View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14491_low_2 (Length: 394)

Name: NF14491_low_2
Description: NF14491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14491_low_2
NF14491_low_2
[»] chr1 (68 HSPs)
chr1 (18-214)||(611628-611823)
chr1 (11-87)||(21446204-21446280)
chr1 (19-89)||(40596048-40596118)
chr1 (31-89)||(50797787-50797845)
chr1 (18-87)||(33358151-33358220)
chr1 (30-85)||(18336158-18336213)
chr1 (30-85)||(47398456-47398511)
chr1 (30-88)||(8200084-8200142)
chr1 (21-87)||(27687515-27687581)
chr1 (21-87)||(46903479-46903545)
chr1 (9-91)||(48220128-48220209)
chr1 (30-88)||(48325783-48325841)
chr1 (18-79)||(1603011-1603072)
chr1 (16-85)||(16836106-16836175)
chr1 (18-87)||(44517954-44518023)
chr1 (21-85)||(40139126-40139190)
chr1 (18-85)||(34818037-34818104)
chr1 (30-85)||(37690429-37690484)
chr1 (30-85)||(41507199-41507254)
chr1 (9-84)||(50882094-50882168)
chr1 (9-87)||(14983782-14983860)
chr1 (9-87)||(44632538-44632615)
chr1 (21-87)||(49453489-49453555)
chr1 (21-86)||(19427520-19427585)
chr1 (30-87)||(30414873-30414930)
chr1 (21-86)||(43757598-43757663)
chr1 (31-84)||(45065907-45065960)
chr1 (30-87)||(50781574-50781631)
chr1 (30-86)||(49241509-49241565)
chr1 (8-51)||(740938-740981)
chr1 (30-85)||(16252764-16252819)
chr1 (9-88)||(36954668-36954745)
chr1 (21-88)||(37741948-37742015)
chr1 (30-85)||(41197912-41197967)
chr1 (8-87)||(42539416-42539495)
chr1 (30-85)||(50239169-50239224)
chr1 (8-85)||(51718611-51718687)
chr1 (28-86)||(4857921-4857979)
chr1 (30-88)||(11121489-11121547)
chr1 (30-84)||(19969566-19969620)
chr1 (8-86)||(44257517-44257595)
chr1 (20-50)||(45008158-45008188)
chr1 (19-53)||(48325265-48325299)
chr1 (30-84)||(50460717-50460771)
chr1 (21-86)||(2206209-2206274)
chr1 (28-85)||(10675763-10675820)
chr1 (18-55)||(12798589-12798626)
chr1 (18-55)||(12999815-12999852)
chr1 (59-88)||(26159438-26159467)
chr1 (9-62)||(29586028-29586080)
chr1 (18-55)||(30536033-30536070)
chr1 (19-56)||(32821675-32821712)
chr1 (19-88)||(43612074-43612143)
chr1 (30-87)||(45272165-45272222)
chr1 (18-55)||(52437536-52437573)
chr1 (30-82)||(5477168-5477220)
chr1 (59-87)||(8828166-8828194)
chr1 (59-87)||(12657220-12657248)
chr1 (18-82)||(17652643-17652707)
chr1 (58-86)||(19442505-19442533)
chr1 (19-55)||(25988978-25989014)
chr1 (18-62)||(29359673-29359717)
chr1 (21-85)||(31433502-31433566)
chr1 (9-85)||(32319293-32319368)
chr1 (59-87)||(35369698-35369726)
chr1 (9-90)||(38303672-38303753)
chr1 (9-53)||(40328724-40328768)
chr1 (59-91)||(45333564-45333596)
[»] chr3 (58 HSPs)
chr3 (21-85)||(9753230-9753294)
chr3 (30-89)||(50745556-50745615)
chr3 (12-87)||(52564634-52564707)
chr3 (19-86)||(47683800-47683867)
chr3 (9-88)||(49761316-49761394)
chr3 (18-88)||(19148999-19149068)
chr3 (25-87)||(29846891-29846953)
chr3 (30-88)||(49361840-49361898)
chr3 (20-85)||(23868973-23869038)
chr3 (9-86)||(28700471-28700548)
chr3 (8-84)||(53871017-53871091)
chr3 (21-86)||(54007474-54007539)
chr3 (9-87)||(26672410-26672485)
chr3 (30-85)||(29057659-29057714)
chr3 (31-86)||(50146487-50146542)
chr3 (21-87)||(1765402-1765468)
chr3 (30-88)||(3281720-3281778)
chr3 (21-91)||(48893348-48893418)
chr3 (18-55)||(3648621-3648658)
chr3 (30-87)||(43169758-43169815)
chr3 (21-86)||(48490509-48490574)
chr3 (31-87)||(23906993-23907049)
chr3 (21-85)||(26548770-26548834)
chr3 (30-86)||(35368621-35368677)
chr3 (30-85)||(1337843-1337898)
chr3 (34-85)||(24256780-24256830)
chr3 (9-88)||(37035509-37035588)
chr3 (9-88)||(55322700-55322779)
chr3 (9-55)||(622445-622490)
chr3 (9-55)||(6178409-6178455)
chr3 (9-55)||(26452706-26452752)
chr3 (9-55)||(27541486-27541532)
chr3 (19-57)||(28625274-28625312)
chr3 (9-55)||(45711423-45711469)
chr3 (30-88)||(46952946-46953004)
chr3 (9-55)||(50314666-50314712)
chr3 (9-87)||(55361217-55361295)
chr3 (8-85)||(9719435-9719512)
chr3 (9-62)||(19960616-19960669)
chr3 (21-85)||(23553772-23553834)
chr3 (33-86)||(23770750-23770803)
chr3 (18-55)||(29917016-29917053)
chr3 (18-55)||(29966169-29966206)
chr3 (9-62)||(44677468-44677520)
chr3 (60-89)||(45150149-45150178)
chr3 (21-85)||(47484290-47484355)
chr3 (30-87)||(48117345-48117402)
chr3 (9-62)||(48405445-48405498)
chr3 (9-86)||(54195350-54195427)
chr3 (25-85)||(3484770-3484830)
chr3 (8-55)||(10811177-10811222)
chr3 (19-55)||(25959536-25959572)
chr3 (19-55)||(32795871-32795907)
chr3 (18-89)||(35377074-35377146)
chr3 (25-85)||(37780324-37780384)
chr3 (24-56)||(42755695-42755727)
chr3 (21-85)||(45205288-45205352)
chr3 (19-55)||(47276267-47276303)
[»] chr4 (69 HSPs)
chr4 (18-91)||(50980596-50980669)
chr4 (18-82)||(22072263-22072327)
chr4 (21-85)||(37731926-37731990)
chr4 (11-85)||(28899202-28899275)
chr4 (19-86)||(32621637-32621704)
chr4 (9-87)||(28657425-28657502)
chr4 (30-88)||(43769720-43769778)
chr4 (31-87)||(4949516-4949572)
chr4 (30-86)||(26718379-26718435)
chr4 (30-86)||(26731007-26731063)
chr4 (30-86)||(31657657-31657713)
chr4 (9-85)||(50608608-50608683)
chr4 (9-84)||(5386385-5386460)
chr4 (30-85)||(24310526-24310581)
chr4 (19-86)||(26440675-26440742)
chr4 (21-88)||(46686242-46686308)
chr4 (30-84)||(9095949-9096003)
chr4 (9-87)||(18568430-18568508)
chr4 (9-55)||(31559580-31559626)
chr4 (9-55)||(48649560-48649606)
chr4 (30-87)||(1868898-1868955)
chr4 (21-86)||(9827979-9828044)
chr4 (30-87)||(21766556-21766613)
chr4 (19-84)||(28676146-28676211)
chr4 (31-88)||(37022269-37022326)
chr4 (21-86)||(39605978-39606042)
chr4 (9-86)||(42490919-42490996)
chr4 (30-87)||(45678272-45678329)
chr4 (9-62)||(49585029-49585082)
chr4 (48-88)||(21392567-21392607)
chr4 (19-55)||(52456921-52456957)
chr4 (30-85)||(1580288-1580342)
chr4 (25-88)||(4511822-4511885)
chr4 (18-85)||(4974111-4974178)
chr4 (21-88)||(7146127-7146194)
chr4 (18-85)||(12387658-12387725)
chr4 (30-85)||(17683236-17683291)
chr4 (30-85)||(39241306-39241361)
chr4 (48-87)||(46799901-46799940)
chr4 (20-55)||(56557775-56557810)
chr4 (8-86)||(2109442-2109520)
chr4 (31-85)||(32365673-32365727)
chr4 (9-55)||(37297090-37297136)
chr4 (9-55)||(40348835-40348881)
chr4 (9-55)||(44257713-44257759)
chr4 (28-86)||(48494915-48494973)
chr4 (32-82)||(49241970-49242020)
chr4 (34-87)||(5234480-5234533)
chr4 (21-86)||(16214680-16214745)
chr4 (58-91)||(23094370-23094403)
chr4 (30-87)||(31413791-31413848)
chr4 (18-55)||(38792882-38792919)
chr4 (30-87)||(46173548-46173605)
chr4 (19-56)||(48148406-48148443)
chr4 (34-87)||(54036538-54036591)
chr4 (18-62)||(6520824-6520868)
chr4 (9-53)||(7632445-7632489)
chr4 (9-49)||(19232117-19232157)
chr4 (21-53)||(31574935-31574967)
chr4 (18-54)||(36177948-36177984)
chr4 (59-87)||(39158103-39158131)
chr4 (30-86)||(41010174-41010230)
chr4 (48-88)||(47288079-47288119)
chr4 (58-90)||(49449197-49449229)
chr4 (48-88)||(51389313-51389353)
chr4 (9-49)||(51930874-51930914)
chr4 (21-85)||(52851340-52851404)
chr4 (21-57)||(54771505-54771541)
chr4 (23-87)||(55601698-55601762)
[»] chr8 (65 HSPs)
chr8 (9-93)||(39211045-39211129)
chr8 (8-87)||(41639782-41639861)
chr8 (21-90)||(14710889-14710958)
chr8 (20-88)||(29107992-29108060)
chr8 (30-85)||(6243045-6243100)
chr8 (31-86)||(7010684-7010739)
chr8 (19-62)||(33605071-33605114)
chr8 (9-87)||(30439490-30439567)
chr8 (18-87)||(157065-157134)
chr8 (30-85)||(37471654-37471709)
chr8 (33-88)||(40413357-40413412)
chr8 (9-55)||(67144-67190)
chr8 (30-88)||(13924019-13924077)
chr8 (25-87)||(37392128-37392190)
chr8 (30-88)||(41541866-41541924)
chr8 (24-85)||(1370284-1370345)
chr8 (18-82)||(7612987-7613049)
chr8 (36-89)||(9630131-9630184)
chr8 (48-85)||(35153015-35153052)
chr8 (31-88)||(37656998-37657055)
chr8 (36-89)||(41934988-41935041)
chr8 (30-91)||(42569733-42569794)
chr8 (30-87)||(43590703-43590760)
chr8 (21-86)||(45405815-45405880)
chr8 (25-85)||(34247783-34247843)
chr8 (13-89)||(43419875-43419951)
chr8 (21-88)||(7325723-7325790)
chr8 (8-55)||(24616363-24616409)
chr8 (21-88)||(38939185-38939252)
chr8 (8-55)||(42786642-42786689)
chr8 (30-85)||(45081398-45081453)
chr8 (19-85)||(1796496-1796562)
chr8 (9-87)||(5740769-5740847)
chr8 (21-55)||(7678773-7678807)
chr8 (30-87)||(9963694-9963752)
chr8 (18-56)||(24798350-24798388)
chr8 (30-88)||(25430654-25430712)
chr8 (9-55)||(25830229-25830275)
chr8 (9-55)||(28756577-28756623)
chr8 (9-55)||(35067202-35067248)
chr8 (31-85)||(35356173-35356227)
chr8 (31-85)||(41776186-41776240)
chr8 (9-55)||(43715916-43715962)
chr8 (18-55)||(6440123-6440160)
chr8 (59-88)||(10692436-10692465)
chr8 (31-84)||(32954853-32954906)
chr8 (30-87)||(39884493-39884550)
chr8 (18-55)||(43285955-43285992)
chr8 (30-86)||(5502370-5502426)
chr8 (35-83)||(8233506-8233554)
chr8 (21-85)||(16011913-16011977)
chr8 (58-86)||(17775473-17775501)
chr8 (52-88)||(20996185-20996221)
chr8 (18-62)||(21526273-21526317)
chr8 (20-56)||(32501191-32501227)
chr8 (30-62)||(33589234-33589266)
chr8 (48-88)||(33817153-33817193)
chr8 (30-62)||(34018843-34018875)
chr8 (59-87)||(34639529-34639557)
chr8 (9-85)||(34873848-34873924)
chr8 (48-88)||(36023081-36023121)
chr8 (59-87)||(36251323-36251351)
chr8 (21-85)||(37524424-37524488)
chr8 (30-62)||(41521003-41521035)
chr8 (13-53)||(45504605-45504645)
[»] chr7 (50 HSPs)
chr7 (21-87)||(5905961-5906027)
chr7 (25-88)||(2469700-2469763)
chr7 (30-85)||(33465044-33465099)
chr7 (30-89)||(43213315-43213374)
chr7 (18-88)||(3937114-3937184)
chr7 (9-90)||(7817644-7817723)
chr7 (30-87)||(41985105-41985162)
chr7 (18-87)||(41989735-41989803)
chr7 (30-86)||(49142522-49142578)
chr7 (9-88)||(43942646-43942724)
chr7 (9-55)||(18111595-18111641)
chr7 (30-88)||(29923679-29923737)
chr7 (30-88)||(37351995-37352053)
chr7 (9-55)||(40854638-40854684)
chr7 (18-83)||(237026-237091)
chr7 (30-87)||(6822538-6822595)
chr7 (30-87)||(11352978-11353035)
chr7 (30-87)||(22330636-22330693)
chr7 (36-85)||(37848631-37848680)
chr7 (9-89)||(31274524-31274604)
chr7 (31-86)||(3293140-3293195)
chr7 (33-88)||(26749014-26749068)
chr7 (31-86)||(27570354-27570409)
chr7 (30-85)||(27866542-27866597)
chr7 (12-55)||(29855268-29855311)
chr7 (31-86)||(33224834-33224889)
chr7 (30-84)||(3062343-3062397)
chr7 (9-55)||(31675039-31675085)
chr7 (31-85)||(31711942-31711996)
chr7 (22-88)||(31785468-31785534)
chr7 (9-55)||(42584844-42584890)
chr7 (31-88)||(2323301-2323358)
chr7 (25-62)||(7295485-7295522)
chr7 (38-91)||(23848083-23848136)
chr7 (52-89)||(24700117-24700154)
chr7 (48-89)||(31289399-31289440)
chr7 (30-87)||(37856170-37856227)
chr7 (30-87)||(40108133-40108190)
chr7 (9-86)||(45420044-45420121)
chr7 (21-82)||(46094965-46095026)
chr7 (9-86)||(47078235-47078311)
chr7 (18-55)||(47448868-47448905)
chr7 (19-55)||(4678104-4678140)
chr7 (19-55)||(18157179-18157215)
chr7 (30-86)||(24380726-24380782)
chr7 (19-55)||(34108848-34108884)
chr7 (19-55)||(34304672-34304708)
chr7 (19-55)||(38023418-38023454)
chr7 (19-55)||(41798261-41798297)
chr7 (48-88)||(46829476-46829516)
[»] chr2 (60 HSPs)
chr2 (30-90)||(10711731-10711791)
chr2 (21-85)||(24727426-24727490)
chr2 (31-87)||(42607536-42607592)
chr2 (37-88)||(27329121-27329172)
chr2 (9-88)||(40700204-40700283)
chr2 (21-86)||(285465-285530)
chr2 (31-88)||(6646832-6646889)
chr2 (11-88)||(6842543-6842620)
chr2 (18-87)||(33737326-33737395)
chr2 (21-90)||(38724314-38724383)
chr2 (30-86)||(22296134-22296190)
chr2 (30-86)||(22353180-22353236)
chr2 (30-85)||(7121390-7121445)
chr2 (9-88)||(10472131-10472209)
chr2 (30-85)||(37737982-37738036)
chr2 (22-88)||(9432011-9432077)
chr2 (9-55)||(37966625-37966671)
chr2 (34-88)||(43076307-43076361)
chr2 (30-87)||(3012850-3012907)
chr2 (18-87)||(4138178-4138247)
chr2 (18-55)||(5361835-5361872)
chr2 (30-87)||(29795445-29795502)
chr2 (31-88)||(32972912-32972969)
chr2 (9-86)||(42678760-42678836)
chr2 (20-88)||(8482227-8482295)
chr2 (21-85)||(39309977-39310041)
chr2 (16-88)||(39430662-39430734)
chr2 (34-89)||(2971823-2971878)
chr2 (18-53)||(21738608-21738643)
chr2 (18-88)||(4263857-4263926)
chr2 (59-89)||(17388640-17388670)
chr2 (59-89)||(18846610-18846640)
chr2 (30-84)||(23352909-23352963)
chr2 (9-55)||(29449253-29449299)
chr2 (21-63)||(30192347-30192389)
chr2 (30-84)||(32975070-32975124)
chr2 (31-85)||(35792645-35792699)
chr2 (21-87)||(37085217-37085283)
chr2 (30-84)||(38777903-38777957)
chr2 (9-87)||(40937048-40937125)
chr2 (38-87)||(304996-305045)
chr2 (30-87)||(6885485-6885542)
chr2 (18-87)||(7485457-7485526)
chr2 (9-86)||(9647143-9647219)
chr2 (22-87)||(13453779-13453843)
chr2 (30-87)||(13881104-13881161)
chr2 (30-87)||(14021229-14021286)
chr2 (9-86)||(26277106-26277182)
chr2 (31-84)||(33583228-33583280)
chr2 (30-87)||(40115524-40115581)
chr2 (9-82)||(42372494-42372567)
chr2 (21-93)||(1095832-1095904)
chr2 (19-55)||(5167734-5167770)
chr2 (25-85)||(6511556-6511616)
chr2 (19-55)||(8352876-8352912)
chr2 (19-55)||(19668179-19668215)
chr2 (11-55)||(23358565-23358609)
chr2 (13-77)||(34215284-34215348)
chr2 (30-62)||(35589391-35589423)
chr2 (9-85)||(42866762-42866837)
[»] chr6 (38 HSPs)
chr6 (18-84)||(16352153-16352219)
chr6 (20-88)||(2060628-2060696)
chr6 (30-85)||(2163702-2163757)
chr6 (30-85)||(2175335-2175390)
chr6 (30-85)||(32135436-32135491)
chr6 (9-55)||(5570317-5570363)
chr6 (19-85)||(32644623-32644689)
chr6 (37-82)||(11549050-11549095)
chr6 (34-87)||(28748122-28748175)
chr6 (9-82)||(31413539-31413612)
chr6 (18-87)||(16328692-16328763)
chr6 (18-62)||(16337915-16337959)
chr6 (28-87)||(28041816-28041875)
chr6 (30-88)||(2165305-2165363)
chr6 (30-88)||(2176938-2176996)
chr6 (9-55)||(13423010-13423056)
chr6 (25-55)||(34442062-34442092)
chr6 (30-87)||(1196056-1196113)
chr6 (59-88)||(2242067-2242096)
chr6 (30-87)||(5028270-5028327)
chr6 (59-88)||(8505819-8505848)
chr6 (9-62)||(11547513-11547565)
chr6 (31-88)||(12441535-12441592)
chr6 (52-93)||(15368861-15368902)
chr6 (30-87)||(17442831-17442888)
chr6 (9-62)||(17551362-17551415)
chr6 (18-55)||(23653886-23653923)
chr6 (30-87)||(25561945-25562002)
chr6 (30-87)||(25567495-25567552)
chr6 (30-87)||(26101459-26101516)
chr6 (30-62)||(2777320-2777352)
chr6 (19-55)||(11742976-11743012)
chr6 (19-55)||(12044373-12044409)
chr6 (18-62)||(14986737-14986781)
chr6 (18-62)||(16368039-16368083)
chr6 (33-89)||(24437451-24437507)
chr6 (30-87)||(30945821-30945880)
chr6 (19-55)||(34490388-34490424)
[»] chr5 (38 HSPs)
chr5 (30-87)||(32732123-32732180)
chr5 (21-88)||(372716-372783)
chr5 (21-88)||(5007727-5007794)
chr5 (19-86)||(6865781-6865848)
chr5 (9-88)||(34270336-34270414)
chr5 (30-88)||(4434479-4434537)
chr5 (30-80)||(7080546-7080596)
chr5 (30-88)||(12203155-12203213)
chr5 (30-88)||(14206397-14206455)
chr5 (37-87)||(24486894-24486944)
chr5 (30-87)||(3640201-3640258)
chr5 (19-88)||(13734354-13734423)
chr5 (20-85)||(38036712-38036777)
chr5 (30-82)||(1839349-1839401)
chr5 (21-85)||(8442170-8442234)
chr5 (9-88)||(9226310-9226387)
chr5 (32-88)||(14923080-14923135)
chr5 (9-85)||(42267357-42267433)
chr5 (52-87)||(14011315-14011350)
chr5 (9-55)||(22098297-22098343)
chr5 (9-55)||(33037561-33037607)
chr5 (30-88)||(33567228-33567286)
chr5 (9-55)||(40829456-40829502)
chr5 (18-88)||(42509614-42509684)
chr5 (30-87)||(9957206-9957263)
chr5 (30-87)||(11878438-11878495)
chr5 (18-55)||(22649654-22649691)
chr5 (28-57)||(27440518-27440547)
chr5 (59-88)||(35075621-35075650)
chr5 (21-86)||(43153056-43153121)
chr5 (59-87)||(7076613-7076641)
chr5 (30-62)||(8675437-8675469)
chr5 (59-87)||(27546061-27546089)
chr5 (21-85)||(30334762-30334826)
chr5 (48-88)||(31626110-31626150)
chr5 (19-55)||(36624359-36624395)
chr5 (30-86)||(40201125-40201181)
chr5 (18-82)||(41865612-41865676)
[»] scaffold0286 (2 HSPs)
scaffold0286 (30-85)||(18652-18707)
scaffold0286 (30-88)||(17046-17104)
[»] scaffold0054 (1 HSPs)
scaffold0054 (30-87)||(31605-31662)
[»] scaffold0100 (1 HSPs)
scaffold0100 (31-87)||(44784-44840)
[»] scaffold0027 (1 HSPs)
scaffold0027 (18-62)||(121670-121714)
[»] scaffold0276 (1 HSPs)
scaffold0276 (30-87)||(1656-1711)
[»] scaffold0201 (1 HSPs)
scaffold0201 (48-85)||(8472-8509)
[»] scaffold0034 (1 HSPs)
scaffold0034 (58-91)||(22572-22605)
[»] scaffold0257 (1 HSPs)
scaffold0257 (59-91)||(23975-24007)


Alignment Details
Target: chr1 (Bit Score: 124; Significance: 1e-63; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 611628 - 611823
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctttattcactcttatttcccatgaataacatt 117  Q
    |||||||||||  |||||| | |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  611628 aagtaaaaatattatgtgaatttgagagagaaaattatcccaaaatgattgttcaaatatcatttctctttattcactcttatttcccatgaataacatt 611727  T
Q  118 ttttaggcaccttattaacaaaaatatatattctttaggcagttgttaatagnnnnnnnataaaaaccaattgattagtttcatatagaaaaagttg 214  Q
    |||||||||||||||||| ||||| | | |||||||||||||||||||||||       |||||||  |||||||||||||||||||||||||||||    
T  611728 ttttaggcaccttattaa-aaaaaaaaaaattctttaggcagttgttaatagtttttttataaaaaaaaattgattagtttcatatagaaaaagttg 611823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 21446204 - 21446280
Alignment:
Q  11 agagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||| | |||||||| ||||||||||||||||||||| |||| | |||||||||||  ||||||||||||||||    
T  21446204 agagaaggaataaaaatataatgtgagtatgagagagaaagttgtactaaaatgattgtataaatatcatttctctt 21446280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 40596048 - 40596118
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttta 89  Q
    ||||| |||| ||||||||||||||||||||| ||||  ||||||| |||| |||||||||||||||||||    
T  40596048 agtaagaatataatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctcttta 40596118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 50797845 - 50797787
