View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14487_high_18 (Length: 242)
Name: NF14487_high_18
Description: NF14487
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14487_high_18 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 1315649 - 1315425
Alignment:
| Q |
1 |
ttctttggttaggctgccaagtgctaagaggtctctttaccctcatctgggaattataagactggcttagccacctacctcaccggataaagaacaaaat |
100 |
Q |
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| T |
1315649 |
ttctttggttaggctgccaagtgctaagaggtctctttaccctcatctgggaattataagactggcttagccacctacctcaccggataaagaacaaaat |
1315550 |
T |
|
| Q |
101 |
tctctcacaatcttttcttctttgtgtcgactaaagatcctagatcatcatacaactatggcaggtacacacacctctaatttattctcaaattataagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
1315549 |
tctctcacaatcttttcttctttgtgtcgactaaagatcctagatcatcatacaactatggcaggtacacacacctctaatttattctcaaattatcagt |
1315450 |
T |
|
| Q |
201 |
atggttatat-caatatattgaatc |
224 |
Q |
| |
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|||||||||| |||||||||||||| |
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|
| T |
1315449 |
atggttatatgcaatatattgaatc |
1315425 |
T |
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