View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14488_low_15 (Length: 256)

Name: NF14488_low_15
Description: NF14488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14488_low_15
NF14488_low_15
[»] chr8 (25 HSPs)
chr8 (65-256)||(37543914-37544105)
chr8 (97-256)||(35202596-35202756)
chr8 (92-244)||(25149372-25149524)
chr8 (95-250)||(23976219-23976372)
chr8 (95-256)||(18323995-18324154)
chr8 (97-240)||(21124325-21124468)
chr8 (94-245)||(22426842-22426992)
chr8 (97-218)||(41358842-41358963)
chr8 (94-245)||(22469565-22469716)
chr8 (99-244)||(12106969-12107114)
chr8 (93-253)||(4289050-4289210)
chr8 (99-235)||(21184299-21184434)
chr8 (165-252)||(29585576-29585663)
chr8 (88-256)||(22326528-22326695)
chr8 (20-64)||(37544139-37544183)
chr8 (99-202)||(12106867-12106970)
chr8 (99-202)||(21124535-21124638)
chr8 (99-202)||(22469433-22469536)
chr8 (110-253)||(24609151-24609294)
chr8 (88-157)||(31253924-31253993)
chr8 (99-202)||(23976090-23976194)
chr8 (190-250)||(31253995-31254055)
chr8 (90-173)||(10289188-10289268)
chr8 (98-202)||(25149237-25149341)
chr8 (109-169)||(37494325-37494385)
[»] chr1 (15 HSPs)
chr1 (92-255)||(50335434-50335597)
chr1 (109-256)||(37607982-37608129)
chr1 (119-256)||(13735465-13735602)
chr1 (104-253)||(8097840-8097989)
chr1 (97-253)||(42847023-42847180)
chr1 (99-198)||(42847198-42847297)
chr1 (139-252)||(32374092-32374198)
chr1 (100-174)||(37608175-37608249)
chr1 (97-212)||(11633192-11633307)
chr1 (99-202)||(32373986-32374088)
chr1 (99-202)||(50335617-50335720)
chr1 (150-199)||(33745188-33745237)
chr1 (150-199)||(33746852-33746901)
chr1 (170-244)||(37608075-37608149)
chr1 (150-199)||(33746383-33746432)
[»] chr3 (34 HSPs)
chr3 (97-253)||(48755325-48755481)
chr3 (97-256)||(1426482-1426641)
chr3 (92-256)||(15031181-15031345)
chr3 (99-244)||(26498650-26498795)
chr3 (97-245)||(21514742-21514890)
chr3 (92-252)||(33342999-33343158)
chr3 (130-256)||(11989167-11989293)
chr3 (97-251)||(43562727-43562881)
chr3 (166-245)||(15005025-15005104)
chr3 (99-202)||(20759103-20759206)
chr3 (99-253)||(18445530-18445684)
chr3 (96-241)||(38498132-38498277)
chr3 (164-255)||(14434763-14434854)
chr3 (97-245)||(7300152-7300299)
chr3 (99-202)||(38498279-38498382)
chr3 (103-253)||(44967859-44968009)
chr3 (146-253)||(26840038-26840142)
chr3 (99-202)||(21514920-21515023)
chr3 (99-202)||(26498548-26498651)
chr3 (136-202)||(1426651-1426717)
chr3 (97-211)||(20758957-20759071)
chr3 (186-252)||(36383085-36383151)
chr3 (97-203)||(42453041-42453147)
chr3 (191-256)||(15031312-15031377)
chr3 (97-174)||(39541672-39541749)
chr3 (99-202)||(11989045-11989148)
chr3 (99-202)||(15031396-15031499)
chr3 (170-244)||(15031323-15031397)
chr3 (116-202)||(39541786-39541872)
chr3 (98-202)||(41984904-41985008)
chr3 (146-202)||(44968031-44968087)
chr3 (99-202)||(33343180-33343283)
chr3 (98-202)||(18445404-18445508)
chr3 (159-199)||(47199966-47200006)
[»] chr4 (39 HSPs)
chr4 (97-256)||(55382678-55382837)
chr4 (99-253)||(3369965-3370119)
chr4 (98-252)||(5448195-5448349)
chr4 (121-254)||(18830698-18830831)
chr4 (97-253)||(10380720-10380876)
chr4 (97-253)||(30470943-30471099)
chr4 (97-252)||(2634150-2634305)
chr4 (119-253)||(11821743-11821877)
chr4 (97-250)||(2063144-2063297)
chr4 (97-252)||(1387468-1387624)
chr4 (97-252)||(47943574-47943729)
chr4 (97-244)||(22017984-22018131)
chr4 (94-241)||(37695069-37695216)
chr4 (97-256)||(30378741-30378898)
chr4 (99-253)||(9826632-9826786)
chr4 (139-252)||(2232497-2232609)
chr4 (184-253)||(37695025-37695094)
chr4 (97-253)||(18500597-18500752)
chr4 (139-254)||(18836403-18836518)
chr4 (183-253)||(10757695-10757765)
chr4 (183-253)||(10970866-10970936)
chr4 (99-193)||(47463814-47463908)
chr4 (99-200)||(10757570-10757671)
chr4 (99-200)||(10970741-10970842)
chr4 (139-202)||(3391183-3391246)
chr4 (157-245)||(5324816-5324904)
chr4 (91-151)||(47463916-47463976)
chr4 (97-244)||(29908887-29909034)
chr4 (139-204)||(8951060-8951125)
chr4 (97-237)||(8951129-8951269)
chr4 (184-244)||(18830676-18830736)
chr4 (102-174)||(22017885-22017957)
chr4 (181-252)||(1387404-1387475)
chr4 (100-202)||(5324684-5324786)
chr4 (141-199)||(12034425-12034483)
chr4 (88-202)||(18830564-18830677)
chr4 (139-204)||(37694940-37695005)
chr4 (98-202)||(9826808-9826912)
chr4 (184-244)||(10380697-10380757)
[»] chr7 (22 HSPs)
chr7 (98-256)||(27508576-27508733)
chr7 (99-256)||(5080231-5080388)
chr7 (127-256)||(14197581-14197710)
chr7 (92-245)||(38761125-38761278)
chr7 (139-256)||(6441466-6441583)
chr7 (97-256)||(15000643-15000803)
chr7 (91-244)||(43257366-43257519)
chr7 (99-243)||(3404458-3404601)
chr7 (109-255)||(37787810-37787952)
chr7 (181-255)||(45012971-45013045)
chr7 (101-202)||(5080111-5080212)
chr7 (102-202)||(15272326-15272426)
chr7 (99-202)||(27508752-27508855)
chr7 (97-244)||(36150846-36150993)
chr7 (99-188)||(45013061-45013150)
chr7 (99-200)||(3404634-3404735)
chr7 (99-202)||(14197459-14197562)
chr7 (90-173)||(29934472-29934555)
chr7 (184-244)||(27508693-27508753)
chr7 (184-240)||(38761098-38761154)
chr7 (99-174)||(38760994-38761068)
chr7 (152-206)||(4617284-4617338)
[»] chr6 (18 HSPs)
chr6 (97-252)||(25089150-25089305)
chr6 (97-253)||(13536558-13536715)
chr6 (92-256)||(19295403-19295567)
chr6 (92-237)||(10588012-10588157)
chr6 (99-253)||(21222590-21222746)
chr6 (92-253)||(10862006-10862167)
chr6 (137-252)||(10672744-10672858)
chr6 (192-256)||(26705089-26705153)
chr6 (99-202)||(26705204-26705307)
chr6 (97-194)||(28752240-28752337)
chr6 (99-202)||(10587887-10587990)
chr6 (148-243)||(12651217-12651312)
chr6 (99-174)||(19295281-19295356)
chr6 (154-213)||(19780531-19780590)
chr6 (99-202)||(21222465-21222568)
chr6 (191-250)||(26705120-26705179)
chr6 (191-244)||(26705152-26705205)
chr6 (192-244)||(19295383-19295435)
[»] chr5 (21 HSPs)
chr5 (97-254)||(13753353-13753510)
chr5 (101-256)||(10760129-10760284)
chr5 (136-256)||(17497033-17497152)
chr5 (92-253)||(30100736-30100897)
chr5 (97-254)||(19564779-19564940)
chr5 (91-238)||(31912336-31912483)
chr5 (100-253)||(19491673-19491826)
chr5 (97-244)||(2555437-2555584)
chr5 (97-256)||(30852584-30852736)
chr5 (98-238)||(21943883-21944023)
chr5 (139-253)||(11297998-11298113)
chr5 (101-202)||(21211419-21211520)
chr5 (102-202)||(17497171-17497271)
chr5 (99-202)||(21943743-21943846)
chr5 (156-237)||(12895585-12895666)
chr5 (157-237)||(20430018-20430098)
chr5 (116-253)||(34419497-34419634)
chr5 (98-202)||(19491848-19491952)
chr5 (99-202)||(10760008-10760111)
chr5 (139-174)||(21211603-21211638)
chr5 (100-202)||(20429878-20429980)
[»] chr2 (12 HSPs)
chr2 (99-256)||(39598629-39598786)
chr2 (92-256)||(31819908-31820071)
chr2 (118-256)||(22092879-22093017)
chr2 (99-253)||(24007005-24007159)
chr2 (139-243)||(32092862-32092966)
chr2 (148-252)||(31499476-31499580)
chr2 (157-256)||(8219198-8219296)
chr2 (99-200)||(32092759-32092860)
chr2 (127-220)||(17914034-17914126)
chr2 (102-202)||(24006883-24006983)
chr2 (191-241)||(39598612-39598662)
chr2 (139-199)||(22093039-22093099)
[»] scaffold0102 (1 HSPs)
scaffold0102 (97-252)||(23890-24045)
[»] scaffold0003 (2 HSPs)
scaffold0003 (147-250)||(314126-314229)
scaffold0003 (191-244)||(314202-314255)
[»] scaffold0066 (1 HSPs)
scaffold0066 (97-250)||(15363-15516)
[»] scaffold0047 (1 HSPs)
scaffold0047 (92-241)||(11599-11747)
[»] scaffold0407 (6 HSPs)
scaffold0407 (139-245)||(1000-1106)
scaffold0407 (139-245)||(7464-7570)
scaffold0407 (191-252)||(961-1022)
scaffold0407 (191-252)||(7425-7486)
scaffold0407 (184-244)||(937-997)
scaffold0407 (184-244)||(7401-7461)
[»] scaffold0026 (1 HSPs)
scaffold0026 (101-253)||(57451-57603)
[»] scaffold0024 (2 HSPs)
scaffold0024 (99-253)||(127804-127958)
scaffold0024 (98-202)||(127980-128084)
[»] scaffold1300 (2 HSPs)
scaffold1300 (99-253)||(1357-1504)
scaffold1300 (98-202)||(1526-1630)
[»] scaffold0011 (2 HSPs)
scaffold0011 (139-241)||(190315-190417)
scaffold0011 (99-202)||(190178-190281)
[»] scaffold0018 (3 HSPs)
scaffold0018 (99-174)||(72115-72190)
scaffold0018 (92-174)||(71902-71983)
scaffold0018 (141-175)||(71979-72013)
[»] scaffold0049 (2 HSPs)
scaffold0049 (196-244)||(59807-59855)
scaffold0049 (105-202)||(59711-59808)
[»] scaffold0039 (1 HSPs)
scaffold0039 (99-172)||(27682-27755)


Alignment Details
Target: chr8 (Bit Score: 176; Significance: 7e-95; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 65 - 256
Target Start/End: Complemental strand, 37544105 - 37543914
Alignment:
Q  65 gctgacacatttttaaagcaatctttattggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattg 164  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37544105 gctgacacatttttaaagcaatctttattgaaaaattagtcactttagtccctgaatatgaaagaagtcgccattttagtccctgaatgtagataaattg 37544006  T
Q  165 caaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37544005 caaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 37543914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 97 - 256
Target Start/End: Original strand, 35202596 - 35202756
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    |||||||||| ||||||   ||||||||||||||||   |||||||||||||||||| | |||||||||||||| ||| || | |||||||| |||||||    
T  35202596 agattagtcattttagtcattgaataggaaagaagttatcattttagtccctgaatgcaaataaattgcaaaatggtccttaaatgtagactatgttagt 35202695  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagt-ccctgaatatagactccgt 256  Q
    ||||||| | ||||||||||||||| |||||| |||||||| |||||||| ||||||||||    
T  35202696 caatttagttcctgaatgcagattctgttagtcaatttagtcccctgaatgtagactccgt 35202756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 92 - 244
Target Start/End: Complemental strand, 25149524 - 25149372
Alignment:
Q  92 ttggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttg 191  Q
    |||| ||||||||||||||||| |||||||||||||  ||||| || | ||||| ||||||| ||||||| ||||||||| ||  ||| |||||||||||    
T  25149524 ttgggagattagtcactttagtccctgaataggaaatgagtcgtcactatagtctctgaatgcagataaactgcaaaataatctctgaatgtagactttg 25149425  T
Q  192 ttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    |||||||||||| || ||||||||||| || |||||| || ||||||||||||    
T  25149424 ttagtcaatttagtctctgaatgcagactctgttagtcaagttagtccctgaa 25149372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 95 - 250
Target Start/End: Complemental strand, 23976372 - 23976219
Alignment:
Q  95 gaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgtta 194  Q
    ||||||||||||||||||| ||| |||| ||||  ||||| ||||||||| ||||||||||||||||||| |||||||||  ||| ||||| || |||||    
T  23976372 gaagattagtcactttagt-cctcaataagaaatgagtcgtcattttagttcctgaatgtagataaattgtaaaatagtccctgaatgtag-ctctgtta 23976275  T
Q  195 gtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatataga 250  Q
    |||||||||  ||||||||||||| |||||| || ||||||| |||||||| ||||    
T  23976274 gtcaatttagcccctgaatgcagactccgttggtcaatttagcccctgaatgtaga 23976219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 95 - 256
Target Start/End: Original strand, 18323995 - 18324154
Alignment:
Q  95 gaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgtta 194  Q
    |||||||||||||||||||  ||||| ||||||   |||| ||||||||| | |||||| |||||||||| |||||||||  ||| |||||||||| |||    
T  18323995 gaagattagtcactttagtcgctgaacaggaaat--gtcgtcattttagttcatgaatgcagataaattgtaaaatagtccctgaatgtagactttatta 18324092  T
Q  195 gtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    ||||||||| | |||||||||| | ||||||||| |||||||||| | ||| ||||||||||    
T  18324093 gtcaatttagttcctgaatgcaaactccgttagtcaatttagtccttaaatgtagactccgt 18324154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 240
Target Start/End: Original strand, 21124325 - 21124468
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||| | ||||||| |||||||||||||| || || || ||||||| ||||||  ||||||||||||||||||||  | | |||||||| | |||||    
T  21124325 agattagccgctttagtccctgaataggaaaggagacgtcactttagtctctgaatacagataaattgcaaaatagtctctaaatgtagactctattagt 21124424  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccc 240  Q
    ||||||| |||||||||||||| | ||||||| |||||||||||    
T  21124425 caatttagtccctgaatgcagacttcgttagtcaatttagtccc 21124468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 245
Target Start/End: Original strand, 22426842 - 22426992
Alignment:
Q  94 ggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgtt 193  Q
    |||||||||||||||||||| |||||||||||||  ||||  || |||||||| ||||||  |||||||||||||||||||  ||| ||||| || ||||    
T  22426842 ggaagattagtcactttagtccctgaataggaaacgagtcatcactttagtccatgaatgc-gataaattgcaaaatagtccctgaatgtagtctctgtt 22426940  T
Q  194 agtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaat 245  Q
    |||||||||| |||||||||| ||  ||  ||||| ||||| ||||||||||    
T  22426941 agtcaatttagtccctgaatgtagtctcttttagtcaatttggtccctgaat 22426992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 218
Target Start/End: Complemental strand, 41358963 - 41358842
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||| | || ||| || |||||||||| | ||||| ||| |||||||||||||||||||||||||||  ||| |||||||| ||||| |    
T  41358963 agattagtcactttaattcccgaaaagaaaagaagtcgtccttttaatccatgaatgtagataaattgcaaaatagtccctgaatgtagactctgttaat 41358864  T
Q  197 caatttaatccctgaatgcaga 218  Q
    ||||||| ||| ||||||||||    
T  41358863 caatttagtccatgaatgcaga 41358842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 245
Target Start/End: Complemental strand, 22469716 - 22469565
Alignment:
Q  94 ggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgtt 193  Q
    ||||||||||||||||||||   |||||| ||||  ||||| || |||||||| | |||| |||||||||| ||||||||    || |||||| | ||||    
T  22469716 ggaagattagtcactttagtctatgaataagaaatgagtcgtcactttagtccttaaatgcagataaattgtaaaatagttccagaatgtagattctgtt 22469617  T
