View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14493_low_23 (Length: 360)

Name: NF14493_low_23
Description: NF14493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14493_low_23
NF14493_low_23
[»] chr6 (55 HSPs)
chr6 (192-353)||(7248146-7248307)
chr6 (1-161)||(7248329-7248489)
chr6 (2-125)||(16766704-16766827)
chr6 (1-133)||(9629382-9629514)
chr6 (2-125)||(9107299-9107422)
chr6 (1-125)||(34073277-34073399)
chr6 (2-133)||(8365448-8365579)
chr6 (2-111)||(18367857-18367966)
chr6 (2-121)||(10339054-10339174)
chr6 (3-126)||(31384926-31385048)
chr6 (2-73)||(34595182-34595253)
chr6 (1-111)||(16488518-16488628)
chr6 (2-133)||(17327590-17327715)
chr6 (2-111)||(8714001-8714110)
chr6 (1-73)||(28152146-28152218)
chr6 (5-73)||(32978842-32978910)
chr6 (2-125)||(10294114-10294237)
chr6 (2-124)||(5970037-5970159)
chr6 (3-69)||(17841530-17841596)
chr6 (69-125)||(9025490-9025546)
chr6 (81-133)||(19040351-19040403)
chr6 (3-55)||(31959216-31959268)
chr6 (2-124)||(32839571-32839697)
chr6 (2-73)||(7378027-7378098)
chr6 (2-73)||(13364645-13364716)
chr6 (81-131)||(7265601-7265651)
chr6 (47-125)||(9195728-9195806)
chr6 (3-72)||(9658928-9658998)
chr6 (83-133)||(13360382-13360432)
chr6 (64-125)||(26562696-26562757)
chr6 (71-131)||(7151413-7151473)
chr6 (69-133)||(9027177-9027241)
chr6 (1-73)||(24645529-24645601)
chr6 (47-107)||(34868760-34868820)
chr6 (2-73)||(4877991-4878061)
chr6 (66-125)||(6665220-6665279)
chr6 (2-61)||(8776908-8776967)
chr6 (57-124)||(9617442-9617509)
chr6 (2-133)||(10842531-10842652)
chr6 (2-73)||(28715343-28715414)
chr6 (73-132)||(32511666-32511725)
chr6 (63-125)||(7723240-7723302)
chr6 (5-51)||(8389411-8389457)
chr6 (5-51)||(9025448-9025494)
chr6 (81-131)||(30866152-30866202)
chr6 (2-51)||(7938170-7938219)
chr6 (2-111)||(17435220-17435329)
chr6 (7-60)||(24831869-24831922)
chr6 (81-125)||(7086802-7086846)
chr6 (85-133)||(9658878-9658926)
chr6 (68-132)||(10888969-10889033)
chr6 (47-111)||(11424685-11424749)
chr6 (81-133)||(13851735-13851787)
chr6 (81-133)||(19044463-19044515)
chr6 (4-52)||(26178620-26178668)
[»] chr1 (66 HSPs)
chr1 (2-133)||(9828043-9828174)
chr1 (1-111)||(47989518-47989628)
chr1 (2-133)||(25361885-25362012)
chr1 (2-111)||(5944304-5944413)
chr1 (2-131)||(36905998-36906126)
chr1 (2-76)||(40917805-40917879)
chr1 (2-111)||(25934637-25934746)
chr1 (2-126)||(32461393-32461516)
chr1 (4-125)||(1486646-1486761)
chr1 (32-125)||(27471525-27471618)
chr1 (2-111)||(31694639-31694748)
chr1 (2-133)||(17754310-17754441)
chr1 (7-133)||(9629834-9629960)
chr1 (2-133)||(17831462-17831591)
chr1 (2-133)||(5898206-5898326)
chr1 (4-73)||(42359391-42359460)
chr1 (57-122)||(44482240-44482305)
chr1 (60-131)||(6427351-6427422)
chr1 (2-73)||(18337377-18337448)
chr1 (2-45)||(22881567-22881610)
chr1 (2-73)||(37598879-37598950)
chr1 (3-125)||(6414932-6415053)
chr1 (14-124)||(6612112-6612222)
chr1 (2-124)||(16164244-16164366)
chr1 (2-111)||(6427485-6427594)
chr1 (47-132)||(34371714-34371798)
chr1 (73-125)||(13436465-13436517)
chr1 (4-68)||(16297223-16297287)
chr1 (69-133)||(20157346-20157410)
chr1 (1-73)||(22515826-22515898)
chr1 (1-73)||(46348322-46348394)
chr1 (81-132)||(7918219-7918270)
chr1 (86-133)||(34298435-34298482)
chr1 (81-131)||(10233254-10233304)
chr1 (2-52)||(15765827-15765877)
chr1 (64-133)||(10572580-10572649)
chr1 (47-128)||(12713301-12713382)
chr1 (47-128)||(12717392-12717473)
chr1 (2-47)||(27965940-27965985)
chr1 (4-73)||(29163323-29163392)
chr1 (83-131)||(14332652-14332700)
chr1 (1-109)||(18556384-18556492)
chr1 (81-133)||(25098563-25098615)
chr1 (81-133)||(36878460-36878512)
chr1 (2-38)||(48450550-48450586)
chr1 (69-162)||(1704988-1705083)
chr1 (81-124)||(1864888-1864931)
chr1 (2-45)||(21365992-21366035)
chr1 (2-45)||(22947806-22947849)
chr1 (2-45)||(30359441-30359484)
chr1 (66-133)||(38503319-38503386)
chr1 (16-125)||(40181878-40181976)
chr1 (2-89)||(41597410-41597497)
chr1 (2-48)||(7918154-7918200)
chr1 (4-73)||(11412709-11412779)
chr1 (1-39)||(35702541-35702579)
chr1 (3-73)||(40258874-40258944)
chr1 (1-42)||(16812635-16812676)
chr1 (2-51)||(29144320-29144369)
chr1 (2-51)||(46940748-46940797)
chr1 (81-133)||(398773-398825)
chr1 (57-133)||(5376484-5376560)
chr1 (128-164)||(9630655-9630691)
chr1 (3-51)||(10577676-10577724)
chr1 (1-61)||(18190047-18190107)
chr1 (82-122)||(19324572-19324612)
[»] chr5 (51 HSPs)
chr5 (3-133)||(3966502-3966632)
chr5 (1-162)||(39698509-39698672)
chr5 (5-133)||(18592072-18592200)
chr5 (2-133)||(32766872-32767003)
chr5 (4-125)||(19579708-19579829)
chr5 (3-111)||(6401519-6401627)
chr5 (5-73)||(39268541-39268609)
chr5 (3-106)||(21542056-21542159)
chr5 (2-125)||(41091186-41091309)
chr5 (1-111)||(21814282-21814392)
chr5 (2-163)||(7677676-7677835)
chr5 (4-73)||(21190998-21191067)
chr5 (1-129)||(35017040-35017163)
chr5 (2-133)||(15410377-15410508)
chr5 (2-73)||(21576685-21576756)
chr5 (1-124)||(30098334-30098457)
chr5 (2-73)||(43564929-43565000)
chr5 (2-111)||(37328775-37328882)
chr5 (2-122)||(14873527-14873641)
chr5 (2-111)||(21522771-21522880)
chr5 (2-111)||(21533337-21533446)
chr5 (2-133)||(11685938-11686068)
chr5 (81-133)||(27144462-27144514)
chr5 (2-126)||(40131627-40131751)
chr5 (70-125)||(6471886-6471941)
chr5 (14-73)||(15382533-15382592)
chr5 (1-72)||(17123097-17123167)
chr5 (69-163)||(39205847-39205943)
chr5 (2-68)||(21194063-21194129)
chr5 (1-62)||(16304365-16304426)
chr5 (2-51)||(23289998-23290047)
chr5 (2-55)||(40000493-40000546)
chr5 (2-50)||(19820328-19820376)
chr5 (64-132)||(22423803-22423871)
chr5 (6-53)||(4105327-4105374)
chr5 (2-73)||(42893408-42893479)
chr5 (4-67)||(43001859-43001922)
chr5 (45-127)||(3751902-3751984)
chr5 (1-51)||(19429497-19429547)
chr5 (4-62)||(23015926-23015984)
chr5 (81-131)||(30502396-30502446)
chr5 (81-131)||(30542739-30542789)
chr5 (10-51)||(17088361-17088402)
chr5 (2-67)||(31084382-31084447)
chr5 (70-131)||(36838544-36838605)
chr5 (65-133)||(6035482-6035549)
chr5 (2-38)||(10298633-10298669)
chr5 (2-38)||(22423764-22423800)
chr5 (81-133)||(28588682-28588734)
chr5 (1-73)||(30098977-30099049)
chr5 (2-50)||(38464313-38464361)
[»] chr2 (45 HSPs)
chr2 (3-132)||(44860320-44860449)
chr2 (2-137)||(24975255-24975389)
chr2 (2-104)||(35056896-35056998)
chr2 (2-92)||(42511322-42511411)
chr2 (2-111)||(34784911-34785020)
chr2 (2-111)||(37419764-37419873)
chr2 (2-111)||(11223793-11223901)
chr2 (4-133)||(36756275-36756404)
chr2 (2-126)||(12668352-12668476)
chr2 (5-129)||(17776590-17776714)
chr2 (4-72)||(19942314-19942382)
chr2 (1-73)||(38117098-38117170)
chr2 (2-125)||(30717459-30717582)
chr2 (2-124)||(22084756-22084883)
chr2 (1-111)||(36096303-36096413)
chr2 (4-73)||(2438661-2438730)
chr2 (2-94)||(26769549-26769641)
chr2 (2-73)||(24009343-24009414)
chr2 (2-131)||(2331795-2331922)
chr2 (81-127)||(5367197-5367243)
chr2 (41-111)||(28524447-28524517)
chr2 (48-131)||(2665865-2665946)
chr2 (1-73)||(18840952-18841024)
chr2 (81-133)||(21616761-21616813)
chr2 (4-111)||(15657885-15657992)
chr2 (2-73)||(20242667-20242738)
chr2 (2-52)||(10535685-10535735)
chr2 (3-73)||(28596517-28596587)
chr2 (2-116)||(32749754-32749868)
chr2 (1-125)||(21782743-21782870)
chr2 (81-133)||(23718025-23718077)
chr2 (81-133)||(24105697-24105749)
chr2 (81-133)||(37411252-37411304)
chr2 (10-73)||(5040782-5040845)
chr2 (2-73)||(15972921-15972992)
chr2 (2-73)||(37559025-37559096)
chr2 (2-132)||(4207857-4207986)
chr2 (128-162)||(18422548-18422582)
chr2 (69-111)||(18622627-18622669)
chr2 (83-133)||(28677908-28677958)
chr2 (2-116)||(38355817-38355930)
chr2 (1-45)||(15907850-15907894)
chr2 (3-51)||(23354582-23354629)
chr2 (86-130)||(25846743-25846787)
chr2 (81-133)||(31808076-31808128)
[»] chr8 (52 HSPs)
chr8 (2-125)||(22651983-22652106)
chr8 (2-109)||(29447467-29447574)
chr8 (1-124)||(11803267-11803390)
chr8 (3-133)||(29447040-29447170)
chr8 (2-133)||(15816058-15816189)
chr8 (2-111)||(26902104-26902213)
chr8 (2-125)||(29510233-29510356)
chr8 (2-124)||(11927015-11927137)
chr8 (1-133)||(27067230-27067358)
chr8 (3-94)||(24205749-24205840)
chr8 (1-111)||(34450960-34451075)
chr8 (2-124)||(11944673-11944795)
chr8 (1-132)||(16641908-16642033)
chr8 (1-130)||(37283754-37283867)
chr8 (4-73)||(3025599-3025668)
chr8 (2-111)||(18964198-18964309)
chr8 (81-133)||(34897084-34897136)
chr8 (6-73)||(5813640-5813707)
chr8 (2-125)||(21465419-21465542)
chr8 (2-53)||(27213593-27213644)
chr8 (2-52)||(40064031-40064081)
chr8 (3-73)||(43737752-43737822)
chr8 (2-55)||(8343033-8343086)
chr8 (81-162)||(12606837-12606918)
chr8 (64-133)||(24362193-24362262)
chr8 (33-125)||(2572016-2572108)
chr8 (81-133)||(4786346-4786398)
chr8 (85-133)||(7658462-7658510)
chr8 (1-45)||(17751732-17751776)
chr8 (1-45)||(17760719-17760763)
chr8 (5-73)||(40332239-40332307)
chr8 (2-73)||(3951476-3951547)
chr8 (2-61)||(8343387-8343446)
chr8 (2-73)||(33405324-33405395)
chr8 (2-73)||(36450694-36450765)
chr8 (82-133)||(39954288-39954339)
chr8 (83-133)||(4611533-4611583)
chr8 (2-132)||(12570664-12570793)
chr8 (81-131)||(20785473-20785523)
chr8 (2-40)||(24413499-24413537)
chr8 (2-76)||(28745554-28745628)
chr8 (4-73)||(926730-926799)
chr8 (85-126)||(14134705-14134746)
chr8 (4-57)||(16987977-16988030)
chr8 (4-73)||(20679337-20679406)
chr8 (72-133)||(36934669-36934730)
chr8 (81-133)||(7472523-7472575)
chr8 (81-125)||(13844604-13844648)
chr8 (81-125)||(14731719-14731763)
chr8 (14-62)||(22943301-22943349)
chr8 (7-51)||(31109463-31109507)
chr8 (81-125)||(31236585-31236629)
[»] scaffold0036 (1 HSPs)
scaffold0036 (4-133)||(9678-9807)
[»] chr3 (48 HSPs)
chr3 (4-125)||(4987222-4987343)
chr3 (1-131)||(17005547-17005677)
chr3 (1-111)||(34185051-34185161)
chr3 (2-73)||(20503513-20503584)
chr3 (1-131)||(8039763-8039893)
chr3 (6-111)||(14829710-14829816)
chr3 (1-133)||(25064908-25065038)
chr3 (2-126)||(41961579-41961703)
chr3 (2-73)||(55401123-55401194)
chr3 (3-164)||(34910277-34910435)
chr3 (3-132)||(10690193-10690321)
chr3 (4-93)||(13806275-13806363)
chr3 (6-125)||(11665951-11666070)
chr3 (2-133)||(14209112-14209243)
chr3 (2-133)||(28812514-28812645)
chr3 (2-73)||(40993275-40993346)
chr3 (2-124)||(15796223-15796345)
chr3 (84-133)||(11493372-11493421)
chr3 (64-133)||(16192741-16192810)
chr3 (4-129)||(29508447-29508567)
chr3 (1-73)||(35222986-35223058)
chr3 (2-61)||(27505311-27505370)
chr3 (83-133)||(12704006-12704056)
chr3 (67-125)||(25948881-25948939)
chr3 (128-162)||(37991465-37991499)
chr3 (68-125)||(11313795-11313852)
chr3 (2-51)||(40052382-40052431)
chr3 (22-133)||(2620004-2620113)
chr3 (1-69)||(4466539-4466607)
chr3 (81-133)||(7928449-7928501)
chr3 (2-73)||(10955000-10955074)
chr3 (2-46)||(14979224-14979268)
chr3 (2-70)||(26492145-26492213)
chr3 (3-50)||(8789489-8789536)
chr3 (2-73)||(11252024-11252095)
chr3 (2-73)||(13845465-13845536)
chr3 (1-76)||(46191282-46191357)
chr3 (3-109)||(14216915-14217021)
chr3 (3-109)||(14223044-14223150)
chr3 (2-51)||(11610579-11610628)
chr3 (32-125)||(14832106-14832199)
chr3 (70-111)||(15314873-15314914)
chr3 (3-60)||(15999951-16000008)
chr3 (2-38)||(4990912-4990948)
chr3 (85-160)||(29112292-29112369)
chr3 (81-133)||(32804548-32804600)
chr3 (81-125)||(49505162-49505206)
chr3 (1-45)||(51206292-51206336)
[»] chr4 (51 HSPs)
chr4 (3-139)||(30982808-30982944)
chr4 (2-133)||(24613630-24613761)
chr4 (2-133)||(19482667-19482798)
chr4 (2-131)||(36635325-36635449)
chr4 (1-124)||(903930-904053)
chr4 (2-111)||(22234819-22234928)
chr4 (1-73)||(23292925-23292997)
chr4 (1-111)||(5414100-5414210)
chr4 (2-73)||(12895214-12895285)
chr4 (32-111)||(44132603-44132682)
chr4 (1-111)||(46083919-46084029)
chr4 (2-107)||(19500787-19500892)
chr4 (68-136)||(5775353-5775421)
chr4 (2-41)||(30299009-30299048)
chr4 (2-41)||(30327877-30327916)
chr4 (2-45)||(37203328-37203371)
chr4 (67-125)||(15659754-15659812)
chr4 (32-133)||(38148684-38148785)
chr4 (2-50)||(715545-715593)
chr4 (2-50)||(752871-752919)
chr4 (3-67)||(3947702-3947766)
chr4 (1-73)||(12797277-12797349)
chr4 (1-45)||(12884346-12884390)
chr4 (2-124)||(24343515-24343632)
chr4 (81-133)||(40613449-40613501)
chr4 (2-46)||(40784028-40784072)
chr4 (2-73)||(2361915-2361986)
chr4 (2-41)||(5775304-5775343)
chr4 (1-72)||(8423657-8423728)
chr4 (86-133)||(8423731-8423778)
chr4 (1-76)||(15724482-15724557)
chr4 (82-133)||(22440609-22440660)
chr4 (2-73)||(34306744-34306815)
chr4 (2-73)||(49431074-49431145)
chr4 (2-45)||(53381530-53381573)
chr4 (3-125)||(847958-848080)
chr4 (3-45)||(14465006-14465048)
chr4 (2-52)||(18513175-18513225)
chr4 (68-122)||(18576032-18576086)
chr4 (5-51)||(28084594-28084640)
chr4 (7-125)||(30838217-30838335)
chr4 (2-51)||(30094083-30094132)
chr4 (64-133)||(40742590-40742659)
chr4 (2-38)||(824216-824252)
chr4 (7-51)||(3712458-3712502)
chr4 (2-50)||(11596297-11596345)
chr4 (73-109)||(15029788-15029824)
chr4 (2-62)||(18966568-18966628)
chr4 (1-45)||(28964187-28964231)
chr4 (2-50)||(29205539-29205587)
chr4 (1-73)||(30103296-30103368)
[»] chr7 (52 HSPs)
chr7 (2-125)||(24339649-24339772)
chr7 (3-133)||(32308119-32308249)
chr7 (2-133)||(1433453-1433578)
chr7 (2-125)||(5409771-5409888)
chr7 (2-73)||(15680857-15680928)
chr7 (15-133)||(6630854-6630972)
chr7 (2-111)||(9778521-9778624)
chr7 (3-132)||(11665370-11665499)
chr7 (81-133)||(22868041-22868093)
chr7 (3-133)||(32287404-32287523)
chr7 (2-73)||(598256-598327)
chr7 (2-73)||(21864856-21864927)
chr7 (1-111)||(2334271-2334380)
chr7 (48-133)||(29787346-29787429)
chr7 (4-125)||(26033392-26033513)
chr7 (2-73)||(21880200-21880271)
chr7 (2-73)||(24105726-24105797)
chr7 (2-61)||(43027404-43027463)
chr7 (1-51)||(6490786-6490836)
chr7 (67-121)||(17307904-17307958)
chr7 (1-102)||(25822685-25822786)
chr7 (47-124)||(26329356-26329433)
chr7 (2-51)||(40131939-40131988)
chr7 (81-133)||(5835246-5835298)
chr7 (64-132)||(8160416-8160484)
chr7 (1-133)||(11831431-11831563)
chr7 (7-67)||(13770750-13770810)
chr7 (57-133)||(15902821-15902897)
chr7 (3-133)||(20549790-20549909)
chr7 (69-133)||(21140978-21141042)
chr7 (68-116)||(22602705-22602753)
chr7 (69-133)||(27945040-27945104)
chr7 (1-111)||(32093953-32094058)
chr7 (3-106)||(4794915-4795018)
chr7 (3-50)||(18035806-18035852)
chr7 (67-133)||(5548675-5548741)
chr7 (2-60)||(29763129-29763187)
chr7 (67-133)||(33384576-33384642)
chr7 (70-124)||(35297669-35297723)
chr7 (2-124)||(38134335-38134457)
chr7 (68-125)||(7328686-7328743)
chr7 (2-51)||(14729773-14729822)
chr7 (67-124)||(16341504-16341561)
chr7 (64-133)||(19206049-19206118)
chr7 (1-50)||(40287301-40287350)
chr7 (5-45)||(8842282-8842322)
chr7 (7-51)||(11722073-11722117)
chr7 (81-125)||(17851438-17851482)
chr7 (81-133)||(18035872-18035924)
chr7 (63-111)||(18039020-18039068)
chr7 (4-60)||(22868108-22868164)
chr7 (2-38)||(35862034-35862070)
[»] scaffold0123 (1 HSPs)
scaffold0123 (2-132)||(44454-44584)
[»] scaffold0019 (2 HSPs)
scaffold0019 (2-111)||(71746-71855)
scaffold0019 (128-164)||(71677-71713)
[»] scaffold0003 (2 HSPs)
scaffold0003 (2-111)||(241615-241724)
scaffold0003 (2-51)||(236914-236963)
[»] scaffold0044 (1 HSPs)
scaffold0044 (9-123)||(53189-53303)
[»] scaffold0136 (1 HSPs)
scaffold0136 (2-111)||(3778-3887)
[»] scaffold0008 (1 HSPs)
scaffold0008 (4-125)||(263303-263424)
[»] scaffold0623 (1 HSPs)
scaffold0623 (3-111)||(5926-6034)
[»] scaffold1528 (1 HSPs)
scaffold1528 (2-133)||(1034-1165)
[»] scaffold0652 (1 HSPs)
scaffold0652 (3-73)||(403-473)
[»] scaffold0004 (1 HSPs)
scaffold0004 (3-165)||(92772-92940)
[»] scaffold0227 (1 HSPs)
scaffold0227 (76-164)||(7314-7405)
[»] scaffold0450 (1 HSPs)
scaffold0450 (2-133)||(8564-8695)
[»] scaffold0053 (1 HSPs)
scaffold0053 (2-73)||(8846-8917)
[»] scaffold0011 (1 HSPs)
scaffold0011 (2-76)||(17542-17616)
[»] scaffold0380 (1 HSPs)
scaffold0380 (2-75)||(8647-8720)
[»] scaffold0306 (1 HSPs)
scaffold0306 (4-133)||(13399-13523)
[»] scaffold0171 (2 HSPs)
scaffold0171 (2-111)||(23532-23641)
scaffold0171 (67-111)||(23441-23485)
[»] scaffold0152 (1 HSPs)
scaffold0152 (4-133)||(21804-21928)
[»] scaffold0086 (1 HSPs)
scaffold0086 (2-111)||(2949-3058)
[»] scaffold0057 (1 HSPs)
scaffold0057 (2-76)||(24080-24155)
[»] scaffold0793 (1 HSPs)
scaffold0793 (2-50)||(4821-4869)
[»] scaffold0020 (1 HSPs)
scaffold0020 (69-125)||(135308-135364)
[»] scaffold0475 (1 HSPs)
scaffold0475 (2-45)||(3384-3427)
[»] scaffold0361 (1 HSPs)
scaffold0361 (88-161)||(14498-14574)
[»] scaffold0154 (1 HSPs)
scaffold0154 (2-92)||(13453-13543)
[»] scaffold0279 (1 HSPs)
scaffold0279 (33-94)||(17840-17901)
[»] scaffold0085 (1 HSPs)
scaffold0085 (97-133)||(26392-26428)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-37)||(46741-46777)
[»] scaffold0022 (1 HSPs)
scaffold0022 (69-133)||(99892-99956)


Alignment Details
Target: chr6 (Bit Score: 158; Significance: 5e-84; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 192 - 353
Target Start/End: Complemental strand, 7248307 - 7248146
Alignment:
Q  192 gcagaacttgtttgtattgtttagattagaagagactaacctggaggaggaagaagttttttggtgaaaaatctcttctttgtgagtctactattccaat 291  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7248307 gcagaacttgtttgtattgtttagattagaagagactaaccaggaggaggaagaagttttttggtgaaaaatctcttctttgtgagtctactattccaat 7248208  T
Q  292 caaatagctgagagaaaattccaatacaaccaccacctagcttttgattattcttcttctct 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7248207 caaatagctgagagaaaattccaatacaaccaccacctagcttttgattattcttcttctct 7248146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 7248489 - 7248329
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7248489 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 7248390  T
Q  101 ttatgtgatttcctcagattattagtggtgtcgtgtctgatgtctgtatccgtgcttcata 161  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7248389 ttatgtgatttcctcagattattagtggtgccgtgtctgatgtctgtatccgtgcttcata 7248329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 16766827 - 16766704
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||||| || ||||||| | |||||||||||||| ||||| |||||||||| ||||||||||||| || |||| | ||||||| ||||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 16766728  T
Q  102 tatgtgatttcctcagattattag 125  Q
    ||||||||||  ||| ||||||||    
T  16766727 tatgtgattttttcaaattattag 16766704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 9629514 - 9629382
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgaca-cgactccaacacatataattaccctga 99  Q
    ||||||||||| |||||||||||||||| |||||||| | ||||| |||||||||||||||| ||| ||||| |||| || ||||||||||||||  |||    
T  9629514 actatgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgaca-cgacaccgacaccgacacatataattacattga 9629416  T
Q  100 attatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||| |||| |||||| | |||||||    
T  9629415 attatgtgattttctcaaattattggcggtgtcg 9629382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 9107299 - 9107422
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||| ||||||||||||| |  ||||||||||||| |||||| ||||||||| ||||||||||||| || |||| | ||||||| ||||||    
T  9107299 ctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 9107398  T
Q  102 tatgtgatttcctcagattattag 125  Q
    | ||||||||  ||| ||||||||    
T  9107399 tttgtgattttttcaaattattag 9107422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 34073277 - 34073399
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    |||||||||||||||||||||||| ||| || ||||||||||||| | ||||||| ||||  | |||||||||||| || || ||||||||||| |||||    
T  34073277 actatgaagcacggacactcctcgaattagaggtgtcccggtgtcgg-cacatgtcgtgtaga-caccgacacgacaccgacccatataattacactgaa 34073374  T
Q  101 ttatgtgatttcctcagattattag 125  Q
    ||||| ||||| |||| ||||||||    
T  34073375 ttatgagattttctcaaattattag 34073399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 8365448 - 8365579
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||| |||||||||||| | |||||||| ||||| ||||| ||| |||||| | ||||||||||| || |||| | ||||||| | ||||    
T  8365448 ctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaat 8365547  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||| |  ||| ||||||||| ||||||    
T  8365548 tatgtgatattttcaaattattagttgtgtcg 8365579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 18367966 - 18367857
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||||| ||||  | |||||||| ||||||||||  ||| |||||  ||||||||||||| || |||||||||||||| ||| ||    
T  18367966 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgcat 18367867  T
Q  102 tatgtgattt 111  Q
    | ||||||||    
T  18367866 tttgtgattt 18367857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 10339054 - 10339174
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataatt-accctgaa 100  Q
    |||||||||||||||||||||| |||| | |||||||| ||||| ||||  ||| |||||| ||||||||||| | |  |||||||||||| || |||||    
T  10339054 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaa 10339153  T
Q  101 ttatgtgatttcctcagatta 121  Q
    ||||||||||| |||| ||||    
T  10339154 ttatgtgattttctcaaatta 10339174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 31385048 - 31384926
