View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14493_low_13 (Length: 446)

Name: NF14493_low_13
Description: NF14493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14493_low_13
NF14493_low_13
[»] chr8 (5 HSPs)
chr8 (15-429)||(29115258-29115665)
chr8 (16-266)||(24423256-24423497)
chr8 (15-75)||(9818241-9818301)
chr8 (15-75)||(21231912-21231972)
chr8 (15-75)||(9881119-9881179)
[»] chr7 (7 HSPs)
chr7 (13-311)||(31211120-31211411)
chr7 (46-344)||(46002473-46002764)
chr7 (15-118)||(46002764-46002867)
chr7 (16-75)||(8311763-8311822)
chr7 (29-80)||(9745169-9745220)
chr7 (15-75)||(10530204-10530264)
chr7 (15-75)||(29587606-29587666)
[»] chr3 (4 HSPs)
chr3 (17-123)||(11650541-11650647)
chr3 (25-92)||(19544707-19544773)
chr3 (16-75)||(52641395-52641454)
chr3 (29-75)||(29453693-29453738)
[»] chr1 (3 HSPs)
chr1 (13-73)||(24304411-24304471)
chr1 (15-75)||(51443589-51443649)
chr1 (15-75)||(31654638-31654698)
[»] chr2 (3 HSPs)
chr2 (16-70)||(22403780-22403834)
chr2 (15-75)||(27977214-27977274)
chr2 (15-75)||(28063742-28063802)
[»] chr5 (2 HSPs)
chr5 (187-343)||(18926891-18927046)
chr5 (13-54)||(18927186-18927227)
[»] scaffold0022 (1 HSPs)
scaffold0022 (15-75)||(2054-2114)
[»] scaffold0259 (1 HSPs)
scaffold0259 (16-75)||(2566-2625)
[»] scaffold0016 (1 HSPs)
scaffold0016 (15-75)||(107887-107947)
[»] chr4 (1 HSPs)
chr4 (15-75)||(41943081-41943141)