Q  194 agtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaat 245  Q
    |||||||||||||||||||| || | ||| ||||| ||||||||||||||||    
T  22469616 agtcaatttaatccctgaattcaaactccattagtcaatttagtccctgaat 22469565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 244
Target Start/End: Complemental strand, 12107114 - 12106969
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||||||||||||||  || |||||||||||||||| || |||||||| |||||| ||||||||||||||||| ||  ||| |||||||| ||||| | |    
T  12107114 attagtcactttagtctctaaataggaaagaagtcgtcactttagtccttgaatgcagataaattgcaaaataatccctgaatgtagactctgttaatta 12107015  T
Q  199 atttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    | ||| ||||| |||| ||| | |||| || | |||||||||||||    
T  12107014 aattagtccctaaatgtagactgcgttcgtcactttagtccctgaa 12106969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 253
Target Start/End: Complemental strand, 4289210 - 4289050
Alignment:
Q  93 tggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgt 192  Q
    |||||||||| |||| | ||| | ||||||| |||||||||| |||||||||||  ||||| |||||| ||||||||||||| ||||  | ||||| |||    
T  4289210 tggaagattaatcacgtcagtccttgaatagaaaagaagtcgtcattttagtccacgaatgcagataagttgcaaaatagtctttgaacgcagactatgt 4289111  T
Q  193 tagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    ||||||||||| || || |||||||| |  |||| | |||||||||  ||||| |||||||    
T  4289110 tagtcaatttagtctctaaatgcagactatgttaatcaatttagtctttgaatgtagactc 4289050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 21184299 - 21184434
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||||| |||||||||||||  ||||| || | ||||||| ||||| ||||||||||||||||||||  ||| | || || || |||||||    
T  21184299 attagtcactttagtccctgaataggaaatgagtcgtcactctagtccccgaatgcagataaattgcaaaatagtccctgaatataaac-ttattagtca 21184397  T
Q  199 atttaatccctgaatgcagattccgttagttaattta 235  Q
    ||||| ||||||||| |||| ||||||| | ||||||    
T  21184398 atttagtccctgaatacagactccgttaatcaattta 21184434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 29585663 - 29585576
Alignment:
Q  165 caaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagact 252  Q
    ||||||||||  ||| |||||||||||||| |||||||| |||||||||||||| |  |||||| |||||||||||||||| ||||||    
T  29585663 caaaatagtccctgaatgtagactttgttattcaatttagtccctgaatgcagactttgttagtcaatttagtccctgaatgtagact 29585576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 256
Target Start/End: Complemental strand, 22326695 - 22326528
Alignment:
Q  88 tttattggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagac 187  Q
    |||||||  |||||||||| |||||  ||||||||| | |  || ||||| |||||||| |||||| |||||||||| |||||| || || | | ||||     
T  22326695 tttattgagagattagtca-tttagctcctgaatagaatatgaggcgccactttagtccttgaatgcagataaattgtaaaataatccttaaatatagat 22326597  T
Q  188 tttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    ||||||| |||||||| || ||||||||||||| ||||||   ||||||| ||||||| |||| |||||    
T  22326596 tttgttaatcaatttagtctctgaatgcagatttcgttagcctatttagttcctgaatgtagattccgt 22326528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 37544183 - 37544139
Alignment:
Q  20 gaataattttaatgtaagagtgatgaagataccagaaagcttatg 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  37544183 gaataattttaatgtaagagtgatgaagataccagaaagcttatg 37544139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 12106867 - 12106970
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||||| ||||||| |||||  ||| | || ||||||||||||||| ||| ||||||||||| ||||  ||  |||||||| |||| ||||    
T  12106867 attagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctggatgtagactctgttggtca 12106966  T
Q  199 attt 202  Q
    ||||    
T  12106967 attt 12106970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 21124638 - 21124535
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||||| | |||||  ||||| ||| | || |||| | |||||||||||| ||||||||||| |||| |||| |||||||| |||| ||||    
T  21124638 attagtcactttagttcttgaatgagaaaggagtagtcactttaattcctgaatgtagagaaattgcaaaacagtccttgaatgtagactctgttggtca 21124539  T
Q  199 attt 202  Q
    ||||    
T  21124538 attt 21124535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 22469433 - 22469536
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||| | ||||||| |||||| ||| |||| ||| || |||||||||||| ||||||||||| ||||  ||| || ||||| |||| ||||    
T  22469433 attagtcactttaatccctgaatgggaaaggagtagccactttcgttcctgaatgtagagaaattgcaaaacagtccctgaatgcagactctgttggtca 22469532  T
Q  199 attt 202  Q
    ||||    
T  22469533 attt 22469536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 253
Target Start/End: Complemental strand, 24609294 - 24609151
Alignment:
Q  110 tagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccct 209  Q
    |||| ||| |||||||||| ||||  || |||||| |||||||| | |||||||| ||||||||  |||  |||||  | |||||||||||||| | | |    
T  24609294 tagtccctaaataggaaaggagtcttcactttagttcctgaatgcaaataaattgtaaaatagttcttggatgtaggttctgttagtcaatttagttctt 24609195  T
Q  210 gaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
     |||||||| || |||| ||||||||||| |||||| |||||||    
T  24609194 aaatgcagactctgttaattaatttagtctctgaatgtagactc 24609151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 31253924 - 31253993
Alignment:
Q  88 tttattggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtaga 157  Q
    ||||| ||||||||||||| ||||||  ||||||||||||||||||  || |||||||| ||||||||||    
T  31253924 tttatcggaagattagtcattttagtctctgaataggaaagaagtcatcactttagtccatgaatgtaga 31253993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 23976090 - 23976194
Alignment:
Q  99 attagtcactttagtacctgaataggaaa-gaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtc 197  Q
    ||||||||||||||| | ||||| | ||| ||||| | || |||||| |||||||| ||| ||||||||||| ||||  ||| |||||||| ||||||||    
T  23976090 attagtcactttagtccttgaatggaaaaagaagtagtcactttagttcctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgttagtc 23976189  T
Q  198 aattt 202  Q
    |||||    
T  23976190 aattt 23976194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 31253995 - 31254055
Alignment:
Q  190 tgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatataga 250  Q
    |||||||||||||| |||||||||||||| || |||||| |||||||||||| ||| ||||    
T  31253995 tgttagtcaatttagtccctgaatgcagactctgttagtcaatttagtccctaaatgtaga 31254055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 10289188 - 10289268
Alignment:
Q  90 tattggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagt 173  Q
    ||||||||||||||||| |||| | |   ||||| |||| |||||  ||||||||| |||||| ||||||||||| ||||||||    
T  10289188 tattggaagattagtcaatttattcc---aatagaaaaggagtcgttattttagtctctgaatatagataaattgtaaaatagt 10289268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 25149237 - 25149341
Alignment:
Q  98 gattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtc 197  Q
    ||||||||| |||||| ||||||| | |||  ||| | || |||| |||||||||| | | ||||||||||| ||||  ||| |||||||| |||| |||    
T  25149237 gattagtcattttagtccctgaatggaaaaagagtagtcactttaatccctgaatgcaaagaaattgcaaaacagtccctgaatgtagactctgttggtc 25149336  T
Q  198 aattt 202  Q
    |||||    
T  25149337 aattt 25149341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 37494325 - 37494385
Alignment:
Q  109 ttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaa 169  Q
    ||||| ||||||||||||| |||| | || ||||||||||||||| ||| |||||| ||||    
T  37494325 ttagtccctgaataggaaataagtagtcactttagtccctgaatgcagagaaattgtaaaa 37494385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 1e-49; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 92 - 255
Target Start/End: Original strand, 50335434 - 50335597
Alignment:
Q  92 ttggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttg 191  Q
    |||| ||||||||||||||| | |||||||||||||  ||||| || ||||||||||||||| ||||||||||||||||||||  ||| |||||||||||    
T  50335434 ttgggagattagtcactttaatccctgaataggaaatgagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccatgaatgtagactttg 50335533  T
Q  192 ttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccg 255  Q
    |||||||||||| |||||||||||||| |||||| || |||||||||||||||| |||||||||    
T  50335534 ttagtcaatttagtccctgaatgcagactccgttcgtcaatttagtccctgaatgtagactccg 50335597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 109 - 256
Target Start/End: Original strand, 37607982 - 37608129
Alignment:
Q  109 ttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccc 208  Q
    ||||| |||||||||||||  | | | |||||||||||||||||| | |||||||||||||||||| |||| |||||||| |||||||||||||| |||     
T  37607982 ttagtccctgaataggaaatgaattgtcattttagtccctgaatgcatataaattgcaaaatagtccttgaatgtagactctgttagtcaatttagtcct 37608081  T
Q  209 tgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    |||||||||| || |||||| |||||||||| ||||| ||||||||||    
T  37608082 tgaatgcagactctgttagtcaatttagtccttgaatgtagactccgt 37608129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 13735465 - 13735602
Alignment:
Q  119 aataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcaga 218  Q
    |||||||||||||||| || ||||||||||||||| ||||||||| ||||||||||    | |||||||| |||||||||||||| || |||||||||||    
T  13735465 aataggaaagaagtcgtcactttagtccctgaatgcagataaattacaaaatagtcccacaatgtagactctgttagtcaatttagtctctgaatgcaga 13735564  T
Q  219 ttccgttagttaatttagtccctgaatatagactccgt 256  Q
     ||||||||| |||||||||  | ||| ||||||||||    
T  13735565 ctccgttagtcaatttagtcaataaatgtagactccgt 13735602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 8097989 - 8097840
Alignment:
Q  104 tcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaattta 203  Q
    |||||||||| ||| |||||||||  |||   || ||||||||||||||| ||||||||  ||||||||||  ||| | |||| | ||||||||||||||    
T  8097989 tcactttagtccctaaataggaaatgagttttcactttagtccctgaatgcagataaatcacaaaatagtccatgaatatagattctgttagtcaattta 8097890  T
Q  204 atccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
     ||| ||||| || | ||| ||||| |||||||| ||||||| |||||||    
T  8097889 gtccttgaatacatactccattagtcaatttagttcctgaatgtagactc 8097840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 42847023 - 42847180
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtaga--ctttgtta 194  Q
    ||||||||||||||||| | |||||| ||||||||||  ||||||||||| | |||| |||||||||| |||||| || |||| ||||||   | || ||    
T  42847023 agattagtcactttagtccttgaataagaaagaagtcctcattttagtccataaatgcagataaattgaaaaataatctttgaatgtagattatatgata 42847122  T
Q  195 gtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    ||||||||| |  ||||||||| | | ||||||| |||||||||| | ||| |||||||    
T  42847123 gtcaatttagtatctgaatgcaaact-cgttagtcaatttagtccataaatgtagactc 42847180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 42847297 - 42847198
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||||||||||||||  ||| |||||||| |||| | || |||| |||||||||| ||| ||||||||||| | || |||| ||||||||||||||||||    
T  42847297 attagtcactttagtctctggataggaaaaaagtagtcactttattccctgaatgcagagaaattgcaaaacaatccttgaatgtagactttgttagtca 42847198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 252
Target Start/End: Complemental strand, 32374198 - 32374092
Alignment:
Q  139 tttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtc 238  Q
    |||||||||| |||| | ||||||||||||||||||  ||| ||||       |||||||||||| |||||||||||| | || |||||| |||||||||    
T  32374198 tttagtccctaaatgcaaataaattgcaaaatagtccatgaatgta-------ttagtcaatttagtccctgaatgcaaactctgttagtcaatttagtc 32374106  T
Q  239 cctgaatatagact 252  Q
    ||||||| ||||||    
T  32374105 cctgaatgtagact 32374092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 37608249 - 37608175
Alignment:
Q  100 ttagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtc 174  Q
    |||||||||||||| | ||||| |||||| ||| | |||||||||||||||||| ||| ||||||||||| ||||    
T  37608249 ttagtcactttagtccttgaatgggaaaggagtagtcattttagtccctgaatgcagagaaattgcaaaacagtc 37608175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 11633192 - 11633307
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||| | | |||||||||||||||||| || ||| || | |||| | |||||||||| ||||||||   ||| |||||| | |||||||    
T  11633192 agattagtcactttaatccatgaataggaaagaagtcgtcactttggttcttgaaagcagataaattgtaaaatagttcatgaatgtagattatgttagt 11633291  T
Q  197 caatttaatccctgaa 212  Q
    || |||| ||| ||||    
T  11633292 cactttagtccttgaa 11633307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 32373986 - 32374088
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||||||| |||||| ||||||||||||||| || | || ||||||||||| ||| | | || |||||||| |||  |||| |||||||| |||||||||    
T  32373986 attagtcattttagtccctgaataggaaaga-gtagtcactttagtccctggatgcatagaatttgcaaaacagttcttgaatgtagactgtgttagtca 32374084  T
Q  199 attt 202  Q
    ||||    
T  32374085 attt 32374088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 50335720 - 50335617
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||||| || |||| | ||| |||| | || |||| |||||||||| ||| ||||||||||| ||||  ||| |||||||| |||| ||||    
T  50335720 attagtcactttagtcccagaatggaaaaaaagtagtcactttaatccctgaatgcagacaaattgcaaaacagtccctgaatgtagactctgttggtca 50335621  T
Q  199 attt 202  Q
    ||||    
T  50335620 attt 50335617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 33745188 - 33745237
Alignment:
Q  150 aatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaa 199  Q
    ||||||||||||||| ||||||||||||||||||| ||||  ||||||||    
T  33745188 aatgtagataaattgtaaaatagtcattgattgtacacttaattagtcaa 33745237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 33746852 - 33746901
Alignment:
Q  150 aatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaa 199  Q
    ||||||||||||||| ||||||||||||||||||| ||||  ||||||||    