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    |||||||||||||||||||| ||||| | |||||||||||||  ||||| ||| |||||||||| | ||||||| |  |||| | ||||||| |||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaaca-ctacacgacactgacacttgtaattacactgaatt 31384950  T
Q  103 atgtgatttcctcagattattagt 126  Q
    |||||||||  ||| |||||||||    
T  31384949 atgtgattttttcaaattattagt 31384926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 34595253 - 34595182
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||||| ||| |||||| ||||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacac 34595182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 16488518 - 16488628
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    ||||||||||||| ||| |||| ||||  | |||||||| ||| ||||||| ||| |||||| ||||||||||||| || |||||||||||||| ||| |    
T  16488518 actatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgca 16488617  T
Q  101 ttatgtgattt 111  Q
    || ||||||||    
T  16488618 ttttgtgattt 16488628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 17327590 - 17327715
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||||||||||| | |||||||| ||||||||||| ||| ||||      |||||||||| |  ||||||||| |||| || |||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgt------ccgacacgacactgacacatatagttacactaaat 17327683  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||| |||| | | ||||| ||||||    
T  17327684 tatgtgattttctcaaaatcttagttgtgtcg 17327715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 8714110 - 8714001
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||  ||||||||||||||| | ||||||||| |||| || |  ||| |||||| ||||||||||||| || |||  | ||||||| ||||||    
T  8714110 ctatgaagcaaagacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaat 8714011  T
Q  102 tatgtgattt 111  Q
    ||||||||||    
T  8714010 tatgtgattt 8714001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 28152218 - 28152146
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||| |||||||||||||| | | |||||||||||| ||||| ||| |||||| ||||||||||    
T  28152218 actatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 28152146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 32978842 - 32978910
Alignment:
Q  5 tgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||||| ||||| |||||||||||||||| ||||  ||| |||||| ||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 32978910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 10294237 - 10294114
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||| |||||||||| |||| |  ||||||  || || ||||||||| |||||| ||||| ||||||| || ||||||||||||||  ||||     
T  10294237 ctatgaagcacagacactcctcagattagctgtgtcctagtttcggacacatgtcgtgtccgacaccaacacgacaccgacacatataattacattgaaa 10294138  T
Q  102 tatgtgatttcctcagattattag 125  Q
    |||| ||||  |||| ||||||||    
T  10294137 tatgcgattatctcaaattattag 10294114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 5970037 - 5970159
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||  | ||||||||||||| | ||||||||| |||| || |  ||| |||||| ||||||||||||| || |||  | ||||||| ||||||    
T  5970037 ctatgaagcatagtcactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaat 5970136  T
Q  102 tatgtgatttcctcagattatta 124  Q
    ||||||||||  ||| |||||||    
T  5970137 tatgtgattttttcaaattatta 5970159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 17841530 - 17841596
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccg 69  Q
    |||||||||||||||||||||||||| | |||||| | ||||| ||||||||| |||||| ||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccg 17841596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 9025490 - 9025546
Alignment:
Q  69 gacacgactccaacacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    |||||||| || |||||||||||||| |||||||||||||||| |||| ||||||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattattag 9025546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 19040403 - 19040351
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||| |||||||||||||||| |||| |||||||| |||||||    
T  19040403 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcg 19040351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 31959268 - 31959216
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgt 55  Q
    |||||||||||||||||||||||||| |  ||||||||||||| |||||||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgt 31959216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 32839571 - 32839697
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccgg-tgtcagacacatgttgtgtccaacaccgacacgactccaacacat---ataattaccct 97  Q
    ||||||||||| |||||| |||||||| | |||||||||| ||| ||||||||||  ||||| ||||  ||| ||| |||||||||   |||||||  ||    
T  32839571 ctatgaagcacagacacttctcggattaggcgtgtcccggttgttagacacatgtcttgtccgacactaacatgacaccaacacatatgataattatact 32839670  T
Q  98 gaattatgtgatttcctcagattatta 124  Q
    | |||||||||||| |||| |||||||    
T  32839671 ggattatgtgattttctcaaattatta 32839697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 7378098 - 7378027
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||||| ||| |||| | |||||||||||||| ||  ||||| |||||| ||||||||||    
T  7378098 ctatgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacac 7378027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 13364645 - 13364716
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||| ||||||| ||||| | ||||||||| |||||||||||  | | |||||||||||||||||    
T  13364645 ctatgaagcacagacactcgtcggaatagacgtgtcctggtgtcagacatgtatcgtgtccaacaccgacac 13364716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 7265601 - 7265651
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgt 131  Q
    |||||||||||||| |||||||||||||||| |||| |||||||| |||||    
T  7265601 acacatataattacactgaattatgtgattttctcaaattattagcggtgt 7265651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 9195728 - 9195806
Alignment:
Q  47 gacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    ||||||||| |||||  ||||| ||||||| || |||||||||||||| || |||||||| |||| |||| ||||||||    
T  9195728 gacacatgtcgtgtcagacacctacacgacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 9658998 - 9658928
Alignment:
Q  3 tatgaagcacggacactcctcggattt-gacgtgtcccggtgtcagacacatgttgtgtccaacaccgaca 72  Q
    |||||||||||||||||||| ||| || | ||||| |||||||||||||| ||| ||||| ||||||||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgaca 9658928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 13360382 - 13360432
Alignment:
Q  83 acatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||| |||||||||||||||| |||| |||| |||||||||||    
T  13360382 acatataattacactgaattatgtgattttctcaaattactagtggtgtcg 13360432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 26562757 - 26562696
Alignment:
Q  64 acaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    |||||||||||||  | |||||||||||||| |||||||||||||||| |||| ||| ||||    
T  26562757 acaccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttag 26562696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 7151473 - 7151413
Alignment:
Q  71 cacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgt 131  Q
    |||||| ||||||||||||||||| || |||||||||||||  ||| |||||||| |||||    
T  7151473 cacgacaccaacacatataattacacttaattatgtgattttttcaaattattagaggtgt 7151413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 9027241 - 9027177
Alignment:
Q  69 gacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||| || |||||||||||||| | |||||||||||||  |||| |||||||| |||||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcg 9027177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24645601 - 24645529
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||| ||||||| ||||||| ||||||||  |||||| ||||| ||| |||||  ||||||||||    
T  24645601 actatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacac 24645529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 34868760 - 34868820
Alignment:
Q  47 gacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtg 107  Q
    ||||| |||||| |||||||| |||||||| | || |||||||||||| ||||||||||||    
T  34868760 gacacgtgttgtatccaacactgacacgacactaagacatataattacactgaattatgtg 34868820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 4878061 - 4877991
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||||||||||| | ||||| || ||||| ||||  ||| |||||| ||||||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacaccgacac 4877991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 6665279 - 6665220
Alignment:
Q  66 accgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    ||||||||||  || ||||| |||||||| |||||||||||||||| |||| ||||||||    
T  6665279 accgacacgataccgacacaaataattactctgaattatgtgatttactcaaattattag 6665220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 8776908 - 8776967
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtc 61  Q
    ||||||||||||||||||||||||||| |  ||||| ||||||| ||||| ||| |||||    
T  8776908 ctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtc 8776967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 9617509 - 9617442
Alignment:
Q  57 gtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattatta 124  Q
    |||||| ||||||  ||||| || ||||||||||||||  ||||||||||||||| |||| |||||||    
T  9617509 gtgtccgacaccgcgacgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 10842652 - 10842531
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||||||||||| | |||||| ||||     |||||     ||||| |||||||||||  | | |||||||| ||||| || |||    
T  10842652 ctatgaagcacggacactcctcggattagccgtgtctcggt-----acaca-----tgtccgacaccgacacgtgttcgacacatatgattacactaaat 10842563  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||||  ||| |||||||| |||||||    
T  10842562 tatgtgattttttcaaattattagcggtgtcg 10842531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 28715414 - 28715343
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||| ||||| |||| ||| | ||||||||||||||  |||| ||| |||||| ||||||||||    
T  28715414 ctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacac 28715343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 32511666 - 32511725
Alignment:
Q  73 cgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtc 132  Q
    |||| ||||||| ||||||||| |||||||||||||||| || | |||||||| ||||||    
T  32511666 cgacaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgtc 32511725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 7723240 - 7723302
Alignment:
Q  63 aacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    |||||||||||||| || | |||||||||||  ||||||||| |||||| |||| ||||||||    
T  7723240 aacaccgacacgacaccgatacatataattatgctgaattatatgattttctcaaattattag 7723302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 8389411 - 8389457
Alignment:
Q  5 tgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    |||||||||||||||||||||||| |  ||||||||||||| |||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 8389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 9025448 - 9025494
Alignment:
Q  5 tgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    ||||||||||||||| |||||||| | |||||||||||||| |||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 30866152 - 30866202
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgt 131  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| |||||    
T  30866152 acacatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 7938219 - 7938170
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    ||||||||||||||||||||||||||  | |||||| ||||||| |||||    
T  7938219 ctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacac 7938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 17435329 - 17435220
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||| |||||||||  || |||| |||||||||| |||||  |||| ||| |||||| ||| |||||  || | ||||| | ||||||| ||||||    
T  17435329 ctatgaagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaat 17435230  T
Q  102 tatgtgattt 111  Q
    ||||| ||||    
T  17435229 tatgtaattt 17435220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 24831922 - 24831869
Alignment:
Q  7 aagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgt 60  Q
    |||||| ||||||| ||||||| ||||||||||| ||||||| | |||||||||    
T  24831922 aagcacagacactcttcggattagacgtgtcccgatgtcagatatatgttgtgt 24831869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 7086846 - 7086802
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    |||||||||||||| || ||||||||||||| |||| ||||||||    
T  7086846 acacatataattacactaaattatgtgattttctcaaattattag 7086802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 9658926 - 9658878
Alignment:
Q  85 atataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||| |||||||||||||||| || | |||||||| |||||||    
T  9658926 atataattacactgaattatgtgattttcttaaattattagcggtgtcg 9658878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 10888969 - 10889033
Alignment:
Q  68 cgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtc 132  Q
    ||||||||| | |||||||||||| || || |||||||||||||  ||| |||||||| ||||||    
T  10888969 cgacacgacactaacacatataatcacactaaattatgtgattttatcaaattattagcggtgtc 10889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 11424685 - 11424749
Alignment:
Q  47 gacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgattt 111  Q
    ||||||||| |||| | |||||||||| || ||||||||||||||||   |||||||| ||||||    
T  11424685 gacacatgtcgtgttcgacaccgacacaacaccaacacatataattatattgaattatatgattt 11424749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 13851787 - 13851735
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||| |||||||| || |||| |||| |||||||| |||||||    
T  13851787 acacatataattacactgaattacgttattttctcaaattattagcggtgtcg 13851735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 19044515 - 19044463
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||||| || |||||||||||||| | |||| ||||||||| ||||||    
T  19044515 acacatataataacactgaattatgtgatattctcaaattattagtcgtgtcg 19044463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 26178620 - 26178668
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacaca 52  Q
    ||||||||| |||||||||| |||| | ||||||||||||||| |||||    
T  26178620 atgaagcacagacactcctccgattaggcgtgtcccggtgtcaaacaca 26178668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 4e-35; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 9828174 - 9828043
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| |||||  |||| |||||||| || ||||||| |||||| ||||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaat 9828075  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||||  ||| ||||||||||||||||    
T  9828074 tatgtgattttatcaaattattagtggtgtcg 9828043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 47989628 - 47989518
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    |||||||||||||||||||||||||||| | ||||||||| |||||||||  ||| |||||| ||||||||||||| || |||| | ||||||| |||||    
T  47989628 actatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaa 47989529  T
Q  101 ttatgtgattt 111  Q
    |||||||||||    
T  47989528 ttatgtgattt 47989518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 25362012 - 25361885
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||| ||||||| |  |||| |||||||| ||||  ||| |||||| ||||||||||||| |  |||||||||||||| ||||||    
T  25362012 ctatgaagcacggacactcttcggattag--gtgttccggtgtcggaca--tgtcgtgtccgacaccgacacgacactgacacatataattacactgaat 25361917  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||| |||| ||||| ||||||||||    
T  25361916 tatgtgattttctcaaattatcagtggtgtcg 25361885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 5944413 - 5944304
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||| |||||||||||||| | ||| |||||||||| ||||  ||||||||||  || ||||||||| || |||| ||||||||| ||||||    
T  5944413 ctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaat 5944314  T
Q  102 tatgtgattt 111  Q
    ||||||||||    
T  5944313 tatgtgattt 5944304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 36906126 - 36905998
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||| | | ||| |  ||||||| ||||||||| |  || |||||| |||| ||||| || ||||||||||||||||| ||||||    
T  36906126 ctatgaagcacggacactctt-gcattaggtgtgtcccagtgtcagacgcgggtcgtgtccgacactgacacaacgccaacacatataattactctgaat 36906028  T
Q  102 tatgtgatttcctcagattattagtggtgt 131  Q
    |||||||||| ||||||||||||| |||||    
T  36906027 tatgtgattttctcagattattagcggtgt 36905998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 40917879 - 40917805
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgac 76  Q
    |||||||||||||||| |||||||||| | |||||||||||||| ||||| ||| ||||||||||||||||||||    
T  40917879 ctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgac 40917805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 25934746 - 25934637
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||||| ||||  | ||| |||| ||||||||||| ||| |||||| ||||||||||||  || |||||||||||||| ||| ||    
T  25934746 ctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtat 25934647  T
Q  102 tatgtgattt 111  Q
    | ||||||||    
T  25934646 tttgtgattt 25934637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 32461393 - 32461516
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||||||| || ||||| | |||||||| ||||||||||| ||| |||||| |||||||||| || ||||||| | |||||||  | |||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac-acaccaacacttgtaattacattaaat 32461491  T
Q  102 tatgtgatttcctcagattattagt 126  Q
    ||||||||||  ||| |||||||||    
T  32461492 tatgtgattttttcaaattattagt 32461516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 1486646 - 1486761
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatta 103  Q
    ||||||||| ||||||||||||||| | |||||||||||||| ||||| ||| ||||      |||||||||| || |||| ||||||||| ||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt------ccgacacgacaccgacacttataattacactgaatta 1486739  T
Q  104 tgtgatttcctcagattattag 125  Q
    ||||||||  ||| ||||||||    
T  1486740 tgtgattttttcaaattattag 1486761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 27471525 - 27471618
Alignment:
Q  32 cgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    |||||||||||||| ||||| ||| || ||||||||||| | ||| ||||||||| ||||||| |||||||||||| ||| |||| ||||||||    
T  27471525 cgtgtcccggtgtcggacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaattattag 27471618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 31694639 - 31694748
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||||||||||| |||| | ||||| ||||||||  | |  |||||||||| ||||||||||||| || |||| | ||||||  ||||||    
T  31694639 ctatgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 31694738  T
Q  102 tatgtgattt 111  Q
    ||||||||||    
T  31694739 tatgtgattt 31694748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 17754441 - 17754310
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||| |||||||| ||| |   ||||  | ||||| ||||| |||||||||||||||||||||| || |  ||||||||| |||| ||||||    
T  17754441 ctatgaagcacgaacactccttggactatccgtgctctggtgttagacatatgttgtgtccaacaccgacaccacactgacacatatagttacactgaat 17754342  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||| ||||  ||| |||||||| |||||||    
T  17754341 tatgtaattttttcaaattattagcggtgtcg 17754310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 9629834 - 9629960
Alignment:
Q  7 aagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgt 106  Q
    ||||||||||||| || |||   |||||||||||||||| ||||  ||| |||||| ||| ||||||||| || |||| |||||| || ||||||||| |    
T  9629834 aagcacggacacttcttggacgagacgtgtcccggtgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatat 9629933  T
Q  107 gatttcctcagattattagtggtgtcg 133  Q
    |||||  ||| |||||||| |||||||    
T  9629934 gattttatcaaattattagcggtgtcg 9629960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 17831462 - 17831591
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgt-tgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    ||||||| || ||||||||||  |||| | |||||||||||||| |||||||||  |||||| |||| |||||||   | |||||||| ||||| |||||    
T  17831462 ctatgaaacatggacactcctaagattaggcgtgtcccggtgtcggacacatgtcggtgtccgacactgacacga---cgacacatatgattacactgaa 17831558  T
Q  101 ttatgtgatttcctcagattattagtggtgtcg 133  Q
    | ||||||||| |||| |||||||| |||||||    
T  17831559 taatgtgattttctcaaattattagcggtgtcg 17831591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 5898206 - 5898326
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||| |||||||||||||||||||||| |||||||||||||||  ||||| ||| |||||  ||||||           || ||||||||||| ||||||    
T  5898206 ctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccg-----------acgcatataattacactgaat 5898294  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||||  |||||||||||| |||||||    
T  5898295 tatgtgattttttcagattattagcggtgtcg 5898326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 42359391 - 42359460
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||||||||| | |||||||||||||| |||||| ||  ||||| ||||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacac 42359460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 44482305 - 44482240
Alignment:
Q  57 gtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattat 122  Q
