View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14492_high_28 (Length: 316)
Name: NF14492_high_28
Description: NF14492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14492_high_28 |
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Alignment Details
Target: chr5 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 19 - 301
Target Start/End: Complemental strand, 881329 - 881046
Alignment:
| Q |
19 |
aattctatcaagaggtaaccactcatcacataacaacttatttgtctcaattaaaattcacatgtttggaattttt-attgtatgattttcagatatttg |
117 |
Q |
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| T |
881329 |
aattctatcaagaggtaaccactgatcacataacaacttgtttgtctcaatcaaaattcacatatttggaattttttattgtatgattttcagatatttg |
881230 |
T |
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| Q |
118 |
gatttgaagaagtagaaagccccaagttcggagagtttaaggttgtatggctacgtgttccatcttcttccttatatcttcacctcatcgagcgcaaccc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
881229 |
gatttgaagaagtagaaagccccaagttcggagagtttaaggttgtatggctacgtgttccatcttcttcattatatcttcacctcatcgagcgcaaccc |
881130 |
T |
|
| Q |
218 |
atctaacaatctccctgaaggtccatggagtgccacctctcctgttaaagacccttcccatcttcctagaggccatcatctctg |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
881129 |
atctaacaatctccctgaaggtccatggagtgccacctctcctgttaaagacccttcccatcttcctagaggccatcatctctg |
881046 |
T |
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