View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14484_low_87 (Length: 214)
Name: NF14484_low_87
Description: NF14484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14484_low_87 |
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Alignment Details
Target: chr2 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 45165251 - 45165067
Alignment:
| Q |
15 |
cacagactcacctagcaacatcaatcgcaattcttaaccggatataccaagttaaagacgacccacgagtaggccctacaattgttaataccaatgaaaa |
114 |
Q |
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| T |
45165251 |
cacagactcacctagcaacatcaatcgcaattcttaaccggatataccaagttaaagacgatccacgagtaggccctacaattgttaataccaatgaaaa |
45165152 |
T |
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| Q |
115 |
aattatatagtggttaaattcccccaaaatgggatatatttccctcttttctaaatcaacattaataaaaatctaccgtgcaatt |
199 |
Q |
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| T |
45165151 |
aattatatagtggttaaattcccccaaaatgggatatattttcctcttttctaaatcaacattagtaaaaatctaccgtgcaatt |
45165067 |
T |
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