    |||||| ||||||||||||| || |||||||||||||| |||||||||||||||| |||| |||||    
T  44482305 gtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 6427422 - 6427351
Alignment:
Q  60 tccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgt 131  Q
    |||||| | |||||||| |||||||||||||||||  ||||||||||||||| |||| |||||||| |||||    
T  6427422 tccaaccctgacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgt 6427351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 18337448 - 18337377
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||||||||||  | | |||||| ||||| ||||| |||||||||| ||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacac 18337377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 22881567 - 22881610
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtc 45  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  22881567 ctatgaagcacggacactcctcggattagacgtgtcccggtgtc 22881610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 37598950 - 37598879
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||||||||||| | ||||||||  |||| ||||| ||| |||||| ||||||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacac 37598879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 6414932 - 6415053
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    |||||||||||||||||||||||||   | ||||| ||||||||||||| ||| |||||| ||| ||| | ||| || |||||| ||||||  ||| |||    
T  6414932 tatgaagcacggacactcctcggatgaaatgtgtcgcggtgtcagacacgtgtcgtgtccgacatcga-atgacaccgacacatctaattaaactgtatt 6415030  T
Q  103 atgtgatttcctcagattattag 125  Q
    ||||||||| |||| || |||||    
T  6415031 atgtgattttctcaaataattag 6415053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 6612112 - 6612222
Alignment:
Q  14 gacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcc 113  Q
    ||||||||| ||||| | ||||||| |||||| ||||||| | |||||| ||| ||||||||| || |||| | ||||||| ||||||||||| ||||      
T  6612112 gacactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttt 6612211  T
Q  114 tcagattatta 124  Q
    ||| |||||||    
T  6612212 tcaaattatta 6612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 16164244 - 16164366
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||| |||  |||||| ||||||| | ||||||| |||||| ||||| ||||| |||||||||| |||||||    ||||||||||||||  | |||    
T  16164244 ctatgaaacacatacactcttcggattaggcgtgtcctggtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaat 16164343  T
Q  102 tatgtgatttcctcagattatta 124  Q
    ||||||||||  ||| |||||||    
T  16164344 tatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 6427594 - 6427485
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||| || |||| | |||||||||||||| ||||| ||| |||||| || || ||||||| |  |||| | || ||||  |||||    
T  6427594 ctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattgaat 6427495  T
Q  102 tatgtgattt 111  Q
    ||||||||||    
T  6427494 tatgtgattt 6427485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 34371798 - 34371714
Alignment:
Q  47 gacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtc 132  Q
    ||||| ||| || ||| ||||| ||||||| || |||||||||||||| |||||||||||||||| |||| |||||||| ||||||    
T  34371798 gacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgattttctca-attattagcggtgtc 34371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 13436517 - 13436465
Alignment:
Q  73 cgactccaacacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    |||| ||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  13436517 cgacaccaacacatataattacactgaattatgtgatttccttaaattattag 13436465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 16297223 - 16297287
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacacc 68  Q
    ||||||||||||||||||||||||| | ||||||| |||||| |||||| || |||||| |||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacacc 16297287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 20157346 - 20157410
Alignment:
Q  69 gacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||| || |||||||| ||||| |||||||||||||||| |||| |||||||| |||||||    
T  20157346 gacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcg 20157410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 22515826 - 22515898
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||||||||||||||| | |||||| ||||||| || |  ||| |||||| ||||||||||    
T  22515826 actatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacac 22515898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 46348322 - 46348394
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||||| ||||||||  | |||||| ||||||| ||||| ||| |||||| ||||||||||    
T  46348322 actatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 46348394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 7918219 - 7918270
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtc 132  Q
    |||||||||||||| |||||||||||||||| |||| |||||||||| ||||    
T  7918219 acacatataattacactgaattatgtgattttctcaaattattagtgatgtc 7918270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 34298482 - 34298435
Alignment:
Q  86 tataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgtcg 34298435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 10233304 - 10233254
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgt 131  Q
    |||||||||||||| |||||||||||||||| ||||  |||||||||||||    
T  10233304 acacatataattacactgaattatgtgattttctcaatttattagtggtgt 10233254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 15765877 - 15765827
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacaca 52  Q
    ||||||||||||||||||| ||||||| | |||||||| ||||||||||||    
T  15765877 ctatgaagcacggacactcttcggattaggcgtgtcccagtgtcagacaca 15765827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 10572580 - 10572649
Alignment:
Q  64 acaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||| |||| || || |||||| ||||||| | |||||||||||||| |||| ||||||||||||||||    
T  10572580 acaccaacacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcg 10572649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 12713301 - 12713382
Alignment:
Q  47 gacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtgg 128  Q
    ||||| |||||||| | |||||||||  || |||| |||||||||||| || ||||||||||||| || | |||||||||||    
T  12713301 gacacgtgttgtgtacgacaccgacataacaccaatacatataattacactaaattatgtgattttcttaaattattagtgg 12713382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 12717392 - 12717473
Alignment:
Q  47 gacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtgg 128  Q
    ||||| |||||||| | |||||||||  || |||| |||||||||||| || ||||||||||||| || | |||||||||||    
T  12717392 gacacgtgttgtgtacgacaccgacataacaccaatacatataattacactaaattatgtgattttcttaaattattagtgg 12717473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 27965940 - 27965985
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcag 47  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcag 27965985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 29163323 - 29163392
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||| ||||| ||| |||| | |||||||||||||||| ||| ||| |||||| ||||||||||    
T  29163323 atgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacac 29163392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 14332652 - 14332700
Alignment:
Q  83 acatataattaccctgaattatgtgatttcctcagattattagtggtgt 131  Q
    |||||||||||| || ||||||||||||| |||| ||||||||||||||    
T  14332652 acatataattacactaaattatgtgattttctcaaattattagtggtgt 14332700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 18556384 - 18556492
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    ||||||||||||||||||| |||||||| | |||||||| ||||| || || ||| | |||  |||||| |||||| |||| || | |||||||  | ||    
T  18556384 actatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaa 18556483  T
Q  101 ttatgtgat 109  Q
    |||||||||    
T  18556484 ttatgtgat 18556492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 25098563 - 25098615
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||| |||||||||||||||| |||| ||||| || |||||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgtcg 25098615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 36878512 - 36878460
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||| ||||||||| |||||||||||||||| |||| |||||||| |||||||    
T  36878512 acacctataattacactgaattatgtgattttctcaaattattagcggtgtcg 36878460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 48450550 - 48450586
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcc 38  Q
    ||||||||||||||||||||||||||| |||||||||    
T  48450550 ctatgaagcacggacactcctcggattagacgtgtcc 48450586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 1704988 - 1705083
Alignment:
Q  69 gacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtc-gtgtct-gatgtctgtatccgtgcttcatag 162  Q
    |||||||| || |||| | ||||||||||||||||||||||||  ||| ||||||||  ||||| |||| | | |||| |||||||||||||||||    
T  1704988 gacacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccgtatccgtgcttcatag 1705083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 124
Target Start/End: Original strand, 1864888 - 1864931
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattatta 124  Q
    |||||||||||||| |||||||||||||||| |||| |||||||    
T  1864888 acacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 21365992 - 21366035
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtc 45  Q
    ||||||||||||||||||||||||||| | |||||| |||||||    
T  21365992 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtc 21366035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 22947849 - 22947806
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtc 45  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||    
T  22947849 ctatgaagcacggacactcctcggattaggcgtgtccaggtgtc 22947806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 30359484 - 30359441
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtc 45  Q
    |||||||||||||||||||||| |||||| ||||||||| ||||    
T  30359484 ctatgaagcacggacactcctcagatttggcgtgtcccgttgtc 30359441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 133
Target Start/End: Complemental strand, 38503386 - 38503319
Alignment:
Q  66 accgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||| ||| || |||||||||||||| ||||| ||| |||||| |||| |||||||| |||||||    
T  38503386 accgacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcg 38503319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 40181976 - 40181878
Alignment:
Q  16 cactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctc 115  Q
    ||||||||||||| | |||||||||||||  ||||| |||||||||| ||||||| ||           |||||||||| |||||||||||||||| |||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatac-----------atataattacactgaattatgtgattttctc 40181888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 41597410 - 41597497
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatata 89  Q
    ||||||||||| ||||||||| ||||    ||| |||| ||||||||||| ||| |||||| |||| ||||| || ||||||||||||    
T  41597410 ctatgaagcacagacactccttggataaagcgtatccccgtgtcagacacgtgtcgtgtccgacacggacacaacaccaacacatata 41597497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 7918154 - 7918200
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcaga 48  Q
    ||||||||||||||||||||||||||| |  |||||| |||||||||    
T  7918154 ctatgaagcacggacactcctcggattaggtgtgtcctggtgtcaga 7918200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 11412709 - 11412779
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgtt-gtgtccaacaccgacac 73  Q
    ||||||||||||||||||| ||||  | | |||||  ||||| |||||||||| |||||||||||||||||    
T  11412709 atgaagcacggacactcctaggataaggcatgtcctagtgtcggacacatgttggtgtccaacaccgacac 11412779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35702541 - 35702579
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtccc 39  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  35702541 actatgaagcacggacactcctcggattaggcgtgtccc 35702579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 40258874 - 40258944
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||| |||||||||||||||| | ||||||| |||||| ||||  ||| |||||  ||||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacac 40258944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16812676 - 16812635
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggt 42  Q
    ||||||||||||||||||||||| |||| | |||||||||||    
T  16812676 actatgaagcacggacactcctcagattaggcgtgtcccggt 16812635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 29144320 - 29144369
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    ||||||||||||||||||| ||||||| | ||||| |||||||| |||||    
T  29144320 ctatgaagcacggacactcttcggattaggcgtgttccggtgtcggacac 29144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 46940748 - 46940797
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    |||||||||||| |||||||||||||| | ||||| |||||||| |||||    
T  46940748 ctatgaagcacgaacactcctcggattaggcgtgttccggtgtcggacac 46940797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 398773 - 398825
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||| ||||||||| ||||||||||||||||  ||| |||||||| |||||||    
T  398773 acacctataattacactgaattatgtgattttttcaaattattagcggtgtcg 398825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 5376484 - 5376560
Alignment:
Q  57 gtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||| ||| ||||||||| || |||| | ||||||| ||||||||||| |||| || | |||||||| |||||||    
T  5376484 gtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcg 5376560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 9630655 - 9630691
Alignment:
Q  128 gtgtcgtgtctgatgtctgtatccgtgcttcatagat 164  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  9630655 gtgttgtgtctggtgtctgtatccgtgcttcatagat 9630691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 10577676 - 10577724
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    |||||||||||||||||||| ||||  | |||||||| |||||||||||    
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 10577724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18190047 - 18190107
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtc 61  Q
    |||||||||| |  |||||||||||||| |  ||||||||||||| ||||| |||||||||    
T  18190047 actatgaagcgcatacactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtc 18190107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 19324612 - 19324572
Alignment:
Q  82 cacatataattaccctgaattatgtgatttcctcagattat 122  Q
    ||||||||||||| |||||||||||||||| |||| |||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 3966632 - 3966502
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    |||||||||||||||||||||||||| ||||||||||  |||  |||||||||||||||| |||| |||||||| || |||||||||||||| |||||||    
T  3966632 tatgaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaatt 3966533  T
Q  103 atgtgatttcctcagattattagtggtgtcg 133  Q
     |||||||| |||| |||||||| |||||||    
T  3966532 gtgtgattttctcaaattattagcggtgtcg 3966502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 39698672 - 39698509
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    |||||||||||||||||||||||||||| | |||||| ||||||| || |||||| |||||| ||||||||||||| |  |||| | ||||||| |||||    
T  39698672 actatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaa 39698573  T
Q  101 ttatgtgatttcctcagattattagtggtgt---cgtgtctgatgtctgtatccgtgcttcatag 162  Q
    |||||||||||  ||| ||||||||  ||||   |||||| | |||| |||||||||||||||||    
T  39698572 ttatgtgattttttcaaattattagctgtgtcagcgtgtcag-tgtccgtatccgtgcttcatag 39698509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 18592200 - 18592072
Alignment:
Q  5 tgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattat 104  Q
    |||||||||||||||| ||| ||| | ||||||||| |||||||||| |||||||||| ||||||||||||| ||  |||||||||||||  ||||||||    
T  18592200 tgaagcacggacactcatcgaattagccgtgtcccgatgtcagacacgtgttgtgtccgacaccgacacgacaccggcacatataattacattgaattat 18592101  T
Q  105 gtgatttcctcagattattagtggtgtcg 133  Q
    || |||| || | | |||||| |||||||    
T  18592100 gtaattttcttaaaatattagcggtgtcg 18592072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 32766872 - 32767003
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||||||||||| |||| ||||| ||| |||||| ||||| ||| || | | ||||||||||||| | |||||||||||||||  |||||    
T  32766872 ctatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacacgacacaaacacatataattacattgaat 32766971  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
    | || ||||| |||| |||||||| |||||||    
T  32766972 tgtgcgattttctcaaattattagcggtgtcg 32767003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 19579829 - 19579708
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatta 103  Q
    ||||| |||| |||||||||||||| | ||||||||||||| ||||| |||| |||||| |||| |||||||| || |||| | ||||| | || |||||    
T  19579829 atgaaacacgtacactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaatta 19579730  T
Q  104 tgtgatttcctcagattattag 125  Q
    |||||||| |||| ||||||||    
T  19579729 tgtgattttctcaaattattag 19579708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 6401627 - 6401519
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    |||||||||||||||||||| ||||  | ||| |||| ||||||||||| ||| |||||| |||| |||||||| || |||||||||||||| ||| |||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtatt 6401528  T
Q  103 atgtgattt 111  Q
     ||||||||    
T  6401527 ttgtgattt 6401519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 39268541 - 39268609
Alignment:
Q  5 tgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||||||||||| | |||||||| ||||| ||||||||| |||||||||||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacac 39268609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 21542159 - 21542056
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    ||||| ||||||||| |||| ||||| | |||||||||||||| ||||| ||| |||||| ||||||||||||| || |||| | ||||||| |||||||    
T  21542159 tatgatgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaatt 21542060  T
Q  103 atgt 106  Q
    ||||    
T  21542059 atgt 21542056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 41091186 - 41091309
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||| ||||||||| |||| |||||| |  ||||| |||||||||| | |||| |||  ||||||||  | |||||||||||||| ||||||    
T  41091186 ctatgaagcacgaacactcctcagattagacgtgccttggtgttagacacatgtcgcgtccgacattgacacgacatcgacacatataattacactgaat 41091285  T
Q  102 tatgtgatttcctcagattattag 125  Q
    |||||||||| |||| || |||||    
T  41091286 tatgtgattttctcaaatcattag 41091309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 21814392 - 21814282
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    ||||||||||||| ||| |||| ||||  | |||||||| ||| ||||||| ||| |||||| ||||||||||||| || |||||||||||||| ||| |    
T  21814392 actatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgca 21814293  T
Q  101 ttatgtgattt 111  Q
    || ||||||||    
T  21814292 ttttgtgattt 21814282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 7677835 - 7677676
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||| ||| ||||||||||| | |||||||||||||| ||||  ||  |||||  ||||||||||||| || |||| | ||||| | ||||||    
T  7677835 ctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaat 7677736  T
Q  102 tatgtgatttcctcagattattagtggtgtcgtgtctgatgtctgtatccgtgcttcataga 163  Q
    ||||||||||  ||| ||||||||  |||||| ||| | |||| || |||||||||||||||    
T  7677735 tatgtgattttttcaaattattagctgtgtcg-gtccg-tgtccgtttccgtgcttcataga 7677676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 21190998 - 21191067
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||||||||| | |||||||||| ||| ||||| |||||||||| ||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacac 21191067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 35017163 - 35017040
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    |||||||||||||||||||||||||||| | ||||||||| |||  |||||     ||| |||| || |||||||| | | | ||||||||||| || ||    
T  35017163 actatgaagcacggacactcctcggattaggcgtgtcccgatgttggacac-----gtgcccaatactgacacgacactatcccatataattacactaaa 35017069  T
Q  101 ttatgtgatttcctcagattattagtggt 129  Q
    ||||||||||| |||| ||||||||||||    
T  35017068 ttatgtgattttctcaaattattagtggt 35017040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 15410377 - 15410508
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||| ||||||| ||||||||||| || |||||||||||||||  ||||| ||| || || |||| |||||| || ||||||||||| ||||| ||||||    
T  15410377 ctattaagcacgaacactcctcggcttagacgtgtcccggtgttggacacttgtcgtatcgaacatcgacacaacaccaacacatatgattacactgaat 15410476  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
     || | |||| || | |||||||| |||||||    
T  15410477 catataattttcttaaattattagcggtgtcg 15410508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 21576685 - 21576756
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||||||||||| | |||||||| ||||||||||| ||| |||||| ||| ||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacac 21576756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 30098457 - 30098334