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttta 89  Q
    |||||||||||||||||||| ||||  |||||||||||| |||||||||||||||||||    
T  50797845 atgtgagtatgagagagaaagttgtcacaaaatgattgtacaaatatcatttctcttta 50797787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 33358151 - 33358220
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||| | ||||||||||||||||||||| ||||  |||||||  |||||||||||||||||||||    
T  33358151 aagtaaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 33358220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 18336213 - 18336158
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||||||||| ||||  |||||||| |||||||||||||||||||    
T  18336213 aatgtgagtatgagagagaaagttgtcacaaaatgaatgttcaaatatcatttctc 18336158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 47398456 - 47398511
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||||||||||||||   ||||||| |||||||||||||||||||    
T  47398456 aatgtgagtatgagagagaaaattgtcaaaaaatgaatgttcaaatatcatttctc 47398511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 8200142 - 8200084
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||||||||| ||||  |||||||  ||||||||||||||||||||||    
T  8200142 aatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctcttt 8200084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 27687515 - 27687581
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||| ||||||||||||||||| ||| ||||  ||||||| |||| |||||||||||||||||    
T  27687515 taaaaatataatgtgagtatgagagataaagttgtcacaaaatggttgtacaaatatcatttctctt 27687581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 46903545 - 46903479
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||| | ||||||||||||||||||||| ||||  ||||||| |||| |||||||||||||||||    
T  46903545 taaaaacataatgtgagtatgagagagaaagttgtatcaaaatggttgtacaaatatcatttctctt 46903479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 48220128 - 48220209
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctttatt 91  Q
    |||||||  ||||||||| | ||||||||||||||||||||| ||||  |||||||  |||||||||||||||||||| ||||    
T  48220128 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctgtatt 48220209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 48325783 - 48325841
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||| ||||||||||  ||||||| |||| ||||||||||||||||||    
T  48325783 aatgtgagtatgagatagaaaattgtcacaaaatggttgtacaaatatcatttctcttt 48325841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 1603072 - 1603011
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatca 79  Q
    ||||||||| ||||||||||||||||||||||| |||||  ||||| ||||| |||||||||    
T  1603072 aagtaaaaacacaatgtgagtatgagagagaaagttgttaaaaaataattgtacaaatatca 1603011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 16836106 - 16836175
Alignment:
Q  16 agaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||| |||||| | ||||||||||||||||| ||| ||||  |||||||||||| |||||||||||||||    
T  16836106 agaattaaaaacataatgtgagtatgagagaaaaagttgtcacaaaatgattgtacaaatatcatttctc 16836175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 44517954 - 44518023
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||| | ||||||| ||||||||||||||||||  |||||||||| | ||||||| |||||||||    
T  44517954 aagtaaaaacaaaatgtgaatatgagagagaaaattgtcacaaaatgattatacaaatatgatttctctt 44518023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 40139190 - 40139126
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||| ||||||||||||||||||||| ||||   |||||| |||| |||||||||||||||    
T  40139190 taaaaatataatgtgagtatgagagagaaagttgtcataaaatggttgtacaaatatcatttctc 40139126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 34818037 - 34818104
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||| ||| ||||||||||||||||| |||||   |||||| ||| |||||||||||||||    
T  34818037 aagtaaaaatataatatgagtatgagagagaaagttgttaggaaatgaatgtacaaatatcatttctc 34818104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 37690484 - 37690429
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||||||||||||||   ||| ||||||| |||||||||||||||    
T  37690484 aatgtgagtatgagagagaaaattgtcataaagtgattgtacaaatatcatttctc 37690429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 41507199 - 41507254
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||||||||| ||||  ||||||| |||| |||||||||||||||    
T  41507199 aatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctc 41507254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 50882094 - 50882168
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttct 84  Q
    |||||||  ||||||||| | ||||| | ||||||||||||||||||  |||||||| ||||||||||||||||||    
T  50882094 agagagataaagtaaaaa-ataatgtaaatatgagagagaaaattgtcacaaaatgaatgttcaaatatcatttct 50882168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 14983860 - 14983782
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||  ||||||||| | ||||||| ||||||||||||| |||||  ||| || |||| |||||||||||||||||    
T  14983860 agagagagaaagtaaaaacataatgtgaatatgagagagaaagttgttaaaaagtggttgtacaaatatcatttctctt 14983782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 44632615 - 44632538
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||  ||||||||| | ||||||||||||||||||||| ||||  | |||||  |||||||||||||||||||||    
T  44632615 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcaccaaatggatgttcaaatatcatttctctt 44632538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 49453555 - 49453489
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||| || ||||||||||||||||||||| ||||  |||| || |||| |||||||||||||||||    
T  49453555 taaaagtataatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctctt 49453489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 19427585 - 19427520
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    ||||| || |||||||||||| |||||||| |||| |||||||| ||||  |||||||||||||||    
T  19427585 taaaattataatgtgagtatgtgagagaaagttgtaccaaaatggttgtataaatatcatttctct 19427520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 30414930 - 30414873
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||||||  |||| | |||||| |||| |||||||||||||||||    
T  30414930 aatgtgagtatgagagagaaggttgtacaaaaatggttgtacaaatatcatttctctt 30414873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 43757663 - 43757598
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||| | ||||||||||||| ||||||| ||||  ||||||| |||| ||||||||||||||||    
T  43757663 taaaaacataatgtgagtatgaaagagaaagttgtatcaaaatggttgtacaaatatcatttctct 43757598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 45065907 - 45065960
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttct 84  Q
    |||||||||||||||||||| ||||  |||||||  ||||||||||||||||||    
T  45065907 atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 45065960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 50781574 - 50781631
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||||||| ||||   ||||||  |||||||||||||||||||||    
T  50781574 aatgtgagtatgagagagaaagttgtcataaaatggatgttcaaatatcatttctctt 50781631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 49241509 - 49241565
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    ||||||||||||||||||||| ||||  |||| ||  ||||||||||||||||||||    
T  49241509 aatgtgagtatgagagagaaagttgtcacaaagtggatgttcaaatatcatttctct 49241565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 740938 - 740981
Alignment:
Q  8 gagagagaagaagtaaaaatacaatgtgagtatgagagagaaaa 51  Q
    ||||||||  ||||||||||| ||||||||||||||||||||||    
T  740938 gagagagagaaagtaaaaatataatgtgagtatgagagagaaaa 740981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 16252764 - 16252819
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||| ||||||| |||| | |||||| |||| |||||||||||||||    
T  16252764 aatgtgagtatgaaagagaaagttgtacaaaaatggttgtacaaatatcatttctc 16252819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 36954745 - 36954668
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||  ||||||||| | ||||||||||||||| ||||| ||| || |||||| |||| ||||||||||||||||||    
T  36954745 agagagagaaagtaaaaacataatgtgagtatgagaaagaaagttg-tcaaaaatg-ttgtacaaatatcatttctcttt 36954668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 37741948 - 37742015
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||| | ||||| ||||||| ||||||| ||||  |||||||||||| |||||||||| |||||||    
T  37741948 taaaaacataatgtaagtatgaaagagaaagttgtatcaaaatgattgtacaaatatcatctctcttt 37742015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 41197967 - 41197912
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||||| ||||||||   |||||| || |||||||||||||||||    
T  41197967 aatgtgagtatgagagataaaattgtcataaaatggttattcaaatatcatttctc 41197912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 42539495 - 42539416
Alignment:
Q  8 gagagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||  ||| ||||| | ||||||||| ||||||||||| ||||  || |||| |||| |||||||||||||||||    
T  42539495 gagagagagaaagcaaaaacataatgtgagtctgagagagaaagttgtcacataatggttgtacaaatatcatttctctt 42539416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 50239169 - 50239224
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||||| ||||||||  ||||||| ||||  ||||||||||||||    
T  50239169 aatgtgagtatgagagataaaattgtcacaaaatggttgtcaaaatatcatttctc 50239224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 51718611 - 51718687
Alignment:
Q  8 gagagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt-tccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||  ||||||| | ||||||||||||||||||||| ||||    |||||| ||||||||||||||||||||    
T  51718611 gagagagaag--gtaaaaagataatgtgagtatgagagagaaagttgtgaaaaaaatggttgttcaaatatcatttctc 51718687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 4857979 - 4857921
Alignment:
Q  28 acaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||| | |||||||||||| ||||   ||| ||||||||||||||||||||||||    
T  4857979 acaatgtgtgcatgagagagaaagttgtcaaaaagtgattgttcaaatatcatttctct 4857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 11121547 - 11121489
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||||||||| |||| | ||| |  |||| ||||||||||||||||||    
T  11121547 aatgtgagtatgagagagaaagttgtacaaaagttgttgtacaaatatcatttctcttt 11121489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 19969566 - 19969620
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttct 84  Q
    ||||||||||||||||||||| ||||   ||||||  ||||||||||||||||||    
T  19969566 aatgtgagtatgagagagaaagttgtcataaaatggatgttcaaatatcatttct 19969620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 44257517 - 44257595
Alignment:
Q  8 gagagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    ||||||||| ||||||||| ||| | |   ||||||| ||||| |||||  |||||||| |||||||||||||||||||    
T  44257517 gagagagaaaaagtaaaaacacattttatatatgagaaagaaagttgttagaaaatgatcgttcaaatatcatttctct 44257595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 50
Target Start/End: Original strand, 45008158 - 45008188
Alignment:
Q  20 gtaaaaatacaatgtgagtatgagagagaaa 50  Q
    |||||||||||||||||||||||||||||||    
T  45008158 gtaaaaatacaatgtgagtatgagagagaaa 45008188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 48325299 - 48325265
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaatt 53  Q
    |||||||||| ||||||||||||||||||||||||    
T  48325299 agtaaaaatataatgtgagtatgagagagaaaatt 48325265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 50460717 - 50460771
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttct 84  Q
    ||||||||||||||| ||||| |||| | |||||| |||| ||||||||||||||    
T  50460717 aatgtgagtatgagaaagaaagttgtacaaaaatggttgtacaaatatcatttct 50460771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 2206209 - 2206274
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||| ||| ||||||||| | ||||||||||  |||||| ||||| ||| ||||||||||||    
T  2206209 taaaaatataatatgagtatgaaaaagaaaattgtcacaaaattattgtacaagtatcatttctct 2206274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 10675820 - 10675763
Alignment:
Q  28 acaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||||||| |||| | ||||||||| ||||||  ||||||||||||| ||||||    
T  10675820 acaatgtgagtacgagaaaaaaaattgtttcaaaattgttgttcaaatatcttttctc 10675763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 12798626 - 12798589
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  12798626 aagtaaaaatataatgtgagtatgaaagagaaaattgt 12798589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 12999815 - 12999852
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  12999815 aagtaaaaatataatgtgagtatgagagagaaagttgt 12999852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 26159467 - 26159438
Alignment:
Q  59 aaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||||||||||||||||||    
T  26159467 aaaatgattgttcaaatatcatttctcttt 26159438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 29586080 - 29586028
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa 62  Q
    |||||||  ||||||||| | ||||||||||||||||||||||||||| |||||    
T  29586080 agagagataaagtaaaaa-ataatgtgagtatgagagagaaaattgttgcaaaa 29586028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 30536070 - 30536033
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  30536070 aagtaaaaatataatgtgagtatgagagagaaagttgt 30536033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 32821712 - 32821675
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgtt 56  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  32821712 agtaagaatataatgtgagtatgagagagaaaattgtt 32821675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 43612074 - 43612143
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||| |||| |||||  |||||||||||||| ||||   |||||| |||| ||||||||||||||||||    
T  43612074 agtaagaatataatgtatgtatgagagagaaagttgtcataaaatggttgtacaaatatcatttctcttt 43612143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 45272165 - 45272222
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||||||| ||||   ||| || |||| |||||||||||||||||    
T  45272165 aatgtgagtatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttctctt 45272222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 52437573 - 52437536
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  52437573 aagtaaaaatataatgtgagtatgagagagaaagttgt 52437536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 5477168 - 5477220
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcattt 82  Q
    ||||||||||||||||||||| ||||  |||| || |||| ||||||||||||    
T  5477168 aatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcattt 5477220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 8828166 - 8828194
Alignment:
Q  59 aaaatgattgttcaaatatcatttctctt 87  Q
    |||||||||||||||||||||||||||||    
T  8828166 aaaatgattgttcaaatatcatttctctt 8828194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 12657248 - 12657220
Alignment:
Q  59 aaaatgattgttcaaatatcatttctctt 87  Q
    |||||||||||||||||||||||||||||    
T  12657248 aaaatgattgttcaaatatcatttctctt 12657220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 17652707 - 17652643
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcattt 82  Q
    ||||| ||||| |||||||||||||| |||||| |||||  |||||  |||| ||||||||||||    
T  17652707 aagtataaatataatgtgagtatgagcgagaaagttgttataaaatacttgtacaaatatcattt 17652643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 86
Target Start/End: Complemental strand, 19442533 - 19442505
Alignment:
Q  58 caaaatgattgttcaaatatcatttctct 86  Q
    |||||||||||||||||||||||||||||    
T  19442533 caaaatgattgttcaaatatcatttctct 19442505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 25988978 - 25989014
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  25988978 agtaagaatataatgtgagtatgagagagaaaattgt 25989014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 29359717 - 29359673
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa 62  Q
    ||||||||| | ||||||||||||||||||||| ||||| |||||    
T  29359717 aagtaaaaagataatgtgagtatgagagagaaagttgttacaaaa 29359673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 31433566 - 31433502
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||| | ||||||||||||||||| ||||||||   |||||| |||| ||||||| |||||||    
T  31433566 taaaaacataatgtgagtatgagagaaaaaattgtcgtaaaatggttgtacaaatataatttctc 31433502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 32319293 - 32319368
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||| ||||| |||| | ||||||||||||||||||||| ||||  | |||||  |||| ||||||||||||||    
T  32319293 agagagatgaagtgaaaa-ataatgtgagtatgagagagaaagttgtcaccaaatggatgtttaaatatcatttctc 32319368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 35369726 - 35369698
Alignment:
Q  59 aaaatgattgttcaaatatcatttctctt 87  Q
    |||||||||||||||||||||||||||||    
T  35369726 aaaatgattgttcaaatatcatttctctt 35369698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 38303672 - 38303753
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa--tgattgttcaaatatcatttctctttat 90  Q
    |||||||  ||||||||| | |||| |||||||||||||||| |||||  ||||  |||| |||||||||||||||||||||||    
T  38303672 agagagataaagtaaaaa-ataatgcgagtatgagagagaaagttgttgtaaaagttgat-gttcaaatatcatttctctttat 38303753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 40328724 - 40328768
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaatt 53  Q
    |||||||| ||||||||  | ||||||||||||||||||||||||    
