View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14492_low_44 (Length: 255)
Name: NF14492_low_44
Description: NF14492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14492_low_44 |
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Alignment Details
Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 43472693 - 43472452
Alignment:
| Q |
1 |
catcacaaatgtttgcatattctttgtttatattctcctcagttatcacctcaataacacgtttctcttcctccaaagcaacctcattttcagattccat |
100 |
Q |
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| T |
43472693 |
catcacaaatgtttgcatattctttgtttatattctcctcagttatcacctcaataacacgtttctcttcctccaaagcaacctcattttcagattccat |
43472594 |
T |
|
| Q |
101 |
tttgctttaacaatatacaaagtaaattcaaatttaagaatattcacctgtataaaatagatatatttctctcagtttcttggatactttagcaactatc |
200 |
Q |
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|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43472593 |
tttgctttaacaatatacaa-gtaaattcaaatttaagaatattcacctgtataaaatagatatatttctctcagtttcttggatactttagcaactatc |
43472495 |
T |
|
| Q |
201 |
ataaacagaaaaccaaatataatttgcacatttcatcaatatt |
243 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||| |
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| T |
43472494 |
ataaacagaaaaccaaatataattggcacatttcatcaatatt |
43472452 |
T |
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