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    ||||||||||||||||| |||||||||| |  |||||| |||||| ||||| ||| |||||| |||| ||| |||  || |||  |||||||||  ||||    
T  30098457 actatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacactgactcgataccgacatctataattacattgaa 30098358  T
Q  101 ttatgtgatttcctcagattatta 124  Q
    ||||||||||| |||| |||||||    
T  30098357 ttatgtgattttctcaaattatta 30098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 43565000 - 43564929
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||||| |||||||| | |||||||||| ||| ||||||||| |||||| ||||||||||    
T  43565000 ctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacac 43564929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 37328775 - 37328882
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||||||||||||||||   ||| ||||||| || ||| |||   |||||| ||||||||||||| || |||||| ||||||| ||||||    
T  37328775 ctatgaagcacggacactcctcggattaagcgtatcccggtatcggacgcatc--gtgtccgacaccgacacgacaccgacacatgtaattacactgaat 37328872  T
Q  102 tatgtgattt 111  Q
    | ||||||||    
T  37328873 tttgtgattt 37328882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 14873641 - 14873527
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||||||||||| | |||||||||||||  ||||| ||||| ||      |||||| ||| || |||||||||||||| || |||    
T  14873641 ctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgt------ccgacatgacaccgacacatataattacactaaat 14873548  T
Q  102 tatgtgatttcctcagattat 122  Q
    |||||| ||| |||| |||||    
T  14873547 tatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 21522880 - 21522771
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||| |||||||||||| | ||||| | |||||||||||| | ||||| ||| |||||| ||||||||||||| || |||  | ||||||| ||||||    
T  21522880 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaat 21522781  T
Q  102 tatgtgattt 111  Q
    ||||| ||||    
T  21522780 tatgttattt 21522771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 21533446 - 21533337
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||| |||||||||||| | ||||| | |||||||||||| | ||||| ||| |||||| ||||||||||||| || |||  | ||||||| ||||||    
T  21533446 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaat 21533347  T
Q  102 tatgtgattt 111  Q
    ||||| ||||    
T  21533346 tatgttattt 21533337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 11686068 - 11685938
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||||||||||| |||| | |||| |  ||| |  ||||| ||| |||||| ||||||| ||||| || |||||||||||||| || |||    
T  11686068 ctatgaagcacggacactcctccgattagccgtgccttggttttggacacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaat 11685970  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
    |||| || || |||| |||||||| |||||||    
T  11685969 tatgcgactttctcaaattattagcggtgtcg 11685938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 27144514 - 27144462
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  27144514 acacatataattacactaaattatgtgatttcctcaaattattagcggtgtcg 27144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 40131751 - 40131627
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||| ||||||||||||| ||| | ||||||||||  ||||||||||| || |||||  ||| ||| ||||| || | |  ||||||||  ||||||    
T  40131751 ctatgaaacacggacactccttggagtagacgtgtcccaatgtcagacacaagtcgtgtctgacatcgatacgacaccgatatttataattaaactgaat 40131652  T
Q  102 tatgtgatttcctcagattattagt 126  Q
    ||||||||||  ||| |||||||||    
T  40131651 tatgtgattttttcaaattattagt 40131627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 6471886 - 6471941
Alignment:
Q  70 acacgactccaacacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    ||||||| || |||||||||||||| |||||||||||||||| |||| ||||||||    
T  6471886 acacgacacccacacatataattacactgaattatgtgattttctcaaattattag 6471941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 15382592 - 15382533
Alignment:
Q  14 gacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||| | |||||||||||||| ||||  ||| |||||||||||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacac 15382533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 17123167 - 17123097
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgaca 72  Q
    |||||||||||||||||||||||||||| | |||||||| ||||| ||||  | | ||||||||||||||||    
T  17123167 actatgaagcacggacactcctcggattaggcgtgtccc-gtgtcggacatgtttcgtgtccaacaccgaca 17123097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 39205943 - 39205847
Alignment:
Q  69 gacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgt---cgtgtctgatgtctgtatccgtgcttcataga 163  Q
    |||||||| ||||||||||||||||| |  |||||| |||||| |||| ||||||||  ||||   |||||| | |||||||||||||||||||||||    
T  39205943 gacacgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgtcgacgtgtccg-tgtctgtatccgtgcttcataga 39205847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 21194063 - 21194129
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacacc 68  Q
    |||| |||||||||||||||||||||| | |||| ||||||||| ||||  ||| ||||||||||||    
T  21194063 ctataaagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacacc 21194129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16304365 - 16304426
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtcc 62  Q
    ||||||||||||||||| |||||||||| |||||||| ||||||| | ||| ||| ||||||    
T  16304365 actatgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgtcc 16304426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 23289998 - 23290047
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    |||||||||||||||| | || ||||| ||||||||||||||||||||||    
T  23289998 ctatgaagcacggacattgcttggattagacgtgtcccggtgtcagacac 23290047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 40000493 - 40000546
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgt 55  Q
    |||||||||||||||||||||| |||  |||||||| ||||||||| |||||||    
T  40000493 ctatgaagcacggacactcctcagataagacgtgtctcggtgtcaggcacatgt 40000546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 19820328 - 19820376
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagaca 50  Q
    |||||||||||||||||||||| |||| | |||||||||||||| ||||    
T  19820328 ctatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 22423803 - 22423871
Alignment:
Q  64 acaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtc 132  Q
    ||||||||||||| || ||| |||||||||   ||||||||||||||| |||| ||||||||| |||||    
T  22423803 acaccgacacgacaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgtc 22423871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 4105374 - 4105327
Alignment:
Q  6 gaagcacggacactcctcggatttgacgtgtcccggtgtcagacacat 53  Q
    ||||||||||||||||||||||| | |||||||| || ||||||||||    
T  4105374 gaagcacggacactcctcggattaggcgtgtcccagtatcagacacat 4105327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 42893479 - 42893408
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||| |||||||||||  ||| | ||||||| |||||| ||||| |||||||||  ||||||||||    
T  42893479 ctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacac 42893408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 43001922 - 43001859
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacac 67  Q
    ||||||||||||||||||||||||| | ||||||| |||||  ||||| ||| |||||| ||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacac 43001859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 3751902 - 3751984
Alignment:
Q  45 cagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtg 127  Q
    ||||||| ||| |||| |||||| |||||||  | ||||||||||||||  || | ||||||||||| |||| ||||||||||    
T  3751902 cagacacgtgtcgtgttcaacactgacacgatactaacacatataattatacttagttatgtgattttctcaaattattagtg 3751984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19429547 - 19429497
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    |||||||||||| |||||| || ||||| |||||| |||||||||||||||    
T  19429547 actatgaagcacagacacttcttggattagacgtgacccggtgtcagacac 19429497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 23015926 - 23015984
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtcc 62  Q
    ||||||| ||||||||||||||||| | ||||||||  |||| ||||||||| ||||||    
T  23015926 atgaagctcggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtcc 23015984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 30502396 - 30502446
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgt 131  Q
    |||||||||||||| |||||||| ||||||| |||| |||||||| |||||    
T  30502396 acacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 30542739 - 30542789
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgt 131  Q
    |||||||||||||| |||||||| ||||||| |||| |||||||| |||||    
T  30542739 acacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 17088402 - 17088361
Alignment:
Q  10 cacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    ||||||||||||||||||| | |||||||||||||| |||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggacac 17088361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 31084447 - 31084382
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacac 67  Q
    ||||||| ||||||||||||||||||| | | |||||| ||||| ||||| ||| |||||| ||||    
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacac 31084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 36838605 - 36838544
Alignment:
Q  70 acacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgt 131  Q
    ||||||| || |||||||||||||| || |||||||| |||| |||| |||||||| |||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 6035549 - 6035482
Alignment:
Q  65 caccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||| || ||| |||||||||| ||||||||| | |||| |||| |||||||| |||||||    
T  6035549 caccgacacgacaccgacaaatataattacactgaattatattattt-ctcaaattattagcggtgtcg 6035482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 10298669 - 10298633
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcc 38  Q
    ||||||||||||||||||||||||||| | |||||||    
T  10298669 ctatgaagcacggacactcctcggattaggcgtgtcc 10298633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 22423764 - 22423800
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcc 38  Q
    ||||||||||||||||||||||||||| | |||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgtcc 22423800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 28588682 - 28588734
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||| ||||||||| |||||||||||||||| |||| |||||||  |||||||    
T  28588682 acacctataattacactgaattatgtgattttctcaaattattaccggtgtcg 28588734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 30098977 - 30099049
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||| |||||||| |||||||| ||||  | |||||||| ||||||||||| ||| || ||| ||||||||||    
T  30098977 actacgaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacac 30099049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 38464313 - 38464361
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagaca 50  Q
    ||||||||||| ||||||||||||||| |  ||||||||||||| ||||    
T  38464313 ctatgaagcacagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 44860449 - 44860320
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    |||||||||||||||||||||| ||| |  |||||||| |||| ||||||||| |||||||||||| ||||||| || |||||||||||||| |||||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaatt 44860350  T
Q  103 atgtgatttcctcagattattagtggtgtc 132  Q
    ||| ||||| |||| |||||||| ||||||    
T  44860349 atgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 24975255 - 24975389
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||||||||||| |||| ||  |||||| ||||| |||||||| ||||||  |||| |||||||| || || |||||| |||| ||||||    
T  24975255 ctatgaagcacggacactcctcagattagatttgtcccagtgtcggacacatg-tgtgtctgacacggacacgacaccgacgcatatatttacactgaat 24975353  T
Q  102 tatgtgatttcctcagattattagtggtgtcgtgtc 137  Q
    |||  ||||| |||| |||||||| |||||||||||    
T  24975354 tatacgattttctcaaattattagcggtgtcgtgtc 24975389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 35056998 - 35056896
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||||||||||| |||| | |||||  | ||||| ||||| ||| |||||| ||||||||||||| || |||||||||||||| ||||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaat 35056899  T
Q  102 tat 104  Q
    |||    
T  35056898 tat 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 42511322 - 42511411
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataatt 92  Q
    ||||||||||||||||||||||||||| | |||||||| ||||| ||||| |||||||||| |||| || ||||| |||||||||||||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacactga-acgacaccaacacatataatt 42511411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 34784911 - 34785020
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||| ||||||||||| ||  | |||||||| ||||||||||  ||| |||||| | ||||||||||| || |||||||||||||| || |||    
T  34784911 ctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaat 34785010  T
Q  102 tatgtgattt 111  Q
    ||||||||||    
T  34785011 tatgtgattt 34785020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 37419873 - 37419764
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||||||||||| | |||||||||||||| |||||   | |||||| ||||||||||||| ||  ||| | ||||||| ||||||    
T  37419873 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaat 37419774  T
Q  102 tatgtgattt 111  Q
    | ||||||||    
T  37419773 tttgtgattt 37419764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 11223793 - 11223901
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||||  ||| |||||| ||||| ||| ||| || |||| | ||||||| ||||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaat 11223891  T
Q  102 tatgtgattt 111  Q
    ||||| ||||    
T  11223892 tatgttattt 11223901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 36756275 - 36756404
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatta 103  Q
    ||||||||| ||||||||| ||||| | |||||  ||||||| ||||  |||||||| | ||||  ||||||| || |||| ||||||||| ||||||||    
T  36756275 atgaagcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaatta 36756374  T
Q  104 tgtgatttcctcagattattagtggtgtcg 133  Q
    ||| ||||| ||| ||||||||| ||||||    
T  36756375 tgttatttcttcaaattattagttgtgtcg 36756404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 12668352 - 12668476
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||| |||||||| ||| |  |||||||  ||||||| || ||| || ||||| ||||||||||| || |||| ||||||||| ||||||    
T  12668352 ctatgaagcacggatactcctcgaattaggtgtgtcccaatgtcagatacgtgtcgtatccaataccgacacgacaccgacacttataattacactgaat 12668451  T
Q  102 tatgtgatttcctcagattattagt 126  Q
    ||||| ||||  ||| |||||||||    
T  12668452 tatgtcattttttcaaattattagt 12668476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 17776714 - 17776590
Alignment:
Q  5 tgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattat 104  Q
    |||||||||||||||||||||||| | | |||||||  ||| |||||| || |||||||||||||||  ||| |  |||||||||||||| |||| ||||    
T  17776714 tgaagcacggacactcctcggattaggcctgtcccgaggtcggacacacgtcgtgtccaacaccgacttgacactgacacatataattacactgacttat 17776615  T
Q  105 gtgatttcctcagattattagtggt 129  Q
    ||| ||| || | ||||||| ||||    
T  17776614 gtggttttcttaaattattattggt 17776590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 19942382 - 19942314
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgaca 72  Q
    |||||||| |||||||||||||||| | |||||||||||||||||||||||  |||||| |||||||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38117098 - 38117170
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||||| ||||||||| | |||||||||||||| ||||| |||||||||| ||||| ||||    
T  38117098 actatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacac 38117170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 30717459 - 30717582
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||||| ||||| | ||| |||| |||||  |||| ||| |||||| ||| |||||||||  | |||| | ||||||| ||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 30717558  T
Q  102 tatgtgatttcctcagattattag 125  Q
    ||||||||||  ||| ||||||||    
T  30717559 tatgtgattttttcaaattattag 30717582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 22084756 - 22084883
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtccc---ggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatat--aattaccc 96  Q
    ||||||||||| ||||||| ||||||| | ||||||||   |||||||||||| |||||||||| |||| |||||||  ||  |||||||  |||||| |    
T  22084756 ctatgaagcacagacactcatcggattaggcgtgtcccggtggtgtcagacacgtgttgtgtccgacactgacacgataccggcacatataaaattacac 22084855  T
Q  97 tgaattatgtgatttcctcagattatta 124  Q
    |||||||| |||||| |||| |||||||    
T  22084856 tgaattatatgattttctcaaattatta 22084883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 36096303 - 36096413
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    |||||||||||||||||||| | || |  | |||||||| ||||||||||| ||| |||||| ||| ||||||||| || ||| |||||||||| ||| |    
T  36096303 actatgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgca 36096402  T
Q  101 ttatgtgattt 111  Q
    || ||||||||    
T  36096403 ttttgtgattt 36096413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 2438661 - 2438730
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||||||||| | |||||||||||||| ||||  ||| |||||| ||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 2438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 26769641 - 26769549
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattac 94  Q
    ||||||||||||||||||||||||||| | |||||||| ||||| ||||| ||| |||||| | ||||||| ||| || |||| | |||||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattac 26769549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 24009414 - 24009343
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||||| ||||  | |||||||| ||||||||||| ||| |||||| ||||||||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 24009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 2331922 - 2331795
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||| ||| |||| || | ||||| | ||||||| |||||||||||| || |||| || |||| |||||||| || ||||  |||| ||| ||||||    
T  2331922 ctatgaaacacagacattcattggattaggcgtgtcctggtgtcagacacgtgctgtgcccgacactgacacgacaccgacac--ataaatacactgaat 2331825  T
Q  102 tatgtgatttcctcagattattagtggtgt 131  Q
    |||||||||| |||| ||||||| ||||||    
T  2331824 tatgtgattttctcaaattattaatggtgt 2331795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 127
Target Start/End: Complemental strand, 5367243 - 5367197
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtg 127  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  5367243 acacatataattacactgaattatgtgatttcctcaaattattagtg 5367197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 28524517 - 28524447
Alignment:
Q  41 gtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgattt 111  Q
    ||||||||||| |||||||||| ||||| |||| ||  | |||||||||||||| ||||||||||||||||    
T  28524517 gtgtcagacacgtgttgtgtccgacaccaacacaacaacgacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 2665865 - 2665946
Alignment:
Q  48 acacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgt 131  Q
    |||| |||||||| |||||||||||| || ||  ||||||||||||| || ||||||||||||| || | ||||||||||||||    
T  2665865 acacgtgttgtgttcaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattagtggtgt 2665946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18840952 - 18841024
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||||||||||||||| |  ||||||||||||| ||||  ||| |||||  ||||||||||    
T  18840952 actatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacac 18841024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 21616813 - 21616761
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||| |||||||||||||||| |||| |||||||| |||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcg 21616761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 15657992 - 15657885
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatta 103  Q
    |||||||| |||||||||||||| | | |||||||||| ||| ||||| ||| | |||| ||| | ||||||| || |||  | ||||||| ||||||||    
T  15657992 atgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaatta 15657893  T
Q  104 tgtgattt 111  Q
    ||||||||    
T  15657892 tgtgattt 15657885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 20242667 - 20242738
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||| ||||||| ||||||  | |||||||  ||||||||||| |||||||||| ||||||||||    
T  20242667 ctatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacac 20242738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 10535685 - 10535735
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacaca 52  Q
    |||||||||||| |||||||||||||| | ||||||| |||||||||||||    
T  10535685 ctatgaagcacgaacactcctcggattaggcgtgtcctggtgtcagacaca 10535735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 28596587 - 28596517
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||||||||||||| |  ||||||  ||||| ||||| ||| |||||| ||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacac 28596517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 32749754 - 32749868
