View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14487_low_7 (Length: 445)

Name: NF14487_low_7
Description: NF14487
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14487_low_7
NF14487_low_7
[»] chr2 (30 HSPs)
chr2 (264-421)||(36161230-36161387)
chr2 (94-174)||(36161150-36161230)
chr2 (374-421)||(15961793-15961840)
chr2 (374-421)||(15962150-15962197)
chr2 (374-421)||(17324015-17324062)
chr2 (374-421)||(33532729-33532776)
chr2 (374-421)||(11350180-11350227)
chr2 (373-420)||(17325235-17325282)
chr2 (374-421)||(39420761-39420808)
chr2 (374-420)||(32810869-32810915)
chr2 (374-421)||(936876-936923)
chr2 (374-421)||(32196972-32197019)
chr2 (386-420)||(10862063-10862097)
chr2 (385-421)||(93142-93178)
chr2 (385-421)||(883914-883950)
chr2 (385-421)||(901987-902023)
chr2 (385-421)||(3976475-3976511)
chr2 (385-421)||(9889323-9889359)
chr2 (385-421)||(11969116-11969152)
chr2 (385-421)||(17727468-17727504)
chr2 (385-421)||(20998993-20999029)
chr2 (385-421)||(21214205-21214241)
chr2 (385-421)||(25286264-25286300)
chr2 (385-421)||(25441760-25441796)
chr2 (385-421)||(25621289-25621325)
chr2 (385-421)||(33985775-33985811)
chr2 (385-421)||(34775421-34775457)
chr2 (385-413)||(39583258-39583286)
chr2 (385-421)||(42768338-42768374)
chr2 (385-421)||(43195848-43195884)
[»] chr8 (23 HSPs)
chr8 (118-206)||(26039248-26039336)
chr8 (262-353)||(26039539-26039626)
chr8 (374-422)||(38287957-38288005)
chr8 (374-421)||(35908742-35908789)
chr8 (374-422)||(17607207-17607255)
chr8 (374-421)||(15711560-15711607)
chr8 (374-420)||(20232400-20232446)
chr8 (380-421)||(14019872-14019913)
chr8 (374-421)||(18464134-18464180)
chr8 (385-421)||(8559645-8559681)
chr8 (385-421)||(10989038-10989074)
chr8 (385-421)||(10989245-10989281)
chr8 (385-421)||(16454639-16454675)
chr8 (385-421)||(18905920-18905956)
chr8 (385-421)||(21653391-21653427)
chr8 (385-421)||(21653868-21653904)
chr8 (385-421)||(32931465-32931501)
chr8 (385-421)||(34248141-34248177)
chr8 (385-421)||(34248423-34248459)
chr8 (385-421)||(36993951-36993987)
chr8 (385-421)||(36997230-36997266)
chr8 (385-421)||(43599375-43599411)
chr8 (385-421)||(43984320-43984356)
[»] chr5 (32 HSPs)
chr5 (366-421)||(2471677-2471733)
chr5 (374-421)||(83804-83851)
chr5 (374-421)||(84027-84074)
chr5 (374-421)||(5095894-5095941)
chr5 (374-421)||(19439924-19439971)
chr5 (374-421)||(29396336-29396383)
chr5 (374-421)||(22196319-22196366)
chr5 (373-421)||(14769824-14769872)
chr5 (385-420)||(22196557-22196592)
chr5 (374-421)||(24792115-24792162)
chr5 (374-421)||(30329900-30329947)
chr5 (374-421)||(32395307-32395354)
chr5 (385-422)||(24918224-24918261)
chr5 (385-422)||(24994132-24994169)
chr5 (385-421)||(48108-48144)
chr5 (385-421)||(48315-48351)
chr5 (385-421)||(1892094-1892130)
chr5 (385-421)||(2908773-2908809)
chr5 (385-421)||(12965250-12965286)
chr5 (385-421)||(13413648-13413684)
chr5 (385-421)||(13843761-13843797)
chr5 (385-421)||(28358039-28358075)
chr5 (385-421)||(29432476-29432512)
chr5 (385-421)||(34457160-34457196)
chr5 (385-421)||(34457367-34457403)
chr5 (385-421)||(35526992-35527028)
chr5 (385-421)||(35527278-35527314)
chr5 (385-421)||(37656736-37656772)
chr5 (385-421)||(37995638-37995674)
chr5 (385-421)||(38131828-38131864)
chr5 (385-421)||(38376795-38376831)
chr5 (385-421)||(40169045-40169081)
[»] chr7 (30 HSPs)
chr7 (374-421)||(27585320-27585367)
chr7 (374-421)||(34914913-34914960)
chr7 (374-421)||(27729467-27729514)
chr7 (374-421)||(36495730-36495777)
chr7 (374-421)||(36495953-36496000)
chr7 (374-421)||(47346087-47346134)
chr7 (374-421)||(47346316-47346363)
chr7 (372-421)||(33909201-33909250)
chr7 (374-421)||(14991502-14991549)
chr7 (374-421)||(15421113-15421160)
chr7 (374-421)||(34748842-34748889)
chr7 (374-421)||(36270463-36270510)
chr7 (375-421)||(36270691-36270737)
chr7 (374-420)||(44314307-44314353)
chr7 (372-421)||(33909370-33909419)
chr7 (385-421)||(24240410-24240446)
chr7 (374-421)||(24240187-24240234)
chr7 (375-421)||(22686725-22686771)
chr7 (386-424)||(28910226-28910264)
chr7 (374-420)||(37756158-37756203)
chr7 (385-421)||(1663608-1663644)
chr7 (385-421)||(6783102-6783138)
chr7 (385-421)||(10406590-10406626)
chr7 (385-421)||(19843547-19843583)
chr7 (385-421)||(23396673-23396709)
chr7 (385-421)||(32000881-32000917)
chr7 (385-421)||(36092396-36092432)
chr7 (385-421)||(41670897-41670933)
chr7 (385-421)||(43384284-43384320)
chr7 (385-421)||(48116300-48116336)
[»] chr3 (33 HSPs)
chr3 (374-421)||(24453842-24453889)
chr3 (374-420)||(16051528-16051574)
chr3 (376-421)||(11244536-11244581)
chr3 (374-421)||(10450641-10450688)
chr3 (378-421)||(15820602-15820645)
chr3 (374-420)||(16060878-16060924)
chr3 (374-421)||(10450417-10450464)
chr3 (374-421)||(48511632-48511679)
chr3 (374-416)||(16045363-16045405)
chr3 (374-414)||(10856619-10856659)
chr3 (374-421)||(9180432-9180479)
chr3 (374-421)||(40769905-40769952)
chr3 (374-415)||(53966323-53966364)
chr3 (385-421)||(3985837-3985873)
chr3 (385-421)||(9264090-9264126)
chr3 (385-421)||(9264297-9264333)
chr3 (385-421)||(10453707-10453743)
chr3 (385-421)||(22407445-22407481)
chr3 (385-421)||(22407652-22407688)
chr3 (383-419)||(38300285-38300321)
chr3 (385-421)||(38300756-38300792)
chr3 (385-421)||(39078775-39078811)
chr3 (385-421)||(39956678-39956714)
chr3 (385-421)||(44573390-44573426)
chr3 (385-421)||(44573703-44573739)
chr3 (385-421)||(44574000-44574036)
chr3 (385-421)||(49477391-49477427)
chr3 (385-421)||(49477598-49477634)
chr3 (385-421)||(50692387-50692423)
chr3 (385-421)||(50692590-50692626)
chr3 (385-421)||(51338407-51338443)
chr3 (385-421)||(51642432-51642468)
chr3 (385-421)||(51642639-51642675)
[»] chr1 (24 HSPs)
chr1 (374-421)||(17295042-17295089)
chr1 (374-421)||(29228512-29228559)
chr1 (366-421)||(12287912-12287968)
chr1 (374-421)||(4187507-4187554)
chr1 (374-421)||(29228739-29228786)
chr1 (374-421)||(33562120-33562167)
chr1 (378-421)||(51722318-51722361)
chr1 (374-414)||(30604453-30604493)
chr1 (386-421)||(27957814-27957849)
chr1 (385-419)||(28509391-28509425)
chr1 (372-418)||(45443287-45443333)
chr1 (385-421)||(102085-102121)
chr1 (385-421)||(463087-463123)
chr1 (385-421)||(2104264-2104300)
chr1 (385-421)||(11149427-11149463)
chr1 (385-421)||(18585102-18585138)
chr1 (385-421)||(19937047-19937083)
chr1 (385-421)||(20735586-20735622)
chr1 (385-421)||(29272911-29272947)
chr1 (385-421)||(29273070-29273106)
chr1 (385-421)||(29273229-29273265)
chr1 (385-421)||(31305775-31305811)
chr1 (385-421)||(36332176-36332212)
chr1 (385-421)||(38474347-38474383)
[»] chr4 (29 HSPs)
chr4 (374-421)||(46528916-46528963)
chr4 (374-421)||(11290233-11290280)
chr4 (119-192)||(38146743-38146817)
chr4 (374-421)||(50868006-50868053)
chr4 (383-421)||(25753607-25753645)
chr4 (383-421)||(27048410-27048448)
chr4 (375-421)||(33912107-33912153)
chr4 (215-265)||(38146511-38146561)
chr4 (385-421)||(5488431-5488467)
chr4 (385-421)||(12016687-12016723)
chr4 (385-421)||(12016895-12016931)
chr4 (385-421)||(15665217-15665253)