T  40328724 agagagaataagtaaaatcataatgtgagtatgagagagaaaatt 40328768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 91
Target Start/End: Complemental strand, 45333596 - 45333564
Alignment:
Q  59 aaaatgattgttcaaatatcatttctctttatt 91  Q
    |||||||||||||||||||||||||||| ||||    
T  45333596 aaaatgattgttcaaatatcatttctctatatt 45333564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 6e-19; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 9753294 - 9753230
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||    
T  9753294 taaaaacacaatgtgagtatgagagataaaattgtcacaaaatgattgttcaaatatcatttctc 9753230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 50745615 - 50745556
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttta 89  Q
    ||||||||||||||||||||| |||| | ||||||||||| |||||||||||||||||||    
T  50745615 aatgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatatcatttctcttta 50745556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 52564634 - 52564707
Alignment:
Q  12 gagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||| | |||||||||||||||  |||||||||  ||||||| |||| |||||||||||||||||    
T  52564634 gagaagaagtaaaaacataatgtgagtatgaga--gaaaattgtcacaaaatggttgtacaaatatcatttctctt 52564707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 47683867 - 47683800
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    ||||| || ||||||||||||||||||||||| ||||  ||||||| |||| ||||||||||||||||    
T  47683867 agtaagaacacaatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctct 47683800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 49761394 - 49761316
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||  ||||||||| | ||||||||||||||||||||| ||||  |||||||  ||||||||||||||||||||||    
T  49761394 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctcttt 49761316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 19149068 - 19148999
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||| | ||||||||||||||||||||| || |   ||||||||||||||||||||||||||||||    
T  19149068 aagtaaaaagataatgtgagtatgagagagaaagttataa-aaaatgattgttcaaatatcatttctcttt 19148999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 29846891 - 29846953
Alignment:
Q  25 aatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||| ||||||||||||||||||||| |||| | |||||| |||| |||||||||||||||||    
T  29846891 aatataatgtgagtatgagagagaaagttgtacaaaaatggttgtacaaatatcatttctctt 29846953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 49361840 - 49361898
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||||| ||| |||| | ||||||||||| ||||||||||||||||||    
T  49361840 aatgtgagtatgagagaaaaagttgtacaaaaatgattgtacaaatatcatttctcttt 49361898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 23868973 - 23869038
Alignment:
Q  20 gtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||| | ||||||||||||| |||||||||||||  |||||| |||| |||||||||||||||    
T  23868973 gtaaaaaaataatgtgagtatgaaagagaaaattgttataaaatggttgtacaaatatcatttctc 23869038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 28700548 - 28700471
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||  ||||||||| | ||||||||||||||||| ||| ||||   |||||| |||||||||||||||||||||    
T  28700548 agagagagaaagtaaaaacataatgtgagtatgagagataaagttgtcaaaaaatggttgttcaaatatcatttctct 28700471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 53871017 - 53871091
Alignment:
Q  8 gagagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttct 84  Q
    ||||||||||  ||||||| | ||||||| ||||||||||||||||||   |||||| |||||||||||||||||||    
T  53871017 gagagagaag--gtaaaaacaaaatgtgaatatgagagagaaaattgtcataaaatggttgttcaaatatcatttct 53871091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 54007539 - 54007474
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||| ||||||||||||||||||||||||| | ||||||  ||||  |||||||||||||||    
T  54007539 taaaaataaaatgtgagtatgagagagaaaattgctacaaaatagttgtagaaatatcatttctct 54007474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 26672485 - 26672410
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||  |||||||||||  |||||||||||||||||||  ||||  |||||||| |||||||||||||||||||||    
T  26672485 agagagataaagtaaaaata--atgtgagtatgagagagaag-ttgtcacaaaatgaatgttcaaatatcatttctctt 26672410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 29057714 - 29057659
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||||||||| |||| | |||||| |||| |||||||||||||||    
T  29057714 aatgtgagtatgagagagaaagttgtacaaaaatggttgtacaaatatcatttctc 29057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 50146542 - 50146487
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||| ||||||||||||||||||||  |||||||||| | ||||||||||||||||    
T  50146542 atgtaagtatgagagagaaaattgtcacaaaatgattatacaaatatcatttctct 50146487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 1765468 - 1765402
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||| | |||||| |||||||||||||| ||||  |||||||| ||| |||||||||||||||||    
T  1765468 taaaaacataatgtgcgtatgagagagaaagttgtcacaaaatgaatgtacaaatatcatttctctt 1765402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 3281720 - 3281778
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||| ||||||||| ||||  |||||| | ||||||||||||||||||||||    
T  3281720 aatgtgagtataagagagaaagttgtcacaaaataaatgttcaaatatcatttctcttt 3281778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 48893418 - 48893348
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctttatt 91  Q
    |||||| | ||||||||||||||||| ||||||||   ||||||| |||| |||||||||||||| |||||    
T  48893418 taaaaaaataatgtgagtatgagagaaaaaattgtcaaaaaatgaatgtttaaatatcatttctccttatt 48893348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 3648658 - 3648621
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  3648658 aagtaaaaatacaatgtgaatatgagagagaaaattgt 3648621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 43169758 - 43169815
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||| ||| ||||  ||||||| |||| |||||||||||||||||    
T  43169758 aatgtgagtatgagagaaaaagttgtcacaaaatggttgtacaaatatcatttctctt 43169815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 48490509 - 48490574
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||| | ||||||||||||||||||||| |||| | ||| || |||| ||||||||||||||||    
T  48490509 taaaaagataatgtgagtatgagagagaaagttgtacaaaagtggttgtacaaatatcatttctct 48490574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 23906993 - 23907049
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||||||||||||||| ||||  || |||| |||| |||||||||||||||||    
T  23906993 atgtgagtatgagagagaaagttgtaacataatggttgtacaaatatcatttctctt 23907049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 26548770 - 26548834
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||| ||| ||||||||||||||||||||| |||| |||||||  |||| ||||||| |||||||    
T  26548770 taaatatataatgtgagtatgagagagaaagttgtaccaaaatagttgtccaaatattatttctc 26548834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 35368677 - 35368621
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    ||||||||||||||||||||| |||| | |||||  |||| ||||||||||||||||    
T  35368677 aatgtgagtatgagagagaaagttgtacaaaaatagttgtacaaatatcatttctct 35368621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 1337843 - 1337898
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||| ||||||||||   ||||||  |||||||||||||||||||    
T  1337843 aatgtgagtatgagatagaaaattgtcataaaatggatgttcaaatatcatttctc 1337898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 24256780 - 24256830
Alignment:
Q  34 tgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||| ||||||| |||| | |||||||||||||||||||||||||||    
T  24256780 tgagtatgatagagaaatttgt-caaaaatgattgttcaaatatcatttctc 24256830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 37035509 - 37035588
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||  ||||||||| | ||||||||||||| | | ||||||||  ||||||| ||||  |||||||||||||||||    
T  37035509 agagagataaagtaaaaaaataatgtgagtatgaaaaataaaattgtcacaaaatggttgtcaaaatatcatttctcttt 37035588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 55322700 - 55322779
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||  ||||||||| | |||||||||||| |||||||| ||||  ||||||| | || |||||||||||| |||||    
T  55322700 agagagagaaagtaaaaacataatgtgagtatgggagagaaagttgtcacaaaatgctcgtacaaatatcatttatcttt 55322779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 622445 - 622490
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  622445 agagagaagaa-taaaaatataatgtgagtatgagagagaaagttgt 622490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 6178409 - 6178455
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||| | ||||||||||||||||||||||||||    
T  6178409 agagagagaaagtaaaaacataatgtgagtatgagagagaaaattgt 6178455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 26452706 - 26452752
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||||| ||||||||||||||||||||| ||||    
T  26452706 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgt 26452752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 27541486 - 27541532
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||| | ||||||||||||||||||||||||||    
T  27541486 agagagagaaagtaaaaagataatgtgagtatgagagagaaaattgt 27541532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 28625274 - 28625312
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgttc 57  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  28625274 agtaaaaacataatgtgagtatgagagagaaaattgttc 28625312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 45711423 - 45711469
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||| | ||||||||||||||||||||||||||    
T  45711423 agagagagaaagtaaaaagataatgtgagtatgagagagaaaattgt 45711469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 46953004 - 46952946
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||||||||| || |   |||||| |||| ||||||||||||||||||    
T  46953004 aatgtgagtatgagagagaaagttatcaaaaaatggttgtacaaatatcatttctcttt 46952946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 50314712 - 50314666
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||| | ||||||||||||||||||||||||||    
T  50314712 agagagagaaagtaaaaacataatgtgagtatgagagagaaaattgt 50314666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 55361217 - 55361295
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||  ||||||||| | ||||||||||| ||||||||| ||||    ||||| |||| |||||||||||||||||    
T  55361217 agagagagaaagtaaaaaaataatgtgagtataagagagaaagttgtcaagaaatggttgtacaaatatcatttctctt 55361295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 9719435 - 9719512
Alignment:
Q  8 gagagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||  ||||||| | | |||||||||||||||| |||||||||   ||| || |||| |||||||||||||||    
T  9719435 gagagagagaaagtaaagacataatgtgagtatgagagggaaaattgtcaaaaagtggttgtacaaatatcatttctc 9719512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 19960616 - 19960669
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa 62  Q
    |||||||| ||||||||| | ||||| |||||||||||||||| |||| |||||    
T  19960616 agagagaaaaagtaaaaacataatgtaagtatgagagagaaaactgttacaaaa 19960669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 23553772 - 23553834
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||| |||| |||||||||||||||| ||||  |||||   ||||||||||||||||||||    
T  23553772 taaaaatagaatgagagtatgagagagaaagttgtcacaaaa--gttgttcaaatatcatttctc 23553834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 23770750 - 23770803
Alignment:
Q  33 gtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||||||||| ||||||||  ||||||| ||||  |||||||||||||||    
T  23770750 gtgagtatgagagataaaattgtcacaaaatggttgtcaaaatatcatttctct 23770803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 29917016 - 29917053
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  29917016 aagtaaaaatataatgtgagtatgagagagaaagttgt 29917053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 29966169 - 29966206
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  29966169 aagtaaaaatataatgtgagtatgagagagaaagttgt 29966206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 44677468 - 44677520
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa 62  Q
    |||||||  ||||||||| | ||||||||||||||||||||||||||| |||||    
T  44677468 agagagataaagtaaaaa-ataatgtgagtatgagagagaaaattgttgcaaaa 44677520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 45150178 - 45150149
Alignment:
Q  60 aaatgattgttcaaatatcatttctcttta 89  Q
    ||||||||||||||||||||||||||||||    
T  45150178 aaatgattgttcaaatatcatttctcttta 45150149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 47484355 - 47484290
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttc-caaaatgattgttcaaatatcatttctc 85  Q
    |||||| | ||||||||||||||||| |||||||| |  |||||| |||| |||||||||||||||    
T  47484355 taaaaagataatgtgagtatgagagaaaaaattgtacaaaaaatggttgtacaaatatcatttctc 47484290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 48117402 - 48117345
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||| ||||||| |||| | |||||| ||||  ||||||||||||||||    
T  48117402 aatgtgagtatgaaagagaaagttgtacaaaaatggttgtataaatatcatttctctt 48117345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 48405498 - 48405445
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa 62  Q
    |||||||  ||||||||| | ||||||||||||||||||||| ||||| |||||    
T  48405498 agagagagaaagtaaaaacataatgtgagtatgagagagaaagttgttacaaaa 48405445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 54195427 - 54195350
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||  ||||||||| | ||||||||||| | ||||||| ||||  | |||||  ||||||||||||||||||||    
T  54195427 agagagataaagtaaaaaaataatgtgagtataaaagagaaagttgtcactaaatggatgttcaaatatcatttctct 54195350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 3484830 - 3484770
Alignment:
Q  25 aatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||| ||||||||||||||||||||| ||||   |||||| |||  |||||||||||||||    
T  3484830 aatataatgtgagtatgagagagaaagttgtaataaaatggttggacaaatatcatttctc 3484770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 10811222 - 10811177
Alignment:
Q  8 gagagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||||  ||||||| ||||||||||||||||||||||| ||||    
T  10811222 gagagagaag--gtaaaaacacaatgtgagtatgagagagaaagttgt 10811177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 25959536 - 25959572
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  25959536 agtaaaaatataatgtgagtatgagagagaaagttgt 25959572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 32795907 - 32795871
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  32795907 agtaataatataatgtgagtatgagagagaaaattgt 32795871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 35377074 - 35377146
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa-tgattgttcaaatatcatttctcttta 89  Q
    ||||||||| | ||||||||| ||||||||||| ||||  ||||| |  ||||||||||||||||||| ||||    
T  35377074 aagtaaaaacataatgtgagtgtgagagagaaagttgtcacaaaagttgttgttcaaatatcatttcttttta 35377146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 37780384 - 37780324
Alignment:
Q  25 aatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||| |||||||||||||||||||| ||||  ||||||  ||||| |||||| |||||||    
T  37780384 aatacgatgtgagtatgagagagaaagttgtcacaaaattgttgttaaaatattatttctc 37780324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 42755727 - 42755695
Alignment:
Q  24 aaatacaatgtgagtatgagagagaaaattgtt 56  Q
    ||||| |||||||||||||||||||||||||||    
T  42755727 aaatataatgtgagtatgagagagaaaattgtt 42755695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 45205352 - 45205288
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||| ||| | ||||||||||| ||||||||  ||||||  |||| |||||||||||||||    
T  45205352 taaaaatataatttaagtatgagagaaaaaattgtcacaaaatagttgtacaaatatcatttctc 45205288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 47276303 - 47276267
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||||| || |||||||||||||||||||||||    
T  47276303 agtaaaaatataacgtgagtatgagagagaaaattgt 47276267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 50980669 - 50980596
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctttatt 91  Q
    ||||||||||| ||||||||||||||||||||  |||||  ||||||||||| |||||||||||||||| ||||    
T  50980669 aagtaaaaatataatgtgagtatgagagagaaggttgttagaaaatgattgtacaaatatcatttctctatatt 50980596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 22072327 - 22072263
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcattt 82  Q
    ||||||||| ||||||||||||||||||| ||| ||||  |||||||||||||||||||||||||    
T  22072327 aagtaaaaacacaatgtgagtatgagagaaaaagttgtaacaaaatgattgttcaaatatcattt 22072263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 37731990 - 37731926
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||| | ||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  37731990 taaaaacataatgtgagtatgagagagaaagttgtaccaaaatgattgtacaaatatcatttctc 37731926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 28899202 - 28899275
Alignment:
Q  11 agagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||| |||| ||| ||||||| ||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  28899202 agagaagaa-taaatatataatgtgaatatgagagagaaagttgtaccaaaatgattgtacaaatatcatttctc 28899275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 32621704 - 32621637