T  33746852 aatgtagataaattgtaaaatagtcattgattgtacacttaattagtcaa 33746901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 37608075 - 37608149
Alignment:
Q  170 tagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    ||||| |||| || ||||| |||||||||||||| ||| |||||| ||| ||||||||| | ||| |||||||||    
T  37608075 tagtccttgaatgcagactctgttagtcaatttagtccttgaatgtagactccgttagtcactttggtccctgaa 37608149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 33746383 - 33746432
Alignment:
Q  150 aatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaa 199  Q
    |||||||| |||||| ||||||||||||||||||| ||||  ||||||||    
T  33746383 aatgtagaaaaattgtaaaatagtcattgattgtacacttaattagtcaa 33746432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 2e-45; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 48755325 - 48755481
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||||| |||||||||||||| ||||| || ||||||| ||||||| |||||| |||||||||||||  ||| |||||||| |||||||    
T  48755325 agattagtcactttagtccctgaataggaaaggagtcgtcactttagtctctgaatgcagataagttgcaaaatagtccctgaatgtagactctgttagt 48755424  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    ||||||| |||||||||||||| ||||||||| |||||||||| ||||| |||||||    
T  48755425 caatttagtccctgaatgcagactccgttagtcaatttagtccatgaatgtagactc 48755481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 97 - 256
Target Start/End: Original strand, 1426482 - 1426641
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    |||||||||||||||||  ||||||||||||  ||||| || |||||  |||||||| |||||||||||||||||||   ||| |||||| | |||||||    
T  1426482 agattagtcactttagtctctgaataggaaatgagtcgtcactttagatcctgaatgcagataaattgcaaaatagttcctgaatgtagattatgttagt 1426581  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    ||||||| |||||||||||||| ||||||||| |||||||||||| ||| ||||||||||    
T  1426582 caatttagtccctgaatgcagactccgttagtcaatttagtccctaaatgtagactccgt 1426641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 92 - 256
Target Start/End: Original strand, 15031181 - 15031345
Alignment:
Q  92 ttggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttg 191  Q
    |||| ||||||| ||||||||| | ||||| |||||  ||||| || |||||||| |||||| |||||||||| |||||||||  ||| |||||||| ||    
T  15031181 ttgggagattagccactttagtccttgaatgggaaaagagtcgtcactttagtccttgaatgcagataaattgtaaaatagtccctgaatgtagactctg 15031280  T
Q  192 ttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    |||||||||||| |||||||||||| | ||||||||| ||||||||| |||||| ||||||||||    
T  15031281 ttagtcaatttagtccctgaatgcaaactccgttagtcaatttagtcactgaatgtagactccgt 15031345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 244
Target Start/End: Complemental strand, 26498795 - 26498650
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||||||||||||||  ||||||||||||  ||||  || ||||||||||||||| ||||||||||||||||||||  ||| ||||||||  ||||||||    
T  26498795 attagtcactttagtctctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccatgaatgtagactcggttagtca 26498696  T
Q  199 atttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    ||||| || ||||||||| | ||||||||| | |||||||||||||    
T  26498695 atttagtcactgaatgcatactccgttagtcactttagtccctgaa 26498650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 97 - 245
Target Start/End: Original strand, 21514742 - 21514890
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    |||||||||||||||||   ||||||  |||||||||| || ||||||||||||||  |||||||||| ||||||||| |||| |||||||| |||||||    
T  21514742 agattagtcactttagtctttgaatataaaagaagtcgtcactttagtccctgaatacagataaattgtaaaatagtccttgaatgtagactctgttagt 21514841  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaat 245  Q
     |||||| ||||||||||| || | ||||||| |||||||||| |||||    
T  21514842 taatttagtccctgaatgcggacttcgttagtcaatttagtccttgaat 21514890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 92 - 252
Target Start/End: Original strand, 33342999 - 33343158
Alignment:
Q  92 ttggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttg 191  Q
    |||| ||||||||||||||||| ||||||||| |||  ||||| || ||||||||||||||| ||||||||||| |||| |||  ||| |||||||| ||    
T  33342999 ttgggagattagtcactttagtccctgaatagaaaatgagtcgtcactttagtccctgaatgcagataaattgctaaatggtccctgaatgtagactatg 33343098  T
Q  192 ttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagact 252  Q
    |||||||| ||| |||||||||||| | |  |||||| |||||||||||||||| ||||||    
T  33343099 ttagtcaa-ttagtccctgaatgcaaactatgttagtcaatttagtccctgaatgtagact 33343158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 11989293 - 11989167
Alignment:
Q  130 agtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagtt 229  Q
    ||||| |||||||||| ||| ||||||||||||||||||||||||  |  ||||||||| ||||||||||| || |||||||||||||| ||||||| |     
T  11989293 agtcgtcattttagtctctgcatgtagataaattgcaaaatagtctctagttgtagactctgttagtcaatctagtccctgaatgcagactccgttaatc 11989194  T
Q  230 aatttagtccctgaatatagactccgt 256  Q
    |||||||||| | ||| ||||||||||    
T  11989193 aatttagtccttaaatgtagactccgt 11989167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 251
Target Start/End: Complemental strand, 43562881 - 43562727
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    |||||||||| |||||| ||| |||||||||  | ||| |||||||||  ||||||| |||||||||| ||||||||| |||| |||||| | |||| ||    
T  43562881 agattagtcattttagtccctcaataggaaatgattcgtcattttagtttctgaatgcagataaattgtaaaatagtccttgaatgtagattctgtttgt 43562782  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagac 251  Q
    ||||||||||  |||||||||| | | ||||| |||||| ||||||||| |||||    
T  43562781 caatttaatcgttgaatgcagacttcattagtcaatttaatccctgaatgtagac 43562727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 15005025 - 15005104
Alignment:
Q  166 aaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaat 245  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  15005025 aaaatagtccttgaatgtagactctgttagtcaatttaatccctgaatgcagactcagttagttaatttagtccttgaat 15005104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 20759206 - 20759103
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||||||  |||||| |||||||  ||||| ||| | ||||||||||| |||||| ||| |||||||||||||||| |||| ||||||||||||||||||    
T  20759206 attagtcgttttagtccctgaatgagaaaggagtagtcattttagtccttgaatgcagagaaattgcaaaatagtccttgaatgtagactttgttagtca 20759107  T
Q  199 attt 202  Q
    ||||    
T  20759106 attt 20759103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 253
Target Start/End: Complemental strand, 18445684 - 18445530
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||||||||||| || |||||||||||||||| |   || |||||||| |||||| |||||||||||||||||||   ||| |||| ||| |||||||||    
T  18445684 attagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtca 18445585  T
Q  199 atttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    | ||| |  ||||||||||| | ||||| | |||||| |||| |||| |||||||    
T  18445584 acttagtatctgaatgcagacttcgttaatcaatttaatcccagaatttagactc 18445530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 241
Target Start/End: Original strand, 38498132 - 38498277
Alignment:
Q  96 aagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttag 195  Q
    ||||||||||| ||||||  |||||||| |||  |||   || ||||||||||||||| ||||||||||||||||||||  | | | || ||||||||||    
T  38498132 aagattagtcagtttagtctctgaatagaaaatgagtgatcactttagtccctgaatgcagataaattgcaaaatagtccataaatataaactttgttag 38498231  T
Q  196 tcaatttaatccctgaatgcagattccgttagttaatttagtccct 241  Q
    |||||||| |||||||||| ||| ||  ||||| | ||||||||||    
T  38498232 tcaatttagtccctgaatgtagactctattagtcactttagtccct 38498277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 255
Target Start/End: Complemental strand, 14434854 - 14434763
Alignment:
Q  164 gcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccg 255  Q
    |||||||||||  ||| |||||||| |||||||||||||| |||||||||||| | || | |||||||||||||| |||||| |||||||||    
T  14434854 gcaaaatagtccatgaatgtagactctgttagtcaatttagtccctgaatgcaaactcagatagttaatttagtctctgaatgtagactccg 14434763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 245
Target Start/End: Complemental strand, 7300299 - 7300152
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    |||||||| ||||||||  ||||||||||||| |||||  ||||||||||  || || | ||||||| |||||||||     |||||||| | |||||||    
T  7300299 agattagttactttagtctctgaataggaaaggagtcgttattttagtcctcga-tgcacataaattacaaaatagtacgaaattgtagattctgttagt 7300201  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaat 245  Q
    ||||||||||||| |||||||| || |||||| | |||||||| |||||    
T  7300200 caatttaatccctaaatgcagactctgttagtcactttagtccttgaat 7300152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 38498382 - 38498279
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||| | |||||||  ||||| ||| | || ||||||||||||||| | | ||||||||||||||||  ||| |||||||||||||||| |    
T  38498382 attagtcactttaatccctgaatgagaaaggagtagtcactttagtccctgaatgcatagaaattgcaaaatagtctctgaatgtagactttgttagtta 38498283  T
Q  199 attt 202  Q
    ||||    
T  38498282 attt 38498279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 253
Target Start/End: Original strand, 44967859 - 44968009
Alignment:
Q  103 gtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaattt 202  Q
    ||||||||||| | | ||||| |||  ||| | || ||||||||||||||| | ||| |||||||||||||  |||| |||||||| |||||||||||||    
T  44967859 gtcactttagtcctttaatagaaaatgagttgtcactttagtccctgaatgcaaatatattgcaaaatagtttttgaatgtagactctgttagtcaattt 44967958  T
Q  203 aatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    | || || ||| ||||  || ||||| |||||||||  ||||| |||||||    
T  44967959 agtctctcaatacagaccccattagtcaatttagtctttgaatgtagactc 44968009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 253
Target Start/End: Original strand, 26840038 - 26840142
Alignment:
Q  146 cctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaat 245  Q
    |||||||||||||||||| |||||||||| |||| ||||||||    ||||||||||| ||  | | || ||| |||||||||||||||||||| |||||    
T  26840038 cctgaatgtagataaattacaaaatagtctttgaatgtagact---ctagtcaatttagtctttaattgaagactccgttagttaatttagtccttgaat 26840134  T
Q  246 atagactc 253  Q
    ||| ||||    
T  26840135 ataaactc 26840142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 21515023 - 21514920
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||||||||||| || ||||||| |||||  ||| | ||||||||||| |||||||||||||||| ||||| ||||  ||| |||||||| | || ||||    
T  21515023 attagtcacttttgtccctgaattggaaatgagtagtcattttagtccttgaatgtagataaatttcaaaacagtccctgaatgtagactatattggtca 21514924  T
Q  199 attt 202  Q
    ||||    
T  21514923 attt 21514920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 26498548 - 26498651
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||||| ||||||| |||||  ||| | || ||||||||||||||| ||| ||||||||||| ||||  ||| |||||||  |||| ||||    
T  26498548 attagtcactttagtccctgaatgggaaaagagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagaccatgttggtca 26498647  T
Q  199 attt 202  Q
    ||||    
T  26498648 attt 26498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 1426717 - 1426651
Alignment:
Q  136 cattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaattt 202  Q
    ||||||| |||||||||| ||| ||||||||||| ||||| ||| ||||||||||||| ||||||||    
T  1426717 cattttaatccctgaatgcagagaaattgcaaaacagtcactgaatgtagactttgttggtcaattt 1426651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 20758957 - 20759071
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    |||||| |||||||| |  ||||||| |||| |||||| || |||||||| |||||  |||||||||| |||||||||  ||| | |||||| | |||||    
T  20758957 agattaatcactttaatctctgaatatgaaataagtcgtcactttagtccttgaatacagataaattgtaaaatagtctctgaatatagactctattagt 20759056  T
Q  197 caatttaatccctga 211  Q
    ||||||| |||||||    
T  20759057 caatttagtccctga 20759071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 36383085 - 36383151
Alignment:
Q  186 actttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagact 252  Q
    |||||||||||||||||||||| |||||||||| |  ||| || ||||||||| |||||||||||||    
T  36383085 actttgttagtcaatttaatccttgaatgcagactttgttggtcaatttagtctctgaatatagact 36383151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 42453041 - 42453147
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||| | | ||||||| |||  ||||| || |||||||  |||||| | ||||||||||||||||||  | | |||||||| |||||||    
T  42453041 agattagtcactttaatccttgaatagaaaatgagtcgtcactttagtctatgaatgcaaataaattgcaaaatagtccctaaatgtagactctgttagt 42453140  T
Q  197 caattta 203  Q
    |||||||    
T  42453141 caattta 42453147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 15031312 - 15031377
Alignment:
Q  191 gttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    ||||||||||||| || ||||||| ||| ||||||||| ||||||||| |||||| ||||||||||    
T  15031312 gttagtcaatttagtcactgaatgtagactccgttagtcaatttagtcactgaatgtagactccgt 15031377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 39541672 - 39541749
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtc 174  Q
    ||||||||| |||||||  ||||||||||||  ||||| || ||||||| ||||||| |||||||||||||| |||||    
T  39541672 agattagtcgctttagtcactgaataggaaatgagtcgtcactttagtctctgaatgcagataaattgcaaagtagtc 39541749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 11989045 - 11989148
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||||||||||| || ||||||  |||||||||| | || ||||||| ||||||| ||| ||||||||||| ||||  ||| | |||||| |||| ||||    
T  11989045 attagtcacttttgtccctgaaagggaaagaagtagtcactttagtctctgaatgcagagaaattgcaaaacagtccctgaatatagactctgttggtca 11989144  T
Q  199 attt 202  Q
    ||||    
T  11989145 attt 11989148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 15031499 - 15031396
