View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14494_low_1 (Length: 823)

Name: NF14494_low_1
Description: NF14494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14494_low_1
NF14494_low_1
[»] chr1 (56 HSPs)
chr1 (301-564)||(23251825-23252088)
chr1 (312-564)||(45619630-45619882)
chr1 (20-217)||(23238224-23238420)
chr1 (301-564)||(28413159-28413422)
chr1 (301-531)||(5357266-5357496)
chr1 (301-561)||(38672266-38672526)
chr1 (572-747)||(23252129-23252304)
chr1 (571-749)||(11912533-11912710)
chr1 (301-560)||(2824311-2824569)
chr1 (301-561)||(39806530-39806790)
chr1 (313-561)||(13432334-13432583)
chr1 (571-736)||(31073123-31073288)
chr1 (582-811)||(44917185-44917413)
chr1 (576-724)||(9869884-9870032)
chr1 (581-772)||(32798516-32798706)
chr1 (580-724)||(28996799-28996942)
chr1 (579-753)||(1115250-1115424)
chr1 (583-724)||(35085796-35085937)
chr1 (580-724)||(1175386-1175529)
chr1 (580-724)||(29002515-29002658)
chr1 (580-724)||(26622253-26622396)
chr1 (612-724)||(43687455-43687567)
chr1 (580-736)||(45023327-45023482)
chr1 (580-683)||(39052633-39052736)
chr1 (580-683)||(39059005-39059108)
chr1 (329-425)||(1115606-1115703)
chr1 (301-410)||(30660313-30660422)
chr1 (301-410)||(31473732-31473841)
chr1 (302-425)||(13249190-13249312)
chr1 (582-629)||(44917122-44917169)
chr1 (580-683)||(45016585-45016688)
chr1 (349-425)||(1175127-1175204)
chr1 (349-425)||(4600050-4600127)
chr1 (349-425)||(28996530-28996607)
chr1 (349-425)||(29002246-29002323)
chr1 (329-425)||(32798225-32798322)
chr1 (583-724)||(44242151-44242292)
chr1 (349-425)||(45023056-45023133)
chr1 (612-724)||(4600352-4600464)
chr1 (580-724)||(41304816-41304959)
chr1 (580-683)||(6239448-6239551)
chr1 (580-683)||(42092700-42092803)
chr1 (349-425)||(26621991-26622069)
chr1 (349-410)||(31072839-31072901)
chr1 (301-425)||(44241830-44241953)
chr1 (349-425)||(9869626-9869703)
chr1 (376-424)||(44916887-44916935)
chr1 (349-410)||(41305158-41305221)
chr1 (774-808)||(23252310-23252344)
chr1 (755-808)||(11912364-11912417)
chr1 (329-425)||(11912886-11912983)
chr1 (376-425)||(23761960-23762009)
chr1 (349-425)||(35085527-35085604)
chr1 (376-425)||(39052962-39053011)
chr1 (376-425)||(39059334-39059383)
chr1 (376-425)||(45016330-45016379)
[»] chr2 (37 HSPs)
chr2 (301-557)||(36842261-36842517)
chr2 (301-515)||(41456079-41456293)
chr2 (301-560)||(17863956-17864215)
chr2 (301-560)||(37439024-37439283)
chr2 (580-724)||(21341225-21341369)
chr2 (580-724)||(16816623-16816766)
chr2 (580-724)||(16855780-16855923)
chr2 (580-722)||(21067215-21067357)
chr2 (580-736)||(36781457-36781612)
chr2 (580-683)||(2158415-2158518)
chr2 (580-683)||(2164831-2164934)
chr2 (580-683)||(34834127-34834230)
chr2 (580-683)||(34840571-34840674)
chr2 (580-683)||(45012787-45012890)
chr2 (580-730)||(15853342-15853491)
chr2 (349-425)||(2021072-2021149)
chr2 (349-425)||(15853071-15853148)
chr2 (301-451)||(24852629-24852776)
chr2 (349-425)||(29485416-29485493)