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||||| ||||||||||| ||||||||| ||||  ||||||| |||| ||||||||||||||||    
T  32621704 agtaaaaatagaatgtgagtattagagagaaagttgtcacaaaatggttgtgcaaatatcatttctct 32621637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 28657425 - 28657502
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||  ||||||||| | ||||||||||||||||||||| ||||  |||||||  |||||||||||||||||||||    
T  28657425 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 28657502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 43769778 - 43769720
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||||||||| ||||  |||||||  ||||||||||||||||||||||    
T  43769778 aatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctcttt 43769720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 4949572 - 4949516
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||||||||||||||| ||||  | |||||| |||||||||||||||||||||    
T  4949572 atgtgagtatgagagagaaagttgtcaccaaatgaatgttcaaatatcatttctctt 4949516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 26718435 - 26718379
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    ||||||||||||||||||||||||||   ||||||  ||||||||||||||||||||    
T  26718435 aatgtgagtatgagagagaaaattgtcataaaatggatgttcaaatatcatttctct 26718379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 26731063 - 26731007
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    ||||||||||||||||||||||||||   ||||||  ||||||||||||||||||||    
T  26731063 aatgtgagtatgagagagaaaattgtcataaaatggatgttcaaatatcatttctct 26731007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 31657713 - 31657657
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    ||||||||||||||||||||| ||||  |||||||  ||||||||||||||||||||    
T  31657713 aatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 31657657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 50608608 - 50608683
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||| |||||||||| | ||||||||||||| ||||||| ||| || ||||| ||||||||||||| |||||||    
T  50608608 agagagaggaagtaaaaaaataatgtgagtatgaaagagaaagttg-tcaaaaataattgttcaaatataatttctc 50608683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 5386460 - 5386385
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttct 84  Q
    |||||||  ||||||||  | ||||||||||||||||||||| ||||   |||||| |||||||||||||||||||    
T  5386460 agagagagaaagtaaaagaataatgtgagtatgagagagaaagttgtcaaaaaatggttgttcaaatatcatttct 5386385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 24310526 - 24310581
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||||||||| |||| | |||||| |||| |||||||||||||||    
T  24310526 aatgtgagtatgagagagaaagttgtacaaaaatggttgtacaaatatcatttctc 24310581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 26440742 - 26440675
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||||| |||||||||||| |||| ||||||||  |||| || |||| ||||||||||||||||    
T  26440742 agtaaaaatataatgtgagtatgggagataaaattgtcacaaagtggttgtacaaatatcatttctct 26440675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 46686308 - 46686242
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||| | ||||||||||||||||||||| |||| | |||||| |||| ||||||||||||||||||    
T  46686308 taaaaacataatgtgagtatgagagagaaagttgtac-aaaatggttgtacaaatatcatttctcttt 46686242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 9096003 - 9095949
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttct 84  Q
    |||||||||||||||||||||||||| | ||||| ||||| |||||| |||||||    
T  9096003 aatgtgagtatgagagagaaaattgtacaaaaataattgtacaaataacatttct 9095949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 18568430 - 18568508
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||| | |||||| || ||| ||||||| ||||||||||||||  |||||| ||| | |||||||||||||||||    
T  18568430 agagagaaaatgtaaaagtataatatgagtataagagagaaaattgtcacaaaataattctacaaatatcatttctctt 18568508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 31559626 - 31559580
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||||    
T  31559626 agagagagaaagtaaaaatataatgtgagtatgagagagaaaattgt 31559580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 48649606 - 48649560
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||||    
T  48649606 agagagaaaaagtaaaaataaaatgcgagtatgagagagaaaattgt 48649560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 1868898 - 1868955
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||| ||||| |||| | |||||| |||| |||||||||||||||||    
T  1868898 aatgtgagtatgagatagaaagttgtacaaaaatggttgtacaaatatcatttctctt 1868955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 9827979 - 9828044
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||| | ||||||||| ||||||||||| |||| | |||||| |||| ||||||||||||||||    
T  9827979 taaaaacataatgtgagtgtgagagagaaagttgtactaaaatggttgtacaaatatcatttctct 9828044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 21766613 - 21766556
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||||||  |||| | ||||||||| | |||||||||||||||||    
T  21766613 aatgtgagtatgagagagaaggttgtacaaaaatgattatacaaatatcatttctctt 21766556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 28676146 - 28676211
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttct 84  Q
    ||||| |||| ||||||||||||| ||||||| ||||  ||||||| |||| ||||||||||||||    
T  28676146 agtaagaatataatgtgagtatgaaagagaaagttgtcacaaaatggttgtacaaatatcatttct 28676211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 37022326 - 37022269
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||||||||||| ||| ||||  ||||||| |||| ||||||||||||||||||    
T  37022326 atgtgagtatgagagataaagttgtatcaaaatggttgtacaaatatcatttctcttt 37022269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 39606042 - 39605978
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||| | ||||||||||||||||||||| ||| || |||||| ||||||| |||||||||||||    
T  39606042 taaaaagataatgtgagtatgagagagaaagttg-tcaaaaatggttgttcatatatcatttctct 39605978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 42490996 - 42490919
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||  ||||||||| | ||||||||||||||||||||| ||||   ||| || |||| ||||||||||||||||    
T  42490996 agagagagaaagtaaaaacataatgtgagtatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttctct 42490919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 45678329 - 45678272
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||| |||||||||| |||||||| | ||||||||||| |||||| ||||||||||    
T  45678329 aatgtgggtatgagagataaaattgtacaaaaatgattgtacaaataacatttctctt 45678272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 49585082 - 49585029
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa 62  Q
    |||||||  ||||||||||| ||||||||||||||||||||| |||| ||||||    
T  49585082 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcccaaaa 49585029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 21392607 - 21392567
Alignment:
Q  48 aaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||| || |||||||||||||||||||||||||||||||    
T  21392607 aaaattattacaaaatgattgttcaaatatcatttctcttt 21392567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 52456921 - 52456957
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||||| ||||||||||||||||||||||||||    
T  52456921 agtaaaaatataatgtgagtatgagagagaaaattgt 52456957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 1580288 - 1580342
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||||||||||||||  |||| || |||| |||||||||||||||    
T  1580288 aatgtgagtatgagagagaaaattgtcacaaagtg-ttgtacaaatatcatttctc 1580342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 4511885 - 4511822
Alignment:
Q  25 aatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||| ||||||||||||||||||||| ||||   |||||| || | ||||||||||||||||||    
T  4511885 aatataatgtgagtatgagagagaaagttgtcataaaatggttatacaaatatcatttctcttt 4511822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 4974178 - 4974111
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||  |||||| |||||||||||||| |||||  |||||  |||| |||||||||||||||    
T  4974178 aagtaaaaatttaatgtgggtatgagagagaaagttgttaaaaaatagttgtacaaatatcatttctc 4974111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 7146127 - 7146194
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||| |||||||  | ||||||||| ||| |||||  |||||| |||||||||||||||||||||||    
T  7146127 taaaagtacaatgaaaatatgagagaaaaagttgtttaaaaatggttgttcaaatatcatttctcttt 7146194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 12387658 - 12387725
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||| ||||||| |||||  |||||| ||||   ||||||||||| |||||||||||||||    
T  12387658 aagtaaaaatataatgtgattatgaaggagaaagttgtcaaaaaatgattgtacaaatatcatttctc 12387725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 17683291 - 17683236
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||| ||||||||| ||||   ||||||| |||||||||||||||||||    
T  17683291 aatgtgagtataagagagaaagttgtcataaaatgaatgttcaaatatcatttctc 17683236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 39241306 - 39241361
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||||||||| ||||  |||| || |||| |||||||||||||||    
T  39241306 aatgtgagtatgagagagaaagttgtcacaaattggttgtacaaatatcatttctc 39241361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 46799901 - 46799940
Alignment:
Q  48 aaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  46799901 aaaattgtaccaaaatgattgttcaaatatcattgctctt 46799940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 56557810 - 56557775
Alignment:
Q  20 gtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||| ||||||||||||||||||||||||||||    
T  56557810 gtaaaaacacaatgtgagtatgagagagaaaattgt 56557775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 2109520 - 2109442
Alignment:
Q  8 gagagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    ||||||||  ||||||||| | ||||||||||||| ||||||| ||||   || ||| |||| ||||||||||||||||    
T  2109520 gagagagagaaagtaaaaacataatgtgagtatgaaagagaaagttgtcaaaagatggttgtacaaatatcatttctct 2109442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 32365673 - 32365727
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||| ||||||||||||| ||||  ||||||| |||| |||||||||||||||    
T  32365673 atgtgaatatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctc 32365727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 37297136 - 37297090
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||| | ||||||||||||||||||||||||||    
T  37297136 agagagagaaagtaaaaagataatgtgagtatgagagagaaaattgt 37297090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 40348881 - 40348835
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||| | ||||||||||||||||||||||||||    
T  40348881 agagagagaaagtaaaaagataatgtgagtatgagagagaaaattgt 40348835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 44257713 - 44257759
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||||| ||||||||||||||||||||| ||||    
T  44257713 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgt 44257759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 48494915 - 48494973
Alignment:
Q  28 acaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||| |||||||||| ||| |||||  ||| || |||||||||||||||||||||    
T  48494915 acaatgtgtgtatgagagataaagttgttaaaaagtggttgttcaaatatcatttctct 48494973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 49241970 - 49242020
Alignment:
Q  32 tgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcattt 82  Q
    ||||||||||| ||||||| ||||  |||||||||| ||||||||||||||    
T  49241970 tgtgagtatgaaagagaaagttgtgacaaaatgattattcaaatatcattt 49242020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 5234480 - 5234533
Alignment:
Q  34 tgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||| || |  |||| ||||||| |||||||||||||||||    
T  5234480 tgagtatgagagagaaagttatcacaaagtgattgtacaaatatcatttctctt 5234533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 16214745 - 16214680
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||| ||||| | |||| |||||||||||||  ||||||| || | ||||||||||||||||    
T  16214745 taaaaatataatgtaaatatgggagagaaaattgtgacaaaatggttatacaaatatcatttctct 16214680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 23094403 - 23094370
Alignment:
Q  58 caaaatgattgttcaaatatcatttctctttatt 91  Q
    |||||||||||| |||||||||||||||||||||    
T  23094403 caaaatgattgtacaaatatcatttctctttatt 23094370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 31413791 - 31413848
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||| ||||||||||||||| |||| | |||||  |||| |||||||||||||||||    
T  31413791 aatgtcagtatgagagagaaagttgtacaaaaatagttgtacaaatatcatttctctt 31413848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 38792882 - 38792919
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  38792882 aagtaaaaatataatgtgagtatgagagagaaagttgt 38792919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 46173605 - 46173548
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||||| |||||||||| ||||  |||| || |||| |||||||||||||||||    
T  46173605 aatgtgagtacgagagagaaagttgtcacaaagtggttgtacaaatatcatttctctt 46173548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 48148443 - 48148406
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgtt 56  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  48148443 agtaaaaatataatgtgagtatgagagataaaattgtt 48148406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 54036538 - 54036591
Alignment:
Q  34 tgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||| ||| ||||  ||||||| |||| |||||||||||||||||    
T  54036538 tgagtatgagagataaagttgtcacaaaatggttgtacaaatatcatttctctt 54036591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 6520824 - 6520868
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa 62  Q
    ||||||||| | ||||||||||||||||||||| ||||| |||||    
T  6520824 aagtaaaaacataatgtgagtatgagagagaaagttgttacaaaa 6520868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 7632445 - 7632489
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaatt 53  Q
    |||||||  ||||||||||| ||||||||||||| ||||||||||    
T  7632445 agagagagaaagtaaaaatataatgtgagtatgaaagagaaaatt 7632489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 19232117 - 19232157
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaa 49  Q
    |||||||  ||||||||||| ||||||||||||||||||||    
T  19232117 agagagagaaagtaaaaatataatgtgagtatgagagagaa 19232157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 31574935 - 31574967
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaatt 53  Q
    |||||||| ||||||||||||||||||||||||    
T  31574935 taaaaatataatgtgagtatgagagagaaaatt 31574967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 36177984 - 36177948
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattg 54  Q
    ||||||||| | |||||||||||||||||||||||||    
T  36177984 aagtaaaaagataatgtgagtatgagagagaaaattg 36177948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 39158131 - 39158103
Alignment:
Q  59 aaaatgattgttcaaatatcatttctctt 87  Q
    |||||||||||||||||||||||||||||    
T  39158131 aaaatgattgttcaaatatcatttctctt 39158103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 41010174 - 41010230
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    ||||||||||| ||||| | |||||| | |||||||||||  |||||||||||||||    
T  41010174 aatgtgagtataagagaaagaattgtacaaaaatgattgtataaatatcatttctct 41010230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 47288119 - 47288079
Alignment:
Q  48 aaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||| ||||||| |||| ||||||||||||||||||    
T  47288119 aaaattgttacaaaatggttgtacaaatatcatttctcttt 47288079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 49449197 - 49449229
Alignment:
Q  58 caaaatgattgttcaaatatcatttctctttat 90  Q
    ||||||| |||||||||||||||||||||||||    
T  49449197 caaaatggttgttcaaatatcatttctctttat 49449229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 51389353 - 51389313
Alignment:
Q  48 aaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||| | |||||||||| ||||||||||||||||||    
T  51389353 aaaattgttactaaatgattgtacaaatatcatttctcttt 51389313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 51930914 - 51930874
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaa 49  Q
    |||||||  ||||||||||| ||||||||||||||||||||    
T  51930914 agagagagaaagtaaaaatataatgtgagtatgagagagaa 51930874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 52851404 - 52851340
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||| |||||||||||| |||||||| ||||    ||||| |||| |||||||||||||||    
T  52851404 taaaaatataatgtgagtatgtgagagaaagttgtcatgaaatggttgtgcaaatatcatttctc 52851340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 54771541 - 54771505
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttc 57  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  54771541 taaaaatataatgtgagtataagagagaaaattgttc 54771505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 55601698 - 55601762
Alignment:
Q  23 aaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||| ||||||||||||||||||||| ||||   |||||   |||||||||||| ||||||||    
T  55601698 aaaatataatgtgagtatgagagagaaagttgtcataaaatagatgttcaaatatcttttctctt 55601762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 39211129 - 39211045
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctttattca 93  Q
    |||||||| ||||||||| | ||||||||||||||||||||| ||||   |||||| |||||||||||||||||||  |||||||    