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||| |||||||||||  |||  | |||||||| ||||| |||||||||   |||| ||| ||||||||| |  |||| ||| ||||| ||||||    
T  32749754 ctatgaagcgcggacactccttagataaggcgtgtcccagtgtcggacacatgtcacgtccgacatcgacacgacactgacacttattattacactgaat 32749853  T
Q  102 tatgtgatttcctca 116  Q
    |||||||||| ||||    
T  32749854 tatgtgattttctca 32749868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 21782743 - 21782870
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactcca-ac--acatataattaccct 97  Q
    ||||||||||||||||||||| | |||| |||||||||||||||  ||||| ||| ||| |  ||||| |||| || | | ||   || |||||||| ||    
T  21782743 actatgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtcgtgcctgacaccaacacaacacgacaccggcacataattacact 21782842  T
Q  98 gaattatgtgatttcctcagattattag 125  Q
    |||||||||||||| |||| ||||||||    
T  21782843 gaattatgtgattttctcaaattattag 21782870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 23718077 - 23718025
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||| ||||||||||||| || |||| |||||||| |||||||    
T  23718077 acacatataattacactgaattatgtgactttctcaaattattagcggtgtcg 23718025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 24105749 - 24105697
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||| ||||||||||||| || |||| |||||||| |||||||    
T  24105749 acacatataattacactgaattatgtgactttctcaaattattagcggtgtcg 24105697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 37411252 - 37411304
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||||| || |||||||||||||||| |||| |||||||| |||||||    
T  37411252 acacatataatcacactgaattatgtgattttctcaaattattagcggtgtcg 37411304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 5040845 - 5040782
Alignment:
Q  10 cacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||| ||| | | |||||||||| ||| ||||||||| |||||| ||||||||||    
T  5040845 cacggacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacac 5040782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 15972992 - 15972921
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||| || ||||||| |  ||||||||| ||| ||||| ||| |||||| ||||||||||    
T  15972992 ctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacac 15972921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 37559096 - 37559025
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||||||||||||||   ||||| |||||||| ||||| |||   |||| ||||||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacac 37559025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 4207986 - 4207857
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||| || | |||||| |||||||  ||||||  |||||||  |||| ||| |||||| ||||||||||||  || ||| |||||||||| || |||    
T  4207986 ctatgaaacatgaacactcttcggattaaacgtgtttcggtgtcgaacacgtgtcgtgtccgacaccgacacgataccgaca-atataattacactaaat 4207888  T
Q  102 tatgtgatttcctcagattattagtggtgtc 132  Q
    |||| | |||  ||| |||||||||||||||    
T  4207887 tatgcgcttttttcaaattattagtggtgtc 4207857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 18422548 - 18422582
Alignment:
Q  128 gtgtcgtgtctgatgtctgtatccgtgcttcatag 162  Q
    |||||||||||||||||||||||||||||| ||||    
T  18422548 gtgtcgtgtctgatgtctgtatccgtgctttatag 18422582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 18622669 - 18622627
Alignment:
Q  69 gacacgactccaacacatataattaccctgaattatgtgattt 111  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||    
T  18622669 gacacgacaccaacacgtataattacactgaattatgtgattt 18622627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 28677958 - 28677908
Alignment:
Q  83 acatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||| ||||||||||||||||  ||| |||||||| |||||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggtgtcg 28677908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 38355817 - 38355930
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||  |||||||   ||| ||| | |||  ||||| |||||| ||||||||| | | ||| || ||||||||||| || ||||||    
T  38355817 ctatgaagcacggacacttttcggattaaccgtctccag-tgttggacacgtgttgtatccaacaccaatatgacaccgacacatataatcacactgaat 38355915  T
Q  102 tatgtgatttcctca 116  Q
    |||||||||| ||||    
T  38355916 tatgtgattttctca 38355930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15907850 - 15907894
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtc 45  Q
    |||||||||||||||||||| || |||| | ||||||||||||||    
T  15907850 actatgaagcacggacactcatcagattgggcgtgtcccggtgtc 15907894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 23354582 - 23354629
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    |||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  23354582 tatgaaccacggacactcctcggattaggcgtgtccc-gtgtcagacac 23354629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 25846787 - 25846743
Alignment:
Q  86 tataattaccctgaattatgtgatttcctcagattattagtggtg 130  Q
    ||||||||| |||||| ||||||||| |||| |||||||||||||    
T  25846787 tataattacactgaatcatgtgattttctcaaattattagtggtg 25846743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 31808128 - 31808076
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||| ||||||||||||||||  | | |||||||| |||||||    
T  31808128 acacatataattacactgaattatgtgattttgttaaattattagcggtgtcg 31808076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 3e-30; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 22652106 - 22651983
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||| ||||||||||||| || |||| | ||||||   |||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaat 22652007  T
Q  102 tatgtgatttcctcagattattag 125  Q
    ||||||||||  ||| ||||||||    
T  22652006 tatgtgattttttcaaattattag 22651983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 29447574 - 29447467
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||||||||||| |||| ||| |||||||||||| ||||||||| |||||  ||||||||||||| ||||||||||||||||| || |||    
T  29447574 ctatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacacgacaccaacacatataattacacttaat 29447475  T
Q  102 tatgtgat 109  Q
    ||||||||    
T  29447474 tatgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 11803390 - 11803267
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    |||||||||||||||||||||||||||| ||||||| || ||||| ||||  ||| || ||||||||| |||| || ||||||||||||||||| |||||    
T  11803390 actatgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacaccaacacaacaccaacacatataattacactgaa 11803291  T
Q  101 ttatgtgatttcctcagattatta 124  Q
    ||||||||||| || | |||||||    
T  11803290 ttatgtgattttcttaaattatta 11803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 29447040 - 29447170
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    |||||||||||||||||||| ||||| | ||||||| |||||||||||||||| |||||| ||||||||| ||| || |||| | || ||||  ||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaatt 29447139  T
Q  103 atgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||| |||| ||||||||| ||||||    
T  29447140 atgtgattttctcaaattattagttgtgtcg 29447170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 15816058 - 15816189
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||||||| |||||||| | |||||||||||||| ||  | ||| |||||| ||||| ||||||| || |||| ||||||||| || |||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaat 15816157  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||||  ||| ||||||||| ||||||    
T  15816158 tatgtgattttttcaaattattagttgtgtcg 15816189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 26902104 - 26902213
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||||||||||| |||  | |||||||| ||| ||||||| ||| |||||| ||||  | ||||| || |||||||||||||| ||||||    
T  26902104 ctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaat 26902203  T
Q  102 tatgtgattt 111  Q
    ||||||||||    
T  26902204 tatgtgattt 26902213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 29510233 - 29510356
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||||||||||| |  ||||||||||||| |||||  || |||||| |||||||||| || || |||| | ||||||  ||||||    
T  29510233 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaat 29510332  T
Q  102 tatgtgatttcctcagattattag 125  Q
    | ||||||||  ||| ||||||||    
T  29510333 tttgtgattttttcaaattattag 29510356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 11927015 - 11927137
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||| ||||||| | |||||| || |||  || |||||| ||||   ||||| ||||||| || |||||||||||||| ||||||    
T  11927015 ctatgaagcacggacactcatcggattaggcgtgtctcgatgttggatacatgtcgtgtatgacaccaacacgacaccgacacatataattacactgaat 11927114  T
Q  102 tatgtgatttcctcagattatta 124  Q
    ||||||||||  ||| |||||||    
T  11927115 tatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 27067230 - 27067358
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    |||||||||||||||||||||||||||| |||  || |||||||  ||||||||| |||||| ||||||||||||| |  |||| | ||||||  | |||    
T  27067230 actatgaagcacggacactcctcggattagac--gttccggtgttcgacacatgtcgtgtccgacaccgacacgacactgacacttgtaatta--cagaa 27067325  T
Q  101 ttatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||| |||| |||| || |||||||||||||    
T  27067326 ttatgtaattttctcaaatcattagtggtgtcg 27067358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 24205749 - 24205840
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattac 94  Q
    |||||| ||||||||||||||||||| | ||||| |||||||||||||   ||||||| | |||||||||| || ||||||||||| |||||    
T  24205749 tatgaaacacggacactcctcggattaggcgtgttccggtgtcagacatgcgttgtgttcgacaccgacacaacaccaacacatattattac 24205840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 34450960 - 34451075
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactcca-----acacatataattacc 95  Q
    |||||||||||||||||||||| ||||  | |||||||| ||||||||||| ||| |||||| ||||||||||||| | |     ||||||||||||||     
T  34450960 actatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacgacacgacaccgacacatataattaca 34451059  T
Q  96 ctgaattatgtgattt 111  Q
    ||| ||| ||||||||    
T  34451060 ctgcattttgtgattt 34451075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 11944795 - 11944673
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||| |||||| ||||||| | |||||| ||||||| || |||||| ||||   ||| | ||||||| || |||||||||||||| |||| |    
T  11944795 ctatgaagcacgaacactcatcggattaggcgtgtctcggtgtcggatacatgtcgtgtatgacatcaacacgacaccgacacatataattacactgagt 11944696  T
Q  102 tatgtgatttcctcagattatta 124  Q
    ||||||||||  ||| |||||||    
T  11944695 tatgtgattttatcaaattatta 11944673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 16641908 - 16642033
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    |||||||||||| ||||||||||||||| |  |||||||||||| |||||||||| ||||      |||||||||| || ||||||||||  || || ||    
T  16641908 actatgaagcacagacactcctcggattaggtgtgtcccggtgttagacacatgtcgtgt------ccgacacgacaccgacacatataacgacactaaa 16642001  T
Q  101 ttatgtgatttcctcagattattagtggtgtc 132  Q
    |||||||  || |||| ||||||||| |||||    
T  16642002 ttatgtgtatttctcaaattattagttgtgtc 16642033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 37283754 - 37283867
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    |||||||||||||| ||||||||||||| |||||||||||||   |||||| ||| |||||| ||||||||||             |||||||| |||||    
T  37283754 actatgaagcacgggcactcctcggattagacgtgtcccggt---agacacgtgtcgtgtcccacaccgacac-------------ataattacactgaa 37283837  T
Q  101 ttatgtgatttcctcagattattagtggtg 130  Q
    ||||||||||| ||||||||||||| ||||    
T  37283838 ttatgtgattttctcagattattagcggtg 37283867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 3025668 - 3025599
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||||||||| | |||||| | ||||||||||| ||| |||||| |||| |||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacac 3025599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 18964309 - 18964198
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacg--actccaacacatataattaccctga 99  Q
    ||||||||||| ||||||||||||||  | |||||| | |||| |||||  ||| |||| |||| ||||||||  || || ||||||||||||||  |||    
T  18964309 ctatgaagcacagacactcctcggataaggcgtgtctccgtgttagacaggtgtcgtgttcaacgccgacacgacacaccgacacatataattacattga 18964210  T
Q  100 attatgtgattt 111  Q
    ||||||||||||    
T  18964209 attatgtgattt 18964198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 34897136 - 34897084
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||| |||||||||||||||| |||| |||||||| |||||||    
T  34897136 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcg 34897084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 5813707 - 5813640
Alignment:
Q  6 gaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||  ||| | |||||||||||||| ||||| ||| |||||| ||||||||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 5813640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 21465542 - 21465419
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||||||  ||| | ||| |||| ||||  ||||| ||| |||||| |||| |||||||| ||||||| | |||||||   ||||    
T  21465542 ctatgaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacacgacaccaacacttgtaattacatcgaat 21465443  T
Q  102 tatgtgatttcctcagattattag 125  Q
    ||| ||||||  ||| ||||||||    
T  21465442 tatatgattttttcaaattattag 21465419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 27213644 - 27213593
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacat 53  Q
    |||||||||||||||||| |||||||| | |||||||||||||| |||||||    
T  27213644 ctatgaagcacggacacttctcggattagccgtgtcccggtgtccgacacat 27213593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 40064081 - 40064031
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacaca 52  Q
    ||||| ||||||||||||||||||||| || ||||||||||||| ||||||    
T  40064081 ctatgtagcacggacactcctcggattagatgtgtcccggtgtcggacaca 40064031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 43737752 - 43737822
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||||||| ||||  | ||| |||| ||||||||||| ||| |||||| ||||||||||    
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacac 43737822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 8343086 - 8343033
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgt 55  Q
    ||||||||||| ||||||| ||||||| | |||||||||||||| |||||||||    
T  8343086 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacatgt 8343033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 12606837 - 12606918
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcgtgtctgatgtctgtatccgtgcttcatag 162  Q
    ||||||||||||||  |||||||| |||||| |||| ||||||||  |||||||||| |||||| || || || ||||||||    
T  12606837 acacatataattacattgaattatatgattttctcaaattattagcagtgtcgtgtccgatgtccgtgtctgtacttcatag 12606918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 24362193 - 24362262
Alignment:
Q  64 acaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||    |||||||||||||| |||||||||||||||  |||| |||||||| |||||||    
T  24362193 acaccgacacgacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtcg 24362262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 2572016 - 2572108
Alignment:
Q  33 gtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    |||||||||| || ||||| ||| |||||| |||| |||||||| || |||| | ||||||| || |||||||||||||  ||| ||||||||    
T  2572016 gtgtcccggtatcggacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 2572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 4786346 - 4786398
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||| |||||||||||||||| || | ||||||| ||||||||    
T  4786346 acacatataattacactgaattatgtgattttcttaaattattaatggtgtcg 4786398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 7658510 - 7658462
Alignment:
Q  85 atataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||| ||||||||||| |||| |||| ||||||||||||||||    
T  7658510 atataattacactgaattatgtaattttctcaaattattagtggtgtcg 7658462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17751776 - 17751732
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtc 45  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||    
T  17751776 actatgaagcgcggacactcctcggattaggcgtgtcccggtgtc 17751732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17760763 - 17760719
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtc 45  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||    
T  17760763 actatgaagcgcggacactcctcggattaggcgtgtcccggtgtc 17760719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 40332307 - 40332239
Alignment:
Q  5 tgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||| ||||||||||||||||||| | || ||||||||||  ||||| ||| |||||| ||||||||||    
T  40332307 tgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacac 40332239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 3951476 - 3951547
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||| |||||| ||||| | ||||| || ||||||||||| ||| |||||  ||||||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacac 3951547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 8343446 - 8343387
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtc 61  Q
    ||||||||||| ||||||| ||||||| | |||||||||||||| ||||| ||| |||||    
T  8343446 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 8343387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 33405324 - 33405395
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||| ||||||||||||| | ||||| | ||||||| |||||||||||  ||| |||||| ||||||||||    
T  33405324 ctatggagcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacac 33405395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 36450694 - 36450765
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||| ||||||||||||||| | ||||||| |||||| |||||  || |||||| ||||| ||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacac 36450765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 39954288 - 39954339
Alignment:
Q  82 cacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||||||| || ||||||||||||| |||| |||||||| |||||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattattagcggtgtcg 39954339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 4611583 - 4611533
Alignment:
Q  83 acatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||| ||||||||||| |||| |||| |||||||| |||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagcggtgtcg 4611533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 132
Target Start/End: Original strand, 12570664 - 12570793
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||| ||||||||||| || || |||| | ||||||| |||||| ||||| ||| |||||  ||||||| || || |||||| |||||||||| || |||    
T  12570664 ctataaagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgatac-acaccaacatatataattacacttaat 12570762  T
Q  102 tatgtgatttcctcagattattagtggtgtc 132  Q
    |||| | ||| || | |||||||| ||||||    
T  12570763 tatgcgtttttcttaaattattagcggtgtc 12570793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 20785473 - 20785523
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgt 131  Q
    ||||||||||||||  | |||||||||||||||||| |||||||| |||||    
T  20785473 acacatataattacattaaattatgtgatttcctcaaattattagcggtgt 20785523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 24413499 - 24413537
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccg 40  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  24413499 ctatgaagcacggacacttctcggattagacgtgtcccg 24413537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 28745628 - 28745554
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgac 76  Q
    ||||||||||||||||||||| | ||| ||| |||| ||||| | ||||  ||| |||||| |||||||||||||    
T  28745628 ctatgaagcacggacactccttgaattagacttgtctcggtgacggacaggtgtcgtgtccgacaccgacacgac 28745554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 926730 - 926799
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||||||||    | |||||||||||| ||||| ||| | |||| ||||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacac 926799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 14134746 - 14134705
Alignment:
Q  85 atataattaccctgaattatgtgatttcctcagattattagt 126  Q
    |||||||||| |||||||||||||||| |||| |||||||||    
T  14134746 atataattacactgaattatgtgattttctcaaattattagt 14134705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 16988030 - 16987977
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttg 57  Q
    ||||||||||||||||||||||||| |  ||||||||||||  | |||||||||    
T  16988030 atgaagcacggacactcctcggattaggggtgtcccggtgttgggcacatgttg 16987977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 20679337 - 20679406
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||| ||||||||||||| |  | |||||||||||||| ||||| ||||| |||  ||||||||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacac 20679406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 36934730 - 36934669
Alignment:
Q  72 acgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||| |||||||||||||||||  |||||||||||||||  ||  |||||||| |||||||    
T  36934730 acgacgccaacacatataattacaatgaattatgtgattttttcgaattattagcggtgtcg 36934669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 7472523 - 7472575
