View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14493_high_10 (Length: 512)
Name: NF14493_high_10
Description: NF14493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14493_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 464; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 18 - 505
Target Start/End: Original strand, 38928883 - 38929370
Alignment:
| Q |
18 |
caaacctcattgttgatattattctttcattgccacttctatatgggacataaaatggtcaccttgaaatatgtttaccataatacctttttctttcttc |
117 |
Q |
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| T |
38928883 |
caaacctcattgttgatattattctttcattgccacttctatatgggacataaaattgtcaccttgaaatatgtttaccataatacctttttctttcttc |
38928982 |
T |
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| Q |
118 |
ttattttggctaaggacacgttatttgtaccttgtcattaaaatgttgtgcaccacgaaagtgtattttatggaaatgaaaaccaagtgaagatggtctt |
217 |
Q |
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| T |
38928983 |
ttattttggctaaggacacgttatttgtaccttgtcattaaaatgttgtgcaccacgaaagtgtattttatggaaatgaaaaccaagtgaagatggtctt |
38929082 |
T |
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| Q |
218 |
taattttaacctaaaagttgaagacttttagcataaagtttatttaatttgaagatgattgcgtcataggtttgtttcattaggtatgggaatatgcgta |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
38929083 |
taattttaacctaaaagttgaagacttttagcataaagtttatttaatttgaagatgattgcgtcacaggtttgtttcattaggtatgggaatatgcgta |
38929182 |
T |
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| Q |
318 |
tggcattgaattcattcatgagctgtgtttttcatatttagaaacaatgttgtgcaaatcaacctttgatggattaaataatcatgtattttgggatgat |
417 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
38929183 |
tggcattgaattcattcatgagctgtgtttttcatatttagaaacaatgttgtgcaaatcaacctttgatggattaaataatcgtgtattttgggatgat |
38929282 |
T |
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| Q |
418 |
gtgaagatatatgtagcattaaaggggaagcatgaagtaatttacacttttcatcgattcctaattatttcaactcaatcggcctatg |
505 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
38929283 |
atgaagatatatctagcattaaaggggaagcatgaagtaatttacacttttcatcgattcctaattatttcaactcaatcagcctatg |
38929370 |
T |
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