Alignment Details
Target: chr8 (Bit Score: 320; Significance: 1e-180; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 15 - 429
Target Start/End: Complemental strand, 29115665 - 29115258
Alignment:
Q  15 atgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa-gatatgaattattattaatagatataacaatttttgtt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| |||||    
T  29115665 atgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaaagatattaattattattaataaatataacaattgttgtt 29115566  T
Q  114 tagtaattttgttnnnnnnnttgattttgtagaataggtgaattttgataacattatacgtatgattgttgatttgtggaattggtaatttgttgattta 213  Q
    |||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29115565 tagtaattttgttaaaaaaattgattttgttgaataggtgaattttgataacattatacgtatgattgttgatttgcggaattggtaatttgttgattta 29115466  T
Q  214 tatatatgattgttgatatgtgaaattgagaattttattgatttcaagtgactttccgttaattttatctttagatgtttaaagaaattttattaattat 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29115465 tatatatgattgttgatatgtgaaattgagaattttattgatttcaagtgactttccgttgattttatctttagatgtttaaagaaattttattaattat 29115366  T
Q  314 gaggagtttgtgattttatggaattgataaggtggtttgtgagtataaaactacaagatttaaggaaagattacattgcatgcataa-attgcatataaa 412  Q
    |||||||||||||||||||||||||||||||||||||| ||||         ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29115365 gaggagtttgtgattttatggaattgataaggtggtttctgag---------acaagatttaaggaaagattacattgcatgcataacattgcatataaa 29115275  T
Q  413 gcatagcatataatagt 429  Q
    |||||||||||||||||    
T  29115274 gcatagcatataatagt 29115258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 266
Target Start/End: Original strand, 24423256 - 24423497
Alignment:
Q  16 tgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaagatatgaattattattaatagatataacaatttttgttta 115  Q
    |||||||  ||| ||||||||||||||||  |||||||| | ||||  |||||||||||||| || |||  ||||||||| |||||| |||| |||||||    
T  24423256 tgaaaatgatagtttatgatattgaattttgtatgcttctt-attcattggatgagtgaagagattaatggttattaataaatataataattgttgttta 24423354  T
Q  116 gtaa-ttttgttnnnnnnnttgattttgtagaataggtgaattttgataacattatacgtatgattgttgatttgtggaattggtaatttgttgatttat 214  Q
    |||| |||||||       |||| || | |||||| ||||||||||||||  ||||| ||||||||| | | ||| | ||||||||||||||||||  ||    
T  24423355 gtaaattttgtta------ttgaatt-gaagaatatgtgaattttgataa--ttataagtatgattgattagttgcgaaattggtaatttgttgatcgat 24423445  T
Q  215 atatatgattgttgatatgtgaaattgagaattttattgatttcaagtgact 266  Q
     |||||||||||| ||||| | ||||| || |||||||||||| | ||||||    
T  24423446 gtatatgattgttaatatgcggaattgtgatttttattgatttaatgtgact 24423497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 9818301 - 9818241
Alignment:
Q  15 atgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa 75  Q
    ||||||||  ||| ||||||| |||||||||||||||||| |||||  |||||||||||||    
T  9818301 atgaaaatgatagattatgatgttgaatttgatatgcttcttgatttaatggatgagtgaa 9818241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 21231972 - 21231912
Alignment:
Q  15 atgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa 75  Q
    ||||||||  ||| ||||||| |||||||||||||||||| |||||  |||||||||||||    
T  21231972 atgaaaatgatagattatgatgttgaatttgatatgcttcttgatttaatggatgagtgaa 21231912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 9881119 - 9881179
Alignment:
Q  15 atgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa 75  Q
    ||||||||| ||| ||||||| || ||||||||||||||   ||||| |||||||||||||    
T  9881119 atgaaaataatagattatgatcttaaatttgatatgcttatcgattcaatggatgagtgaa 9881179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 7e-56; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 13 - 311
Target Start/End: Original strand, 31211120 - 31211411
Alignment:
Q  13 agatgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaagatatgaattattattaatagatataacaatttttgt 112  Q
    ||||||||||| |||||||||||||| ||||||||||||||| |||||  || |||| ||||||| || |||| ||||||||| |||||| |||| ||||    
T  31211120 agatgaaaataataggttatgatattaaatttgatatgcttcttgatttaatagatgcgtgaagagattaattcttattaataaatataagaattgttgt 31211219  T
Q  113 ttagtaa-ttttgttnnnnnnnttgattttgtagaataggtgaattttgataacattatacgtatgattgttgatttgtggaattggtaatttgttgatt 211  Q
    ||||||| |||||||       ||||||||  |||||| ||||||||||||||  |||||| |||||||| |   ||||| |||||||||||||||||||    
T  31211220 ttagtaaattttgtta------ttgattttaaagaatatgtgaattttgataa--ttatacttatgattgatttgttgtgaaattggtaatttgttgatt 31211311  T
Q  212 tatatatatgattgttgatatgtgaaattgagaattttattgatttcaagtgactttccgttaattttatctttagatgtttaaagaaattttattaatt 311  Q
     || |||||||||||||||||||||||||| | |||||| |||||| | |||||| | |||| ||||| |||||||| ||||  ||||||||||||||||    
T  31211312 gatgtatatgattgttgatatgtgaaattgtggattttagtgatttaaggtgactcttcgttgattttgtctttagaggttttgagaaattttattaatt 31211411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 46 - 344
Target Start/End: Complemental strand, 46002764 - 46002473
Alignment:
Q  46 atatgcttcatgattcgatggatgagtgaagatatgaattattattaatagatataacaatttttgtttagtaatttt-gttnnnnnnnttgattttgta 144  Q