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||||| ||||||| |||||  ||| | || ||||||| ||||||| ||| ||||||||||| ||||  | | | ||||||||||| ||||    
T  15031499 attagtcactttagtccctgaatgggaaatgagtagtcactttagtctctgaatgcagagaaattgcaaaacagtccctaaatctagactttgttggtca 15031400  T
Q  199 attt 202  Q
    ||||    
T  15031399 attt 15031396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 15031323 - 15031397
Alignment:
Q  170 tagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    |||||| ||| ||||||||  ||||||||||||| || ||||||| ||| ||||||||| | |||||||||||||    
T  15031323 tagtcactgaatgtagactccgttagtcaatttagtcactgaatgtagactccgttagtcactttagtccctgaa 15031397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 39541872 - 39541786
Alignment:
Q  116 ctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaattt 202  Q
    |||||||| |||||||| | || ||||||||||||||| ||| |||||| |||| ||||  ||| |||||||| |||| ||||||||    
T  39541872 ctgaatagaaaagaagtagtcactttagtccctgaatgcagagaaattgtaaaacagtctctgaatgtagactctgttggtcaattt 39541786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 41984904 - 41985008
Alignment:
Q  98 gattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtc 197  Q
    |||||||||||||||| |||||||| ||||  ||| | || || ||| | |||||| ||| ||||||||||| |||  ||||  ||||||| ||||||||    
T  41984904 gattagtcactttagttcctgaataagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 41985003  T
Q  198 aattt 202  Q
    |||||    
T  41985004 aattt 41985008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 44968087 - 44968031
Alignment:
Q  146 cctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaattt 202  Q
    |||||||||||||||||||||||| ||||  | | ||||||||||||| ||||||||    
T  44968087 cctgaatgtagataaattgcaaaacagtccctaaatgtagactttgttggtcaattt 44968031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 33343283 - 33343180
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||| | ||||||| |||||  ||| | |||||||||  ||||||| ||| ||||||||||| |||| |||| | || ||| |||| ||||    
T  33343283 attagtcactttaatccctgaatgggaaatgagtagacattttagttactgaatgcagagaaattgcaaaacagtccttgaatataaactctgttggtca 33343184  T
Q  199 attt 202  Q
    ||||    
T  33343183 attt 33343180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 18445404 - 18445508
Alignment:
Q  98 gattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtc 197  Q
    |||||||||||||||| |||||||  ||||  ||| | || || ||| | |||||| ||| ||||||||||| |||  ||||  ||||||| ||||||||    
T  18445404 gattagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 18445503  T
Q  198 aattt 202  Q
    |||||    
T  18445504 aattt 18445508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 47200006 - 47199966
Alignment:
Q  159 aaattgcaaaatagtcattgattgtagactttgttagtcaa 199  Q
    ||||| |||||||||||||||| ||| ||||||||||||||    
T  47200006 aaatttcaaaatagtcattgatcgtacactttgttagtcaa 47199966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 9e-45; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 97 - 256
Target Start/End: Complemental strand, 55382837 - 55382678
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||||| | |||||||||||  ||||| || |||| |||||||||| ||||||||||||||||||||  ||| ||||||||||||||||    
T  55382837 agattagtcactttagtccttgaataggaaatgagtcgtcactttaatccctgaatgcagataaattgcaaaatagtctctgaatgtagactttgttagt 55382738  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    ||||||  ||||| |||||||||||||||||| ||||||||||||| || ||||||||||    
T  55382737 caattttgtccctaaatgcagattccgttagtcaatttagtccctggatgtagactccgt 55382678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 99 - 253
Target Start/End: Original strand, 3369965 - 3370119
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||||||| |||||| |||||  ||||||||||| | ||||||||| |||||||  ||||||||||||||||||||||| | |||||||| |||||||||    
T  3369965 attagtcattttagttcctgagcaggaaagaagttgtcattttagttcctgaatccagataaattgcaaaatagtcattaaatgtagactctgttagtca 3370064  T
Q  199 atttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    ||||| |||||||||||||| | ||||||| ||||||||| || ||| |||||||    
T  3370065 atttagtccctgaatgcagacttcgttagtcaatttagtctcttaatgtagactc 3370119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 98 - 252
Target Start/End: Original strand, 5448195 - 5448349
Alignment:
Q  98 gattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtc 197  Q
    |||||||| ||||| | |||||||||||||| ||||  |||||||||||||||||| |||||||||| ||||||| |  ||| |||| ||| ||||||||    
T  5448195 gattagtccctttattccctgaataggaaaggagtcatcattttagtccctgaatgcagataaattgtaaaatagcccctgaatgtaaactctgttagtc 5448294  T
Q  198 aatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagact 252  Q
    |||||| |||||| ||||||| |||||| || |||||||||||||||||||||||    
T  5448295 aatttagtccctggatgcagactccgttggtcaatttagtccctgaatatagact 5448349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 18830831 - 18830698
Alignment:
Q  121 taggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagatt 220  Q
    |||||||||| ||| || ||||||||||||||| |||||||||||||||||||| |||| |||||| | |||||||| ||||| |||||||||||||| |    
T  18830831 taggaaagaaatcgtcactttagtccctgaatgcagataaattgcaaaatagtccttgaatgtagattctgttagtccatttagtccctgaatgcagact 18830732  T
Q  221 ccgttagttaatttagtccctgaatatagactcc 254  Q
     ||||||| |||||||||||||||| ||||||||    
T  18830731 tcgttagtcaatttagtccctgaatgtagactcc 18830698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 97 - 253
Target Start/End: Complemental strand, 10380876 - 10380720
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||||| | ||||||| ||| ||||||  | ||||| ||||||||  ||||||||||||||||||||  | | |||||||| |||||||    
T  10380876 agattagtcactttagtccttgaatagaaaataagtcgtaactttagcccctgaattcagataaattgcaaaatagtctctaaatgtagactctgttagt 10380777  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    |||||||||||||||||||||| | ||||||| |||||||||||| ||| |||||||    
T  10380776 caatttaatccctgaatgcagacttcgttagtcaatttagtccctaaatgtagactc 10380720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 253
Target Start/End: Complemental strand, 30471099 - 30470943
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    |||||||||||||||||  |||||||| |||  ||||| || |||||| ||||||||||||||||||| |||||||||  ||| |||||||| ||||| |    
T  30471099 agattagtcactttagtctctgaatagaaaaagagtcgtcactttagttcctgaatgtagataaattgtaaaatagtccctgaatgtagactatgttaat 30471000  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    ||||||| |||||||||||||| ||||||| | |||||||||  ||||| |||||||    
T  30470999 caatttagtccctgaatgcagactccgttaatcaatttagtcattgaatgtagactc 30470943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 2634305 - 2634150
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||||| | | |||| ||||  ||||  || ||||||| ||||||||||||||||||| ||||||||  ||| |||||||| |||||||    
T  2634305 agattagtcactttagtccttaaataagaaatgagtcttcactttagtcactgaatgtagataaattgctaaatagtctctgaatgtagactctgttagt 2634206  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagact 252  Q
    ||||||| |||||||||||||| || ||| || |||||||||||||||| ||||||    
T  2634205 caatttagtccctgaatgcagactctgttcgtcaatttagtccctgaatgtagact 2634150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 253
Target Start/End: Original strand, 11821743 - 11821877
Alignment:
Q  119 aataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcaga 218  Q
    |||||||||||||||| || |||||||| | |||  |||||||||||||||||||| |||| |||||||| ||||||| |||||| ||||||||||||||    
T  11821743 aataggaaagaagtcgtcactttagtccttaaatacagataaattgcaaaatagtctttgaatgtagactctgttagttaatttagtccctgaatgcaga 11821842  T
Q  219 ttccgttagttaatttagtccctgaatatagactc 253  Q
    || ||||||| |||||||||  ||||| |||||||    
T  11821843 tttcgttagtcaatttagtctatgaatgtagactc 11821877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 97 - 250
Target Start/End: Original strand, 2063144 - 2063297
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||||| |||||| ||||||  ||||| || ||| || | |||||| |||||||||  |||||||||||||| |||| ||| |||||||    
T  2063144 agattagtcactttagtccctgaagaggaaatgagtcggcactttggttcttgaatgcagataaattataaaatagtcattgaatgtaaactatgttagt 2063243  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatataga 250  Q
    ||||||| || ||||||||| | ||||||||| |||||||||||| ||| ||||    
T  2063244 caatttagtctctgaatgcaaactccgttagtcaatttagtccctaaatgtaga 2063297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 1387624 - 1387468
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    |||||||| |||||||| |||||||||||||||| ||  |||||||| ||||||||| |||||||||| |||||| ||  ||| |||||| ||||||  |    
T  1387624 agattagttactttagtccctgaataggaaagaaatcatcattttaggccctgaatgcagataaattgtaaaatattccctgaatgtagattttgttcat 1387525  T
Q  197 caatttaat-ccctgaatgcagattccgttagttaatttagtccctgaatatagact 252  Q
    ||||||| | ||||||||||||| || |||||| ||||||||| |||||| ||||||    
T  1387524 caatttagtcccctgaatgcagactctgttagtcaatttagtcgctgaatgtagact 1387468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 47943729 - 47943574
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    |||||||||  |||||| |||||||||||||  ||||| || |||||||| | |||| ||||||||||||||||||||  ||| ||||||||| ||||||    
T  47943729 agattagtcgttttagtccctgaataggaaatgagtcgtcactttagtccttaaatgcagataaattgcaaaatagtccctgaatgtagacttggttagt 47943630  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagact 252  Q
    ||||||| | | |||||||||   |||||||| |||||| ||||||||| ||||||    
T  47943629 caatttagttcttgaatgcaggaaccgttagtcaatttaatccctgaatgtagact 47943574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 22018131 - 22017984
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||||| ||| |||||||||  ||||| |||||| ||| ||||||| ||||||||||||||||||||  ||| |||||||| |||||||    
T  22018131 agattagtcactttagtccctaaataggaaatgagtcgtcattttcgtctctgaatgcagataaattgcaaaatagtccctgaatgtagactatgttagt 22018032  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    | ||||| || ||||||| | | ||||||| | | |||||||| ||||    
T  22018031 ctatttagtctctgaatgtatactccgttaatcactttagtccttgaa 22017984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 241
Target Start/End: Complemental strand, 37695216 - 37695069
Alignment:
Q  94 ggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgtt 193  Q
    |||||||| ||||||||||| | |||| ||||||  ||||  || |||||||| |||||| ||||||||||||||||| ||  ||| |||||||| ||||    
T  37695216 ggaagattggtcactttagttcatgaaaaggaaatgagtcatcactttagtccttgaatgcagataaattgcaaaataatctctgaatgtagactctgtt 37695117  T
Q  194 agtcaatttaatccctgaatgcagattccgttagttaatttagtccct 241  Q
    |||||||||||||  |||||||||| || |||||| |||||| |||||    
T  37695116 agtcaatttaatcgttgaatgcagactctgttagtcaatttaatccct 37695069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 256
Target Start/End: Original strand, 30378741 - 30378898
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    |||||| ||||||| || ||||| |||||||  ||||  || ||||||||||| ||||| ||||||||||||||||||  ||| || ||||| |||||||    
T  30378741 agattaatcactttggt-cctgattaggaaaagagtcatcactttagtccctggatgtaaataaattgcaaaatagtctctgaatgcagactctgttagt 30378839  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    ||||| | || ||||||||||| || |||||| |||| ||||||||||| ||||||||||    
T  30378840 caattcagtctctgaatgcagactctgttagtcaattcagtccctgaat-tagactccgt 30378898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 253
Target Start/End: Original strand, 9826632 - 9826786
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||||||||||| || |||||||||||||||| |   || |||||||| |||||| |||||||||||||||||||   ||| |||| ||| |||||||||    
T  9826632 attagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtca 9826731  T
Q  199 atttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    | ||| |  ||||||||||| | ||||| | |||||| ||||||||| |||||||    
T  9826732 acttagtatctgaatgcagacttcgttaatcaatttaatccctgaatttagactc 9826786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 252
Target Start/End: Complemental strand, 2232609 - 2232497
Alignment:
Q  139 tttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtc 238  Q
    |||||||||| |||||| |||||||| ||||||||| || | |||||||| |||||||||||||||||||||  || ||| || |||||  |||||||||    
T  2232609 tttagtccctaaatgtaaataaattgtaaaatagtccttcaatgtagactatgttagtcaatttaatccctggttg-agactctgttagccaatttagtc 2232511  T
Q  239 cctgaatatagact 252  Q
    ||||||| ||||||    
T  2232510 cctgaatgtagact 2232497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 37695094 - 37695025
Alignment:
Q  184 agactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    ||||| |||||||||||||||||||| ||||||||  |||||||| ||||||||||||||||||||||||    
T  37695094 agactctgttagtcaatttaatccctaaatgcagaccccgttagtcaatttagtccctgaatatagactc 37695025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 18500597 - 18500752
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||| | ||| ||||||||||| |||| |||||||||| | ||||  | ||| |||| |||||| |  || | |||| ||| | ||||     
T  18500597 agattagtcactttattgcctcaataggaaaga-gtcgtcattttagtctcagaatacaaatagattgaaaaataatttttaaatgtaaactatattagc 18500695  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    |||||||||||||||||| ||| || |||||| |||||||||||||||| |||||||    
T  18500696 caatttaatccctgaatgtagactctgttagtcaatttagtccctgaatttagactc 18500752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 254
Target Start/End: Complemental strand, 18836518 - 18836403
Alignment:
Q  139 tttagtccctgaatgtagataaattgcaaaa-tagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagt 237  Q
    ||||||||||||||| ||| ||||||||||| || ||  |||  ||||||| |||||||| ||||| |||||||||||||| |||||||| | |||||||    
T  18836518 tttagtccctgaatgcagaaaaattgcaaaagtaatccctgaacgtagactctgttagtccatttagtccctgaatgcagactccgttag-tcatttagt 18836420  T