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||| || | |||||||||||| | | ||||||||||||||||    
T  7472523 acacatataattacactaatttatgtgatttctttaaattattagtggtgtcg 7472575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 13844604 - 13844648
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    |||||||||||||| || ||||||||||||| |||| ||||||||    
T  13844604 acacatataattacactcaattatgtgattttctcaaattattag 13844648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 14731763 - 14731719
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    |||||||||||||| || ||||||||||||| |||| ||||||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattag 14731719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 22943301 - 22943349
Alignment:
Q  14 gacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtcc 62  Q
    ||||||||||||||| | |||||||||||||| ||||| ||| ||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 22943349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 31109463 - 31109507
Alignment:
Q  7 aagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    |||||||||||||||||||||| | |||||||| |||||| ||||    
T  31109463 aagcacggacactcctcggattaggcgtgtcccagtgtcatacac 31109507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 31236585 - 31236629
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    ||||||||||||||  ||||||||||||||| |||| ||||||||    
T  31236585 acacatataattacattgaattatgtgattttctcaaattattag 31236629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 9678 - 9807
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatta 103  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||  ||| |||||  ||||| ||||||| || |||||||||||||| ||||||||    
T  9678 atgaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaatta 9777  T
Q  104 tgtgatttcctcagattattagtggtgtcg 133  Q
     ||||||| |||| ||||||||||| ||||    
T  9778 agtgattttctcaaattattagtggcgtcg 9807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 4987222 - 4987343
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatta 103  Q
    |||||| |||||||||||||||||| | |||||||||||||| ||||| ||| |||||||||||||||||| | ||||||| | ||||||| ||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaatta 4987321  T
Q  104 tgtgatttcctcagattattag 125  Q
    ||||||||  ||| ||||||||    
T  4987322 tgtgattttttcaaattattag 4987343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 17005547 - 17005677
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    ||||||||||||  |||||||||||||| || |||||| |||||||||||| |||| ||||  ||||| |||| || || |||| ||||||||| |||||    
T  17005547 actatgaagcacaaacactcctcggattagaggtgtcctggtgtcagacacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaa 17005646  T
Q  101 ttatgtgatttcctcagattattagtggtgt 131  Q
    |||| ||||||  ||| ||||||||||||||    
T  17005647 ttatatgattttatcaaattattagtggtgt 17005677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 34185051 - 34185161
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    |||||||||||||||||||||||||||| | |||||||||||||| |||||||||  ||||| |||  |||||||| || |||| | ||||||| |||||    
T  34185051 actatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaa 34185150  T
Q  101 ttatgtgattt 111  Q
    || ||||||||    
T  34185151 ttgtgtgattt 34185161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 20503584 - 20503513
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||  ||| |||||||||||||||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacac 20503513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 8039763 - 8039893
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    |||||||||||| || |||| |||||||   |||||||||||||| ||||  | |  ||||| ||||||||||||| || |||||||||||||| |||||    
T  8039763 actatgaagcacagatactcttcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaa 8039862  T
Q  101 ttatgtgatttcctcagattattagtggtgt 131  Q
    |||| | |||| |||| |||||||| |||||    
T  8039863 ttatataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 14829816 - 14829710
Alignment:
Q  6 gaagcacggacactcctcggatttgacgtgtcccggtgtcagac-acatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattat 104  Q
    |||||||||||| ||||| |||| | ||||||||||||||  || |||| | |||||||||||||||||||| || |||| | |||||||| ||||||||    
T  14829816 gaagcacggacattcctcagattaggcgtgtcccggtgtcgaaccacatctcgtgtccaacaccgacacgacaccgacacttgtaattaccatgaattat 14829717  T
Q  105 gtgattt 111  Q
    |||||||    
T  14829716 gtgattt 14829710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 25065038 - 25064908
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    |||||| |||||| |||||||||||||    |||||||||||||||||||| ||| |||||| ||||| ||||||  |||||||  |||||||| || ||    
T  25065038 actatggagcacgaacactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacaccaacacgataccaacac--ataattacactaaa 25064941  T
Q  101 ttatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||  ||| || ||||| |||||||    
T  25064940 ttatgtgattttttcaaatcattagcggtgtcg 25064908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 41961579 - 41961703
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||||||| |||||||| | |||||||| ||||| ||||| ||| |||||| | ||||||||||| || |||| | ||||||| | ||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaat 41961678  T
Q  102 tatgtgatttcctcagattattagt 126  Q
     ||||||| |  ||| |||||||||    
T  41961679 aatgtgatattttcaaattattagt 41961703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 55401194 - 55401123
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||||||||||| | |||||| ||||||| ||||| ||| |||||| ||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 55401123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 34910435 - 34910277
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    |||||||||||||||||||||||||| |||||||||||||||||           ||||| ||||||| ||||| || || | | ||||||| |||||||    
T  34910435 tatgaagcacggacactcctcggattagacgtgtcccggtgtca-----------tgtccgacaccgatacgacaccgactcttgtaattacactgaatt 34910347  T
Q  103 atgtgatttcctcagattattagt--------ggtgtcgtgtctgatgtctgtatccgtgcttcatagat 164  Q
    |||||||||  ||| |||||||||         |||||||||||| |||| |||||||||||||||||||    
T  34910346 atgtgattttttcaaattattagttgtgtcggcgtgtcgtgtctggtgtccgtatccgtgcttcatagat 34910277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 10690193 - 10690321
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    ||||||||||  ||| |||||||||| |  ||||| | ||||||||||| |||||||||| ||||  | || |  || ||| |||||||||| |||||||    
T  10690193 tatgaagcacatacattcctcggattaggtgtgtcgccgtgtcagacacgtgttgtgtccgacactaa-acaataccgacaaatataattacactgaatt 10690291  T
Q  103 atgtgatttcctcagattattagtggtgtc 132  Q
    ||||||||| ||||||||||||| ||||||    
T  10690292 atgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 13806363 - 13806275
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataatta 93  Q
    ||||||||||||||||| ||||||| | |||||||||| ||| | ||  ||||||||| |||||||||||||| || |||||||||||||    
T  13806363 atgaagcacggacactc-tcggattaggcgtgtcccggggtcggtcatgtgttgtgtctaacaccgacacgacaccgacacatataatta 13806275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 11666070 - 11665951
Alignment:
Q  6 gaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatg 105  Q
    ||||||||||||||||| | ||| | ||||| ||| | |||||||| ||| ||||| |||| | ||||||| || |||||||||||||| || |||| ||    
T  11666070 gaagcacggacactccttgaattaggcgtgttccgatatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtg 11665971  T
Q  106 tgatttcctcagattattag 125  Q
    ||||||  ||| ||||||||    
T  11665970 tgattttatcaaattattag 11665951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 14209243 - 14209112
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||||||| || ||||| |  || ||||| ||||  |||| ||| |||||| ||||||||||||| |  |||| | ||||||| ||||||    
T  14209243 ctatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaat 14209144  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||||  | | ||||||||| ||||||    
T  14209143 tatgtgattttttaaaattattagttgtgtcg 14209112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 28812645 - 28812514
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||| |||| ||||||||||||||| | ||||||| | |||| ||||  | | |||||  ||||| ||||||| || |||| | ||| ||| ||||||    
T  28812645 ctatgaggcacagacactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaat 28812546  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||||| ||| ||||||||| ||||||    
T  28812545 tatgtgatttcttcaaattattagttgtgtcg 28812514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 40993275 - 40993346
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||| |||||||||||||||| | |||||||||||||| ||||  ||| |||||| ||||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 40993346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 15796223 - 15796345
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||| |||||| | ||||| | ||||| |||||||  ||||| |||||||||| ||||| ||||||| || |||  | ||||||| ||||||    
T  15796223 ctatgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaat 15796322  T
Q  102 tatgtgatttcctcagattatta 124  Q
    ||| ||||||  ||| |||||||    
T  15796323 tatatgattttttcaaattatta 15796345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 11493372 - 11493421
Alignment:
Q  84 catataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||||| |||||||||||||||| |||| ||||||||||||||||    
T  11493372 catataattacactgaattatgtgattttctcacattattagtggtgtcg 11493421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 16192741 - 16192810
Alignment:
Q  64 acaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||  |||||||||||||||| ||||||||||| |||| |||| |||||||  |||||||    
T  16192741 acaccgacacgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgtcg 16192810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 29508567 - 29508447
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatta 103  Q
    |||||||||||||||| || ||||| |||||||||||||||| |||   ||| |||||| ||||| |||      | |||||||||||||| ||||||||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacaccaaca-----tcgacacatataattacactgaatta 29508473  T
Q  104 tgtgatttcctcagattattagtggt 129  Q
    | ||||||  ||| ||||||||||||    
T  29508472 tatgattttttcaaattattagtggt 29508447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35223058 - 35222986
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||||||||||||||    |||||||| ||||||||||| |||  ||||| ||||||||||    
T  35223058 actatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacac 35222986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 27505370 - 27505311
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtc 61  Q
    ||||||||||||||||||||||||||| | | |||||||||||| ||||| ||| |||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtc 27505311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 12704056 - 12704006
Alignment:
Q  83 acatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||| |||||||||||| ||| |||| ||||||||||||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgtcg 12704006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 25948881 - 25948939
Alignment:
Q  67 ccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||||  ||| ||||||||    
T  25948881 ccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattag 25948939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 37991499 - 37991465
Alignment:
Q  128 gtgtcgtgtctgatgtctgtatccgtgcttcatag 162  Q
    |||||||||||||||||||||||||||||||||||    
T  37991499 gtgtcgtgtctgatgtctgtatccgtgcttcatag 37991465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 11313795 - 11313852
Alignment:
Q  68 cgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    ||||||||| | ||||||||||||||| || ||||||||||||| |||| ||||||||    
T  11313795 cgacacgacactaacacatataattacactaaattatgtgattttctcaaattattag 11313852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 40052431 - 40052382
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    |||||||||||| |||||||||||||| | |||||||||||||| |||||    
T  40052431 ctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacac 40052382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 2620004 - 2620113
Alignment:
Q  22 tcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagatta 121  Q
    ||||||| | ||||||||| || | ||||  ||| ||||| ||||||| |||||| ||||||||||   |||| || ||||||||||||| |||| || |    
T  2620004 tcggattaggcgtgtcccgatgccggacatgtgtcgtgtctaacaccgccacgacaccaacacatag--ttacacttaattatgtgattttctcaaatga 2620101  T
Q  122 ttagtggtgtcg 133  Q
    ||||||||||||    
T  2620102 ttagtggtgtcg 2620113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 4466539 - 4466607
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccg 69  Q
    |||||||||||||||||||||||| ||  | |||||||| ||||| ||||||| |||| ||| ||||||    
T  4466539 actatgaagcacggacactcctcgaataagccgtgtcccagtgtcggacacatcttgtatccgacaccg 4466607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 7928501 - 7928449
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||| ||||||||||||||||  ||| |||||||| |||||||    
T  7928501 acacatataattacactgaattatgtgattttttcaaattattagcggtgtcg 7928449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 10955074 - 10955000
Alignment:
Q  2 ctatgaagcacggacact---cctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||   ||||||||| | |||||||| ||||| ||||| ||| |||||| ||||||||||    
T  10955074 ctatgaagcacggacactactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacac 10955000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 14979268 - 14979224
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtca 46  Q
    |||||||||||||||||||||||| || | |||||||||||||||    
T  14979268 ctatgaagcacggacactcctcgggttaggcgtgtcccggtgtca 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 26492145 - 26492213
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccga 70  Q
    ||||||||| |||||| |||||||||| ||||||||  |||||||||||  ||| |||||| |||||||    
T  26492145 ctatgaagcgcggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccga 26492213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 8789489 - 8789536
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagaca 50  Q
    |||||||||||||||||||||||||| | |||||| ||||||| ||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgaca 8789536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 11252095 - 11252024
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||| ||||||||||||||| | ||||| ||| || | ||||| |||||||||  ||||||||||    
T  11252095 ctatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacac 11252024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 13845465 - 13845536
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||||| ||||  | |||||| | ||||||||||| | | |||||| ||||||||||    
T  13845465 ctatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacac 13845536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 46191282 - 46191357
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgac 76  Q
    ||||||||||||  | ||| |||||||| | ||||||||||||||||| |||| ||||||||  ||| ||||||||    
T  46191282 actatgaagcacaaatacttctcggattaggcgtgtcccggtgtcagatacatattgtgtccggcactgacacgac 46191357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 14217021 - 14216915
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    ||||||||||||||||| |||||||| |  ||||||| |||||  |||| ||| |||||| ||||  ||||||| |  |||| | ||||||| |||||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaatt 14216922  T
Q  103 atgtgat 109  Q
    || ||||    
T  14216921 atatgat 14216915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 14223150 - 14223044
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    ||||||||||||||||| |||||||| |  ||||||| |||||  |||| ||| |||||| ||||  ||||||| |  |||| | ||||||| |||||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaatt 14223051  T
Q  103 atgtgat 109  Q
    || ||||    
T  14223050 atatgat 14223044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 11610628 - 11610579
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    |||||||||||||||||||||| |||| | ||||||||| |||| |||||    
T  11610628 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacac 11610579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 14832199 - 14832106
Alignment:
Q  32 cgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    |||||||||||||| ||||| ||| |||||| | ||||||||||| |  |||| | |||||||  ||| |||||||||||  ||| ||||||||    
T  14832199 cgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattag 14832106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 15314873 - 15314914
Alignment:
Q  70 acacgactccaacacatataattaccctgaattatgtgattt 111  Q
    ||||||| ||||||||||||||||| || |||||||||||||    
T  15314873 acacgacaccaacacatataattacactaaattatgtgattt 15314914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 15999951 - 16000008
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgt 60  Q
    ||||| |||||||||||||| ||||| | |||||||||||||| ||||| ||| ||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgt 16000008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 4990912 - 4990948
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcc 38  Q
    ||||||||||||||||||||||||||| | |||||||    
T  4990912 ctatgaagcacggacactcctcggattaggcgtgtcc 4990948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 29112292 - 29112369
Alignment:
Q  85 atataattaccctgaattatgtgatttcctcagattattagtggtgt---cgtgtctgatgtctgtatccgtgcttcat 160  Q
    |||||||||| ||||||||| |||||| |||| || |||||||||||   |||||| | |||| |||||||||||||||    
T  29112292 atataattacactgaattatatgattttctcaaataattagtggtgtcaacgtgtcag-tgtccgtatccgtgcttcat 29112369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 32804548 - 32804600
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||| || ||||||||||||| |||| |||||||  |||||||    
T  32804548 acacatataattacactaaattatgtgattttctcaaattattaacggtgtcg 32804600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 49505162 - 49505206
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    |||||||||||||| || ||||||||||||| |||| ||||||||    
T  49505162 acacatataattacactaaattatgtgattttctcaaattattag 49505206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 51206292 - 51206336
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtc 45  Q
    |||||||||||||||||||||| ||||| || || ||||||||||    
T  51206292 actatgaagcacggacactccttggattagaggtatcccggtgtc 51206336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 30982808 - 30982944
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    |||||||||||||||||| | ||||| | |||||||||||||| ||||| ||| |||||  ||||||||||||| || |||| ||||||||| ||||| |    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaat 30982907  T
Q  103 atgtgatttcctcagattattagtggtgtcgtgtctg 139  Q
    ||||||||| |||| || ||||| |||| ||||||||    
T  30982908 atgtgattttctcaaatcattagcggtggcgtgtctg 30982944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 24613630 - 24613761
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||||||| ||| |||||  ||||||||| ||| || |||| | || ||||  |||||    
T  24613630 ctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaat 24613729  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||| |||| ||||||||| ||||||    
T  24613730 tatgtgattttctcaaattattagttgtgtcg 24613761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 19482798 - 19482667
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||| |||||||||||||| |  ||||||| ||||| ||||| ||| |||||||| ||||||||||| ||||||| | ||||||| | ||||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaat 19482699  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||| |  ||| ||||||||| ||||||    
T  19482698 tatgtgatattttcaaattattagttgtgtcg 19482667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 36635449 - 36635325
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||| ||||||| | |||||||||||||| ||| | ||| |||||  ||||  ||||||     |||||||||||||| ||||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacacga-----acacatataattacactgaat 36635355  T
Q  102 tatgtgatttcctcagattattagtggtgt 131  Q
    |||||||||| |||| ||||||||||||||    
T  36635354 tatgtgattttctcaaattattagtggtgt 36635325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 904053 - 903930
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    ||||||||||| ||||| | || ||||| || ||||||| ||||| ||||||||| |||||||||||||| ||||  |  | |||||||||||| |||||    
T  904053 actatgaagcaaggacatttcttggattagatgtgtcccagtgtcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaa 903954  T
Q  101 ttatgtgatttcctcagattatta 124  Q
    ||||||||||| |||| |||||||    
T  903953 ttatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 22234819 - 22234928
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||| ||||| |||||||| |  |||||| |||||| ||||| ||| |||||  ||||||||||||| || ||||||| |||||| ||||||    
T  22234819 ctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaat 22234918  T
Q  102 tatgtgattt 111  Q
    ||||||||||    