    ||||||||| |||||| || |||||||||| | || |||| ||||||||| |||||| |||| ||| ||||||||||| |||       ||||||||| |    
T  46002764 atatgcttcttgattctattgatgagtgaaaagattaattgttattaataaatataagaattgttggttagtaatttttgtta------ttgattttgaa 46002671  T
Q  145 gaataggtgaattttgataacattatacgtatgattgttgatttgtggaattggtaatttgtt-gatttatatatatgattgttgatatgtgaaattgag 243  Q
    ||||| ||||||||||||||  ||||| ||||||||| | | ||||| ||||||||||||||| ||||||| |||||||||||||||| |||||||||      
T  46002670 gaatatgtgaattttgataa--ttatatgtatgattgattagttgtgaaattggtaatttgtttgatttatgtatatgattgttgatacgtgaaattgta 46002573  T
Q  244 aattttattgatttcaagtgactttccgttaattttatctttagatgtttaaagaaattttattaattatgaggagtttgtgattttatggaattgataa 343  Q
    ||||||||||||   | |||||| |  ||| ||||| || | ||| ||||  |||||||||||||||| ||||| ||| |||||||| |||| |||||||    
T  46002572 aattttattgataaaaggtgactctttgttgattttgtcctcagaggttttgagaaattttattaatt-tgaggtgttggtgattttgtggagttgataa 46002474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 46002867 - 46002764
Alignment:
Q  15 atgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaagatatgaattattattaatagatataacaatttttgttt 114  Q
    ||||||||| |||||| ||||||||||||||||||||||| |||||| ||||||||||||| | || |||| ||||||||| |||||| |||| ||| ||    
T  46002867 atgaaaataataggttgtgatattgaatttgatatgcttcttgattcaatggatgagtgaaaagattaattgttattaataaatataagaattgttggtt 46002768  T
Q  115 agta 118  Q
    ||||    
T  46002767 agta 46002764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 8311763 - 8311822
Alignment:
Q  16 tgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa 75  Q
    |||||||| ||| ||||||| |||||||||| ||||||| |||||||||||||| |||||    
T  8311763 tgaaaataatagattatgatgttgaatttgacatgcttcttgattcgatggatgggtgaa 8311822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 9745169 - 9745220
Alignment:
Q  29 ttatgatattgaatttgatatgcttcatgattcgatggatgagtgaagatat 80  Q
    ||||||| |||||||||||||||||| |||||| ||||||||||||| ||||    
T  9745169 ttatgatgttgaatttgatatgcttcttgattcaatggatgagtgaaaatat 9745220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 10530264 - 10530204
Alignment:
Q  15 atgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa 75  Q
    ||||||||  ||| ||||||| |||||||||||||||||| |||||  |||||||||||||    
T  10530264 atgaaaatgatagattatgatgttgaatttgatatgcttcttgatttaatggatgagtgaa 10530204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 29587606 - 29587666
Alignment:
Q  15 atgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa 75  Q
    ||||||||  ||| ||||||| |||||||||||||||||| |||||  |||||||||||||    
T  29587606 atgaaaatgatagattatgatgttgaatttgatatgcttcttgatttaatggatgagtgaa 29587666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 11650647 - 11650541
Alignment:
Q  17 gaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaagatatgaattattattaatagatataacaatttttgtttag 116  Q
    ||||||| | |||| ||||||||||||||||||||||| |||||| || ||||||| |||| || |||| ||||||||| |||||| |||| ||||||||    
T  11650647 gaaaataattggttgtgatattgaatttgatatgcttcttgattcaattgatgagttaagacattaattgttattaataaatataagaattgttgtttag 11650548  T
Q  117 taatttt 123  Q
    |||||||    
T  11650547 taatttt 11650541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 19544773 - 19544707
Alignment:
Q  25 taggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaagatatgaattattatta 92  Q
    ||||||||||| ||||||| |||||||||  |||||||||||||||||||| | ||  ||||||||||    
T  19544773 taggttatgatgttgaatt-gatatgcttattgattcgatggatgagtgaaaagatttattattatta 19544707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 52641454 - 52641395
Alignment:
Q  16 tgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa 75  Q
    |||||||  ||| ||||||| |||||||||||||||||| ||| || |||||||||||||    
T  52641454 tgaaaatgatagattatgatgttgaatttgatatgcttcttgactcaatggatgagtgaa 52641395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 29453693 - 29453738
Alignment:
Q  29 ttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa 75  Q
    |||||| ||||||||||||||||||| |||||| |||||||||||||    
T  29453693 ttatgacattgaatttgatatgcttcttgattc-atggatgagtgaa 29453738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 24304471 - 24304411
Alignment:
Q  13 agatgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtg 73  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||||    
T  24304471 agatgaaaataataggttatgatattggatttgatatgcttcatgattctatcgatgagtg 24304411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 51443649 - 51443589
Alignment:
Q  15 atgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa 75  Q
    ||||||||  ||| ||||||| |||||||||||||||||| |||||  |||||||||||||    
T  51443649 atgaaaatgatagattatgatgttgaatttgatatgcttcttgatttaatggatgagtgaa 51443589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 31654698 - 31654638
Alignment:
Q  15 atgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa 75  Q
    ||||||||  ||| ||||||| ||| |||||||||||||| |||||  |||||||||||||    
T  31654698 atgaaaatgatagattatgatgttggatttgatatgcttcttgatttaatggatgagtgaa 31654638  T