T  39211129 agagagaaaaagtaaaaacaaaatgtgagtatgagagagaaagttgtcaaaaaatggttgttcaaatatcatttctgattattca 39211045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 41639782 - 41639861
Alignment:
Q  8 gagagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||  ||||||||||| ||||||||||||||||| |||||||||  ||||||  ||| |||||||||||||||||    
T  41639782 gagagagagaaagtaaaaatataatgtgagtatgagagaaaaaattgttagaaaatggatgtacaaatatcatttctctt 41639861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 14710889 - 14710958
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctttat 90  Q
    ||||| || ||||||||||||||||||||| ||||  |||||||||||| |||||||||||| |||||||    
T  14710889 taaaagtataatgtgagtatgagagagaaagttgtcacaaaatgattgtacaaatatcatttatctttat 14710958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 29108060 - 29107992
Alignment:
Q  20 gtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||| ||||||||||| | ||||||| |||||  ||||||||||| ||||||||||||||||||    
T  29108060 gtaaaaatataatgtgagtataaaagagaaagttgttaaaaaatgattgtacaaatatcatttctcttt 29107992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 6243100 - 6243045
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||||||||| |||| | ||||||||||| |||||||||||||||    
T  6243100 aatgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatatcatttctc 6243045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 7010739 - 7010684
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||||||||||||||||||||   ||||||||||| ||||||||||||||||    
T  7010739 atgtgagtatgagagagaaaattgtcaaaaaatgattgtacaaatatcatttctct 7010684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 33605071 - 33605114
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa 62  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  33605071 agtaaaaacacaatgtgagtatgagagagaaaattgttccaaaa 33605114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 30439490 - 30439567
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||  ||||||||| | ||||||||||||||||||||| ||||  |||||||  |||||||||||||||||||||    
T  30439490 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 30439567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 157134 - 157065
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||| ||||| ||||||||||||||| ||||  ||||||| |||| |||||||||||| ||||    
T  157134 aagtaaaaatataatgtaagtatgagagagaaagttgtcgcaaaatggttgtacaaatatcatttatctt 157065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 37471709 - 37471654
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||||| |||||||||| |||| | ||||||||||| |||||||||||||||    
T  37471709 aatgtgagtacgagagagaaagttgtacaaaaatgattgtacaaatatcatttctc 37471654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 40413357 - 40413412
Alignment:
Q  33 gtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||||||||||||| ||||  |||||| ||||| ||||||||||||||||||    
T  40413357 gtgagtatgagagagaaagttgtcacaaaataattgtacaaatatcatttctcttt 40413412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 67144 - 67190
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||||||||||||||| |||||| |||||||||||||| ||||    
T  67144 agagagaagaagtaaaaatataatgtgggtatgagagagaaagttgt 67190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 13924077 - 13924019
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||| |||||||||||| |||| | |||||| |||| ||||||||||||||||||    
T  13924077 aatgtgagcatgagagagaaagttgtacaaaaatggttgtacaaatatcatttctcttt 13924019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 37392128 - 37392190
Alignment:
Q  25 aatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||| ||||||||||||||||||||| ||||   |||||| |||| |||||||||||||||||    
T  37392128 aatataatgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctctt 37392190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 41541924 - 41541866
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||| ||||||||| ||||  |||||||  ||||||||||||||||||||||    
T  41541924 aatgtgagtataagagagaaagttgtcacaaaatggatgttcaaatatcatttctcttt 41541866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 1370284 - 1370345
Alignment:
Q  24 aaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||| |||||||||||| |||||||| ||||| |||| || |||| |||||||||||||||    
T  1370284 aaatataatgtgagtatgtgagagaaagttgttacaaagtggttgtacaaatatcatttctc 1370345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 7612987 - 7613049
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcattt 82  Q
    |||||| |||||||||||||||||||| |  |||||||  |||||||||||||||||||| ||||    
T  7612987 aagtaagaatacaatgtgagtatgagaaa--aaattgtcacaaaatgattgttcaaatattattt 7613049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 9630184 - 9630131
Alignment:
Q  36 agtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttta 89  Q
    ||||||| ||||||| |||||  |||||||||||||||||||||||||| ||||    
T  9630184 agtatgaaagagaaagttgttaaaaaatgattgttcaaatatcatttctattta 9630131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 35153052 - 35153015
Alignment:
Q  48 aaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  35153052 aaaattgttacaaaatgattgttcaaatatcatttctc 35153015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 37657055 - 37656998
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||||||||||||||| ||||  | |||||  ||||||||||||||||||||||    
T  37657055 atgtgagtatgagagagaaagttgtcactaaatggatgttcaaatatcatttctcttt 37656998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 41935041 - 41934988
Alignment:
Q  36 agtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttta 89  Q
    ||||||||||||||||||||  ||||||| |||| |||||| ||||||||||||    
T  41935041 agtatgagagagaaaattgtcacaaaatggttgtacaaataccatttctcttta 41934988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 42569733 - 42569794
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctttatt 91  Q
    ||||||| ||||||||||||| ||||   ||||||| |||||||||||||||||||| ||||    
T  42569733 aatgtgaatatgagagagaaagttgtcataaaatgaatgttcaaatatcatttctctatatt 42569794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 43590760 - 43590703
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||||||| || | | ||||||||| | |||||||||||||||||    
T  43590760 aatgtgagtatgagagagaaagttatacaaaaatgattatacaaatatcatttctctt 43590703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 45405815 - 45405880
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||| | ||||||||||||||||| ||| ||||  ||||||| |||| ||||||||||||||||    
T  45405815 taaaaacataatgtgagtatgagagaaaaagttgtatcaaaatggttgtacaaatatcatttctct 45405880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 34247843 - 34247783
Alignment:
Q  25 aatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||| |||||||||| |||| | |||||| || |||||||| ||||||||    
T  34247843 aatacaatgtgagtaagagagagaaagttgtactaaaatggtttttcaaataccatttctc 34247783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 43419951 - 43419875
Alignment:
Q  13 agaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttta 89  Q
    |||| ||||||||| | ||||| ||||| ||||||||||||||  |||| |  |||| |||||||||||||||||||    
T  43419951 agaaaaagtaaaaacataatgtaagtataagagagaaaattgtcacaaattagttgtacaaatatcatttctcttta 43419875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 7325790 - 7325723
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||| | ||||||||||||||||||||| |||||  ||| ||  ||| ||||||||||||||||||    
T  7325790 taaaaacataatgtgagtatgagagagaaagttgttataaagtggatgtacaaatatcatttctcttt 7325723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 24616409 - 24616363
Alignment:
Q  8 gagagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  24616409 gagagaaaagaa-taaaaatataatgtgagtatgagagagaaaattgt 24616363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 38939185 - 38939252
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||| | ||||||||||||||||||||| |||| | |||||  ||||  |||||||||||||||||    
T  38939185 taaaaacataatgtgagtatgagagagaaagttgtacaaaaatagttgtagaaatatcatttctcttt 38939252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 42786642 - 42786689
Alignment:
Q  8 gagagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||| ||||||||||| ||||||||||| ||||||||| ||||    
T  42786642 gagagagaaaaagtaaaaatataatgtgagtataagagagaaagttgt 42786689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 45081453 - 45081398
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||||| |||||||||  ||| || |||| |||||||||||||||    
T  45081453 aatgtgagtatgagagacaaaattgttaaaaattggttgtacaaatatcatttctc 45081398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 1796562 - 1796496
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||| |||| ||||||||||||||| ||||| ||||  |||| || |||| |||||||||||||||    
T  1796562 agtaataataaaatgtgagtatgagaaagaaagttgtcacaaagtggttgtacaaatatcatttctc 1796496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 5740769 - 5740847
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||  ||||||||| | ||||||||||||||||| ||| ||||   ||| || |||| |||||||||||||||||    
T  5740769 agagagagaaagtaaaaacataatgtgagtatgagagaaaaagttgtcaaaaagtggttgtacaaatatcatttctctt 5740847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 7678807 - 7678773
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||| ||||||||||||||||||||||||||    
T  7678807 taaaaatataatgtgagtatgagagagaaaattgt 7678773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 9963752 - 9963694
Alignment:
Q  30 aatgtgagtatga-gagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||| |||||||||||||   ||||| ||||| |||||||||||||||||    
T  9963752 aatgtgagtatgatgagagaaaattgtcaaaaaattattgtacaaatatcatttctctt 9963694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 24798350 - 24798388
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgtt 56  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  24798350 aagtaaaaatataatgtgagtatgagagagaaagttgtt 24798388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 25430712 - 25430654
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||| ||||  |||| | |||||| |||| ||||||||||||||||||    
T  25430712 aatgtgagtatgagatagaaggttgtacaaaaatggttgtacaaatatcatttctcttt 25430654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 25830229 - 25830275
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||||| ||||||||||||||||||||| ||||    
T  25830229 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgt 25830275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 28756623 - 28756577
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||| || |||||||| ||||||||||||||||| ||||||||    
T  28756623 agagagaaaaaataaaaatataatgtgagtatgagagataaaattgt 28756577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 35067248 - 35067202
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||||| ||||||||||||||||||||| ||||    
T  35067248 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgt 35067202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 35356173 - 35356227
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||| |||||||||||||| || |  |||||||| |||||||||||||||||||    
T  35356173 atgtgggtatgagagagaaagttatcacaaaatgaatgttcaaatatcatttctc 35356227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 41776240 - 41776186
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||||||||||||||| |||| | |||||  |||| |||||||||||||||    
T  41776240 atgtgagtatgagagagaaagttgtacaaaaatagttgtacaaatatcatttctc 41776186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 43715962 - 43715916
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||||| ||||||||||||||||||||| ||||    
T  43715962 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgt 43715916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 6440160 - 6440123
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  6440160 aagtaaaaatataatgtgagtatgagagagaaagttgt 6440123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 10692465 - 10692436
Alignment:
Q  59 aaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||||||||||||||||||    
T  10692465 aaaatgattgttcaaatatcatttctcttt 10692436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 32954906 - 32954853
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttct 84  Q
    |||||||||| ||||||||| ||||  |||||||  ||||||||||||||||||    
T  32954906 atgtgagtatcagagagaaagttgtcacaaaatggatgttcaaatatcatttct 32954853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 39884493 - 39884550
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||| || |||||   ||||| ||||| |||||||||||||||||    
T  39884493 aatgtgagtatgagagataatattgtaataaaataattgtacaaatatcatttctctt 39884550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 43285955 - 43285992
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  43285955 aagtaaaaatataatgtgagtatgagagagaaagttgt 43285992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 5502426 - 5502370
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    ||||||| ||||||||||||| ||||  |||| || |||| ||||||||||||||||    
T  5502426 aatgtgaatatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctct 5502370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 8233506 - 8233554
Alignment:
Q  35 gagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttc 83  Q
    ||||||||||||||||  ||| | ||||||||||| |||||||||||||    
T  8233506 gagtatgagagagaaagatgtacaaaaatgattgtacaaatatcatttc 8233554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 16011913 - 16011977
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||| ||||||| ||||||||||||| ||||  |||| || |||| ||||||| |||||||    
T  16011913 taaaaatataatgtgaatatgagagagaaatttgtcacaaagtggttgtacaaatattatttctc 16011977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 86
Target Start/End: Original strand, 17775473 - 17775501
Alignment:
Q  58 caaaatgattgttcaaatatcatttctct 86  Q
    |||||||||||||||||||||||||||||    
T  17775473 caaaatgattgttcaaatatcatttctct 17775501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 20996185 - 20996221
Alignment:
Q  52 ttgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  20996185 ttgttcaaaaatgattgtacaaatatcatttctcttt 20996221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 21526273 - 21526317
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa 62  Q
    ||||||||| | |||||||||||||||||||||| |||| |||||    
T  21526273 aagtaaaaacataatgtgagtatgagagagaaaactgttacaaaa 21526317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 32501191 - 32501227
Alignment:
Q  20 gtaaaaatacaatgtgagtatgagagagaaaattgtt 56  Q
    ||||||| | |||||||||||||||||||||||||||    
T  32501191 gtaaaaaaataatgtgagtatgagagagaaaattgtt 32501227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 33589234 - 33589266
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaa 62  Q
    ||||||||||||||||||||||||||| |||||    
T  33589234 aatgtgagtatgagagagaaaattgttgcaaaa 33589266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 33817193 - 33817153
Alignment:
Q  48 aaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||| |||| ||||||| ||||||||||||||||||    
T  33817193 aaaattgttacaaattgattgtacaaatatcatttctcttt 33817153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 34018875 - 34018843
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaa 62  Q
    ||||||||||||||||||||||||||| |||||    
T  34018875 aatgtgagtatgagagagaaaattgttgcaaaa 34018843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 34639557 - 34639529
Alignment:
Q  59 aaaatgattgttcaaatatcatttctctt 87  Q
    |||||||||||||||||||||||||||||    
T  34639557 aaaatgattgttcaaatatcatttctctt 34639529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 34873924 - 34873848
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||  ||||||||| | ||||| ||||||||| | ||| ||||  |||||| |||||| ||||||||||||||    
T  34873924 agagagagaaagtaaaaaaataatgttagtatgagaaataaagttgtcacaaaataattgttaaaatatcatttctc 34873848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 36023121 - 36023081
Alignment:
Q  48 aaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||||  ||||| ||||||||||||||||||||||||    
T  36023121 aaaattgttaaaaaataattgttcaaatatcatttctcttt 36023081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 36251351 - 36251323
Alignment:
Q  59 aaaatgattgttcaaatatcatttctctt 87  Q
    |||||||||||||||||||||||||||||    
T  36251351 aaaatgattgttcaaatatcatttctctt 36251323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 37524424 - 37524488
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||| || |||||||||||| |||||||| ||||  |||| || |||| |||||||||||||||    
T  37524424 taaaagtataatgtgagtatgtgagagaaagttgtcacaaagtgcttgtacaaatatcatttctc 37524488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 41521035 - 41521003
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaa 62  Q
    ||||||||||||||||||||||||||| |||||    
T  41521035 aatgtgagtatgagagagaaaattgttgcaaaa 41521003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 45504645 - 45504605
Alignment:
Q  13 agaagaagtaaaaatacaatgtgagtatgagagagaaaatt 53  Q
    |||| ||||||||||| ||||||||||||| ||||||||||    
T  45504645 agaaaaagtaaaaatataatgtgagtatgatagagaaaatt 45504605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 5905961 - 5906027
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||  ||||||||||||||||||||| || | ||||||||||||| |||||||||||||||||    
T  5905961 taaaaatctaatgtgagtatgagagagaaagttataccaaaatgattgtacaaatatcatttctctt 5906027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 2469763 - 2469700