T  22234919 tatgtgattt 22234928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 23292925 - 23292997
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||||||||||||||| | |||||||||||||| ||||| ||| |||||| ||||||||||    
T  23292925 actatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 23292997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 5414100 - 5414210
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    |||||||||||||||||||||| ||||  |  ||||||| ||||||||||| ||| |||||| |||| |||||||| || | |||||||||||| ||| |    
T  5414100 actatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgca 5414199  T
Q  101 ttatgtgattt 111  Q
    || ||||||||    
T  5414200 ttttgtgattt 5414210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 12895214 - 12895285
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||| |||||||||||||| | ||||||||| |||| || |||||| |||||| ||||||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacac 12895285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 44132603 - 44132682
Alignment:
Q  32 cgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgattt 111  Q
    |||||||  |||||||||||||||||||| | ||||| ||||||| || |||||||||||||  |||||||| |||||||    
T  44132603 cgtgtccatgtgtcagacacatgttgtgttcgacaccaacacgacaccgacacatataattatactgaattacgtgattt 44132682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 46083919 - 46084029
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    ||||||||||| |||||||||||  ||  | |||||||| | ||||||||| ||| |||||| | || |||||||| || |||||||||||||| ||  |    
T  46083919 actatgaagcatggacactcctcttataaggcgtgtccccgcgtcagacacgtgtcgtgtccgatactgacacgacaccgacacatataattacactaga 46084018  T
Q  101 ttatgtgattt 111  Q
    |||||||||||    
T  46084019 ttatgtgattt 46084029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 19500787 - 19500892
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||| |||||| ||||| | |||| | |||| |||||  | ||| |||||| ||||||||||||| ||| ||||||||||||| || ||     
T  19500787 ctatgaagcacggatactccttggattaggcgtgcctcggtatcagaggcgtgtcgtgtccgacaccgacacgacaccatcacatataattacactaaaa 19500886  T
Q  102 tatgtg 107  Q
    ||||||    
T  19500887 tatgtg 19500892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 5775353 - 5775421
Alignment:
Q  68 cgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcgtgt 136  Q
    ||||| ||| || |||||||||||||| || ||||||||||||| |||| ||||||| |||||||||||    
T  5775353 cgacatgacaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtcgtgt 5775421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 30299048 - 30299009
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccgg 41  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  30299048 ctatgaagcacggacactcctcggattagacgtgtcccgg 30299009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 30327916 - 30327877
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccgg 41  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  30327916 ctatgaagcacggacactcctcggattagacgtgtcccgg 30327877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 37203371 - 37203328
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtc 45  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  37203371 ctatgaagcacggacacttctcggattagacgtgtcccggtgtc 37203328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 15659754 - 15659812
Alignment:
Q  67 ccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    |||||||||| ||||||||||||||||| | |||||||| ||||| |||| ||||||||    
T  15659754 ccgacacgacaccaacacatataattacaccgaattatgagattttctcaaattattag 15659812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 38148684 - 38148785
Alignment:
Q  32 cgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgt 131  Q
    ||||| || |||||||| || ||| |||||||||||| |||||||  | |||  || |||||| |||||||||||||||| |||| | |||||| |||||    
T  38148684 cgtgttccagtgtcagatacgtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaattatgtgattttctcaaactattagcggtgt 38148783  T
Q  132 cg 133  Q
    ||    
T  38148784 cg 38148785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 715545 - 715593
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagaca 50  Q
    ||||||||||||||||||||||||||| | |||||||| ||||| ||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 715593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 752871 - 752919
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagaca 50  Q
    ||||||||||||||||||||||||||| | |||||||| ||||| ||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 752919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 3947702 - 3947766
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacac 67  Q
    |||||||||||||||||||||||||| |  |||||| |||||| ||||| ||| |||||| ||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacac 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12797277 - 12797349
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||| |||||||| ||| |||||||||| ||| |||||||||||||||||  | | |||||| ||||||||||    
T  12797277 actacgaagcacgaacattcctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgacac 12797349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12884346 - 12884390
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtc 45  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||    
T  12884346 actatgaagcacggacactcctcggattagacgtgccccgatgtc 12884390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 24343632 - 24343515
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgt-tgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    |||||||||||||||||||||| || | | |||||||||||||| |||||  ||  |||||  |||||||||||      |||| ||||||||| |||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacacg------acacctataattacactgaa 24343539  T
Q  101 ttatgtgatttcctcagattatta 124  Q
    |||||| |||| |||| |||||||    
T  24343538 ttatgtaattttctcaaattatta 24343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 40613501 - 40613449
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||| |||||||||||||||| |||| | |||||| |||||||    
T  40613501 acacatataattacactgaattatgtgattttctcaaaatattagcggtgtcg 40613449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 40784072 - 40784028
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtca 46  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||    
T  40784072 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtca 40784028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 2361915 - 2361986
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||| || |||| |  ||||| |||||||||||||  || |||||| ||||||||||    
T  2361915 ctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacac 2361986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 5775304 - 5775343
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccgg 41  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  5775304 ctatgaagcacggacactcctcggattaggcgtgtcccgg 5775343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 8423657 - 8423728
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgaca 72  Q
    ||||||| ||||||||||| ||| |||| | |||||||||||||| ||||  ||| |||||| |||||||||    
T  8423657 actatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgaca 8423728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 8423731 - 8423778
Alignment:
Q  86 tataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||| |||||||||||||||| |||| |||||||| |||||||    
T  8423731 tataattacactgaattatgtgattttctcaaattattagcggtgtcg 8423778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15724482 - 15724557
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgac 76  Q
    ||||||||||||  | |||||||||||| | |||||   |||||| ||||| |||||||||| |||||||||||||    
T  15724482 actatgaagcacataaactcctcggattaggcgtgttttggtgtctgacacgtgttgtgtccgacaccgacacgac 15724557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 22440609 - 22440660
Alignment:
Q  82 cacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||||||| |||||||||||||||| |||| |||||||  |||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgtcg 22440660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 34306744 - 34306815
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||| ||| ||||| |||| | |||||| ||||||| ||||| ||| |||||| ||||||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 34306815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 49431145 - 49431074
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||| ||||| |||||||||||||||  | |||||||||||||  ||||| ||| |||||| ||||||||||    
T  49431145 ctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacac 49431074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 53381530 - 53381573
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtc 45  Q
    ||||||||||||||||||||||||||| |  |||||||||||||    
T  53381530 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtc 53381573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 848080 - 847958
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    |||||| ||||||||||||| ||||| |  ||||||||||||  ||||| | | |||||| ||||| ||| ||| || |||| | ||||||   ||||||    
T  848080 tatgaaacacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaatt 847981  T
Q  103 atgtgatttcctcagattattag 125  Q
    |||| |||| |||| ||||||||    
T  847980 atgtaattttctcaaattattag 847958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 14465006 - 14465048
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtc 45  Q
    ||||||||||||||||||||| |||| |||||||||| |||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtc 14465048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 18513175 - 18513225
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacaca 52  Q
    |||||||||||||||||||||| |||| | ||||||| |||||| ||||||    
T  18513175 ctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacaca 18513225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 18576032 - 18576086
Alignment:
Q  68 cgacacgactccaacacatataattaccctgaattatgtgatttcctcagattat 122  Q
    ||||| ||| ||||||||||||||||| | |||||||||||||| |||| |||||    
T  18576032 cgacatgacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 28084640 - 28084594
Alignment:
Q  5 tgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    |||||||||||||||||||||||| | |||||||| ||||| |||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacac 28084594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 30838335 - 30838217
Alignment:
Q  7 aagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgt 106  Q
    ||||||||||||||||||| || | ||||||  |||||| ||||| ||| | |||| |||| |||||||| || | || ||||||||| || |||||| |    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacacgacaccgatacttataattacactaaattatat 30838236  T
Q  107 gatttcctcagattattag 125  Q
     ||||  ||| ||||||||    
T  30838235 aattttatcaaattattag 30838217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 30094132 - 30094083
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    ||||| ||||||||||||| ||||||| | |||||||||||||| |||||    
T  30094132 ctatgtagcacggacactcttcggattaggcgtgtcccggtgtccgacac 30094083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 40742659 - 40742590
Alignment:
Q  64 acaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||  | |||||||||||||| ||  ||||| |||||| |||| ||||||| ||||||||    
T  40742659 acaccgacacgacatcgacacatataattacactagattatatgattttctcaaattattaatggtgtcg 40742590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 824216 - 824252
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcc 38  Q
    |||||||||||||||| |||||||||| |||||||||    
T  824216 ctatgaagcacggacagtcctcggattagacgtgtcc 824252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 3712458 - 3712502
Alignment:
Q  7 aagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    ||||||||||||||||| |||| | |||||||||||||| |||||    
T  3712458 aagcacggacactcctcagattagccgtgtcccggtgtcggacac 3712502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 11596297 - 11596345
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagaca 50  Q
    |||||||||||||||||||||| |||| | ||||||||| |||| ||||    
T  11596297 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca 11596345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 15029824 - 15029788
Alignment:
Q  73 cgactccaacacatataattaccctgaattatgtgat 109  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgat 15029788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 18966628 - 18966568
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtcc 62  Q
    |||||||||||||||||||||  |||| | ||| ||||| |||| ||||| ||||||||||    
T  18966628 ctatgaagcacggacactccttagattaggcgtatcccgttgtcggacacgtgttgtgtcc 18966568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28964187 - 28964231
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtc 45  Q
    ||||||||||| |||||||||||||||| | |||||||| |||||    
T  28964187 actatgaagcatggacactcctcggattaggcgtgtcccagtgtc 28964231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 29205587 - 29205539
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagaca 50  Q
    |||||||||||| |||||||||||||| | |||||||| ||||| ||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggaca 29205539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 30103296 - 30103368
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||  ||||||||||||||| || |||||| | ||||||||| |||| ||||   ||||||||||    
T  30103296 actatgaagcagagacactcctcggattagatgtgtcctgatgtcagacatatgtcgtgtttgacaccgacac 30103368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 24339772 - 24339649
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||| ||||||||||||| | |||||||||||||| || || ||| |||||| ||||||||||||| || |||| | ||||||| ||||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 24339673  T
Q  102 tatgtgatttcctcagattattag 125  Q
    ||||||||||  ||| ||||||||    
T  24339672 tatgtgattttttcaaattattag 24339649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 32308249 - 32308119
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    ||||||||| | |||||||||||||| |  ||||| ||||||| ||||  ||| |||||||||||||||||||| |  ||||||| |||||| |||||||    
T  32308249 tatgaagcatgaacactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaatt 32308150  T
Q  103 atgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||| |||| |||||||| |||||||    
T  32308149 atgtgattttctcaaattattagcggtgtcg 32308119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 1433578 - 1433453
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| |||||||||  |||      |||||||||| || |||||||||||||| |  |||    
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgt------ccgacacgacaccgacacatataattacaccaaat 1433485  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
     ||||||||| |||| |||||||  |||||||    
T  1433484 gatgtgattttctcaaattattaacggtgtcg 1433453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 5409771 - 5409888
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||||||||||| | |||||||||||||| ||||| ||| ||||      |||||||||| || |||| | ||||| | ||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt------ccgacacgacaccgacacttgtaattgcactgaat 5409864  T
Q  102 tatgtgatttcctcagattattag 125  Q
    ||||||||||  ||| ||||||||    
T  5409865 tatgtgattttttcaaattattag 5409888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 15680928 - 15680857
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||| ||||| ||| |||||| ||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 15680857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 6630854 - 6630972
Alignment:
Q  15 acactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcct 114  Q
    ||||||||| |||| |  |||||  |||||| | ||| |||||||||| ||||| |||||||  | |||||||||||||| |||||||| |||| || ||    
T  6630854 acactcctcagattaggtgtgtcttggtgtcgggcacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttct 6630953  T
Q  115 cagattattagtggtgtcg 133  Q
    || ||||||||||||||||    
T  6630954 caaattattagtggtgtcg 6630972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 9778624 - 9778521
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||||| ||||| | |||||||||||||| ||||| ||||||||      |||||||||| || |||| | ||||||  ||||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgt------ccgacacgacaccgacacttgtaattatactgaat 9778531  T
Q  102 tatgtgattt 111  Q
    ||||||||||    
T  9778530 tatgtgattt 9778521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 11665370 - 11665499
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    ||||||||||||||| |||||| ||| || ||||  ||||||| ||||| ||| |||| | ||||||||| |||  | |||| ||||||||  |||||||    
T  11665370 tatgaagcacggacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaatt 11665469  T
Q  103 atgtgatttcctcagattattagtggtgtc 132  Q
    |||||||||  ||| ||||||||| |||||    
T  11665470 atgtgattttttcaaattattagttgtgtc 11665499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 22868093 - 22868041
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||| |||||||||||||||| |||| ||||||||||||||||    
T  22868093 acacatataattacactgaattatgtgattttctcatattattagtggtgtcg 22868041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 32287404 - 32287523
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    |||||||||||||||||||||||||| |  ||||||||||||| ||||| |||  ||||| ||||||           ||||||||| || | |||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccg-----------acacatatacttgcactgaatt 32287492  T
Q  103 atgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||| ||||||||||||| |||||||    
T  32287493 atgtgattttctcagattattagcggtgtcg 32287523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 598327 - 598256
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||||| |||||||| | |||||||||||||| ||||| ||| |||||  ||||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 598256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 21864927 - 21864856
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||| ||||| ||| |||||| ||| ||||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacac 21864856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 2334380 - 2334271
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    |||||||| ||||||||||||||||||| |||||||  | ||||| ||||  ||| |||||| ||| ||||||||| || |||| | ||||||| || ||    
T  2334380 actatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgaca-cgacacgacaccgacacttgtaattacactaaa 2334282  T
Q  101 ttatgtgattt 111  Q
    |||||||||||    
T  2334281 ttatgtgattt 2334271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 29787346 - 29787429
Alignment:
Q  48 acacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||  |||||||||||||||  || ||||||||||  ||||| |||||||||||||||| |||| |||||||| |||||||    
T  29787346 acacatgtcatgtccaacaccgacattacaccaacacata--attacactgaattatgtgattttctcaaattattagcggtgtcg 29787429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 26033392 - 26033513
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatta 103  Q
    ||||| ||||||||||||||||||| |  ||||| |||| || ||||| |||  ||||  ||||||||||||  || |||| | ||||||| ||||||||    
T  26033392 atgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaatta 26033491  T
Q  104 tgtgatttcctcagattattag 125  Q
    ||||||||  ||| ||||||||    
T  26033492 tgtgattttttcaaattattag 26033513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 21880271 - 21880200
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||||| |||||||| | ||||||| |||||| ||||  ||| |||||| ||||||||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacac 21880200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 24105797 - 24105726
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||  ||||||||||| || | |||||||||||||| ||||||||||||| || || |||||||    
T  24105797 ctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacac 24105726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 43027404 - 43027463
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtc 61  Q
    ||||||||||||||||||| ||||||| | |||||||||||||| ||||| ||| |||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 43027463  T

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Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6490836 - 6490786
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    ||||||||||||||||||||||||||||   |||||||||||||| |||||    
T  6490836 actatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 17307958 - 17307904
Alignment:
Q  67 ccgacacgactccaacacatataattaccctgaattatgtgatttcctcagatta 121  Q
    |||||||||| ||||||||||||||||| ||||||||||| |||| |||| ||||    
T  17307958 ccgacacgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25822786 - 25822685
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    |||||||| |||||||||||||  |||| | | ||||||| |||||||||| ||| |||||| | ||||| ||||| || |||| | ||||||| |||||    
T  25822786 actatgaaacacggacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaa 25822687  T
Q  101 tt 102  Q
    ||    
T  25822686 tt 25822685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 26329356 - 26329433
Alignment:
Q  47 gacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattatta 124  Q