Q  238 ccctgaatatagactcc 254  Q
    |||||||| ||||||||    
T  18836419 ccctgaatgtagactcc 18836403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 10757765 - 10757695
Alignment:
Q  183 tagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    |||||| ||||||  |||||| |||||||||||||| ||||||||| |||||||||||||||| |||||||    
T  10757765 tagactctgttagcgaatttagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagactc 10757695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 10970936 - 10970866
Alignment:
Q  183 tagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    |||||| ||||||  |||||| |||||||||||||| ||||||||| |||||||||||||||| |||||||    
T  10970936 tagactctgttagcgaatttagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagactc 10970866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 47463814 - 47463908
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgtt 193  Q
    ||||||||||||||| |||| || |||||  ||| | || ||||||||||||||| ||||||||||||||| |||| |||| |||||||| ||||    
T  47463814 attagtcactttagtccctggatgggaaatgagtagtcactttagtccctgaatgcagataaattgcaaaacagtctttgaatgtagactctgtt 47463908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 10757570 - 10757671
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||||| |||||||  ||||  ||| | || ||||||||||||||||||||||||||||||| ||||  ||  |||||||| |||| ||||    
T  10757570 attagtcactttagtccctgaatgagaaatgagtagtcactttagtccctgaatgtagataaattgcaaaacagtccatggatgtagactatgttggtca 10757669  T
Q  199 at 200  Q
    ||    
T  10757670 at 10757671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 10970741 - 10970842
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||||| |||||||  ||||  ||| | || ||||||||||||||||||||||||||||||| ||||  ||  |||||||| |||| ||||    
T  10970741 attagtcactttagtccctgaatgagaaatgagtagtcactttagtccctgaatgtagataaattgcaaaacagtccatggatgtagactatgttggtca 10970840  T
Q  199 at 200  Q
    ||    
T  10970841 at 10970842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 3391246 - 3391183
Alignment:
Q  139 tttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaattt 202  Q
    ||||||| ||||||| ||| ||||||||||| | ||||||| ||||||||||||||||||||||    
T  3391246 tttagtctctgaatgcagagaaattgcaaaacaatcattgaatgtagactttgttagtcaattt 3391183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 5324904 - 5324816
Alignment:
Q  157 ataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaat 245  Q
    |||||||| ||||||||   |||||| ||||| |||||||||||||| | | |||||||||| || |||||| |||||||||| |||||    
T  5324904 ataaattgtaaaatagtttctgattgcagactctgttagtcaatttagttcatgaatgcagactctgttagtcaatttagtccttgaat 5324816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 47463976 - 47463916
Alignment:
Q  91 attggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaa 151  Q
    ||||| ||||||||||||||||| |||||||||||||  ||||| || |||||||||||||    
T  47463976 attgggagattagtcactttagttcctgaataggaaatgagtcgtcactttagtccctgaa 47463916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 29908887 - 29909034
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||  | | |||||||||||  ||||| || ||||||| ||| ||| |||||||||||||||||||   ||| || |||||  ||||||    
T  29908887 agattagtcactttgatccttgaataggaaatgagtcgtcactttagtcactggatgcagataaattgcaaaatagttcatgaatgcagactccgttagt 29908986  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    ||||||| ||  |||||| ||| ||| ||| | | |||||| ||||||    
T  29908987 caatttagtcgttgaatgtagagtccattattcactttagttcctgaa 29909034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 8951060 - 8951125
Alignment:
Q  139 tttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaa 204  Q
    ||||||||||||||||| | ||||||||||| |||| |||| ||||||||  ||| ||||||||||    
T  8951060 tttagtccctgaatgtaaagaaattgcaaaacagtctttgaatgtagactcagttggtcaatttaa 8951125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 8951269 - 8951129
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    |||||||| | |||||| | | |||||||||| | ||| ||  ||||| ||||||| ||||||||| | ||||||||   ||| |||||| |||||||||    
T  8951269 agattagttaatttagtccatcaataggaaaggaatcgtcacattagttcctgaatatagataaatggtaaaatagttcctgaatgtagattttgttagt 8951170  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagt 237  Q
    ||||||| | ||| |||| ||| | ||||||| | ||||||    
T  8951169 caatttagttccttaatgtagacttcgttagtcattttagt 8951129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 18830736 - 18830676
Alignment:
Q  184 agactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    |||||| ||||||||||||| |||||||||| ||| ||| ||||| | |||||||||||||    
T  18830736 agacttcgttagtcaatttagtccctgaatgtagactccattagtcactttagtccctgaa 18830676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 22017885 - 22017957
Alignment:
Q  102 agtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtc 174  Q
    |||||||||| | ||||||| |||||| ||| | || ||||||||||||||| ||| ||||||||||| ||||    
T  22017885 agtcactttaatccctgaatgggaaaggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtc 22017957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 1387475 - 1387404
Alignment:
Q  181 tgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagact 252  Q
    |||||||||||||||||| |||| | |||||||||| |  |||||||| |||||||| || |||| ||||||    
T  1387475 tgtagactttgttagtcactttagttcctgaatgcaaaccccgttagtcaatttagttccggaatgtagact 1387404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 5324684 - 5324786
Alignment:
Q  100 ttagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaa 199  Q
    |||||||||||||| |||||||  ||||| ||| | |  ||||| | ||| ||| ||| ||||||||||| |||| |||| |||||||| |||| |||||    
T  5324684 ttagtcactttagtccctgaatgtgaaaggagtagtcgctttagcctctggatgcagagaaattgcaaaacagtctttgaatgtagactctgttggtcaa 5324783  T
Q  200 ttt 202  Q
    |||    
T  5324784 ttt 5324786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 12034425 - 12034483
Alignment:
Q  141 tagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaa 199  Q
    |||||||| ||||||   ||||||||||||||||  |||||||| ||||||||||||||    
T  12034425 tagtccctcaatgtatcaaaattgcaaaatagtctctgattgtatactttgttagtcaa 12034483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 18830564 - 18830677
Alignment:
Q  88 tttattggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagac 187  Q
    |||||||||| ||||||||||||||| |||||||  ||||  ||| | || |||||| |||| ||| ||||||||||| ||| ||||  ||| ||||||     
T  18830564 tttattggaaaattagtcactttagtccctgaatgagaaatgagtagtcactttagt-cctggatgcagataaattgctaaacagtccctgaatgtagat 18830662  T
Q  188 tttgttagtcaattt 202  Q
    | |||| ||||||||    
T  18830663 tctgttggtcaattt 18830677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 37694940 - 37695005
Alignment:
Q  139 tttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaa 204  Q
    ||||||||||||||| ||| ||||||||||| ||||  ||| |||||| | |||| ||||||||||    
T  37694940 tttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagattgtgttggtcaatttaa 37695005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 9826912 - 9826808
Alignment:
Q  98 gattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtc 197  Q
    |||||||||||||||| |||||||  ||||  ||| | || || ||| | |||||| ||| ||||||||||| |||  ||||  ||||||| ||||||||    
T  9826912 gattagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 9826813  T
Q  198 aattt 202  Q
    |||||    
T  9826812 aattt 9826808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 10380757 - 10380697
Alignment:
Q  184 agactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    |||||| ||||||||||||| ||||| |||| ||| || |||||| | |||||||||||||    
T  10380757 agacttcgttagtcaatttagtccctaaatgtagactcagttagtcactttagtccctgaa 10380697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 8e-42; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 98 - 256
Target Start/End: Original strand, 27508576 - 27508733
Alignment:
Q  98 gattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtc 197  Q
    |||||||||||| ||| |||||||||||||  ||||  || ||||||||||||||| ||||||||||||||||||||  ||| |||||||| ||||||||    
T  27508576 gattagtcactt-agtccctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccctgaatgtagactatgttagtc 27508674  T
Q  198 aatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    |||||| |||||||||||||| || |||||| |||||||||||||||| ||||||||||    
T  27508675 aatttagtccctgaatgcagactctgttagtcaatttagtccctgaatgtagactccgt 27508733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 5080388 - 5080231
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||||||||||||||  |||||||||||||||||||  ||||||||||||||||| |||||||||| |||||||||  ||| |||| ||| | |||||||    
T  5080388 attagtcactttagtctctgaataggaaagaagtcgttattttagtccctgaatgcagataaattgtaaaatagtctctgaatgtaaactatattagtca 5080289  T
Q  199 atttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    ||||| |||||||||||||| ||||||| | |||||||| ||||||| ||||||||||    
T  5080288 atttagtccctgaatgcagactccgttaatcaatttagtacctgaatgtagactccgt 5080231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 127 - 256
Target Start/End: Complemental strand, 14197710 - 14197581
Alignment:
Q  127 agaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgtta 226  Q
    |||||||| |||||||| ||||||||| ||||||||||||| ||||||  ||| |||||||| ||||||||||||||||||||||||||||| |||||||    
T  14197710 agaagtcgtcattttagcccctgaatgcagataaattgcaatatagtccctgaatgtagactctgttagtcaatttaatccctgaatgcagactccgtta 14197611  T
Q  227 gttaatttagtccctgaatatagactccgt 256  Q
    || ||||||||| || ||| ||||||||||    
T  14197610 gtcaatttagtctctcaatgtagactccgt 14197581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 92 - 245
Target Start/End: Complemental strand, 38761278 - 38761125
Alignment:
Q  92 ttggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttg 191  Q
    |||| |||||| |||||||||| |||||||||||||  ||||  || ||||||||||||||| ||||||||||||||||||||  ||| |||||||||||    
T  38761278 ttgggagattaatcactttagtccctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccctgaatgtagactttg 38761179  T
Q  192 ttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaat 245  Q
    ||| |||||||| |||  ||||||||| || |||||| ||||||||||||||||    
T  38761178 ttaatcaatttagtcctcgaatgcagactctgttagtcaatttagtccctgaat 38761125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 256
Target Start/End: Complemental strand, 6441583 - 6441466
Alignment:
Q  139 tttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtc 238  Q
    ||||||| ||||||| ||||||||||||||||| ||  ||| ||||||||||||||||||||||| |||||||||||||| || |||||| |||||||||    
T  6441583 tttagtctctgaatgcagataaattgcaaaataatccctgaatgtagactttgttagtcaatttagtccctgaatgcagactctgttagtcaatttagtc 6441484  T
Q  239 cctgaatatagactccgt 256  Q
     || ||| ||||||||||    
T  6441483 tctaaatgtagactccgt 6441466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 97 - 256
Target Start/End: Original strand, 15000643 - 15000803
Alignment:
Q  97 agattagtcactttag-tacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttag 195  Q
    |||||||||||||||| | |||||||||||||| | | | || ||||||||||||||| ||||||||||||||||| ||   || |||||| | ||||||    
T  15000643 agattagtcactttaggtccctgaataggaaaggaattgtcactttagtccctgaatgcagataaattgcaaaatattctcagaatgtagattatgttag 15000742  T
Q  196 tcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    ||| |||| ||| |||||| ||| |||| |||| |||||||||||| ||| ||||||||||    
T  15000743 tcagtttagtccttgaatgaagactccgatagtcaatttagtcccttaatgtagactccgt 15000803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 244
Target Start/End: Complemental strand, 43257519 - 43257366
Alignment:
Q  91 attggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagacttt 190  Q
    ||||| |||| |||||||| | | ||||||||| |||  ||||| || |||| |||||||||| ||||||||||||||||| || |||| | |||||| |    
T  43257519 attgggagatcagtcacttcaatccctgaatagaaaatgagtcgtcactttaatccctgaatgcagataaattgcaaaataatccttgaatatagactct 43257420  T
Q  191 gttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    ||||||||||||| ||||| |||| ||| | ||||||| |||||| ||||||||    
T  43257419 gttagtcaatttagtccctaaatgtagacttcgttagtcaatttactccctgaa 43257366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 99 - 243
Target Start/End: Original strand, 3404458 - 3404601
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||||| | ||||||| |||||| ||| ||||||||| ||| || | |||||||||||||| |||||  ||| |||| ||| |||||||||    
T  3404458 attagtcactttagtccttgaatagaaaagaaatcgtcattttagtacctaaacgcagataaattgcaaagtagtccatgaatgtacactctgttagtca 3404557  T
Q  199 atttaatccctgaatgcagattccgttagttaatttagtccctga 243  Q
    ||||| ||||| |||||||  || |||||| ||||||||||||||    
T  3404558 atttagtccctaaatgcag-ctctgttagtcaatttagtccctga 3404601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 255
Target Start/End: Complemental strand, 37787952 - 37787810
Alignment:
Q  109 ttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccc 208  Q
    ||||| |||||||| ||||  | |||||| ||||||||||||||| |   |||||||||||||||  | || ||||||||||||||||||||||| ||||    
T  37787952 ttagtccctgaataagaaatgaatcgccactttagtccctgaatgca---aaattgcaaaatagttct-gaatgtagactttgttagtcaatttagtccc 37787857  T
Q  209 tgaatgcagattccgttagttaatttagtccctgaatatagactccg 255  Q
    |||||||| | || |||||| |||||||||  ||||| |||||||||    
T  37787856 tgaatgcatactctgttagtcaatttagtcgttgaatgtagactccg 37787810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 255
Target Start/End: Complemental strand, 45013045 - 45012971
Alignment:
Q  181 tgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccg 255  Q
    |||||| |||||||||||||||| |||||||||||||| ||||||||| |||||| || |||||| |||||||||    