chr4 (385-421)||(21497687-21497723)
chr4 (385-421)||(21498251-21498287)
chr4 (385-421)||(21498595-21498631)
chr4 (385-421)||(23018534-23018570)
chr4 (385-421)||(28395241-28395277)
chr4 (385-421)||(28496509-28496545)
chr4 (385-421)||(29669367-29669403)
chr4 (385-421)||(36558470-36558506)
chr4 (385-421)||(41176770-41176806)
chr4 (385-421)||(43943737-43943773)
chr4 (385-421)||(43972419-43972455)
chr4 (385-421)||(45427256-45427292)
chr4 (385-421)||(50858076-50858112)
chr4 (385-429)||(50858381-50858425)
chr4 (385-421)||(51470547-51470583)
chr4 (385-421)||(52214679-52214715)
chr4 (385-421)||(53740246-53740282)
[»] chr6 (15 HSPs)
chr6 (374-422)||(30718744-30718792)
chr6 (374-421)||(25184274-25184321)
chr6 (374-421)||(26842784-26842831)
chr6 (375-421)||(25184067-25184113)
chr6 (374-421)||(8427614-8427661)
chr6 (385-421)||(1744846-1744882)
chr6 (385-421)||(8144081-8144117)
chr6 (385-421)||(10418342-10418378)
chr6 (385-421)||(10733442-10733478)
chr6 (385-421)||(15101115-15101151)
chr6 (385-421)||(16876834-16876870)
chr6 (385-421)||(16877014-16877050)
chr6 (385-421)||(17147909-17147945)
chr6 (385-421)||(24055113-24055149)
chr6 (385-421)||(28149857-28149893)
[»] scaffold0166 (1 HSPs)
scaffold0166 (374-421)||(34498-34545)


Alignment Details
Target: chr2 (Bit Score: 150; Significance: 4e-79; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 264 - 421
Target Start/End: Original strand, 36161230 - 36161387
Alignment:
Q  264 ctgtaagggatcatatagtgataaatcttcctaattcaatctatatatataccttgcagcatgctcgtctccatcttgccatatagacaactacaagtac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  36161230 ctgtaagggatcatatagtgataaatcttcctaattcaatctatatatataccttgcagcatgctcgtctccatcttgccatataaacaactacaagtat 36161329  T
Q  364 tgaattgtaagaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36161330 tgaattgtaagaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 36161387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 36161150 - 36161230
Alignment:
Q  94 cctttttattaaccaattgtctcgtacaaatctaaatgtatctctatttttctaaactagacaatgacccctttcataaac 174  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36161150 cctttttattaaccaattgtctcgtacaaatctaaatatatctctatttttctaaactagacaatgacccctttcataaac 36161230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 15961793 - 15961840
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||    
T  15961793 gaatattgaggcctaactcatccctacaaaaccggcttgtacggtgag 15961840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 15962150 - 15962197
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||    
T  15962150 gaatatagaggcctaactcatccctacaaaaccggcttgtacggtgag 15962197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 17324015 - 17324062
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  17324015 gaatatcgagacctaactcatccctacacaaccggcttgtatggtgag 17324062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 33532729 - 33532776
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  33532729 gaatatcaagacctaactcaaccctacaaaaccggcttgtacggtgag 33532776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 11350180 - 11350227
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  11350180 gaatatcaagacctaactcatccatacaaaaccggcttttacggtgag 11350227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 373 - 420
Target Start/End: Complemental strand, 17325282 - 17325235
Alignment:
Q  373 agaatatcgagacctaactcatccctacaaaaccggcttgtacggtga 420  Q
    ||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  17325282 agaatatcgaggcctaactcatccttacaaaaccggcttgtacagtga 17325235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 39420808 - 39420761
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| |||||||||||| |||||||||||||||||| |||||    
T  39420808 gaatatcgaggcctaactcatccgtacaaaaccggcttgtactgtgag 39420761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 420
Target Start/End: Original strand, 32810869 - 32810915
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtga 420  Q
    |||||||||| ||||||||||||| |||||||||||||||| |||||    
T  32810869 gaatatcgaggcctaactcatccccacaaaaccggcttgtaaggtga 32810915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 936923 - 936876
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| |||||||||||  |||||||| |||||||||||||||    
T  936923 gaatatcgaggcctaactcatctatacaaaactggcttgtacggtgag 936876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 32197019 - 32196972
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| |||||| ||||| |||||||||| |||||||||||||    
T  32197019 gaatatcgagtcctaacacatccttacaaaaccgacttgtacggtgag 32196972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 420
Target Start/End: Original strand, 10862063 - 10862097
Alignment:
Q  386 ctaactcatccctacaaaaccggcttgtacggtga 420  Q
    ||||||||||| |||||||||||||||||||||||    
T  10862063 ctaactcatccttacaaaaccggcttgtacggtga 10862097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 93142 - 93178
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  93142 cctaactcatccttacaaaaccggcttgtaaggtgag 93178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 883950 - 883914
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  883950 cctaactcatccttacaaaaccggcttgtaaggtgag 883914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 902023 - 901987
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  902023 cctaactcatccttacaaaaccggcttgtaaggtgag 901987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 3976475 - 3976511
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  3976475 cctaactcatccttacaaaaccggcttgtaaggtgag 3976511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 9889323 - 9889359
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  9889323 cctaactcatccttacaaaaccggcttgtatggtgag 9889359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 11969152 - 11969116
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  11969152 cctaactcatccttacaaaaccggcttgtaaggtgag 11969116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 17727504 - 17727468
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  17727504 cctaactcatccttacaaaaccggcttgtaaggtgag 17727468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 20998993 - 20999029
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  20998993 cctaactcatccttacaaaaccggcttgtaaggtgag 20999029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 21214205 - 21214241
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  21214205 cctaactcatccttacaaaaccggcttgtaaggtgag 21214241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 25286264 - 25286300
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  25286264 cctaactcatccttacaaaaccggcttgtaaggtgag 25286300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 25441796 - 25441760
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  25441796 cctaactcatccttacaaaaccggcttgtaaggtgag 25441760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 25621289 - 25621325
