View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14488_low_13 (Length: 269)
Name: NF14488_low_13
Description: NF14488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14488_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 32042427 - 32042176
Alignment:
| Q |
8 |
ataattctagaatacatgagtgtttgccagaggtggtataattataatattaacaaaaattaaattatgtatcc-------tctataaattaagaacata |
100 |
Q |
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| T |
32042427 |
ataattctagaatacatgagtgtttgccagaggtggtataattataatattaacaaaaattaaattatgtctcccaatggctctataaattaagaacata |
32042328 |
T |
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| Q |
101 |
tctcaagaagtaaattaaatcacaacaaataccttcctacaatttccttcttgctctcccaatttactannnnnnnnctctcaataccaccatggcagga |
200 |
Q |
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| T |
32042327 |
tctcaagaagcaaattaaatcacaacaaataccttcctacaatttccttcttgctctcccaatttactatattttttttctcaataccaccatggcagga |
32042228 |
T |
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| Q |
201 |
aagaaagtgaagcttgcattcataaccaatcacacagcaagaagggcaacgt |
252 |
Q |
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| T |
32042227 |
aagaaagtgaagcttgcattcataaccaatcacacagcaagaagggcaacgt |
32042176 |
T |
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