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Target: chr2 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 22403780 - 22403834
Alignment:
Q  16 tgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatga 70  Q
    |||||||| ||| ||||||| |||||||||||||||||| |||||||||||||||    
T  22403780 tgaaaataatagattatgatgttgaatttgatatgcttcttgattcgatggatga 22403834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 27977274 - 27977214
Alignment:
Q  15 atgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa 75  Q
    ||||||||  ||| ||||||| |||||||||||||||||| |||||  |||||||||||||    
T  27977274 atgaaaatgatagattatgatgttgaatttgatatgcttcttgatttaatggatgagtgaa 27977214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 28063802 - 28063742
Alignment:
Q  15 atgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa 75  Q
    ||||||||  ||| ||||||| |||||||||||||||||| |||||  |||||||||||||    
T  28063802 atgaaaatgatagattatgatgttgaatttgatatgcttcttgatttaatggatgagtgaa 28063742  T

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Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 343
Target Start/End: Complemental strand, 18927046 - 18926891
Alignment:
Q  187 ttgtggaattggtaatttgttgatttatatatatgattgttgatatgtgaaattgagaattttattgatttcaagtgactttccgttaattttat-cttt 285  Q
    ||||| |||||  ||||||||||||||||||   ||||||||||||||||||||  |||||| ||| |||| |||||||| | |||  ||||| |  |||    
T  18927046 ttgtgaaattgagaatttgttgatttatatag--gattgttgatatgtgaaatttggaatttgattaatttaaagtgactcttcgtggattttgtaattt 18926949  T
Q  286 agatgtttaaagaaattttattaattatgaggagtttgtgattttatggaattgataa 343  Q
    |||| | | | ||||||||| ||||||||| |  || || ||||| ||||||||||||    
T  18926948 agatatcttatgaaattttagtaattatgaagttttagtaattttgtggaattgataa 18926891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 18927227 - 18927186
Alignment:
Q  13 agatgaaaatagtaggttatgatattgaatttgatatgcttc 54  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  18927227 agatgaaaataataggttatgaagttgaatttgatatgcttc 18927186  T

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Target: scaffold0022 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 2054 - 2114
Alignment:
Q  15 atgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa 75  Q
    ||||||| | ||| ||||||| |||||||||||||||||| |||||  |||||||||||||    
T  2054 atgaaaacaatagattatgatgttgaatttgatatgcttcttgatttaatggatgagtgaa 2114  T

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Target: scaffold0259 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 2625 - 2566
Alignment:
Q  16 tgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa 75  Q
    |||||||  ||||||||||| |||||||||| ||||||| |||||  |||||||||||||    
T  2625 tgaaaatgataggttatgatgttgaatttgacatgcttcttgatttaatggatgagtgaa 2566  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 107887 - 107947
Alignment:
Q  15 atgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa 75  Q
    ||||||||  ||| ||||||| |||||||||||||||| | |||||  |||||||||||||    
T  107887 atgaaaatgatagattatgatgttgaatttgatatgctccttgatttaatggatgagtgaa 107947  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 41943141 - 41943081
Alignment:
Q  15 atgaaaatagtaggttatgatattgaatttgatatgcttcatgattcgatggatgagtgaa 75  Q
    ||||||||  ||| ||||| | |||||||||||||||||| |||||  |||||||||||||    
T  41943141 atgaaaatgatagattatgttgttgaatttgatatgcttcttgatttaatggatgagtgaa 41943081  T

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