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  25621289 cctaactcatccttacaaaaccggcttgtaaggtgag 25621325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 33985775 - 33985811
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  33985775 cctaactcatccttacaaaaccggcttgtaaggtgag 33985811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 34775457 - 34775421
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  34775457 cctaactcatccttacaaaaccggcttgtaaggtgag 34775421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 413
Target Start/End: Complemental strand, 39583286 - 39583258
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgt 413  Q
    |||||||||||||||||||||||||||||    
T  39583286 cctaactcatccctacaaaaccggcttgt 39583258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 42768338 - 42768374
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  42768338 cctaactcatccttacaaaaccggcttgtaaggtgag 42768374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 43195884 - 43195848
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  43195884 cctaactcatccttacaaaaccggcttgtaaggtgag 43195848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 6e-38; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 26039248 - 26039336
Alignment:
Q  118 tacaaatctaaatgtatctctatttttctaaactagacaatgacccctttcataaacattaatagataccattctacagatatcctagc 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  26039248 tacaaatctaaatgtatctctatttttctaaactagacaatgacccatttcgtaaacattaatagataccattctacagatatcctagc 26039336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 26039539 - 26039626
Alignment:
Q  262 ccctgtaagggatcatatagtgataaatcttcctaattcaatctatatatataccttgcagcatgctcgtctccatcttgccatatagacaa 353  Q
    |||| |||||||||||||||| ||||| ||||||||| ||||||||||  ||   ||||||||| || ||||||||||||||||||||||||    
T  26039539 ccctataagggatcatatagttataaagcttcctaatccaatctatat-gat---ttgcagcattcttgtctccatcttgccatatagacaa 26039626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 374 - 422
Target Start/End: Original strand, 38287957 - 38288005
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgagt 422  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  38287957 gaatatcgagacctaactcatccttacaaaaccagcttgtacggtgagt 38288005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 35908789 - 35908742
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  35908789 gaatatcgaggcctaactcatccttacaaaaccggcttgtacggtgag 35908742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 422
Target Start/End: Original strand, 17607207 - 17607255
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgagt 422  Q
    |||||||||| |||||||||||| |||||||| ||||||||||||||||    
T  17607207 gaatatcgaggcctaactcatccttacaaaactggcttgtacggtgagt 17607255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 15711607 - 15711560
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  15711607 gaatatcgaggcctaactcatccctataaaacaggcttgtacggtgag 15711560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 420
Target Start/End: Original strand, 20232400 - 20232446
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtga 420  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||    
T  20232400 gaatatcgaggcctaactcatctatacaaaaccggcttgtacggtga 20232446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 14019913 - 14019872
Alignment:
Q  380 cgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  14019913 cgagacctaactcatccttacaaaaccggcttgttcggtgag 14019872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 18464180 - 18464134
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| |||||||| |||||||||| |||||||||||||||||    
T  18464180 gaatatcgaggcctaactcgtccctacaaa-ccggcttgtacggtgag 18464134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 8559681 - 8559645
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  8559681 cctaactcatccttacaaaaccggcttgtaaggtgag 8559645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 10989038 - 10989074
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  10989038 cctaactcatccttacaaaaccggcttgtaaggtgag 10989074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 10989245 - 10989281
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  10989245 cctaactcatccttacaaaaccggcttgtaaggtgag 10989281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 16454639 - 16454675
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  16454639 cctaactcatccttacaaaaccggcttgtaaggtgag 16454675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 18905956 - 18905920
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  18905956 cctaactcatccttacaaaaccggcttgtaaggtgag 18905920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 21653427 - 21653391
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  21653427 cctaactcatccttacaaaaccggcttgtaaggtgag 21653391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 21653904 - 21653868
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  21653904 cctaactcatccttacaaaaccggcttgtaaggtgag 21653868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 32931501 - 32931465
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  32931501 cctaactcatccttacaaaaccggcttgtaaggtgag 32931465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 34248177 - 34248141
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  34248177 cctaactcatccttacaaaaccggcttgtaaggtgag 34248141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 34248459 - 34248423
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  34248459 cctaactcatccttacaaaaccggcttgtaaggtgag 34248423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 36993951 - 36993987
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  36993951 cctaactcatccttacaaaaccggcttgtaaggtgag 36993987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 36997266 - 36997230
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  36997266 cctaactcatccttacaaaaccggcttgtaaggtgag 36997230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 43599411 - 43599375
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  43599411 cctaactcatccttacaaaaccggcttgtaaggtgag 43599375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 43984320 - 43984356
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  43984320 cctaactcatccttacaaaaccggcttgtatggtgag 43984356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 421
Target Start/End: Original strand, 2471677 - 2471733
Alignment:
Q  366 aattgtaag-aatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  2471677 aattgtaaggaatatcgagacctaactcatccatacaaaaccggcttgtacggtgag 2471733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 83804 - 83851
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  83804 gaatatcgagacctaactcatccatacaaaaccggcttgtacggtgag 83851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 84027 - 84074
