
|||||||| |||||||||||||||||||| || |||||||| |
|
|
| T |
6554516 |
atgaatggattaagatattggagactgatatgtggcgttta |
6554556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 6735941 - 6735901
Alignment:
| Q |
85 |
atgaatgggttaagatattggagactgatttgcggcgttta |
125 |
Q |
| |
|
|||||||| |||||||||||||||||||| || |||||||| |
|
|
| T |
6735941 |
atgaatggattaagatattggagactgatatgtggcgttta |
6735901 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 7587754 - 7587682
Alignment:
| Q |
160 |
tgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaaggg |
232 |
Q |
| |
|
||||| ||||||||| || ||||| |||||||| |||| ||||||||| | || ||| |||||||||||||| |
|
|
| T |
7587754 |
tgagattgagttaccataatctcccatccaatctaaagcgttgttttgccttttgttcaatatttcccaaggg |
7587682 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 7587874 - 7587802
Alignment:
| Q |
37 |
tagctctgaaaacactggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattggagac |
109 |
Q |
| |
|
||||| |||||||| |||||| ||| ||||||||||||| || || ||||||| |||||||||||||||| |
|
|
| T |
7587874 |
tagctgtgaaaacattggggaaactcctgcaaagaaaattttctcaagctgaatggtttaagatattggagac |
7587802 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 8471443 - 8471371
Alignment:
| Q |
160 |
tgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaaggg |
232 |
Q |
| |
|
||||| ||||||||| || ||||||||| |||||||||| |||||||| || | ||||||||||| ||||| |
|
|
| T |
8471443 |
tgagattgagttaccataacctcccttctaatctgaagcgctgttttgcctactgctctatatttcctaaggg |
8471371 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 6573465 - 6573517
Alignment:
| Q |
180 |
ctcccttccaatctgaagcattgttttgcatattattctatatttcccaaggg |
232 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
6573465 |
ctcccttccaatctaaagcgttgttttgcatattgttccatatttcccaaggg |
6573517 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 6573322 - 6573401
Alignment:
| Q |
34 |
ctttagctctgaaaacactggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattggagactgat |
113 |
Q |
| |
|
||||||| |||||||| |||||| |||||||||||||||||| || | ||||||| ||||||||||||| |||||| |
|
|
| T |
6573322 |
ctttagccgtgaaaacattggggaatctcttgcaaagaaaattttctcagggtgaatggtttaagatattggaaactgat |
6573401 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 25242184 - 25242256
Alignment:
| Q |
34 |
ctttagctctgaaaacactggggattctcttgcaaagaaaattctccgaaaatgaatgggttaagatattgga |
106 |
Q |
| |
|
|||||||| | |||||| ||||| |||||||| |||||||||||| || |||||||||||||||||||||| |
|
|
| T |
25242184 |
ctttagctgtaaaaacaacggggaatctcttgcgaagaaaattctctcaacatgaatgggttaagatattgga |
25242256 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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