T  45013045 tgtagagtttgttagtcaatttagtccctgaatgcagactccgttagtcaatttaatctctgaatgtagactccg 45012971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 5080111 - 5080212
Alignment:
Q  101 tagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaat 200  Q
    ||||||||||||| ||||||| ||||| |||| | || |||||| |||||||| ||| ||| ||||||| |||| |||| |||||||| |||||||||||    
T  5080111 tagtcactttagtccctgaatgggaaaaaagtagtcactttagttcctgaatgcagagaaaatgcaaaacagtctttgaatgtagactctgttagtcaat 5080210  T
Q  201 tt 202  Q
    ||    
T  5080211 tt 5080212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 202
Target Start/End: Original strand, 15272326 - 15272426
Alignment:
Q  102 agtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatt 201  Q
    |||||||||||| | |||||  ||||  ||| | |||||||||||||||||| ||| ||||||||||||||||  ||| ||||||||||||| |||||||    
T  15272326 agtcactttagtccgtgaatgagaaatgagtagtcattttagtccctgaatgcagagaaattgcaaaatagtccctgaatgtagactttgttggtcaatt 15272425  T
Q  202 t 202  Q
    |    
T  15272426 t 15272426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 27508855 - 27508752
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||| | ||||||| | |||| ||| | || ||||||||||||| ||||| ||||||||||| ||||  ||| |||||||| |||||||||    
T  27508855 attagtcactttaatccctgaatggaaaaggagtagtcactttagtccctgaacgtagagaaattgcaaaacagtccctgaatgtagactctgttagtca 27508756  T
Q  199 attt 202  Q
    ||||    
T  27508755 attt 27508752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 36150846 - 36150993
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||||| | | |||||||||  ||||| || || | ||| |||||| ||||||||||||||||| ||  |   |||||||| |||||||    
T  36150846 agattagtcactttagtccataaataggaaatgagtcgtcacttaaatccatgaatgcagataaattgcaaaataatccctagatgtagactctgttagt 36150945  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    ||||||| || ||||||| | | ||||||||| | |||||||| ||||    
T  36150946 caatttagtctctgaatgtaaactccgttagtcattttagtccttgaa 36150993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 45013150 - 45013061
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagact 188  Q
    ||||||||||||||| ||| |||||||||  ||||| || |||||||| |||||| | |||||||||||||||||| |||| | ||||||    
T  45013150 attagtcactttagtcccttaataggaaaagagtcgtcagtttagtccttgaatgcaaataaattgcaaaatagtccttgaatatagact 45013061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 3404735 - 3404634
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||||| ||| ||| | |||  ||| | || ||||| ||||||||| ||| |||||||||||||||| |||| ||||||||  ||||||||    
T  3404735 attagtcactttagttcctaaatggaaaaagagtagtcactttaggccctgaatgcagagaaattgcaaaatagtccttgaatgtagactcggttagtca 3404636  T
Q  199 at 200  Q
    ||    
T  3404635 at 3404634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 14197459 - 14197562
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||| |||||||||| ||| ||| ||||| |||| | || |||||||||| |||| ||| ||||||||||| |||||| || |||||| | |||| ||||    
T  14197459 attaatcactttagttcctcaatgggaaaaaagtagtcactttagtccctaaatgcagagaaattgcaaaacagtcatcgaatgtagattctgttggtca 14197558  T
Q  199 attt 202  Q
    ||||    
T  14197559 attt 14197562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 29934555 - 29934472
Alignment:
Q  90 tattggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagt 173  Q
    |||||| |||||||| |||||||| | || ||||||||  ||||| || ||||||| || || |||||||||||||||||||||    
T  29934555 tattgggagattagttactttagtccttggataggaaaatagtcgtcactttagtctcttaaggtagataaattgcaaaatagt 29934472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 27508693 - 27508753
Alignment:
Q  184 agactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    ||||| |||||||||||||| |||||||||| ||| ||||||||| | |||||||| ||||    
T  27508693 agactctgttagtcaatttagtccctgaatgtagactccgttagtcactttagtccatgaa 27508753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 38761154 - 38761098
Alignment:
Q  184 agactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccc 240  Q
    ||||| |||||||||||||| |||||||||||||| || |||||| | |||||||||    
T  38761154 agactctgttagtcaatttagtccctgaatgcagactctgttagtcactttagtccc 38761098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 38760994 - 38761068
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtc 174  Q
    |||||||| |||||| ||||||| |||||||||| | || |||||| | |||||||||| ||||||||||| ||||    
T  38760994 attagtca-tttagtccctgaatgggaaagaagtagtcactttagttcgtgaatgtagagaaattgcaaaacagtc 38761068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 4617338 - 4617284
Alignment:
Q  152 tgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatc 206  Q
    |||||| ||||||||||||||||  ||| |||||| ||||||| |||||||||||    
T  4617338 tgtagagaaattgcaaaatagtctctgaatgtagattttgttaatcaatttaatc 4617284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 5e-40; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 25089150 - 25089305
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||||| | ||||||||| || |||||||| ||||||| ||||||| ||||||||||||||||||||  ||| |||||||| |||||||    
T  25089150 agattagtcactttagtccatgaataggagaggagtcgccactttagtctctgaatgcagataaattgcaaaatagtccctgaatgtagactctgttagt 25089249  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagact 252  Q
    ||||||| ||  |||||||||| ||| ||||| |||||||||||||||| ||||||    
T  25089250 caatttagtcattgaatgcagactccattagtcaatttagtccctgaatgtagact 25089305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 13536558 - 13536715
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||||| |||||||||||||| || || || |||| | |||||||| ||||||||||||||||||||  ||| |||||||| |||||||    
T  13536558 agattagtcactttagtccctgaataggaaaggagccgtcactttaatgcctgaatgcagataaattgcaaaatagtccctgaatgtagactctgttagt 13536657  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttag-tccctgaatatagactc 253  Q
    ||||||| |||||||||||||| ||||||||| |||||||  |||||||| |||||||    
T  13536658 caatttagtccctgaatgcagactccgttagtcaatttagccccctgaatgtagactc 13536715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 92 - 256
Target Start/End: Complemental strand, 19295567 - 19295403
Alignment:
Q  92 ttggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttg 191  Q
    |||| |||||||||||||||||  |||||||| |||| |||||  | ||||||||||||||| ||||||||| ||||||||||  ||| || ||||| ||    
T  19295567 ttgggagattagtcactttagtctctgaatagaaaaggagtcgttactttagtccctgaatgcagataaattacaaaatagtccctgaatgcagactctg 19295468  T
Q  192 ttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    |||||||||||| |||||||||||||| | | ||||| |||||||||||||||| ||||||||||    
T  19295467 ttagtcaatttagtccctgaatgcagacttcattagtcaatttagtccctgaatgtagactccgt 19295403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 92 - 237
Target Start/End: Complemental strand, 10588157 - 10588012
Alignment:
Q  92 ttggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttg 191  Q
    |||| ||||||||||||||||| |||||||||||||| ||| | || || ||||| |||||| ||||||||||||||||||||  ||| ||||||||||     
T  10588157 ttgggagattagtcactttagtccctgaataggaaaggagttgtcacttaagtccatgaatgcagataaattgcaaaatagtccatgaatgtagacttta 10588058  T
Q  192 ttagtcaatttaatccctgaatgcagattccgttagttaatttagt 237  Q
    |||||||||||| ||| |||||||||| ||||||||| ||||||||    
T  10588057 ttagtcaatttagtccttgaatgcagactccgttagtcaatttagt 10588012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 253
Target Start/End: Complemental strand, 21222746 - 21222590
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgta--gataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    |||||||||||| || |||||||||||||||| ||| || |||||||||||||||||  |||||||||||||||||||  ||| |||| ||| |||||||    
T  21222746 attagtcactttggtccctgaataggaaagaaatcgtcactttagtccctgaatgtatagataaattgcaaaatagtctctgaatgtatactatgttagt 21222647  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    ||| ||| || ||||||||||| | ||||||| |||||||||||||||| |||||||    
T  21222646 caacttagtctctgaatgcagacttcgttagtcaatttagtccctgaatgtagactc 21222590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 92 - 253
Target Start/End: Original strand, 10862006 - 10862167
Alignment:
Q  92 ttggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttg 191  Q
    |||| |||||||||| ||||||  ||||||   |||| ||||| || ||||||||||||||| | || ||||||||  |||||  ||| |||||||| ||    
T  10862006 ttgggagattagtcattttagtctctgaatgtaaaaggagtcgtcactttagtccctgaatgcaaattaattgcaatgtagtccctgaatgtagactctg 10862105  T
Q  192 ttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    |||||||||| |||||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  10862106 ttagtcaattcaatccctgaaggcagactccgttagtcaatttagtccctgaatatagactc 10862167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 252
Target Start/End: Complemental strand, 10672858 - 10672744
Alignment:
Q  137 attttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttag 236  Q
    |||||||||  |||||| |||||||||||||||||||   ||| |||||| ||||||| |||||||| || ||||||||| ||| ||||||| |||||||    
T  10672858 attttagtctttgaatgcagataaattgcaaaatagttcctgaatgtaga-tttgttaatcaatttagtctctgaatgcatatttcgttagtcaatttag 10672760  T
Q  237 tccctgaatatagact 252  Q
    ||||||||| ||||||    
T  10672759 tccctgaatgtagact 10672744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 26705089 - 26705153
Alignment:
Q  192 ttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    |||||||||||| |||||||||||||||| ||||| | ||||||||||||||||||||| |||||    
T  26705089 ttagtcaatttagtccctgaatgcagatttcgttaatcaatttagtccctgaatatagaatccgt 26705153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 26705307 - 26705204
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||||| ||||||| | |||  ||| | || ||||||||||||||||||| ||||||||||| ||||  ||| ||||||| ||||| ||||    
T  26705307 attagtcactttagttcctgaatggaaaaagagtagtcactttagtccctgaatgtagagaaattgcaaaacagtccctgaatgtagacgttgttggtca 26705208  T
Q  199 attt 202  Q
    ||||    
T  26705207 attt 26705204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 28752240 - 28752337
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgtta 194  Q
    ||||||||||||||||| | |||| | ||||||||  | || |||||| |||||||| ||||||||||||||||||||  ||| |||||||| |||||    
T  28752240 agattagtcactttagtccttgaacaagaaagaagatgtcactttagtacctgaatgcagataaattgcaaaatagtccatgaatgtagactctgtta 28752337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 10587887 - 10587990
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||||| | |||||  ||||| ||| | || ||||||||||||||| ||| ||||||||||| ||||  ||| |||||||| ||||  |||    
T  10587887 attagtcactttagtccatgaatgagaaaggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactatgttgttca 10587986  T
Q  199 attt 202  Q
    ||||    
T  10587987 attt 10587990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 243
Target Start/End: Complemental strand, 12651312 - 12651217
Alignment:
Q  148 tgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctga 243  Q
    |||||| ||||||||||| ||||| || |||| | ||||||  ||||||||||||  ||||||||||| || || |||||| ||||||||| ||||    
T  12651312 tgaatgcagataaattgctaaataatctttgaatatagactccgttagtcaatttggtccctgaatgccgactctgttagtcaatttagtctctga 12651217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 19295281 - 19295356
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtc 174  Q
    ||||||||||||||| | |||||||||||| ||| | || |||||||||||||||  || ||||||||||| ||||    
T  19295281 attagtcactttagtccttgaataggaaaggagtagtcactttagtccctgaatgctgagaaattgcaaaacagtc 19295356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 19780531 - 19780590
Alignment:
Q  154 tagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaat 213  Q
    |||||||||||||||||||||  | | || ||| ||| ||||||||||||||||||||||    
T  19780531 tagataaattgcaaaatagtctatcaatgaagattttattagtcaatttaatccctgaat 19780590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 21222465 - 21222568
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||||| |||||||| |||||||  ||||  ||| | || || ||||| |||||| ||| ||||||||||| |||| ||||  ||||||| |||||||||    
T  21222465 attagtaactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtccttgaacgtagactctgttagtca 21222564  T
Q  199 attt 202  Q
    ||||    
T  21222565 attt 21222568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 26705120 - 26705179
Alignment:
Q  191 gttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatataga 250  Q
    |||| |||||||| |||||||||  ||| ||||||||| |||||||||||||||| ||||    
T  26705120 gttaatcaatttagtccctgaatatagaatccgttagtcaatttagtccctgaatgtaga 26705179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 26705152 - 26705205
Alignment:
Q  191 gttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    ||||||||||||| |||||||||| |||  |||||||| | |||||||||||||    
T  26705152 gttagtcaatttagtccctgaatgtagaacccgttagtcactttagtccctgaa 26705205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 19295435 - 19295383
Alignment:
Q  192 ttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    |||||||||||| |||||||||| ||| |||||| || | |||||||||||||    
T  19295435 ttagtcaatttagtccctgaatgtagactccgttggtcactttagtccctgaa 19295383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 8e-39; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 13753510 - 13753353
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||||| ||| |||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||  | | |||||||| ||| |||    
T  13753510 agattagtcactttagtccctaaataggaaagaagtcgtcattttagtctctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtaagt 13753411  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactcc 254  Q
    ||||||| ||| | |||||||| ||||||||| ||||||| |||||||  ||||||||    
T  13753410 caatttagtccttaaatgcagactccgttagtcaatttagcccctgaaagtagactcc 13753353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 256