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  84027 gaatatcgagacctaactcatccatacaaaaccggcttgtacggtgag 84074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 5095894 - 5095941
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  5095894 gaatatcgaggcctaactcatccctacaaaaccggcttgtagggtgag 5095941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 19439971 - 19439924
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  19439971 gaatatcaagacctaactcaaccctacaaaaccggcttgtacggtgag 19439924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 29396336 - 29396383
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  29396336 gaatatcgaggcctaactcatccgtacaaaaccggcttgtacggtgag 29396383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 22196319 - 22196366
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| |||||||||||| |||||||||||||| |||||||||    
T  22196319 gaatatcgaggcctaactcatccttacaaaaccggcttttacggtgag 22196366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 421
Target Start/End: Original strand, 14769824 - 14769872
Alignment:
Q  373 agaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||| ||| |||||||||||| | ||||||||||||||||||||||    
T  14769824 agaatattgaggcctaactcatcctttcaaaaccggcttgtacggtgag 14769872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 22196557 - 22196592
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtga 420  Q
    |||||||||||| |||||||||||||||||||||||    
T  22196557 cctaactcatccttacaaaaccggcttgtacggtga 22196592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 24792115 - 24792162
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||||  ||||||||| | ||||||||||||||||||||||||    
T  24792115 gaatatcgaggtctaactcattcttacaaaaccggcttgtacggtgag 24792162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 30329947 - 30329900
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| ||||||| |||| |||||||||| |||||||||||||    
T  30329947 gaatatcgaggcctaactgatccatacaaaaccgacttgtacggtgag 30329900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 32395307 - 32395354
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| | |||||||||| |||||||||||||||||| |||||    
T  32395307 gaatatcgaggcgtaactcatccatacaaaaccggcttgtacagtgag 32395354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 24918261 - 24918224
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgagt 422  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  24918261 cctaactcatccttacaaaaccggcttgtaaggtgagt 24918224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 24994169 - 24994132
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgagt 422  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  24994169 cctaactcatccttacaaaaccggcttgtaaggtgagt 24994132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 48108 - 48144
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  48108 cctaactcatccttacaaaaccggcttgtaaggtgag 48144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 48315 - 48351
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  48315 cctaactcatccttacaaaaccggcttgtaaggtgag 48351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 1892094 - 1892130
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  1892094 cctaactcatccttacaaaaccggcttgtaaggtgag 1892130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 2908773 - 2908809
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  2908773 cctaactcatccttacaaaaccggcttgtaaggtgag 2908809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 12965250 - 12965286
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  12965250 cctaactcatccttacaaaaccggcttgtaaggtgag 12965286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 13413684 - 13413648
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  13413684 cctaactcatccttacaaaaccggcttgtaaggtgag 13413648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 13843797 - 13843761
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  13843797 cctaactcatccttacaaaaccggcttgtaaggtgag 13843761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 28358039 - 28358075
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  28358039 cctaactcatccttacaaaaccggcttgtaaggtgag 28358075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 29432512 - 29432476
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  29432512 cctaactcatccttacaaaaccggcttgtaaggtgag 29432476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 34457196 - 34457160
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  34457196 cctaactcatccttacaaaaccggcttgtaaggtgag 34457160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 34457403 - 34457367
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  34457403 cctaactcatccttacaaaaccggcttgtaaggtgag 34457367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 35526992 - 35527028
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  35526992 cctaactcatccttacaaaaccggcttgtaaggtgag 35527028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 35527278 - 35527314
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  35527278 cctaactcatccttacaaaaccggcttgtaaggtgag 35527314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 37656736 - 37656772
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  37656736 cctaactcatccttacaaaaccggcttgtaaggtgag 37656772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 37995638 - 37995674
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  37995638 cctaactcatccttacaaaaccggcttgtaaggtgag 37995674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 38131864 - 38131828
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  38131864 cctaactcatccttacaaaaccggcttgtaaggtgag 38131828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 38376831 - 38376795
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  38376831 cctaactcatccttacaaaaccggcttgtaaggtgag 38376795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 40169045 - 40169081
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  40169045 cctaactcatccttacaaaaccggcttgtaaggtgag 40169081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 7e-16; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 27585367 - 27585320
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27585367 gaatatcgagacctaactcatccttacaaaaccggcttgtacggtgag 27585320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 34914913 - 34914960
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  34914913 gaatatcgaggcctaactcatccctacaaaaccggcttgtacggtgag 34914960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 27729467 - 27729514
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  27729467 gaatatcgagacctaactcatccttacaaaatcggcttgtacggtgag 27729514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 36495777 - 36495730
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||    
T  36495777 gaatatcgaggcctaactcatccctacaaaaccggcttctacggtgag 36495730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 36496000 - 36495953
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||    
