View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14484_low_90 (Length: 207)
Name: NF14484_low_90
Description: NF14484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14484_low_90 |
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Alignment Details
Target: chr5 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 29793676 - 29793507
Alignment:
| Q |
20 |
acacccaaaccctttacaatcccagcagcaaacccaccaagaaaacaatcccccgccccagttggatcaacctgacaagcttcaaaaggatcaaccatca |
119 |
Q |
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| T |
29793676 |
acacccaaaccctttacaatcccagcagcaaacccaccaagaaaacaatcccctgccccagttggatcaacctgacaagcttcaaaaggatcaaccatca |
29793577 |
T |
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| Q |
120 |
aacacccatctttcgagaaaacctcacacccatctttcccatgcgtgaccaccacgcaacaccattttct |
189 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29793576 |
aacacccatctttcgagaaaacctcacacccatctttcccatgcgtgaccaccacgcaacaccattttct |
29793507 |
T |
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