Alignment:
Q  25 aatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||||||||||||||||||||| ||||  |||| || |||| ||||||||||||||||||    
T  2469763 aatacaatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctcttt 2469700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 33465044 - 33465099
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||||||||||||||||||||| | |||||| |||| |||||||||||||||    
T  33465044 aatgtgagtatgagagagaaaattgtacaaaaatggttgtacaaatatcatttctc 33465099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 43213374 - 43213315
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttta 89  Q
    |||||||||||||||||||||||||||  ||| || |||| |||||||||||||||||||    
T  43213374 aatgtgagtatgagagagaaaattgttagaaagtggttgtacaaatatcatttctcttta 43213315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 3937114 - 3937184
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||| | ||||||||||||||||||||| ||||  ||||||   ||||||||||||||||||||||    
T  3937114 aagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaatagatgttcaaatatcatttctcttt 3937184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 7817723 - 7817644
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctttat 90  Q
    |||||||  |||||||||||  |||||||||||||||||||| ||||  |||||||  |||||||||||||||||| |||||    
T  7817723 agagagataaagtaaaaata--atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctttttat 7817644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 41985105 - 41985162
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||||||| ||||  |||| ||||||| |||||||||||||||||    
T  41985105 aatgtgagtatgagagagaaagttgtcacaaattgattgtacaaatatcatttctctt 41985162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 41989735 - 41989803
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||| ||||||||||||||||||||| ||| |  |||||| ||||| ||||||||||||||||    
T  41989735 aagtaaaaatataatgtgagtatgagagagaaagttg-taaaaaatggttgttaaaatatcatttctctt 41989803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 49142522 - 49142578
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||||||||||||||||||| | | |||||| |||| ||||||||||||||||    
T  49142522 aatgtgagtatgagagagaaaattttacaaaaatggttgtacaaatatcatttctct 49142578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 43942724 - 43942646
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||  ||||||||| | ||||||||||||||||||||| ||| |  |||||  |||||||||||||||||||||||    
T  43942724 agagagagaaagtaaaaagataatgtgagtatgagagagaaagttg-taaaaaatagttgttcaaatatcatttctcttt 43942646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 18111595 - 18111641
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||||    
T  18111595 agagagataaagtaaaaatataatgtgagtatgagagagaaaattgt 18111641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 29923737 - 29923679
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||||||||| |||| | ||||||||||| ||||| |||||| |||||    
T  29923737 aatgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatgtcatttatcttt 29923679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 37351995 - 37352053
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||||||||| ||||  |||| || |||| ||||||||||||||||||    
T  37351995 aatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctcttt 37352053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 40854638 - 40854684
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||||    
T  40854638 agagagagaaagtaaaaatataatgtgagtatgagagagaaaattgt 40854684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 237091 - 237026
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttc 83  Q
    |||||||| || ||||||||||||||||| ||| ||||  |||| ||||||| |||||||||||||    
T  237091 aagtaaaagtataatgtgagtatgagagataaagttgtcacaaattgattgtacaaatatcatttc 237026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 6822538 - 6822595
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||| ||| |||||  |||||| |||| |||||||||||||||||    
T  6822538 aatgtgagtatgagagaaaaagttgttagaaaatggttgtacaaatatcatttctctt 6822595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 11352978 - 11353035
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||||||| ||||  ||||||   |||||||||||||||||||||    
T  11352978 aatgtgagtatgagagagaaagttgtcacaaaattgatgttcaaatatcatttctctt 11353035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 22330636 - 22330693
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||||||| ||||  |||| || |||| |||||||||||||||||    
T  22330636 aatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctctt 22330693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 37848631 - 37848680
Alignment:
Q  36 agtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||| |||| | ||||||||||| |||||||||||||||    
T  37848631 agtatgagagagaaagttgtacaaaaatgattgtacaaatatcatttctc 37848680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 31274524 - 31274604
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttta 89  Q
    |||||||  ||||||||||| | ||||||||| ||||| ||| ||||  |||| || |||| |||||||||||||||||||    
T  31274524 agagagagaaagtaaaaataaagtgtgagtataagagaaaaagttgtcacaaattggttgtacaaatatcatttctcttta 31274604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 3293195 - 3293140
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||| ||||||||||||| ||||  | |||||| ||||||||||||||||||||    
T  3293195 atgtgaatatgagagagaaagttgtcaccaaatgaatgttcaaatatcatttctct 3293140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 26749068 - 26749014
Alignment:
Q  33 gtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||||||||||||| |||| | |||||  |||||||||||||||||||||||    
T  26749068 gtgagtatgagagagaaagttgt-caaaaattgttgttcaaatatcatttctcttt 26749014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 27570409 - 27570354
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||||||||||||||| || ||  |||||  |||||||||||||||||||||    
T  27570409 atgtgagtatgagagagaaagttattaaaaaatagttgttcaaatatcatttctct 27570354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 27866542 - 27866597
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||||| ||| |||| | |||||| |||| |||||||||||||||    
T  27866542 aatgtgagtatgagagataaagttgtacaaaaatggttgtacaaatatcatttctc 27866597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 29855311 - 29855268
Alignment:
Q  12 gagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||| |||||||||||| ||||||||||||||||||||| ||||    
T  29855311 gagatgaagtaaaaatataatgtgagtatgagagagaaagttgt 29855268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 33224889 - 33224834
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||||||||||||||| ||||  ||||||   ||||||||||||||||||||    
T  33224889 atgtgagtatgagagagaaagttgtcacaaaatagatgttcaaatatcatttctct 33224834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 3062397 - 3062343
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttct 84  Q
    ||||||||||| ||||||||| ||||  |||||||  ||||||||||||||||||    
T  3062397 aatgtgagtataagagagaaagttgtcacaaaatggatgttcaaatatcatttct 3062343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 31675039 - 31675085
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||| ||||||||| | |||||||||||||||| |||||||||    
T  31675039 agagagaaaaagtaaaaacaaaatgtgagtatgagagtgaaaattgt 31675085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 31711942 - 31711996
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||||||||| ||||| ||||  |||||||| | |||||||||||||||||    
T  31711942 atgtgagtatgagaaagaaagttgtcacaaaatgaatattcaaatatcatttctc 31711996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 31785468 - 31785534
Alignment:
Q  22 aaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||| ||||||||||||||||||||||| || |   ||| || |||| ||||||||||||||||||    
T  31785468 aaaaacacaatgtgagtatgagagagaaagttttcataaagtggttgtacaaatatcatttctcttt 31785534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 42584890 - 42584844
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||||| ||||||||||||||||||||| ||||    
T  42584890 agagagataaagtaaaaatataatgtgagtatgagagagaaagttgt 42584844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 2323358 - 2323301
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||||||||||||||| ||||   |||||  |||| ||||||||||||||||||    
T  2323358 atgtgagtatgagagagaaagttgtcataaaattgttgtacaaatatcatttctcttt 2323301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 7295522 - 7295485
Alignment:
Q  25 aatacaatgtgagtatgagagagaaaattgttccaaaa 62  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  7295522 aatataatgtgagtatgagagagaaagttgttccaaaa 7295485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 23848136 - 23848083
Alignment:
Q  38 tatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctttatt 91  Q
    ||||| ||||||| |||||  ||||||||| | |||||||||||||||||||||    
T  23848136 tatgatagagaaagttgttaaaaaatgattatacaaatatcatttctctttatt 23848083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 24700154 - 24700117
Alignment:
Q  52 ttgttccaaaatgattgttcaaatatcatttctcttta 89  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  24700154 ttgttacaaaatgattgtacaaatatcatttctcttta 24700117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 31289399 - 31289440
Alignment:
Q  48 aaaattgttccaaaatgattgttcaaatatcatttctcttta 89  Q
    |||||||||| ||| || ||||||||||||||||||||||||    
T  31289399 aaaattgttcaaaagtggttgttcaaatatcatttctcttta 31289440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 37856170 - 37856227
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||||||| |||| ||| ||||  ||||||| |||| |||||||||||||||||    
T  37856170 aatgtgagtatgtgagataaagttgtcacaaaatggttgtacaaatatcatttctctt 37856227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 40108190 - 40108133
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||||||| ||||   |||||| |||| |||| ||||||||||||    
T  40108190 aatgtgagtatgagagagaaagttgtataaaaatggttgtacaaacatcatttctctt 40108133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 45420044 - 45420121
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||  ||||||||  | ||||||| ||||||||||||| ||||   |||||  |||||||||||||||||||||    
T  45420044 agagagagaaagtaaaatgataatgtgaatatgagagagaaagttgtcaaaaaatagttgttcaaatatcatttctct 45420121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 46095026 - 46094965
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcattt 82  Q
    |||||||| ||| ||||||||||||| |||||| ||  ||||  ||||||||||||||||||    
T  46095026 taaaaatataatatgagtatgagagaaaaaattattaaaaaaaaattgttcaaatatcattt 46094965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 47078235 - 47078311
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||  ||||||||| | ||||||||||||||||||||| ||||   |||||   ||||||||||||||||||||    
T  47078235 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcataaaatagatgttcaaatatcatttctct 47078311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 47448905 - 47448868
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  47448905 aagtaaaaacacaatgtgagtatgagagagaaagttgt 47448868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 4678140 - 4678104
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  4678140 agtaagaatataatgtgagtatgagagagaaaattgt 4678104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 18157179 - 18157215
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  18157179 agtaagaatataatgtgagtatgagagagaaaattgt 18157215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 24380726 - 24380782
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    ||||||||||||||| ||||| ||||   |||||| |||| ||||||||||||||||    
T  24380726 aatgtgagtatgagaaagaaagttgtataaaaatggttgtacaaatatcatttctct 24380782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 34108848 - 34108884
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||| | ||||||||||||||||||||||||||    
T  34108848 agtaaaaacataatgtgagtatgagagagaaaattgt 34108884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 34304672 - 34304708
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  34304672 agtaagaatataatgtgagtatgagagagaaaattgt 34304708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 38023418 - 38023454
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  38023418 agtaaaaatagaatgtgagtatgagagagaaagttgt 38023454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 41798297 - 41798261
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  41798297 agtaaaaatataatgtaagtatgagagagaaaattgt 41798261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 46829516 - 46829476
Alignment:
Q  48 aaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||| ||||||| |||| ||||||||||||||||||    
T  46829516 aaaattgttacaaaatggttgtacaaatatcatttctcttt 46829476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 10711791 - 10711731
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctttat 90  Q
    ||||||||||||||||||||||||||  ||||||   ||||||||||||||||||||||||    
T  10711791 aatgtgagtatgagagagaaaattgtcacaaaatagatgttcaaatatcatttctctttat 10711731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 24727490 - 24727426
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||| | ||||||||||||||||||||| |||| |||||||| |||| |||||||||||||||    
T  24727490 taaaaacataatgtgagtatgagagagaaagttgtaccaaaatggttgtacaaatatcatttctc 24727426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 42607536 - 42607592
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||    
T  42607536 atgtgagtatgagagagaaaattgtcacaaaataattgtacaaatatcatttctctt 42607592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 27329121 - 27329172
Alignment:
Q  37 gtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  27329121 gtatgagagagaaagttgtaccaaaatgattgtacaaatatcatttctcttt 27329172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 40700283 - 40700204
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||  ||||||||||| ||||||||||||||||||||| |||||  |||||  |||| |||||| |||||||||||    
T  40700283 agagagataaagtaaaaatataatgtgagtatgagagagaaagttgttataaaatagttgtacaaataccatttctcttt 40700204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 285465 - 285530
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||| | ||| |||||||| |||||||| |||||||||||||| ||| ||||||||||||||||    
T  285465 taaaaacataatatgagtatgcgagagaaagttgttccaaaatgaatgtacaaatatcatttctct 285530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 6646889 - 6646832
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||||||||||||||| ||||  |||||||  ||||||||||||||||||||||    
T  6646889 atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctcttt 6646832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 6842543 - 6842620
Alignment:
Q  11 agagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||| ||| |||||||| |||||||||||||||||||||||||||  |||||| ||||  ||||||  |||||||||    
T  6842543 agagaggaaataaaaatataatgtgagtatgagagagaaaattgttataaaatggttgtataaatatattttctcttt 6842620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 33737326 - 33737395
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||| | || |||||||||||||||||| ||||  ||||||| | ||||||||||||||||||||    
T  33737326 aagtaaaaacataacgtgagtatgagagagaaatttgtcacaaaatggtagttcaaatatcatttctctt 33737395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 38724314 - 38724383
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctttat 90  Q
    |||||| | ||||||||| |||||||||||||| | | |||||| |||| ||||||||||||||||||||    
T  38724314 taaaaacataatgtgagtgtgagagagaaaattatactaaaatggttgtacaaatatcatttctctttat 38724383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 22296134 - 22296190
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    ||||||||||| |||||||||||||| | |||||| |||| ||||||||||||||||    
T  22296134 aatgtgagtatcagagagaaaattgtacaaaaatggttgtacaaatatcatttctct 22296190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 22353180 - 22353236
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    ||||||||||||||| ||||| ||||  |||||||||||| ||||||||||||||||    
T  22353180 aatgtgagtatgagaaagaaagttgtcacaaaatgattgtacaaatatcatttctct 22353236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 7121445 - 7121390
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||||||||| ||||| ||||||| || | |||||||||||||||    
T  7121445 aatgtgagtatgagagagaaagttgttacaaaatggttatacaaatatcatttctc 7121390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 10472131 - 10472209
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||  ||||||||||| ||||||||||||||||||||| |||||  |||||| || | ||||||| ||||||||||    
T  10472131 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgttagaaaatggttatacaaatat-atttctcttt 10472209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 37737982 - 37738036
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||||||||||| |||| | |||||| ||||||||||||||||||||    
T  37737982 aatgtgagtatgagagagaaagttgt-cgaaaatggttgttcaaatatcatttctc 37738036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 9432077 - 9432011
Alignment:
Q  22 aaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||| ||| ||||||||| ||||||||||||  ||||||| |||| ||||| ||||||||||||    
T  9432077 aaaaatataatatgagtatgaaagagaaaattgtatcaaaatggttgtacaaatttcatttctcttt 9432011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 37966671 - 37966625