T  36496000 gaatatagaggcctaactcatccctacaaaaccggcttgtacggtgag 36495953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 47346087 - 47346134
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  47346087 gaatatcgaggcctaactcatccgtacaaaaccggcttgtacggtgag 47346134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 47346316 - 47346363
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  47346316 gaatatcgaggcctaactcatccgtacaaaaccggcttgtacggtgag 47346363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 421
Target Start/End: Complemental strand, 33909250 - 33909201
Alignment:
Q  372 aagaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| |||||||||||| |||||||||||||||||| |||||    
T  33909250 aagaatatcgaggcctaactcatccatacaaaaccggcttgtacagtgag 33909201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 14991502 - 14991549
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||||||||||||||||| ||||||| || |||||||||||||    
T  14991502 gaatatcgagacctaactcatccttacaaaatcgacttgtacggtgag 14991549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 15421113 - 15421160
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||||||||||||||||| ||||||| || |||||||||||||    
T  15421113 gaatatcgagacctaactcatccttacaaaatcgacttgtacggtgag 15421160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 34748889 - 34748842
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  34748889 gaatatcgaggtctaactcatccttacaaaaccggcttgtacggtgag 34748842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 36270463 - 36270510
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| |||||||||||| |||||| |||||||||||||||||    
T  36270463 gaatatcgaggcctaactcatccttacaaagccggcttgtacggtgag 36270510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 36270691 - 36270737
Alignment:
Q  375 aatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||| |||||||||||| |||||||||||||||||| |||||    
T  36270691 aatatcgaggcctaactcatccttacaaaaccggcttgtacagtgag 36270737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 420
Target Start/End: Original strand, 44314307 - 44314353
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtga 420  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||    
T  44314307 gaatatcgaggcctaactcatctatacaaaaccggcttgtacggtga 44314353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 372 - 421
Target Start/End: Complemental strand, 33909419 - 33909370
Alignment:
Q  372 aagaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||| ||| |||||||||||| |||||||||||||||||| |||||    
T  33909419 aagaatattgaggcctaactcatccatacaaaaccggcttgtacagtgag 33909370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 24240410 - 24240446
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24240410 cctaactcatccgtacaaaaccggcttgtacggtgag 24240446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 24240187 - 24240234
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| |||||||||||  ||||||||||||||||| ||||||    
T  24240187 gaatatcgaggcctaactcatcagtacaaaaccggcttgtatggtgag 24240234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 22686725 - 22686771
Alignment:
Q  375 aatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||| | ||||| |||||||||||||||| ||||||||||||||    
T  22686725 aatatcggggcctaattcatccctacaaaaccagcttgtacggtgag 22686771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 424
Target Start/End: Complemental strand, 28910264 - 28910226
Alignment:
Q  386 ctaactcatccctacaaaaccggcttgtacggtgagtgc 424  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  28910264 ctaactcatccttacaaaaccggcttgtaaggtgagtgc 28910226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 420
Target Start/End: Original strand, 37756158 - 37756203
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtga 420  Q
    |||||||||| |||||||||||| || ||||||||||||||||||||    
T  37756158 gaatatcgaggcctaactcatccata-aaaaccggcttgtacggtga 37756203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 1663608 - 1663644
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  1663608 cctaactcatccttacaaaaccggcttgtaaggtgag 1663644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 6783138 - 6783102
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  6783138 cctaactcatccttacaaaaccggcttgtaaggtgag 6783102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 10406590 - 10406626
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  10406590 cctaactcatccttacaaaaccagcttgtacggtgag 10406626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 19843583 - 19843547
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  19843583 cctaactcatccttacaaaatcggcttgtacggtgag 19843547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 23396709 - 23396673
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  23396709 cctaactcatccttacaaaaccggcttgtaaggtgag 23396673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 32000917 - 32000881
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  32000917 cctaactcatccttacaaaaccggcttgtaaggtgag 32000881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 36092396 - 36092432
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  36092396 cctaactcatccttacaaaaccggcttgtaaggtgag 36092432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 41670933 - 41670897
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  41670933 cctaactcatccttacaaaaccggcttgtaaggtgag 41670897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 43384284 - 43384320
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  43384284 cctaactcatccttacaaaaccggcttgtaaggtgag 43384320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 48116300 - 48116336
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  48116300 cctaactcatccttacaaaaccggcttgtaaggtgag 48116336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 24453889 - 24453842
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24453889 gaatatcgagacctaactcatccatacaaaaccggcttgtacggtgag 24453842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 420
Target Start/End: Original strand, 16051528 - 16051574
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtga 420  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  16051528 gaatatcgagacctaactcatccttacaaaaccggcttgtacggtga 16051574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 11244536 - 11244581
Alignment:
Q  376 atatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  11244536 atatcgagacctaactcatccttacaaaaccggcttgtacggtgag 11244581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 10450641 - 10450688
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  10450641 gaatatcgaggcctaactcatccccacaaaaccggcttgtacggtgag 10450688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 15820602 - 15820645
Alignment:
Q  378 atcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  15820602 atcgaggcctaactcatccctacaaaaccggcttgtacggtgag 15820645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 374 - 420