chr2 (580-736)||(42930655-42930809)
chr2 (349-425)||(42930996-42931073)
chr2 (349-425)||(45012504-45012581)
chr2 (580-724)||(2020733-2020876)
chr2 (580-683)||(12951602-12951705)
chr2 (675-724)||(11909264-11909313)
chr2 (349-425)||(21331618-21331695)
chr2 (349-425)||(21341550-21341627)
chr2 (301-425)||(13163291-13163414)
chr2 (349-425)||(43268380-43268458)
chr2 (376-425)||(2158161-2158210)
chr2 (376-425)||(2164577-2164626)
chr2 (376-425)||(12951345-12951394)
chr2 (376-425)||(13901579-13901628)
chr2 (376-425)||(16816954-16817003)
chr2 (376-425)||(16856111-16856160)
chr2 (301-425)||(34744914-34745039)
chr2 (376-425)||(36781808-36781857)
[»] chr8 (27 HSPs)
chr8 (301-564)||(14394171-14394434)
chr8 (301-560)||(7933416-7933675)
chr8 (301-564)||(24219758-24220021)
chr8 (571-736)||(45067699-45067864)
chr8 (301-425)||(29336687-29336811)
chr8 (632-747)||(12769742-12769857)
chr8 (612-724)||(16709956-16710068)
chr8 (571-736)||(1238996-1239161)
chr8 (603-724)||(15013205-15013326)
chr8 (580-683)||(6463891-6463994)
chr8 (580-683)||(7312151-7312254)
chr8 (580-683)||(36004799-36004902)
chr8 (349-425)||(36425354-36425431)
chr8 (580-683)||(8012635-8012738)
chr8 (349-410)||(11357832-11357894)
chr8 (329-425)||(15012889-15012986)
chr8 (349-425)||(26250216-26250293)
chr8 (580-683)||(36076769-36076872)
chr8 (349-409)||(1238735-1238797)
chr8 (349-410)||(45068055-45068117)
chr8 (376-425)||(6464200-6464249)
chr8 (376-425)||(7311898-7311947)
chr8 (376-425)||(8012944-8012993)
chr8 (376-425)||(16710291-16710340)
chr8 (376-425)||(36005106-36005155)
chr8 (376-425)||(36021422-36021471)
chr8 (376-425)||(36076516-36076565)
[»] chr5 (37 HSPs)
chr5 (301-560)||(3412780-3413039)
chr5 (301-564)||(12918436-12918699)
chr5 (301-515)||(9843822-9844036)
chr5 (301-515)||(2155656-2155869)
chr5 (301-558)||(19853020-19853277)
chr5 (582-749)||(2439580-2439747)
chr5 (313-559)||(30579680-30579927)
chr5 (571-725)||(12505063-12505216)
chr5 (301-437)||(34738612-34738748)
chr5 (301-497)||(42747558-42747754)
chr5 (635-724)||(30579505-30579594)
chr5 (580-724)||(29413954-29414097)
chr5 (585-724)||(5877015-5877153)
chr5 (580-683)||(34356580-34356683)
chr5 (603-749)||(2823072-2823218)
chr5 (583-724)||(22360758-22360898)
chr5 (580-683)||(34358371-34358474)
chr5 (349-425)||(2958380-2958457)
chr5 (349-425)||(2966849-2966926)
chr5 (349-425)||(4974084-4974161)
chr5 (571-724)||(4974349-4974502)
chr5 (349-425)||(25894273-25894350)
chr5 (580-724)||(22314621-22314764)
chr5 (580-683)||(2958664-2958767)
chr5 (580-683)||(2967133-2967236)
chr5 (580-683)||(29974763-29974866)
chr5 (580-683)||(29981266-29981369)
chr5 (580-683)||(30021776-30021879)
chr5 (349-410)||(40958256-40958318)
chr5 (329-425)||(12505389-12505486)
chr5 (349-425)||(42151340-42151417)
chr5 (776-808)||(2439873-2439905)
chr5 (584-724)||(42151615-42151754)
chr5 (349-425)||(29414292-29414370)
chr5 (376-425)||(29981008-29981057)
chr5 (376-425)||(34356912-34356961)