    ||||| ||| |||||  ||||||||||||| || |||||||||||||| ||||||| |||| ||| |||| |||||||    
T  26329356 gacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattatta 26329433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 40131939 - 40131988
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||| |||||    
T  40131939 ctatgaagcacagacactcctcggattagacgtgtccctgtgtcggacac 40131988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 5835298 - 5835246
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||||||| ||||||||||| |||| |||| | ||||||||||||||    
T  5835298 acacatataattacactgaattatgttattttctcaaactattagtggtgtcg 5835246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 8160484 - 8160416
Alignment:
Q  64 acaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtc 132  Q
    ||||||||||||  ||||||||||||||||| || |||||||| |||| || | |||||||| ||||||    
T  8160484 acaccgacacgataccaacacatataattacactaaattatgtaattttcttaaattattagcggtgtc 8160416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 11831563 - 11831431
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 100  Q
    ||||||||||| | ||| | || ||||| | ||||  ||||||||| |||||||| |||||| ||||||| ||||| | || || | ||||||| || ||    
T  11831563 actatgaagcatgaacagttcttggattaggcgtgctccggtgtcaaacacatgtcgtgtccgacaccgatacgacacgaatacttgtaattacactaaa 11831464  T
Q  101 ttatgtgatttcctcagattattagtggtgtcg 133  Q
    |||| ||||||  ||| ||||||||| ||||||    
T  11831463 ttatatgattttttcaaattattagttgtgtcg 11831431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 13770810 - 13770750
Alignment:
Q  7 aagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacac 67  Q
    |||||||||||||| ||||||| | ||||| |||||||| ||||| |||||||||| ||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacac 13770750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 15902897 - 15902821
Alignment:
Q  57 gtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||| | |||||||| || || |||||||||||||| || |||||||||||||  ||| ||||||| ||||||||    
T  15902897 gtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcg 15902821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 20549909 - 20549790
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    |||||||||||| ||||||||||||| | |||||| |  |||| ||||  |||||||||| ||||||           |||||||||||||| |||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccg-----------acacatataattacactgaatt 20549821  T
Q  103 atgtgatttcctcagattattagtggtgtcg 133  Q
    | ||||||| |||| |||||||| |||||||    
T  20549820 acgtgattttctcaaattattagcggtgtcg 20549790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 21140978 - 21141042
Alignment:
Q  69 gacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||||| |||| |||||| || ||||||||| |||||| || | ||||||||||||||||    
T  21140978 gacacgactccgacacctataatcacactgaattatatgattttcttaaattattagtggtgtcg 21141042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 22602705 - 22602753
Alignment:
Q  68 cgacacgactccaacacatataattaccctgaattatgtgatttcctca 116  Q
    ||||||||| || |||||||||||||| |||||||||||||||| ||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgattttctca 22602753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 27945104 - 27945040
Alignment:
Q  69 gacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||| || |||| | ||||||| ||||||||||| |||| |||| ||||||||||||||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcg 27945040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 32093953 - 32094058
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgt-cccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctga 99  Q
    ||||||||||||| |||||||||||||| | ||||| ||||||||| ||||| ||| ||||      |||||||||| || |||  | ||||||| ||||    
T  32093953 actatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgt------ccgacacgacaccgacatttgtaattacactga 32094046  T
Q  100 attatgtgattt 111  Q
    ||||||||||||    
T  32094047 attatgtgattt 32094058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 4795018 - 4794915
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    |||||||||| |||||| || ||||| |||||||   ||||||||| || ||| |||||| ||||||| |||   || |||| ||||||||| |||||||    
T  4795018 tatgaagcacagacacttcttggattagacgtgtttaggtgtcagatacgtgtcgtgtccgacaccgatacggtaccgacacttataattacactgaatt 4794919  T
Q  103 atgt 106  Q
    ||||    
T  4794918 atgt 4794915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 18035806 - 18035852
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagaca 50  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||    
T  18035806 tatgaagcacggacactcctcggattagacgtgttcc-gtgtcagaca 18035852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 5548741 - 5548675
Alignment:
Q  67 ccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||||| |  |||||||||||||| ||||||||| |||||| |||| ||||| || |||||||    
T  5548741 ccgacacgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcg 5548675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 29763129 - 29763187
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgt 60  Q
    ||||||||||||||||||||||||||| | ||||||| | |||| ||||| ||| ||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 33384576 - 33384642
Alignment:
Q  67 ccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||| || ||||||||||||||||| || ||||||  ||||| ||||||||||||  |||||||    
T  33384576 ccgacaccacaccaacacatataattacactaaattataggattttctcagattattaacggtgtcg 33384642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 35297669 - 35297723
Alignment:
Q  70 acacgactccaacacatataattaccctgaattatgtgatttcctcagattatta 124  Q
    ||||||| ||||||||||||||||   ||||||||||||||| |||| |||||||    
T  35297669 acacgacaccaacacatataattataatgaattatgtgattttctcaaattatta 35297723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 38134335 - 38134457
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||  |||||||||||||| | ||||||||| ||||  | || | | | |||||||||| ||| ||  || |||||||| |||||  |||||    
T  38134335 ctatgaagcacatacactcctcggattaggcgtgtcccgatgtcgaatacttatcgagtccaacacccacatgagaccgacacatatgattacattgaat 38134434  T
Q  102 tatgtgatttcctcagattatta 124  Q
    ||||| |||| |||| |||||||    
T  38134435 tatgtcattttctcaaattatta 38134457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 7328686 - 7328743
Alignment:
Q  68 cgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    ||||||||| || |||||||||||||| || |||||||| |||| |||| ||||||||    
T  7328686 cgacacgacaccgacacatataattacactaaattatgttattttctcaaattattag 7328743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 14729822 - 14729773
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    |||||||| ||||||||||||||||||   |||||||||||||| |||||    
T  14729822 ctatgaagtacggacactcctcggattaagcgtgtcccggtgtcggacac 14729773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 16341561 - 16341504
Alignment:
Q  67 ccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattatta 124  Q
    |||||||||| ||  ||||||||||||| || ||||||||||||| |||| |||||||    
T  16341561 ccgacacgacaccggcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 19206118 - 19206049
Alignment:
Q  64 acaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||| ||| ||| || |||||||||||||   ||||||||||||||| |||| |||||||| |||||||    
T  19206118 acaccaacaagacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcg 19206049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40287301 - 40287350
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcagaca 50  Q
    |||| ||||||||||||||||||||||| | | |||||||||||| ||||    
T  40287301 actacgaagcacggacactcctcggattaggcatgtcccggtgtcggaca 40287350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 8842282 - 8842322
Alignment:
Q  5 tgaagcacggacactcctcggatttgacgtgtcccggtgtc 45  Q
    |||||||||||||||||| ||||| | ||||||||||||||    
T  8842282 tgaagcacggacactccttggattaggcgtgtcccggtgtc 8842322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 11722073 - 11722117
Alignment:
Q  7 aagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    ||||||||||||||||||||||  ||||||||| ||||| |||||    
T  11722073 aagcacggacactcctcggattcaacgtgtccctgtgtcggacac 11722117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 17851482 - 17851438
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    |||||||||||||| |||||||||||||||| || | ||||||||    
T  17851482 acacatataattacactgaattatgtgattttctaaaattattag 17851438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 18035872 - 18035924
Alignment:
Q  81 acacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||| ||||||| ||||||||||||||||||| | ||||| || |||||||    
T  18035872 acacatgtaattacgctgaattatgtgatttcctaaaattatcagcggtgtcg 18035924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 18039068 - 18039020
Alignment:
Q  63 aacaccgacacgactccaacacatataattaccctgaattatgtgattt 111  Q
    |||||||||||||| || |||| | ||||||| ||||||||||||||||    
T  18039068 aacaccgacacgacaccgacacttgtaattacactgaattatgtgattt 18039020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 22868164 - 22868108
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgt 60  Q
    |||||||| ||||||||||||||||    ||||||||||||| ||||| ||||||||    
T  22868164 atgaagcatggacactcctcggattatgtgtgtcccggtgtctgacacgtgttgtgt 22868108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 35862070 - 35862034
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcc 38  Q
    ||||||||||||||||||||||||||| | |||||||    
T  35862070 ctatgaagcacggacactcctcggattaggcgtgtcc 35862034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 132
Target Start/End: Original strand, 44454 - 44584
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||| |||||| ||| ||||   | |||||| ||||| ||||| |||||||||||||||||||||||  || |||||||||||||| ||||||    
T  44454 ctatgaagcacagacacttctcagattaaccatgtcccagtgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaat 44553  T
Q  102 tatgtgatttcctcagattattagtggtgtc 132  Q
    |||||||||| |||| ||| |||| ||||||    
T  44554 tatgtgattttctcaaatttttagcggtgtc 44584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 71855 - 71746
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||| ||||||||||||||| | |||||||||||||| ||||| |||||||||| ||||||||||||| |  ||||   ||||||| ||||||    
T  71855 ctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaat 71756  T
Q  102 tatgtgattt 111  Q
    | ||||||||    
T  71755 tgtgtgattt 71746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 71713 - 71677
Alignment:
Q  128 gtgtcgtgtctgatgtctgtatccgtgcttcatagat 164  Q
    |||||||||| |||||| |||||||||||||||||||    
T  71713 gtgtcgtgtccgatgtccgtatccgtgcttcatagat 71677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 241724 - 241615
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||||||||| |||||||| | |||||||||||||| ||||| ||| |||||| ||||| ||||||| || ||||  |||||||| || |||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaat 241625  T
Q  102 tatgtgattt 111  Q
    ||||||||||    
T  241624 tatgtgattt 241615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 236914 - 236963
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacac 51  Q
    ||||||||||| |||||||||| |||| |  |||||||||||||||||||    
T  236914 ctatgaagcacagacactcctcagattaggtgtgtcccggtgtcagacac 236963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 123
Target Start/End: Complemental strand, 53303 - 53189
Alignment:
Q  9 gcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtga 108  Q
    ||||||||||| || |||||  ||||||||||||||| ||||| |||  ||||| ||||||||||| | || |||| ||||||||| |||||||||||||    
T  53303 gcacggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtga 53204  T
Q  109 tttcctcagattatt 123  Q
    ||| |||| ||||||    
T  53203 ttttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 3778 - 3887
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||| |||||||||||||||| | |||||| || |||| ||||  ||| |||||| ||||| ||||||| |  |||| | ||||||| ||||||    
T  3778 ctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaat 3877  T
Q  102 tatgtgattt 111  Q
    ||||||||||    
T  3878 tatgtgattt 3887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 263303 - 263424
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatta 103  Q
    ||||| ||||||||||||||||||| | ||||||  ||| ||  |||| ||| |||||  ||||||||||||| |  |||| ||||||||| ||||||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaatta 263402  T
Q  104 tgtgatttcctcagattattag 125  Q
    |||| ||| |||| ||||||||    
T  263403 tgtggttttctcaaattattag 263424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 5926 - 6034
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatt 102  Q
    ||||| |||||||||||||| ||||  | |||||| | ||||||||||| ||| |||| | ||||||| ||||| || |||||||||||||| ||| |||    
T  5926 tatgaggcacggacactccttggataaggcgtgtctctgtgtcagacacgtgtcgtgttcgacaccgatacgacaccgacacatataattacactgcatt 6025  T
Q  103 atgtgattt 111  Q
     ||||||||    
T  6026 ttgtgattt 6034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 1165 - 1034
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||| |||||||| ||| |   ||||  | ||||| |||||  ||||||||||||||||||||| || |  ||||||||| |||| ||||||    
T  1165 ctatgaagcacgtacactccttggactatccgtgctctggtgttagacatttgttgtgtccaacaccgacaccacactgacacatatagttacactgaat 1066  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||| ||||  ||| |||||||| |||||||    
T  1065 tatgtaattttttcaaattattagcggtgtcg 1034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 403 - 473
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||||||||||||||| |  ||||||||||||| |||||  || |||||| ||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 92940 - 92772
Alignment:
Q  3 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaa----caccgacacgactccaacacatataattaccctg 98  Q
    |||||||||||||||||||||||||| | ||||||| |||||| ||||  ||| |||||| |    |||| |||| |  |  |||| | ||||||| |||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacccaccaacacaaaactgacacttgtaattacactg 92841  T
Q  99 aattatgtgatttcctcagattattagtggtgt---cgtgtctgatgtctgtatccgtgcttcatagatg 165  Q
    |||||||| |||| |||| |||||||| |||||   |||||| | |||| ||||||||||||||||||||    
T  92840 aattatgtaattttctcaaattattagcggtgtcggcgtgtcag-tgtccgtatccgtgcttcatagatg 92772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 164
Target Start/End: Original strand, 7314 - 7405
Alignment:
Q  76 ctccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgt---cgtgtctgatgtctgtatccgtgcttcatagat 164  Q
    ||||||||| ||||||||| || |||||||||||||   || ||||||||| ||||   |||||| | ||||||||||||||||||||||||    
T  7314 ctccaacacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgtccggtgtctgtatccgtgcttcatagat 7405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 8564 - 8695
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||||||||||||||||||||| ||| | ||||| || ||||| ||||| | | |||||| | ||||||||||| || |||  | ||||||  | ||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacgacaccgacatttgtaattataccgaat 8663  T
Q  102 tatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||| |  ||| ||||||||| ||||||    
T  8664 tatgtgatattttcaaattattagttgtgtcg 8695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 8917 - 8846
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacac 73  Q
    |||||||||||||| ||||||| |||| | |||||| ||||||| ||||| ||| |||||| ||||||||||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 8846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 17542 - 17616
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgac 76  Q
    |||||||||||||| ||||  | |||| | |||||||||||||| |||| || ||||||| ||||||||||||||    
T  17542 ctatgaagcacggaaactcagctgattaggcgtgtcccggtgtcggacatatattgtgtctaacaccgacacgac 17616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 8720 - 8647
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacga 75  Q
    ||||||||||||||||||||| ||||| | ||| |||| ||||| ||||| ||| |||| |||||| |||||||    
T  8720 ctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgttcaacacagacacga 8647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 13523 - 13399
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatta 103  Q
    ||||||||||||||||||| ||||| |  ||||||  ||||||||| | ||| |||||| |||||||||     || || | | ||||| | ||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgaca-----ccgacccttgtaattgcactgaatta 13429  T
Q  104 tgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||| |||| ||||||||| ||||||    
T  13428 tgtgattttctcaaattattagttgtgtcg 13399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 23641 - 23532
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    |||||||||||  ||||| || |||||   |||||||| || || ||||||| | |||||| ||||||| ||||| |  |||| ||||||||| ||||||    
T  23641 ctatgaagcacaaacacttctgggattatgcgtgtcccagtctcggacacatatcgtgtccgacaccgaaacgacactgacacttataattacactgaat 23542  T
Q  102 tatgtgattt 111  Q
    ||||||||||    
T  23541 tatgtgattt 23532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 23485 - 23441
Alignment:
Q  67 ccgacacgactccaacacatataattaccctgaattatgtgattt 111  Q
    |||||||||| || |||| ||||||||| ||||||||||||||||    
T  23485 ccgacacgacaccgacacttataattacactgaattatgtgattt 23441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 21804 - 21928
Alignment:
Q  4 atgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatta 103  Q
    ||||||||||||||||||| ||||| |  ||||||  ||||||||| | ||| |||||| |||||||||     || || | | ||||| | ||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgaca-----ccgacccttgtaattgcactgaatta 21898  T
Q  104 tgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||| |||| ||||||||| ||||||    
T  21899 tgtgattttctcaaattattagttgtgtcg 21928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 3058 - 2949
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 101  Q
    ||||| ||||||||||||||||||||| | ||||| ||||||||  |||| ||| |||||  | ||||||||||| |  | || | ||||||| || |||    
T  3058 ctatggagcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaat 2959  T
Q  102 tatgtgattt 111  Q
    ||||||||||    
T  2958 tatgtgattt 2949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 24155 - 24080
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacaca--tgttgtgtccaacaccgacacgac 76  Q
    ||||||||||||||||||| ||||||| | ||||| || ||||| ||||||  |||||||||| |||||||||||||    
T  24155 ctatgaagcacggacactcatcggattaggcgtgt-ccagtgtcggacacacgtgttgtgtccgacaccgacacgac 24080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 4821 - 4869
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagaca 50  Q
    ||||||||||||||||||||||||||| | |||||||| ||||| ||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 4869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 135308 - 135364
Alignment:
Q  69 gacacgactccaacacatataattaccctgaattatgtgatttcctcagattattag 125  Q
    |||||||| || |||||||||||||| | |||||||||||||| |||| ||||||||    
T  135308 gacacgacaccgacacatataattacacagaattatgtgattttctcaaattattag 135364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 3427 - 3384
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtc 45  Q
    ||||||||||||||||||||||||||| | |||||||| |||||    
T  3427 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtc 3384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 14574 - 14498
Alignment:
Q  88 taattaccctgaattatgtgatttcctcagattattagtggtgt---cgtgtctgatgtctgtatccgtgcttcata 161  Q
    ||||||| ||||||||||||||||  ||| ||||||||| ||||   |||||| | |||| ||||||||||||||||    
T  14574 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtccggtgtccgtatccgtgcttcata 14498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 13543 - 13453
Alignment:
Q  2 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataatt 92  Q
    |||||||| |||||||||||||||||| |  || ||||| ||||  | || ||| |||||| ||||||||||||| || |||||| |||||    
T  13543 ctatgaagtacggacactcctcggattaggtgtatcccgatgtcgtatacgtgtcgtgtccgacaccgacacgaccccgacacatgtaatt 13453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 17840 - 17901
Alignment:
Q  33 gtgtcccggtgtcagacacatgttgtgtccaacaccgacacgactccaacacatataattac 94  Q
    ||||||| ||||| ||||| ||| |||||||||||||| ||||| ||  |||||||||||||    
T  17840 gtgtcccagtgtcggacacgtgtcgtgtccaacaccgatacgacaccgtcacatataattac 17901  T

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Target: scaffold0085 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 26428 - 26392
Alignment:
Q  97 tgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  26428 tgaattatgtgattttctcaaattattagtggtgtcg 26392  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 46777 - 46741
Alignment:
Q  1 actatgaagcacggacactcctcggatttgacgtgtc 37  Q
    |||||||||||||||||||||||||||| | ||||||    
T  46777 actatgaagcacggacactcctcggattaggcgtgtc 46741  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 99956 - 99892
Alignment:
Q  69 gacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtgtcg 133  Q
    |||||||| |||||||||||||||||  |||||||||| |||| || | |||||||  |||||||    
T  99956 gacacgacaccaacacatataattacattgaattatgttattttctaaaattattatcggtgtcg 99892  T

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