Target Start/End: Complemental strand, 10760284 - 10760129
Alignment:
Q  101 tagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaat 200  Q
    ||||||||||| | |||||||||||||  || || || ||||||| ||||||| ||||||||||||||||||||  | | |||||||| ||| |||||||    
T  10760284 tagtcactttaatccctgaataggaaatgagccgtcactttagtctctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtaagtcaat 10760185  T
Q  201 ttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    ||| |||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  10760184 ttagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagactccgt 10760129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 136 - 256
Target Start/End: Original strand, 17497033 - 17497152
Alignment:
Q  136 cattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaattta 235  Q
    ||||||||||| ||||||| |||||||||||||||||||  ||| ||||| || |||||||||||||| ||| ||||||||||||| |||||||||||||    
T  17497033 cattttagtccatgaatgt-gataaattgcaaaatagtccgtgaatgtagtctctgttagtcaatttagtccttgaatgcagattctgttagttaattta 17497131  T
Q  236 gtccctgaatatagactccgt 256  Q
    |||||||||| ||||||||||    
T  17497132 gtccctgaatgtagactccgt 17497152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 92 - 253
Target Start/End: Complemental strand, 30100897 - 30100736
Alignment:
Q  92 ttggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttg 191  Q
    ||||||||||||||| |||||| | ||||||| ||| |||| |  |||||||  |||||||||||||||||||||||||||||  ||| || ||||| ||    
T  30100897 ttggaagattagtcattttagtccttgaatagaaaataagttgtaattttaggtcctgaatgtagataaattgcaaaatagtccatgaatgcagactctg 30100798  T
Q  192 ttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    ||| ||| |||| |||||||||||||| ||| ||||| ||| |||||||||||| |||||||    
T  30100797 ttaatcactttagtccctgaatgcagactccattagtcaatatagtccctgaatgtagactc 30100736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 19564940 - 19564779
Alignment:
Q  97 agattagtcactttagtacctg----aataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgt 192  Q
    ||||||||||||||||| |||     |||||||||  ||||| || |||||||| |||||| |||||||||||||||||||  |||| |||| |||| ||    
T  19564940 agattagtcactttagtccctccctaaataggaaatcagtcgtcactttagtccttgaatggagataaattgcaaaatagtttttgaatgtaaacttcgt 19564841  T
Q  193 tagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactcc 254  Q
    ||||||||||| ||| ||| | || | ||||||||| ||||||||| |||||| ||||||||    
T  19564840 tagtcaatttattccttgattccatactccgttagtcaatttagtctctgaatgtagactcc 19564779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 238
Target Start/End: Complemental strand, 31912483 - 31912336
Alignment:
Q  91 attggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagacttt 190  Q
    |||||| ||| ||||||||||||  ||||||||||||||||||| ||||||||||| | |||||| |||||||| |||||| |  |||| |||||| | |    
T  31912483 attggatgatcagtcactttagtttctgaataggaaagaagtcgtcattttagtccataaatgtaaataaattgtaaaataattcttgaatgtagattat 31912384  T
Q  191 gttagtcaatttaatccctgaatgcagattccgttagttaatttagtc 238  Q
    |||  || ||||| ||| ||||| |||| ||||||||| |||||||||    
T  31912383 gttgatcgatttagtccttgaatacagactccgttagtcaatttagtc 31912336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 253
Target Start/End: Original strand, 19491673 - 19491826
Alignment:
Q  100 ttagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaa 199  Q
    ||||||||||| || |||||||||||||||| |   || |||||||  |||||| |||||||||||||||||||   ||| |||| ||| ||||||||||    
T  19491673 ttagtcactttggtccctgaataggaaagaaattatcactttagtctatgaatgcagataaattgcaaaatagtttatgaatgtatactatgttagtcaa 19491772  T
Q  200 tttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
     ||| |  ||||||||||| | ||||| | |||||||||||||||| |||||||    
T  19491773 cttagtatctgaatgcagacttcgttaatcaatttagtccctgaatttagactc 19491826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 2555437 - 2555584
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||||   |||| |||||||  |||||  | ||||||||||||||  | ||| ||||||||||||||  ||| |||||||| |||||||    
T  2555437 agattagtcactttagcctctgagtaggaaatgagtcgtaactttagtccctgaatacaaatatattgcaaaatagtctctgaatgtagactctgttagt 2555536  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    ||||||| ||  |||||||||| | ||||||| || ||||||||||||    
T  2555537 caatttagtcgttgaatgcagacttcgttagtcaaattagtccctgaa 2555584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 256
Target Start/End: Original strand, 30852584 - 30852736
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||||| | ||||||||||| |||||| || ||||||||||||||  ||||       ||||||||   ||| |||| ||| |||||||    
T  30852584 agattagtcactttagtccttgaataggaaataagtcgtcactttagtccctgaatacagat-------aaaatagttcctgaatgtaaactctgttagt 30852676  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    ||||||| |||||||||||||| | ||| ||| ||||||||| |||||| |||| |||||    
T  30852677 caatttagtccctgaatgcagacttcgtaagtcaatttagtctctgaatgtagattccgt 30852736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 238
Target Start/End: Complemental strand, 21944023 - 21943883
Alignment:
Q  98 gattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtc 197  Q
    ||||| |||||||||| ||||||||| |||  | ||| ||||||||||  |||||| | |||||||||||||||||   ||| |||||||| ||||| ||    
T  21944023 gattaatcactttagtccctgaatagaaaatgaatcgtcattttagtcattgaatgcaaataaattgcaaaatagttcatgaatgtagactctgttaatc 21943924  T
Q  198 aatttaatccctgaatgcagattccgttagttaatttagtc 238  Q
    |||||| |||||||||||| | |  |||||| |||||||||    
T  21943923 aatttagtccctgaatgcatactttgttagtcaatttagtc 21943883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 253
Target Start/End: Original strand, 11297998 - 11298113
Alignment:
Q  139 tttagtccctgaatgta-gataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagt 237  Q
    |||||| |||||||||| |||||||||||||||| ||  |||   |||||| |||||||||||||| || ||||||||||| ||| ||||| ||||||||    
T  11297998 tttagttcctgaatgtaagataaattgcaaaataatccctgaacatagactctgttagtcaatttagtctctgaatgcagactccattagtcaatttagt 11298097  T
Q  238 ccctgaatatagactc 253  Q
     ||||||| |||||||    
T  11298098 tcctgaatgtagactc 11298113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 21211419 - 21211520
Alignment:
Q  101 tagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaat 200  Q
    ||||||||||||| ||||||| |||||  ||| | || ||||||||||||||| ||| ||||||||||| ||||  ||| ||||||||||||| ||||||    
T  21211419 tagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagaaaaattgcaaaacagtctctgaatgtagactttgttggtcaat 21211518  T
Q  201 tt 202  Q
    ||    
T  21211519 tt 21211520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 17497271 - 17497171
Alignment:
Q  102 agtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatt 201  Q
    |||||||||||| | |||||  ||||  ||| | |||||||||||||||||| ||| ||||||||||||||||  ||| ||||||||||||| |||||||    
T  17497271 agtcactttagtccgtgaatgagaaatgagtagtcattttagtccctgaatgcagagaaattgcaaaatagtccctgaatgtagactttgttggtcaatt 17497172  T
Q  202 t 202  Q
    |    
T  17497171 t 17497171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 21943743 - 21943846
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||||| | ||||| |||||  ||| | || |||||| |||||||| ||| ||||||||||| || | |||| ||||||||||||||||||    
T  21943743 attagtcactttagtccttgaatgggaaatgagtagtcactttagtacctgaatgcagagaaattgcaaaacagaccttgaatgtagactttgttagtca 21943842  T
Q  199 attt 202  Q
    ||||    
T  21943843 attt 21943846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 12895585 - 12895666
Alignment:
Q  156 gataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagt 237  Q
    ||||||||  |||||||||   || ||||||||||||||||||||||||||| | |||||||| || |||||| ||||||||    
T  12895585 gataaattaaaaaatagtctccgaatgtagactttgttagtcaatttaatccttaaatgcagactctgttagtcaatttagt 12895666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 20430098 - 20430018
Alignment:
Q  157 ataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagt 237  Q
    |||||||||||||||||  |||| | ||||||  ||||||||||||| | | |||||||||| || |||||||||||||||    
T  20430098 ataaattgcaaaatagtttttgaatatagactccgttagtcaatttagttcatgaatgcagactctgttagttaatttagt 20430018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 253
Target Start/End: Original strand, 34419497 - 34419634
Alignment:
Q  116 ctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgc 215  Q
    |||||||| |||| ||||| || |||| || | ||||| ||||||||||||||||||||  ||| ||||   | |||||||||||||| ||  | || ||    
T  34419497 ctgaatagaaaaggagtcgtcactttaatctcagaatgcagataaattgcaaaatagtccctgaatgtaagttctgttagtcaatttagtcgataaaagc 34419596  T
Q  216 agattccgttagttaatttagtccctgaatatagactc 253  Q
    ||| | ||||||| |||||||||| | ||| |||||||    
T  34419597 agacttcgttagtcaatttagtccttaaatgtagactc 34419634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 19491952 - 19491848
Alignment:
Q  98 gattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtc 197  Q
    |||||||||||||||| |||||||  ||||  ||| | || || ||||| |||||| ||| ||||||||||| |||  ||||  ||||||| ||||||||    
T  19491952 gattagtcactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 19491853  T
Q  198 aattt 202  Q
    |||||    
T  19491852 aattt 19491848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 10760008 - 10760111
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||||||||||| || ||||| | | |||  ||| |||| |||||| |||||||||||| |||||| |||| ||||  ||| |||| |||||||| ||||    
T  10760008 attagtcactttggtccctgagtggaaaatgagtagccactttagttcctgaatgtagagaaattgaaaaacagtccctgaatgtaaactttgttggtca 10760107  T
Q  199 attt 202  Q
    ||||    
T  10760108 attt 10760111  T

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Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 174
Target Start/End: Complemental strand, 21211638 - 21211603
Alignment:
Q  139 tttagtccctgaatgtagataaattgcaaaatagtc 174  Q
    ||||||||||||||| ||||||||||||||||||||    
T  21211638 tttagtccctgaatgcagataaattgcaaaatagtc 21211603  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 20429878 - 20429980
Alignment:
Q  100 ttagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaa 199  Q
    |||||||||||||| |||||||  ||||| ||| | |  ||||| | ||| ||| ||| ||||||||||| |||| |||| |||||||| |||| |||||    
T  20429878 ttagtcactttagtccctgaatgtgaaaggagtagtcgctttagcctctggatgcagagaaattgcaaaacagtctttgaatgtagactctgttggtcaa 20429977  T
Q  200 ttt 202  Q
    |||    
T  20429978 ttt 20429980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 8e-39; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 39598786 - 39598629
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||||| ||| |||||||||||| |   |||||||||| ||||||| ||||||||||||||||||||  ||| ||||||||||||| ||||    
T  39598786 attagtcactttagtccctcaataggaaagaaattttcattttagtcactgaatgcagataaattgcaaaatagtccctgaatgtagactttgttggtca 39598687  T
Q  199 atttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    ||||| || ||||||| | | ||||||||| |||||||||||||||| ||||||||||    
T  39598686 atttagtcgctgaatgtatactccgttagtcaatttagtccctgaatgtagactccgt 39598629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 92 - 256
Target Start/End: Original strand, 31819908 - 31820071
Alignment:
Q  92 ttggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttg 191  Q
    |||| ||||||||||||||||| || ||||||||||| | ||| ||||||||||||| |||| |||||||||| |||||||||| ||| |||||||| ||    
T  31819908 ttgggagattagtcactttagtccc-gaataggaaaggaatcgtcattttagtccctaaatgcagataaattggaaaatagtcactgaatgtagactctg 31820006  T
Q  192 ttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    |||||| ||||| ||| |||||||||| |   ||||| ||||||||| |||||| || |||||||    
T  31820007 ttagtccatttagtccttgaatgcagactttcttagtcaatttagtctctgaatgtatactccgt 31820071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 22092879 - 22093017
Alignment:
Q  118 gaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcag 217  Q
    ||||||||||| ||||| || |||||||| ||| || |||||||||| |||||||||  ||| |||||||| ||||||||| |||| | |||||||||||    
T  22092879 gaataggaaaggagtcgtcactttagtccttgattgcagataaattgtaaaatagtccctgaatgtagactctgttagtcagtttagttcctgaatgcag 22092978  T
Q  218 attccgttagttaatttagtccctgaatatagactccgt 256  Q
    | ||| || || |||||||||||||||||||||||||||    
T  22092979 actccattcgtcaatttagtccctgaatatagactccgt 22093017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 253
Target Start/End: Complemental strand, 24007159 - 24007005
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||||||||||| || | ||| |||||||  |||||  | |||||||| |||||  |||||||||| ||||||| | |||| |||||||| |||||||||    
T  24007159 attagtcactttggtccttgactaggaaatgagtcgttactttagtccttgaatacagataaattgtaaaatagactttgaatgtagactctgttagtca 24007060  T
Q  199 atttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    ||||| ||| |||||||||||||||||  | ||| |||| ||||||| |||||||    
T  24007059 atttagtccatgaatgcagattccgttgatcaatgtagtacctgaatgtagactc 24007005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 32092966 - 32092862
Alignment:
Q  139 tttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtc 238  Q
    ||||||||||||||| |||||||||| |||||||||  ||| |||||||| |||||||||||||| |||||||||| ||| | ||||||| | ||||||     
T  32092966 tttagtccctgaatgcagataaattgaaaaatagtccctgaatgtagactctgttagtcaatttagtccctgaatgtagacttcgttagtcactttagtt 32092867  T
Q  239 cctga 243  Q
    |||||    
T  32092866 cctga 32092862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 31499580 - 31499476
Alignment:
Q  148 tgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatat 247  Q
    ||||||||||||||||| |||||||||  ||| |||||| | ||||||||| |||| |  ||||||||||| ||||||||| |||||||||| ||||| |    