chr5 (376-425)||(34358703-34358752)
[»] chr3 (34 HSPs)
chr3 (301-560)||(4591268-4591527)
chr3 (312-515)||(20949724-20949928)
chr3 (301-564)||(4643948-4644211)
chr3 (582-749)||(43932358-43932525)
chr3 (571-749)||(10940575-10940753)
chr3 (301-482)||(25692453-25692635)
chr3 (580-725)||(43995855-43996000)
chr3 (580-749)||(47441617-47441786)
chr3 (303-437)||(17735818-17735952)
chr3 (303-437)||(19037087-19037221)
chr3 (328-445)||(24705310-24705432)
chr3 (599-723)||(20650357-20650481)
chr3 (570-724)||(2786492-2786645)
chr3 (580-683)||(27501282-27501385)
chr3 (348-425)||(461055-461131)
chr3 (580-725)||(32747161-32747305)
chr3 (580-724)||(4310754-4310897)
chr3 (580-724)||(23069281-23069425)
chr3 (349-425)||(25893747-25893824)
chr3 (580-725)||(25894019-25894163)
chr3 (349-425)||(27501591-27501668)
chr3 (349-425)||(4311110-4311187)
chr3 (349-425)||(6036787-6036864)
chr3 (349-425)||(10940928-10941005)
chr3 (302-410)||(20650764-20650873)
chr3 (349-425)||(24179595-24179672)
chr3 (349-425)||(32746891-32746968)
chr3 (349-425)||(43932098-43932175)
chr3 (580-683)||(9569848-9569951)
chr3 (376-425)||(9570171-9570220)
chr3 (376-425)||(9576673-9576722)
chr3 (349-425)||(23068985-23069062)
chr3 (376-425)||(43995625-43995674)
chr3 (376-425)||(47441350-47441399)
[»] chr7 (46 HSPs)
chr7 (301-509)||(21900730-21900937)
chr7 (301-515)||(10830660-10830874)
chr7 (301-515)||(11024452-11024666)
chr7 (301-451)||(8881011-8881161)
chr7 (580-724)||(19090587-19090730)
chr7 (632-768)||(33849882-33850018)
chr7 (571-724)||(15915410-15915562)
chr7 (571-724)||(22853502-22853654)
chr7 (580-724)||(15949940-15950083)
chr7 (580-683)||(1379751-1379854)
chr7 (580-683)||(2447452-2447555)
chr7 (580-683)||(5049227-5049330)
chr7 (580-683)||(6796242-6796345)
chr7 (580-683)||(48346409-48346512)
chr7 (580-683)||(48352793-48352896)
chr7 (349-425)||(6020488-6020565)
chr7 (349-425)||(8185016-8185093)
chr7 (349-425)||(8192576-8192653)
chr7 (329-425)||(14288216-14288313)
chr7 (349-425)||(22853830-22853907)
chr7 (349-425)||(23612910-23612987)
chr7 (349-425)||(26602433-26602510)
chr7 (329-425)||(33850267-33850364)
chr7 (571-724)||(39433681-39433833)
chr7 (349-425)||(48353104-48353181)
chr7 (580-736)||(9642190-9642345)
chr7 (580-683)||(8141775-8141878)
chr7 (349-410)||(1948272-1948334)
chr7 (571-724)||(37026499-37026652)
chr7 (571-629)||(45434359-45434417)
chr7 (349-410)||(48346735-48346797)
chr7 (329-425)||(9642540-9642637)
chr7 (329-425)||(14299401-14299498)
chr7 (349-425)||(15915158-15915235)
chr7 (349-425)||(15949679-15949756)
chr7 (349-425)||(21643039-21643116)
chr7 (580-683)||(3923422-3923525)
chr7 (349-425)||(19090329-19090407)
chr7 (376-425)||(1379496-1379545)
chr7 (376-425)||(2447195-2447244)
chr7 (349-425)||(3923717-3923794)
chr7 (376-425)||(5049536-5049585)
chr7 (376-425)||(6795987-6796036)
chr7 (376-425)||(8142068-8142117)
chr7 (349-425)||(36876066-36876143)
chr7 (349-425)||(39433428-39433505)