Target Start/End: Original strand, 16060878 - 16060924
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtga 420  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  16060878 gaatatcgagacctaactcatccttacaaaaccagcttgtacggtga 16060924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 10450417 - 10450464
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  10450417 gaatatcgaggcctaactcatccccacaaaaccagcttgtacggtgag 10450464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 48511632 - 48511679
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||| ||| |||||||||||| ||||||||||||||||||||||||    
T  48511632 gaatattgaggcctaactcatccatacaaaaccggcttgtacggtgag 48511679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 416
Target Start/End: Original strand, 16045363 - 16045405
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacg 416  Q
    ||||||||||||||||||||||| ||||||||| |||||||||    
T  16045363 gaatatcgagacctaactcatccttacaaaaccagcttgtacg 16045405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 414
Target Start/End: Original strand, 10856619 - 10856659
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgta 414  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  10856619 gaatatcgaggcctaactcatccttacaaaaccggcttgta 10856659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 9180479 - 9180432
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| ||||||| |||| ||||||||| ||||||||||||||    
T  9180479 gaatatcgaggcctaactgatccttacaaaaccagcttgtacggtgag 9180432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 40769905 - 40769952
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||| ||| |||||||||||| |||||||||||||||||| |||||    
T  40769905 gaatattgaggcctaactcatccatacaaaaccggcttgtacagtgag 40769952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 415
Target Start/End: Complemental strand, 53966364 - 53966323
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtac 415  Q
    |||||| ||| |||||||||||| ||||||||||||||||||    
T  53966364 gaatattgaggcctaactcatccatacaaaaccggcttgtac 53966323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 3985873 - 3985837
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  3985873 cctaactcatccttacaaaaccggcttgtaaggtgag 3985837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 9264090 - 9264126
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  9264090 cctaactcatccttacaaaaccggcttgtaaggtgag 9264126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 9264297 - 9264333
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  9264297 cctaactcatccttacaaaaccggcttgtaaggtgag 9264333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 10453707 - 10453743
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  10453707 cctaactcatccttacaaaaccggcttgtaaggtgag 10453743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 22407445 - 22407481
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  22407445 cctaactcatccttacaaaaccggcttgtaaggtgag 22407481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 22407652 - 22407688
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  22407652 cctaactcatccttacaaaaccggcttgtaaggtgag 22407688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 419
Target Start/End: Original strand, 38300285 - 38300321
Alignment:
Q  383 gacctaactcatccctacaaaaccggcttgtacggtg 419  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  38300285 gacctaactcatccttacaaaaccggcttgtaaggtg 38300321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 38300756 - 38300792
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  38300756 cctaactcatccgtacaaaaccggcttgtaaggtgag 38300792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 39078775 - 39078811
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  39078775 cctaactcatccttacaaaaccggcttgtaaggtgag 39078811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 39956678 - 39956714
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  39956678 cctaactcatccttacaaaaccggcttgtaaggtgag 39956714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 44573426 - 44573390
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  44573426 cctaactcatccttacaaaaccggcttgtagggtgag 44573390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 44573739 - 44573703
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  44573739 cctaactcatccttacaaaaccggcttgtaaggtgag 44573703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 44574036 - 44574000
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  44574036 cctaactcatccttacaaaaccggcttgtaaggtgag 44574000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 49477427 - 49477391
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  49477427 cctaactcatccttacaaaaccggcttgtaaggtgag 49477391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 49477634 - 49477598
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  49477634 cctaactcatccttacaaaaccggcttgtaaggtgag 49477598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 50692423 - 50692387
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  50692423 cctaactcatccttacaaaaccggcttgtaaggtgag 50692387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 50692626 - 50692590
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  50692626 cctaactcatccttacaaaaccggcttgtaaggtgag 50692590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 51338407 - 51338443
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  51338407 cctaactcatccttacaaaaccggcttgtaaggtgag 51338443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 51642432 - 51642468
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  51642432 cctaactcatccttacaaaaccggcttgtaaggtgag 51642468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 51642639 - 51642675
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  51642639 cctaactcatccttacaaaaccggcttgtaaggtgag 51642675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 7e-16; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 17295089 - 17295042
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  17295089 gaatatcgaggcctaactcatccctacaaaaccggcttgtacggtgag 17295042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 29228559 - 29228512
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  29228559 gaatatcgaggcctaactcatccctacaaaaccggcttgtacggtgag 29228512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 421
Target Start/End: Complemental strand, 12287968 - 12287912
Alignment:
Q  366 aattgtaa-gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||| |||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  12287968 aattgtaacgaatatcgaggcctaactcatccttacaaaaccagcttgtacggtgag 12287912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 4187507 - 4187554
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| | |||||||||| ||||||||||||||||||||||||    
T  4187507 gaatatcgaggcgtaactcatccatacaaaaccggcttgtacggtgag 4187554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 29228786 - 29228739