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  37966671 agagagaaaaagtaaaaatataatgtgagtatgaaagagaaaattgt 37966625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 43076361 - 43076307
Alignment:
Q  34 tgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||||||||||||||||| | ||||||||| | ||||||||||||| ||||    
T  43076361 tgagtatgagagagaaaattgtacaaaaatgattatacaaatatcatttcacttt 43076307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 3012850 - 3012907
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||| ||||||||||||||| ||||  |||||||  |||||||||||||||||||||    
T  3012850 aatgtaagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 3012907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 4138178 - 4138247
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||| || ||||||||||||||||||||| |||||  |||||  || | |||||||||||||||||    
T  4138178 aagtaaaattataatgtgagtatgagagagaaagttgttagaaaatagttatacaaatatcatttctctt 4138247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 5361872 - 5361835
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  5361872 aagtaaaaatataatgtgagtatgagagagaaaattgt 5361835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 29795502 - 29795445
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||||||| |||||||| ||||  ||||||| |||| |||||||||||||||||    
T  29795502 aatgtgagtatgtgagagaaagttgtcacaaaatggttgtacaaatatcatttctctt 29795445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 32972912 - 32972969
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||||||||||||||| ||||  |||||||  |||||||||||||||| |||||    
T  32972912 atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttatcttt 32972969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 42678836 - 42678760
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||  ||||||||| | ||||||||||||||||||||| ||||  | |||||  ||||||||||||||||||||    
T  42678836 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcactaaatggatgttcaaatatcatttctct 42678760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 8482227 - 8482295
Alignment:
Q  20 gtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||| ||||||| ||||||||||||| ||||   ||| || |||| ||||||||||||||||||    
T  8482227 gtaaaaatataatgtgaatatgagagagaaagttgtcataaagtggttgtacaaatatcatttctcttt 8482295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 39310041 - 39309977
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||| | |||||||||||  || ||||||||||| |||||||||| | |||||||||||||||    
T  39310041 taaaaacataatgtgagtataggaaagaaaattgttacaaaatgattatacaaatatcatttctc 39309977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 39430734 - 39430662
Alignment:
Q  16 agaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||  ||||||||||| | ||||||| ||||   ||| ||||||||||||||||||| ||||||    
T  39430734 agaagtaaaaatgtaatgtgagtataaaagagaaagttgtcagaaattgattgttcaaatatcattactcttt 39430662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 2971823 - 2971878
Alignment:
Q  34 tgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttta 89  Q
    ||||||||||||||||| ||||  |||||||  |||||||||||| ||||||||||    
T  2971823 tgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcttttctcttta 2971878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 21738608 - 21738643
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaatt 53  Q
    ||||||||||| ||||||||||||||||||||||||    
T  21738608 aagtaaaaatataatgtgagtatgagagagaaaatt 21738643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 4263857 - 4263926
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||| |||| ||||||||||||| ||||||| ||||   |||||| |||| ||||||||||||||||||    
T  4263857 aagtaagaatataatgtgagtatgaaagagaaagttgtcaaaaaatg-ttgtacaaatatcatttctcttt 4263926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 89
Target Start/End: Original strand, 17388640 - 17388670
Alignment:
Q  59 aaaatgattgttcaaatatcatttctcttta 89  Q
    |||||||||||||||||||||||||||||||    
T  17388640 aaaatgattgttcaaatatcatttctcttta 17388670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 89
Target Start/End: Complemental strand, 18846640 - 18846610
Alignment:
Q  59 aaaatgattgttcaaatatcatttctcttta 89  Q
    |||||||||||||||||||||||||||||||    
T  18846640 aaaatgattgttcaaatatcatttctcttta 18846610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 23352909 - 23352963
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttct 84  Q
    ||||||||||||||||||||| ||||  |||||||  ||||||| ||||||||||    
T  23352909 aatgtgagtatgagagagaaagttgtcacaaaatggctgttcaagtatcatttct 23352963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 29449299 - 29449253
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||||| ||||||||||||||||||||| ||||    
T  29449299 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgt 29449253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 30192347 - 30192389
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaat 63  Q
    ||||||||  ||||||||||||||||||||||||||| |||||    
T  30192347 taaaaatatcatgtgagtatgagagagaaaattgttcaaaaat 30192389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 32975124 - 32975070
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttct 84  Q
    ||||||||||||||||| ||||||||  |||||| |||||  |||||||||||||    
T  32975124 aatgtgagtatgagagataaaattgtcacaaaataattgtcaaaatatcatttct 32975070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 35792645 - 35792699
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||||||||| | ||||||||  ||||||| |||| |||||||||||||||    
T  35792645 atgtgagtatgagaaaaaaaattgtaacaaaatggttgtacaaatatcatttctc 35792699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 37085217 - 37085283
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||| ||| ||| ||||| ||||||| ||||| |||| ||| ||| |||||||||||||||||    
T  37085217 taaaaatataatatgaatatgaaagagaaagttgttacaaattgaatgtacaaatatcatttctctt 37085283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 38777957 - 38777903
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttct 84  Q
    ||||||| ||||||||||||||||||   ||||||||||| |||||||| |||||    
T  38777957 aatgtgaatatgagagagaaaattgtataaaaatgattgtacaaatatcctttct 38777903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 40937048 - 40937125
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||  ||||||||| | ||||||||||||||||||||| || |  |||||||  ||||||||| |||||||||||    
T  40937048 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttatcacaaaatggatgttcaaatgtcatttctctt 40937125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 304996 - 305045
Alignment:
Q  38 tatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||| |||| |||||||| |||| ||||||| |||||||||    
T  304996 tatgagagagaaagttgtaccaaaatggttgtacaaatataatttctctt 305045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 6885485 - 6885542
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||||||||||||   |||||  |||| |||| ||||||||||||    
T  6885485 aatgtgagtatgagagagaaaattgtataaaaatagttgtacaaaaatcatttctctt 6885542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 7485526 - 7485457
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||| |||||||| ||||| ||| ||| | ||||  |||| || ||||||||||||||||||||||    
T  7485526 aagtaaaattacaatgtaagtataagaaagacagttgtcacaaagtggttgttcaaatatcatttctctt 7485457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 9647219 - 9647143
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||  ||||||||| | ||| ||||||||||||||||| ||| |  |||||  |||||||||||||||||||||    
T  9647219 agagagagaaagtaaaaagataatatgagtatgagagagaaagttg-taaaaaatagttgttcaaatatcatttctct 9647143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 13453843 - 13453779
Alignment:
Q  22 aaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||| ||||||||||||||||| ||| ||| || ||||  ||||| |||||||||||||||||    
T  13453843 aaaaatataatgtgagtatgagagaaaaagttg-tcaaaaaaaattgtacaaatatcatttctctt 13453779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 13881161 - 13881104
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||| ||| ||| |||| | ||||||||||| |||| ||||||||||||    
T  13881161 aatgtgagtatgaaagataaagttgtacaaaaatgattgtacaaacatcatttctctt 13881104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 14021286 - 14021229
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||| ||| ||| |||| | ||||||||||| |||| ||||||||||||    
T  14021286 aatgtgagtatgaaagataaagttgtacaaaaatgattgtacaaacatcatttctctt 14021229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 26277182 - 26277106
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||||  ||||||||| | ||||||||||| ||||||||| ||||  | |||||  ||||||||||||||||||||    
T  26277182 agagagataaagtaaaaa-ataatgtgagtataagagagaaagttgtcactaaatggatgttcaaatatcatttctct 26277106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 33583228 - 33583280
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttct 84  Q
    |||||||||||| ||||||||||| || ||||||||| | ||||||||||||||    
T  33583228 atgtgagtatgaaagagaaaattg-tcaaaaatgattatacaaatatcatttct 33583280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 40115581 - 40115524
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||| |||||||||||||||||| | | |||||  |||| |||||||||||||||||    
T  40115581 aatgttagtatgagagagaaaattatacaaaaatagttgtacaaatatcatttctctt 40115524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 42372567 - 42372494
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcattt 82  Q
    |||||||  ||||||||| | ||||||||||||||||||||| ||||  | ||||   ||||||||||||||||    
T  42372567 agagagataaagtaaaaaaataatgtgagtatgagagagaaagttgtcactaaatagatgttcaaatatcattt 42372494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 1095832 - 1095904
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctttattca 93  Q
    |||||| | ||| ||| ||||||||||||||||||   ||||||  ||| ||||||||||||||||| |||||    
T  1095832 taaaaacataatatgaatatgagagagaaaattgtcataaaatggatgtacaaatatcatttctcttcattca 1095904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 5167734 - 5167770
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  5167734 agtaagaatataatgtgagtatgagagagaaaattgt 5167770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 6511556 - 6511616
Alignment:
Q  25 aatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||| ||||| | ||||||||||||||||||  |||||||  ||| |||||||||||||||    
T  6511556 aatataatgtaaatatgagagagaaaattgtcacaaaatggatgtccaaatatcatttctc 6511616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 8352912 - 8352876
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  8352912 agtaagaatataatgtgagtatgagagagaaaattgt 8352876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 19668179 - 19668215
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  19668179 agtaagaatagaatgtgagtatgagagagaaaattgt 19668215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 23358565 - 23358609
Alignment:
Q  11 agagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||| |||||| |||| ||||||||||||||||||||| ||||    
T  23358565 agagaaaaagtaagaatataatgtgagtatgagagagaaagttgt 23358609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 34215348 - 34215284
Alignment:
Q  13 agaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatat 77  Q
    |||| ||||||||| | ||||||| ||||||||||||||||||   ||||| ||||| |||||||    
T  34215348 agaaaaagtaaaaacataatgtgaatatgagagagaaaattgtcaaaaaataattgtacaaatat 34215284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 35589391 - 35589423
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaa 62  Q
    ||||||||||||||||||||||||||| |||||    
T  35589391 aatgtgagtatgagagagaaaattgttgcaaaa 35589423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 42866837 - 42866762
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||  ||||||||| | ||||||||||||||||| ||| ||||  |||||||   ||||||||||||||||||    
T  42866837 agagagataaagtaaaaa-ataatgtgagtatgagagaaaaagttgtcacaaaatggacgttcaaatatcatttctc 42866762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 16352153 - 16352219
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttct 84  Q
    ||||||||||| ||||||| |||||||||||||||||||  |||||| ||||  |||||||||||||    
T  16352153 aagtaaaaatataatgtgattatgagagagaaaattgttataaaatggttgtataaatatcatttct 16352219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 2060628 - 2060696
Alignment:
Q  20 gtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||| ||||||||||||||||| ||| ||||   |||||| || ||||||||||||||||||||    
T  2060628 gtaaaaatataatgtgagtatgagagaaaaagttgtcataaaatggttattcaaatatcatttctcttt 2060696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 2163757 - 2163702
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||| ||||||||||||||||||||  |||| ||||||| |||||||||||||||    
T  2163757 aatgtaagtatgagagagaaaattgtcacaaattgattgtacaaatatcatttctc 2163702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 2175390 - 2175335
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||| ||||||||||||||||||||  |||| ||||||| |||||||||||||||    
T  2175390 aatgtaagtatgagagagaaaattgtcacaaattgattgtacaaatatcatttctc 2175335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 32135436 - 32135491
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||||||||||| ||||||| |||| | ||||||||||| |||||||||||||||    
T  32135436 aatgtgagtatgatagagaaagttgtacaaaaatgattgtacaaatatcatttctc 32135491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 5570317 - 5570363
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||| || |||||||| ||||||||||||||||||||||||||    
T  5570317 agagagaaaaaataaaaatataatgtgagtatgagagagaaaattgt 5570363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 32644689 - 32644623
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||||| ||||||||||||||||||||| ||||   |||||  |||| |||||||||||||||    
T  32644689 agtaaaaatataatgtgagtatgagagagaaagttgtcaaaaaatagttgtacaaatatcatttctc 32644623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 11549050 - 11549095
Alignment:
Q  37 gtatgagagagaaaattgttccaaaatgattgttcaaatatcattt 82  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||||    
T  11549050 gtatgagaaagaaaattgttcctaaatgattgtacaaatatcattt 11549095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 28748175 - 28748122
Alignment:
Q  34 tgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||| ||||  |||||||  |||||||||||||||||||||    
T  28748175 tgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 28748122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 31413612 - 31413539
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcattt 82  Q
    |||||||  ||||||||||| ||| | ||||| ||||||||||||||  |||||| ||||| ||||||||||||    
T  31413612 agagagataaagtaaaaataaaatataagtattagagagaaaattgtcacaaaataattgtacaaatatcattt 31413539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 16328692 - 16328763
Alignment:
Q  18 aagtaaaaatacaatgtgagtat--gagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||| |||||||||||  |||||| ||| |||||  |||||| |||| |||||||||||||||||    
T  16328692 aagtaaaaatataatgtgagtatatgagagataaagttgttataaaatggttgtacaaatatcatttctctt 16328763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 16337915 - 16337959
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa 62  Q
    ||||||||||| ||||||||||||||||||||| ||||| |||||    
T  16337915 aagtaaaaatataatgtgagtatgagagagaaagttgttacaaaa 16337959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 28041816 - 28041875
Alignment:
Q  28 acaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||||| ||| ||||| | |||||  |||| ||||||||||||||||    
T  28041816 acaatgtgagtatgagagaaaaagttgttaccaaatggatgtttaaatatcatttctctt 28041875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 2165305 - 2165363
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||| |||||||||||| ||| |||| | |||||| |||| ||||||||||||||||||    
T  2165305 aatgcgagtatgagagataaagttgtacaaaaatggttgtacaaatatcatttctcttt 2165363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 2176938 - 2176996
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||| |||||||||||| ||| |||| | |||||| |||| ||||||||||||||||||    
T  2176938 aatgcgagtatgagagataaagttgtacaaaaatggttgtacaaatatcatttctcttt 2176996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 13423056 - 13423010
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||||| ||||||||||||||||||||| ||||    
T  13423056 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgt 13423010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 55
Target Start/End: Original strand, 34442062 - 34442092
Alignment:
Q  25 aatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||||||||||||||||||||||||||    
T  34442062 aatacaatgtgagtatgagagagaaaattgt 34442092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 1196113 - 1196056
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||| ||||||||| ||||   ||| ||||||| |||||||||||||||||    
T  1196113 aatgtgagtattagagagaaagttgtcaaaaagtgattgtacaaatatcatttctctt 1196056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 88
Target Start/End: Original strand, 2242067 - 2242096
Alignment:
Q  59 aaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||||||||||||||||||    
T  2242067 aaaatgattgttcaaatatcatttctcttt 2242096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 5028270 - 5028327
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||| ||||||||| ||||  |||||||  |||| ||||||||||||||||    
T  5028270 aatgtgagtataagagagaaagttgtcacaaaatggatgtttaaatatcatttctctt 5028327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 88