T  31499580 tgaatgtagataaattgtaaaatagtccctgaatgtagaatctgttagtcattttagtttctgaatgcagactccgttagtcaatttagtccttgaatgt 31499481  T
Q  248 agact 252  Q
    |||||    
T  31499480 agact 31499476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 256
Target Start/End: Original strand, 8219198 - 8219296
Alignment:
Q  157 ataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgt 256  Q
    |||||||| ||||||||| |||| |||||||| |||||||||||||| |  ||||||||||| ||||||||| |||||| ||||||||| | ||||||||    
T  8219198 ataaattgtaaaatagtc-ttgaatgtagactctgttagtcaatttagtttctgaatgcagactccgttagtcaatttaatccctgaatgtggactccgt 8219296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 32092759 - 32092860
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||||| ||||||| |||||  ||| | || ||||||||||||||| ||| ||||||||||| ||||  ||| |||||||| |||| ||||    
T  32092759 attagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgtttgtca 32092858  T
Q  199 at 200  Q
    ||    
T  32092859 at 32092860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 17914034 - 17914126
Alignment:
Q  127 agaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagatt 220  Q
    |||||||| ||||||||||| | || | | ||||||||||||||| || |||| |||||| ||||||||||||||||  |||| |||| |||||    
T  17914034 agaagtcgtcattttagtcc-taaacgcaaataaattgcaaaataatccttgaatgtagattttgttagtcaatttagaccctaaatgtagatt 17914126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 202
Target Start/End: Original strand, 24006883 - 24006983
Alignment:
Q  102 agtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatt 201  Q
    ||||||||| ||  |||||| ||||| || | | || ||||||||||||||| ||| ||||||||||| ||||  ||| |||||||| ||||| ||||||    
T  24006883 agtcactttggtttctgaatgggaaaaaattagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgttactcaatt 24006982  T
Q  202 t 202  Q
    |    
T  24006983 t 24006983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 39598662 - 39598612
Alignment:
Q  191 gttagtcaatttaatccctgaatgcagattccgttagttaatttagtccct 241  Q
    ||||||||||||| |||||||||| ||| ||||||||| | ||||||||||    
T  39598662 gttagtcaatttagtccctgaatgtagactccgttagtcactttagtccct 39598612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 22093099 - 22093039
Alignment:
Q  139 tttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaa 199  Q
    ||||||||||||||||||| ||||||||||| ||||  ||| |||||| | |||| |||||    
T  22093099 tttagtccctgaatgtagagaaattgcaaaacagtctctgaatgtagattctgttggtcaa 22093039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 23890 - 24045
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    ||||||||||||||||| ||| |||||||||  ||||| |  |||||||| ||||| ||||||||||||||||| |||   || ||||||||  ||||||    
T  23890 agattagtcactttagttcctaaataggaaatgagtcgtccctttagtccttgaatatagataaattgcaaaatggtccccgaatgtagactacgttagt 23989  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagact 252  Q
    ||||||| |||||||||||||| || ||| || |||||||||| ||||| ||||||    
T  23990 caatttagtccctgaatgcagactctgttggtcaatttagtccttgaatgtagact 24045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 314126 - 314229
Alignment:
Q  147 ctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaata 246  Q
    ||||||| |||| |||||||||||||||  | | |||||||| |||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||     
T  314126 ctgaatgcagattaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtccctgaatgcagactccgttagtcaatttagtccctgaatg 314225  T
Q  247 taga 250  Q
    ||||    
T  314226 taga 314229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 314202 - 314255
Alignment:
Q  191 gttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    ||||||||||||| |||||||||| ||| || |||||| | |||||||||||||    
T  314202 gttagtcaatttagtccctgaatgtagagtctgttagtcactttagtccctgaa 314255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 250
Target Start/End: Original strand, 15363 - 15516
Alignment:
Q  97 agattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagt 196  Q
    |||||||||||||||||   |||||  ||||  ||| | || |||||||| |||||| |||||||||| |||||||||  ||| |||||||| |||||||    
T  15363 agattagtcactttagtctttgaattagaaatgagttgtcactttagtccttgaatgcagataaattgtaaaatagtctctgaatgtagactctgttagt 15462  T
Q  197 caatttaatccctgaatgcagattccgttagttaatttagtccctgaatataga 250  Q
    |||||||||| ||||||| ||| ||||||||  ||||||||| |||||| ||||    
T  15463 caatttaatctctgaatgtagactccgttagccaatttagtctctgaatgtaga 15516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 241
Target Start/End: Original strand, 11599 - 11747
Alignment:
Q  92 ttggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttg 191  Q
    |||| |||||||||||||||||  ||||||||||||  |||||  |||||||| ||| |||| |||||||||| |||||||||  ||| |||||||| ||    
T  11599 ttgggagattagtcactttagtcactgaataggaaatgagtcgttattttagt-cctaaatgcagataaattgtaaaatagtccctgaatgtagactatg 11697  T
Q  192 ttagtcaatttaatccctgaatgcagattccgttagttaatttagtccct 241  Q
    |||| |||||||||| ||||||| | |||| |||||| | ||||||||||    
T  11698 ttaggcaatttaatctctgaatgtatattctgttagtcactttagtccct 11747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 55; Significance: 1e-22; HSPs: 6)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 245
Target Start/End: Complemental strand, 1106 - 1000
Alignment:
Q  139 tttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtc 238  Q
    |||||||| |||||| | ||||||| ||||||||||  |||  ||||||||| ||| |||||||| |||||||||||||||| ||||||| |||||||||    
T  1106 tttagtccttgaatgcaaataaattacaaaatagtccctgaacgtagactttattattcaatttagtccctgaatgcagatttcgttagtcaatttagtc 1007  T
Q  239 cctgaat 245  Q
    |||||||    
T  1006 cctgaat 1000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 245
Target Start/End: Complemental strand, 7570 - 7464
Alignment:
Q  139 tttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtc 238  Q
    |||||||| |||||| | ||||||| ||||||||||  |||  ||||||||| ||| |||||||| |||||||||||||||| ||||||| |||||||||    
T  7570 tttagtccttgaatgcaaataaattacaaaatagtccctgaacgtagactttattattcaatttagtccctgaatgcagatttcgttagtcaatttagtc 7471  T
Q  239 cctgaat 245  Q
    |||||||    
T  7470 cctgaat 7464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 1022 - 961
Alignment:
Q  191 gttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagact 252  Q
    ||||||||||||| |||||||||||||| | ||||||| |||||| ||||||||| ||||||    
T  1022 gttagtcaatttagtccctgaatgcagacttcgttagtcaatttaatccctgaatgtagact 961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 7486 - 7425
Alignment:
Q  191 gttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagact 252  Q
    ||||||||||||| |||||||||||||| | ||||||| |||||| ||||||||| ||||||    
T  7486 gttagtcaatttagtccctgaatgcagacttcgttagtcaatttaatccctgaatgtagact 7425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 997 - 937
Alignment:
Q  184 agactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    |||||| |||||||||||||||||||||||| ||| |  |||||| | |||||||||||||    
T  997 agacttcgttagtcaatttaatccctgaatgtagactttgttagtcactttagtccctgaa 937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 7461 - 7401
Alignment:
Q  184 agactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    |||||| |||||||||||||||||||||||| ||| |  |||||| | |||||||||||||    
T  7461 agacttcgttagtcaatttaatccctgaatgtagactttgttagtcactttagtccctgaa 7401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 253
Target Start/End: Original strand, 57451 - 57603
Alignment:
Q  101 tagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaat 200  Q
    |||||||||| || |||||||||||||||| |   || |||||||| |||||| |||||||||| ||||||||   ||| |||| ||| ||||||||||     
T  57451 tagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgaaaaatagtttctgaatgtatactatgttagtcaac 57550  T
Q  201 ttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    ||| |  ||||||||||| | ||||| | |||||||||||||||| |||||||    
T  57551 ttagtatctgaatgcagacttcgttaatcaatttagtccctgaatttagactc 57603  T

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Target: scaffold0024 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 253
Target Start/End: Original strand, 127804 - 127958
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||||||||||| || |||||||||||||||| |   || |||||||| |||||| |||||||||||||||||||   ||| |||| ||| |||||||||    
T  127804 attagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtca 127903  T
Q  199 atttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    | ||| |  ||||||||||| | ||||| | |||||| |||| |||| |||||||    
T  127904 acttagtatctgaatgcagacttcgttaatcaatttaatcccagaatttagactc 127958  T

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Target: scaffold0024; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 128084 - 127980
Alignment:
Q  98 gattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtc 197  Q
    |||||||||||||||| |||||||  ||||  ||| | || || ||| | |||||| ||| ||||||||||| |||  ||||  ||||||| ||||||||    
T  128084 gattagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 127985  T
Q  198 aattt 202  Q
    |||||    
T  127984 aattt 127980  T

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Target: scaffold1300 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 253
Target Start/End: Original strand, 1357 - 1504
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    ||||||||||||||| | ||||||||||| || |   || |||||||||| |||| ||||||||||||||||||||        || ||| ||||| |||    
T  1357 attagtcactttagtccttgaataggaaataaattatcactttagtccctaaatgcagataaattgcaaaatagtc-------ttatactatgttaatca 1449  T
Q  199 atttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactc 253  Q
    | ||| || ||||||||||| | |||||||||||||||||||||||| |||||||    
T  1450 acttagtctctgaatgcagacttcgttagttaatttagtccctgaatgtagactc 1504  T

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Target: scaffold1300; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 1630 - 1526
Alignment:
Q  98 gattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtc 197  Q
    |||||||||||||||| |||||||  ||||  ||| | || || ||||| |||||| ||| ||||||||||| |||| ||||  ||||||| ||||||||    
T  1630 gattagtcactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtccttgaacgtagactctgttagtc 1531  T
Q  198 aattt 202  Q
    |||||    
T  1530 aattt 1526  T

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Target: scaffold0011 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 190417 - 190315
Alignment:
Q  139 tttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtc 238  Q
    |||| ||||||||||||||||||||||||||||||   | | |  |||||||||||||||||||| | ||||||| |||| || |||||| |||||||||    
T  190417 tttaatccctgaatgtagataaattgcaaaatagtttctaaatacagactttgttagtcaatttagttcctgaatacagactctgttagtcaatttagtc 190318  T
Q  239 cct 241  Q
    |||    
T  190317 cct 190315  T

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Target: scaffold0011; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 190178 - 190281
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 198  Q
    |||||||| |||||| ||||||| |||||  ||| | |||||||||| ||||||| ||| ||||||||||| ||||  ||| |||||||| |||| ||||    
T  190178 attagtcattttagtccctgaatgggaaaagagtagtcattttagtctctgaatgcagagaaattgcaaaacagtctctgaatgtagactctgttggtca 190277  T
Q  199 attt 202  Q
    ||||    
T  190278 attt 190281  T

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Target: scaffold0018 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 72190 - 72115
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtc 174  Q
    ||||||||||||||| ||||||| |||||||||| | || ||||||||||||||||  | ||||||||||| ||||    
T  72190 attagtcactttagtccctgaatgggaaagaagtagtcactttagtccctgaatgtgcagaaattgcaaaacagtc 72115  T

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Target: scaffold0018; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 174
Target Start/End: Original strand, 71902 - 71983
Alignment:
Q  92 ttggaagattagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtc 174  Q
    |||| |||||||| |||||||| ||||| ||||| ||  |||| || |||| |||||||||| ||||||||||||||||||||    
T  71902 ttgggagattagtgactttagt-cctgagtaggataggggtcgtcactttaatccctgaatgcagataaattgcaaaatagtc 71983  T

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Target: scaffold0018; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 71979 - 72013
Alignment:
Q  141 tagtccctgaatgtagataaattgcaaaatagtca 175  Q
    |||||||||||| ||||||||||||||||||||||    
T  71979 tagtccctgaatatagataaattgcaaaatagtca 72013  T

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Target: scaffold0049 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 59855 - 59807
Alignment:
Q  196 tcaatttaatccctgaatgcagattccgttagttaatttagtccctgaa 244  Q
    |||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  59855 tcaatttagtccctgaatgcagactccgttagtcaatttagtccctgaa 59807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 59711 - 59808
Alignment:
Q  105 cactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaattt 202  Q
    ||||||||| ||| ||| ||||||  || | || ||||||||||||||| ||| ||||||||||| || |  ||| |||||||| |||||||||||||    
T  59711 cactttagtccctcaatgggaaaggtgtagtcactttagtccctgaatgcagagaaattgcaaaacagcccctgaatgtagactctgttagtcaattt 59808  T

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Target: scaffold0039 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 27755 - 27682
Alignment:
Q  99 attagtcactttagtacctgaataggaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatag 172  Q
    ||||||||||| ||| ||||| |||||||| ||||| || |||||||  |||||| | ||||||||||||||||    
T  27755 attagtcacttaagtccctgattaggaaagtagtcgtcactttagtctatgaatgcaaataaattgcaaaatag 27682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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