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| ||||||||||||||||||| ||||||||||| |||||    
T  29228786 gaatatcgaggcctaactcatccctacaaatccggcttgtacagtgag 29228739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 33562120 - 33562167
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||| || ||||||||||||| |||||||||||||||||||||||    
T  33562120 gaatatcaaggcctaactcatccccacaaaaccggcttgtacggtgag 33562167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 51722361 - 51722318
Alignment:
Q  378 atcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  51722361 atcgaggcctaactcatccttacaaaaccggcttgtacggtgag 51722318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 414
Target Start/End: Original strand, 30604453 - 30604493
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgta 414  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  30604453 gaatatcaagacctaactcatccatacaaaaccggcttgta 30604493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 421
Target Start/End: Original strand, 27957814 - 27957849
Alignment:
Q  386 ctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||||| ||||||||||||||||||||||||    
T  27957814 ctaactcatccttacaaaaccggcttgtacggtgag 27957849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 419
Target Start/End: Original strand, 28509391 - 28509425
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtg 419  Q
    |||||||||||| ||||||||||||||||||||||    
T  28509391 cctaactcatccttacaaaaccggcttgtacggtg 28509425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 418
Target Start/End: Complemental strand, 45443333 - 45443287
Alignment:
Q  372 aagaatatcgagacctaactcatccctacaaaaccggcttgtacggt 418  Q
    |||||||||||| ||||||| | || |||||||||||||||||||||    
T  45443333 aagaatatcgaggcctaactgaaccttacaaaaccggcttgtacggt 45443287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 102085 - 102121
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  102085 cctaactcaaccctacaaaaccggcttgtaaggtgag 102121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 463087 - 463123
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  463087 cctaactcatccttacaaaaccggcttgtaaggtgag 463123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 2104264 - 2104300
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  2104264 cctaactcatccttacaaaaccggcttgtaaggtgag 2104300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 11149427 - 11149463
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  11149427 cctaactcatccttacaaaaccggcttgtaaggtgag 11149463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 18585138 - 18585102
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| |||||||| |||||||||||||||    
T  18585138 cctaactcatccttacaaaactggcttgtacggtgag 18585102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 19937047 - 19937083
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  19937047 cctaactcatccttacaaaaccggcttgtaaggtgag 19937083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 20735622 - 20735586
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  20735622 cctaactcatccttacaaaaccggcttgtaaggtgag 20735586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 29272911 - 29272947
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  29272911 cctaactcatccttacaaaaccggcttgtaaggtgag 29272947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 29273070 - 29273106
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  29273070 cctaactcatccttacaaaaccggcttgtaaggtgag 29273106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 29273229 - 29273265
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  29273229 cctaactcatccttacaaaaccggcttgtaaggtgag 29273265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 31305811 - 31305775
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  31305811 cctaactcatccttacaaaaccggcttgtaaggtgag 31305775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 36332212 - 36332176
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  36332212 cctaactcatccttacaaaaccggcttgtaaggtgag 36332176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 38474383 - 38474347
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  38474383 cctaactcatccttacaaaaccggcttgtaaggtgag 38474347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 46528916 - 46528963
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  46528916 gaatatcgaggcctaactcatccatacaaaaccggcttgtacggtgag 46528963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 11290280 - 11290233
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||| ||| |||||||||||| ||||||||||||||||||||||||    
T  11290280 gaatattgaggcctaactcatccatacaaaaccggcttgtacggtgag 11290233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 38146817 - 38146743
Alignment:
Q  119 acaaatctaaatgtatctctatttttctaaactagacaatgacccctttcataa-acattaatagataccattct 192  Q
    ||||| ||| |||||||| ||||||||||||||||| ||||||||||| ||||| | ||| ||| ||||||||||    
T  38146817 acaaacctagatgtatctttatttttctaaactagataatgaccccttccataacaaattcataaataccattct 38146743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 50868006 - 50868053
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||| ||| ||| |||||||| ||||||||||||||||||||||||    
T  50868006 gaatattgaggcctgactcatccatacaaaaccggcttgtacggtgag 50868053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 421
Target Start/End: Original strand, 25753607 - 25753645
Alignment:
Q  383 gacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  25753607 gacctaactcatccttacaaaaccggcttgtaaggtgag 25753645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 421
Target Start/End: Original strand, 27048410 - 27048448
Alignment:
Q  383 gacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  27048410 gacctaactcatccttacaaaaccggcttgtaaggtgag 27048448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 421
Target Start/End: Complemental strand, 33912153 - 33912107
Alignment:
Q  375 aatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||| |||||||||||| |||||||||||||| ||| |||||    
T  33912153 aatatcgaggcctaactcatccttacaaaaccggcttatacagtgag 33912107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 38146561 - 38146511
Alignment:
Q  215 ttctatataacttgtattgttcttggagttaattccccaatcaagatccct 265  Q
    ||||||||| |||||| | ||||| |||||||||||| |||||||||||||    
T  38146561 ttctatatagcttgtactattcttagagttaattcccaaatcaagatccct 38146511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 5488467 - 5488431
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  5488467 cctaactcatccttacaaaaccggcttgtaaggtgag 5488431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 12016687 - 12016723
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  12016687 cctaactcatccttacaaaaccggcttgtaaggtgag 12016723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 12016895 - 12016931