Target Start/End: Original strand, 8505819 - 8505848
Alignment:
Q  59 aaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||||||||||||||||||    
T  8505819 aaaatgattgttcaaatatcatttctcttt 8505848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 11547513 - 11547565
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa 62  Q
    |||||||  ||||||||| | ||||||||||||||||||||||||||| |||||    
T  11547513 agagagataaagtaaaaa-ataatgtgagtatgagagagaaaattgttgcaaaa 11547565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 12441592 - 12441535
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||||||||||||||| ||||  |||| |  |||| ||||||||||||||||||    
T  12441592 atgtgagtatgagagagaaagttgtcacaaagtagttgtacaaatatcatttctcttt 12441535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 15368861 - 15368902
Alignment:
Q  52 ttgttccaaaatgattgttcaaatatcatttctctttattca 93  Q
    ||||| |||||||  |||||||||||||||||||||||||||    
T  15368861 ttgttacaaaatggatgttcaaatatcatttctctttattca 15368902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 17442888 - 17442831
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||| ||||||||| |||| | |||||| |||| ||||||| |||||||||    
T  17442888 aatgtgagtataagagagaaagttgtacaaaaatggttgtacaaatattatttctctt 17442831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 17551362 - 17551415
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa 62  Q
    |||||||  ||||||||| | ||||||||||||||||||||| ||||| |||||    
T  17551362 agagagataaagtaaaaacataatgtgagtatgagagagaaagttgttacaaaa 17551415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 23653886 - 23653923
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  23653886 aagtaaaaatataatgtgagtatgagagagaaagttgt 23653923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 25561945 - 25562002
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||| ||| ||||   ||||||||||| | |||||||||||||||    
T  25561945 aatgtgagtatgagagataaagttgtataaaaatgattgtacgaatatcatttctctt 25562002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 25567495 - 25567552
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||| ||| |||| | |||||| |||| | |||||||||||||||    
T  25567495 aatgtgagtatgagagataaagttgtacaaaaatggttgtacgaatatcatttctctt 25567552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 26101459 - 26101516
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||| ||| ||||   ||||||||||| | |||||||||||||||    
T  26101459 aatgtgagtatgagagataaagttgtataaaaatgattgtacgaatatcatttctctt 26101516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 2777320 - 2777352
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaa 62  Q
    ||||||||||||||||||||||||||| |||||    
T  2777320 aatgtgagtatgagagagaaaattgttgcaaaa 2777352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 11742976 - 11743012
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  11742976 agtaaaaatataatgtgagtatgagagaaaaaattgt 11743012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 12044409 - 12044373
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  12044409 agtaaaaatataatgtgagtatgagagagaaagttgt 12044373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 14986737 - 14986781
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa 62  Q
    ||||||||| | | ||||||||||||||||||||||||| |||||    
T  14986737 aagtaaaaaaatagtgtgagtatgagagagaaaattgttgcaaaa 14986781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 16368039 - 16368083
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa 62  Q
    ||||||||||| ||||||||||||||| ||||| ||||| |||||    
T  16368039 aagtaaaaatataatgtgagtatgagaaagaaagttgttacaaaa 16368083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 24437507 - 24437451
Alignment:
Q  33 gtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttta 89  Q
    ||||||||||||||||||||| |  |||||| ||||  ||||||| |||||||||||    
T  24437507 gtgagtatgagagagaaaattatcacaaaataattgcacaaatataatttctcttta 24437451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 30945880 - 30945821
Alignment:
Q  30 aatgtgagtatgagag--agaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||  ||||| ||||  ||||||||||||  ||||||||||||||||    
T  30945880 aatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctctt 30945821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 34490424 - 34490388
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  34490424 agtaagaatataatgtgagtatgagagagaaaattgt 34490388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 32732123 - 32732180
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||||||| |||| | ||||||||||| ||||||| |||||||||    
T  32732123 aatgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatataatttctctt 32732180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 372716 - 372783
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||  |||||||||||||||||||| ||||  ||||||| |||| |||| |||||||||||||    
T  372716 taaaaatatcatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaaaatcatttctcttt 372783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 5007727 - 5007794
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||| ||||| || |||||| ||||||||||||  ||||||  |||||||||||||||||||||||    
T  5007727 taaaaacacaatatgtgtatgaaagagaaaattgtcacaaaattgttgttcaaatatcatttctcttt 5007794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 6865781 - 6865848
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    ||||||||||  |||||||||||||||||||| ||||  |||| || |||| ||||||||||||||||    
T  6865781 agtaaaaatattatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctct 6865848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 34270414 - 34270336
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||  ||||||||| | |||| |||||||||||||||||||||  |||| ||  ||||||||||||||||||||||    
T  34270414 agagagataaagtaaaaa-ataatgggagtatgagagagaaaattgtcacaaagtggatgttcaaatatcatttctcttt 34270336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 4434537 - 4434479
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||||| ||||||||   |||||| |||| ||||||||||||||||||    
T  4434537 aatgtgagtatgagagaaaaaattgtcaaaaaatggttgtacaaatatcatttctcttt 4434479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 7080596 - 7080546
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcat 80  Q
    ||||||||||||||||||||| |||| | ||||||||||| ||||||||||    
T  7080596 aatgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatatcat 7080546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 12203213 - 12203155
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||| |||||||||||| |||| | |||||| |||| ||||||||||||||||||    
T  12203213 aatgtgagcatgagagagaaagttgtacaaaaatggttgtacaaatatcatttctcttt 12203155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 14206455 - 14206397
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||||||||| ||||   |||||| |||| ||||||||||||||||||    
T  14206455 aatgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctcttt 14206397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 24486944 - 24486894
Alignment:
Q  37 gtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||||||| |||||||||| | ||||| |||||||||||||||||||||||    
T  24486944 gtatgagaaagaaaattgtacaaaaattattgttcaaatatcatttctctt 24486894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 3640201 - 3640258
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||||||| ||||  ||||||   |||||||||||||||||||||    
T  3640201 aatgtgagtatgagagagaaagttgtctcaaaatagatgttcaaatatcatttctctt 3640258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 13734354 - 13734423
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||| |||| ||||||||||||||||||||| ||||   ||| || |||| ||||||||||||||||||    
T  13734354 agtaagaatataatgtgagtatgagagagaaagttgtcataaagtggttgtacaaatatcatttctcttt 13734423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 38036777 - 38036712
Alignment:
Q  20 gtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||||||| ||||| |||||||||||| ||||   |||||| ||||| ||||||||||||||    
T  38036777 gtaaaaatacaacgtgagcatgagagagaaagttgtcgtaaaatggttgtttaaatatcatttctc 38036712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 1839349 - 1839401
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcattt 82  Q
    ||||||||||||||||||||| ||||  |||||||  ||||||||||||||||    
T  1839349 aatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 1839401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 8442234 - 8442170
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||| | ||||||| ||||||||||||| |||| | ||||| ||||| |||||||||||||||    
T  8442234 taaaaagataatgtgaatatgagagagaaagttgtacaaaaataattgtacaaatatcatttctc 8442170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 9226387 - 9226310
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||||  |||||||||||  |||||||||||||||||||| ||||    |||||  ||||||||||||||||||||||    
T  9226387 agagagataaagtaaaaata--atgtgagtatgagagagaaagttgtcattaaatggatgttcaaatatcatttctcttt 9226310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 14923135 - 14923080
Alignment:
Q  32 tgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||||||| ||||   |||||| |||||||||||||||||||||||    
T  14923135 tgtgagtatgagagagaaagttgtaa-aaaatggttgttcaaatatcatttctcttt 14923080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 42267433 - 42267357
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||  ||||||||||| |||||| |||||||||| ||| ||||  | |||||| || ||||||||||||||||    
T  42267433 agagagataaagtaaaaatataatgtgtgtatgagagaaaaagttgtcactaaatgaatgatcaaatatcatttctc 42267357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 14011350 - 14011315
Alignment:
Q  52 ttgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||| ||||||||||||||||||||||||||||||    
T  14011350 ttgttacaaaatgattgttcaaatatcatttctctt 14011315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 22098343 - 22098297
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||||| ||||||||||||||||||||| ||||    
T  22098343 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgt 22098297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 33037607 - 33037561
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||| ||||||||| | ||||||||||||||||||||| ||||    
T  33037607 agagagaaaaagtaaaaagataatgtgagtatgagagagaaagttgt 33037561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 33567228 - 33567286
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||||||||| ||||  |||| || |||| |||||||||||| |||||    
T  33567228 aatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttgtcttt 33567286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 40829502 - 40829456
Alignment:
Q  9 agagagaagaagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    |||||||  ||||||||||| ||||||||||||||||| ||||||||    
T  40829502 agagagataaagtaaaaatataatgtgagtatgagagaaaaaattgt 40829456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 42509684 - 42509614
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||| |||| ||| | ||||||||||| ||| ||||   |||||||||||| |||||||||||||||||    
T  42509684 aagtaagaatataatataagtatgagagaaaaatttgtcataaaatgattgttaaaatatcatttctcttt 42509614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 9957206 - 9957263
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||| ||||| || | | ||||| ||||| |||||||||||||||||    
T  9957206 aatgtgagtatgagaaagaaagttctacaaaaataattgtacaaatatcatttctctt 9957263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 11878495 - 11878438
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||| |||||||| |   ||||| ||||| |||||||||||||||||    
T  11878495 aatgtgagtatgagatagaaaattatataaaaataattgtacaaatatcatttctctt 11878438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 22649654 - 22649691
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  22649654 aagtaaaaagataatgtgagtatgagagagaaaattgt 22649691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 27440547 - 27440518
Alignment:
Q  28 acaatgtgagtatgagagagaaaattgttc 57  Q
    ||||||||||||||||||||||||||||||    
T  27440547 acaatgtgagtatgagagagaaaattgttc 27440518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 88
Target Start/End: Original strand, 35075621 - 35075650
Alignment:
Q  59 aaaatgattgttcaaatatcatttctcttt 88  Q
    ||||||||||||||||||||||||||||||    
T  35075621 aaaatgattgttcaaatatcatttctcttt 35075650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 43153056 - 43153121
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    |||||| | ||||||| ||||||||||||| |||| | |||||  |||| ||||||||||||||||    
T  43153056 taaaaagataatgtgaatatgagagagaaagttgtacaaaaattgttgtacaaatatcatttctct 43153121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 7076613 - 7076641
Alignment:
Q  59 aaaatgattgttcaaatatcatttctctt 87  Q
    |||||||||||||||||||||||||||||    
T  7076613 aaaatgattgttcaaatatcatttctctt 7076641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 8675437 - 8675469
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaa 62  Q
    ||||||||||||||||||||||||||| |||||    
T  8675437 aatgtgagtatgagagagaaaattgttgcaaaa 8675469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 27546089 - 27546061
Alignment:
Q  59 aaaatgattgttcaaatatcatttctctt 87  Q
    |||||||||||||||||||||||||||||    
T  27546089 aaaatgattgttcaaatatcatttctctt 27546061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 30334762 - 30334826
Alignment:
Q  21 taaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||| || ||||||||||||| ||||||||||||   ||| || |||| |||||||||||||||    
T  30334762 taaaagtataatgtgagtatgaaagagaaaattgtcataaagtggttgtacaaatatcatttctc 30334826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 31626110 - 31626150
Alignment:
Q  48 aaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||||| | ||||||||||||| ||||||||||||||||||    
T  31626110 aaaattataccaaaatgattgtacaaatatcatttctcttt 31626150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 36624395 - 36624359
Alignment:
Q  19 agtaaaaatacaatgtgagtatgagagagaaaattgt 55  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  36624395 agtaagaatataatgtgagtatgagagagaaaattgt 36624359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 40201125 - 40201181
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctct 86  Q
    ||||||| |||||||||||| ||||| | |||||| ||||  |||||||||||||||    
T  40201125 aatgtgactatgagagagaatattgtacaaaaatggttgtataaatatcatttctct 40201181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 41865612 - 41865676
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcattt 82  Q
    ||||||||||| ||||||||||||| ||| ||||||||  ||||||  ||||  |||||||||||    
T  41865612 aagtaaaaatataatgtgagtatgaaagataaaattgtcacaaaatagttgtataaatatcattt 41865676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 18652 - 18707
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    ||||| ||||||||||||||||||||  |||| ||||||| |||||||||||||||    
T  18652 aatgtaagtatgagagagaaaattgtcacaaattgattgtacaaatatcatttctc 18707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 17104 - 17046
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctcttt 88  Q
    |||| |||||||||||| ||| |||| | |||||| |||| ||||||||||||||||||    
T  17104 aatgcgagtatgagagataaagttgtacaaaaatggttgtacaaatatcatttctcttt 17046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 31605 - 31662
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    ||||||||||||||||||||| ||||   |||||| |||| |||||||||||||||||    
T  31605 aatgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctctt 31662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 44840 - 44784
Alignment:
Q  31 atgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||| ||||||||||||||| ||||  |||||||  |||||||||||||||||||||    
T  44840 atgtaagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 44784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 121714 - 121670
Alignment:
Q  18 aagtaaaaatacaatgtgagtatgagagagaaaattgttccaaaa 62  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||||    
T  121714 aagtaaaaatataatgtgagtatgagagaaaaaattgttacaaaa 121670  T

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Target: scaffold0276 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 1711 - 1656
Alignment:
Q  30 aatgtgagtatgagagagaaaattgttccaaaatgattgttcaaatatcatttctctt 87  Q
    |||| |||||||||||||||||||||  |||||   ||||||||||||||||||||||    
T  1711 aatgagagtatgagagagaaaattgtcacaaaag--ttgttcaaatatcatttctctt 1656  T

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Target: scaffold0201 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 8509 - 8472
Alignment:
Q  48 aaaattgttccaaaatgattgttcaaatatcatttctc 85  Q
    |||||||||  |||||||||||||||||||||||||||    
T  8509 aaaattgttaaaaaatgattgttcaaatatcatttctc 8472  T

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Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 22605 - 22572
Alignment:
Q  58 caaaatgattgttcaaatatcatttctctttatt 91  Q
    |||||||| |||||||||||||||||||||||||    
T  22605 caaaatgaatgttcaaatatcatttctctttatt 22572  T

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Target: scaffold0257 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 91
Target Start/End: Complemental strand, 24007 - 23975
Alignment:
Q  59 aaaatgattgttcaaatatcatttctctttatt 91  Q
    |||||| ||||||||||||||||||||||||||    
T  24007 aaaatggttgttcaaatatcatttctctttatt 23975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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