View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14491_low_3 (Length: 292)
Name: NF14491_low_3
Description: NF14491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14491_low_3 |
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Alignment Details
Target: chr5 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 16 - 281
Target Start/End: Original strand, 8910292 - 8910557
Alignment:
| Q |
16 |
agtatttggacgaaaaatttgaatcaacaaagaatatggccttacccataatttcattatgcttcaatgaatggaccagctctaagtgttgcatacatat |
115 |
Q |
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| T |
8910292 |
agtatttggacgaaaaatttgaatcaacaaagaatatggccttacccataatttcattatgcttcaatgaatggaccaactctaagtgttgcatacatat |
8910391 |
T |
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| Q |
116 |
catgatcccaatcatctttataaattttattaaatcgtaatttccttcaaaattgaactgcacataataacaaaaaattgttagcaatagcttattacaa |
215 |
Q |
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| T |
8910392 |
catgatcccaatcatctttataaattttattaaatcgtaatttccttcaaaattgaactgcacataataacaaaaaattgttagcaatagcttattacaa |
8910491 |
T |
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| Q |
216 |
tccaagtaaatatatcaaatttggtcttaaaagatatgcagacattacatggccatgcacaggttc |
281 |
Q |
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| T |
8910492 |
tccaagtaaatatatcaaatttggtcttaaaagatatgcagacattacatggccatgcacaggttc |
8910557 |
T |
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