View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14492_low_13 (Length: 463)
Name: NF14492_low_13
Description: NF14492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14492_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 428; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 3 - 445
Target Start/End: Original strand, 18820598 - 18821041
Alignment:
| Q |
3 |
acactggtatttgctgctaccactattagct-acttatctttatcagctttctttccaatccatccagctacgattggggtaagagctaccgtaggtgga |
101 |
Q |
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| T |
18820598 |
acactggtatttgctgctaccactattagcttacttatctttatcagctttctttccaatccatccagctacgattggggtaagagctaccgtaggtgga |
18820697 |
T |
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| Q |
102 |
aacctaattggagatgcagctttgtgtgcagcatatgccaaagcaaaggtaccgactttttcgccggttgcatcagtactgattcctacctgcagatata |
201 |
Q |
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| T |
18820698 |
aacctaattggagatgcagctttgtgtgcagcatatgccaaagcaaaggtaccgactttttcgccggttgcatcagtactgattcctacctgcagatata |
18820797 |
T |
|
| Q |
202 |
cagacataatgtgttaattcatagaagttattttgttttcattatacttcaatccacatttgggttatgtatgaggattgcaccttctgaagcaaagttt |
301 |
Q |
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| T |
18820798 |
cagacataatgtgttaattcatagaagttattttgttttcattatacttcaatccacatttgggttatgtatgagcattgcaccttctgaagcaaagttt |
18820897 |
T |
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| Q |
302 |
gaacatctactccagcattgattaatacataacaaagagcgaaagagatcaatgacagagtaatggaggtggctaagtatgctcctccgtattttgccag |
401 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18820898 |
gaacatctactccagcattgattaatacataacaaagagcgaaagagatcaatgacagagtaatggaggtggctaagtatgctcctccgtattttgccag |
18820997 |
T |
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| Q |
402 |
caactccttggcttgatcaccttttgatttctgttgttcccctt |
445 |
Q |
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| T |
18820998 |
caactccttggcttgatcaccttttgatttctgttggtcccctt |
18821041 |
T |
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