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  12016895 cctaactcatccttacaaaaccggcttgtaaggtgag 12016931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 15665253 - 15665217
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  15665253 cctaactcatccttacaaaaccggcttgtaaggtgag 15665217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 21497687 - 21497723
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  21497687 cctaactcatccttacaaaaccggcttgtaaggtgag 21497723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 21498287 - 21498251
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  21498287 cctaactcatccttacaaaaccggcttgtaaggtgag 21498251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 21498631 - 21498595
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  21498631 cctaactcatccttacaaaaccggcttgtaaggtgag 21498595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 23018570 - 23018534
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  23018570 cctaactcatccttacaaaaccggcttgtaaggtgag 23018534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 28395277 - 28395241
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  28395277 cctaactcatccttacaaaaccggcttgtaaggtgag 28395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 28496509 - 28496545
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  28496509 cctaactcatccttacaaaaccggcttgtaaggtgag 28496545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 29669367 - 29669403
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  29669367 cctaactcatccttacaaaaccggcttgtaaggtgag 29669403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 36558470 - 36558506
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  36558470 cctaactcatccttacaaaaccggcttgtaaggtgag 36558506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 41176806 - 41176770
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  41176806 cctaactcatccttacaaaaccggcttgtaaggtgag 41176770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 43943773 - 43943737
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  43943773 cctaactcatccttacaaaaccggcttgtaaggtgag 43943737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 43972455 - 43972419
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  43972455 cctaactcatccttacaaaaccggcttgtaaggtgag 43972419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 45427256 - 45427292
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  45427256 cctaactcatccttacaaaaccggcttgtaaggtgag 45427292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 50858112 - 50858076
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  50858112 cctaactcatccttacaaaaccggcttgtaaggtgag 50858076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 50858425 - 50858381
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgagtgcctcct 429  Q
    |||||||||||| ||||||||||||||||| |  |||||||||||    
T  50858425 cctaactcatccttacaaaaccggcttgtaagaggagtgcctcct 50858381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 51470583 - 51470547
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  51470583 cctaactcatccttacaaaaccggcttgtaaggtgag 51470547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 52214715 - 52214679
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  52214715 cctaactcatccttacaaaaccggcttgtaaggtgag 52214679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 53740282 - 53740246
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  53740282 cctaactcatccttacaaaaccggcttgtaaggtgag 53740246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 30718792 - 30718744
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgagt 422  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  30718792 gaatatcgagacttaactcatccacacaaaaccggcttgtacggtgagt 30718744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 25184321 - 25184274
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  25184321 gaatatcgaggcctaactcatccccacaaaaccggcttgtaaggtgag 25184274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 26842831 - 26842784
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  26842831 gaatatcgaggcctaactcatccccacaaaaccagcttgtacggtgag 26842784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Complemental strand, 25184113 - 25184067
Alignment:
Q  375 aatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||| ||||||| ||||| |||||||||||||||||||||||    
T  25184113 aatatcgaggcctaacttatccccacaaaaccggcttgtacggtgag 25184067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 8427661 - 8427614
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||| ||||||||| || |||||||||| |||||||||||||    
T  8427661 gaatatcgaggcctaactcaaccttacaaaaccgacttgtacggtgag 8427614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 1744846 - 1744882
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  1744846 cctaactcatccttacaaaaccggcttgtaaggtgag 1744882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 8144117 - 8144081
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  8144117 cctaactcatccttacaaaaccggcttgtaaggtgag 8144081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 10418342 - 10418378
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  10418342 cctaactcatccttacaaaaccggcttgtaaggtgag 10418378  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 10733442 - 10733478
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  10733442 cctaactcatccttacaaaaccggcttgtaaggtgag 10733478  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 15101115 - 15101151
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  15101115 cctaactcatccttacaaaaccggcttgtaaggtgag 15101151  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 16876834 - 16876870
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  16876834 cctaactcatccttacaaaaccggcttgtaaggtgag 16876870  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 16877014 - 16877050
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  16877014 cctaactcatccttacaaaaccggcttgtaaggtgag 16877050  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 17147909 - 17147945
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  17147909 cctaactcatccttacaaaaccggcttgtaaggtgag 17147945  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 24055113 - 24055149
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  24055113 cctaactcatccttacaaaaccggcttgtaaggtgag 24055149  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 28149893 - 28149857
Alignment:
Q  385 cctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  28149893 cctaactcatccttacaaaaccggcttgtaaggtgag 28149857  T

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Target: scaffold0166 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 34498 - 34545
Alignment:
Q  374 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgag 421  Q
    ||||||||||  ||||||||| | ||||||||||||||||||||||||    
T  34498 gaatatcgaggtctaactcattcttacaaaaccggcttgtacggtgag 34545  T

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