[»] chr6 (33 HSPs)
chr6 (301-555)||(10081058-10081311)
chr6 (313-562)||(9847006-9847256)
chr6 (312-482)||(11016572-11016742)
chr6 (609-725)||(1166774-1166890)
chr6 (580-724)||(9864047-9864191)
chr6 (571-683)||(7061830-7061942)
chr6 (571-683)||(7069016-7069128)
chr6 (301-425)||(22870713-22870837)
chr6 (580-683)||(31128614-31128717)
chr6 (583-724)||(13671100-13671241)
chr6 (580-683)||(1427738-1427841)
chr6 (580-683)||(4019550-4019653)
chr6 (580-683)||(4025976-4026079)
chr6 (580-683)||(4717855-4717958)
chr6 (349-425)||(4019859-4019936)
chr6 (349-425)||(4026285-4026362)
chr6 (349-425)||(7062140-7062217)
chr6 (349-425)||(7069326-7069403)
chr6 (571-724)||(27670825-27670977)
chr6 (349-425)||(34655772-34655849)
chr6 (580-736)||(4187489-4187644)
chr6 (351-425)||(31548418-31548493)
chr6 (580-683)||(34649604-34649707)
chr6 (580-683)||(34656055-34656158)
chr6 (349-425)||(9864384-9864461)
chr6 (571-724)||(21261858-21262011)
chr6 (329-425)||(29907360-29907457)
chr6 (349-425)||(34649321-34649398)
chr6 (349-410)||(21262212-21262275)
chr6 (349-410)||(27670615-27670677)
chr6 (376-425)||(1428047-1428096)
chr6 (376-425)||(4718164-4718213)
chr6 (376-425)||(31128914-31128963)
[»] chr4 (26 HSPs)
chr4 (301-561)||(13003295-13003556)
chr4 (582-811)||(36754005-36754233)
chr4 (603-725)||(5659817-5659939)
chr4 (301-482)||(52182735-52182917)
chr4 (603-715)||(30210841-30210953)
chr4 (580-736)||(8104673-8104828)
chr4 (580-736)||(13594900-13595055)
chr4 (580-724)||(37355621-37355765)
chr4 (580-730)||(55462053-55462202)
chr4 (301-410)||(49358955-49359063)
chr4 (580-683)||(41373790-41373893)
chr4 (349-425)||(8104402-8104479)
chr4 (349-425)||(13594629-13594706)
chr4 (583-724)||(16406140-16406281)
chr4 (349-425)||(17457376-17457453)
chr4 (349-425)||(27590826-27590903)
chr4 (349-425)||(30238750-30238827)
chr4 (349-425)||(37355973-37356050)
chr4 (349-425)||(37367939-37368016)
chr4 (585-696)||(7781122-7781233)
chr4 (349-425)||(7780847-7780925)
chr4 (301-425)||(5660173-5660298)
chr4 (349-425)||(16405867-16405944)
chr4 (349-425)||(55462396-55462473)
chr4 (349-410)||(30211175-30211237)
chr4 (376-425)||(41373536-41373585)
[»] scaffold0060 (1 HSPs)
scaffold0060 (581-811)||(15952-16182)
[»] scaffold0053 (3 HSPs)
scaffold0053 (580-724)||(71230-71373)
scaffold0053 (580-683)||(50494-50597)
scaffold0053 (376-425)||(50239-50288)
[»] scaffold0043 (2 HSPs)
scaffold0043 (580-683)||(4320-4423)
scaffold0043 (376-425)||(4629-4678)
[»] scaffold0510 (2 HSPs)
scaffold0510 (580-724)||(8177-8320)
scaffold0510 (376-425)||(8504-8553)
[»] scaffold0343 (1 HSPs)
scaffold0343 (349-425)||(3166-3243)
[»] scaffold0513 (1 HSPs)
scaffold0513 (349-410)||(11771-11834)


Alignment Details
Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 301 - 564
Target Start/End: Original strand, 23251825 - 23252088
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  23251825 gcaagaataacttcaatatcatgtaaattactagaatcatataatacaagatcaaaagattacattctaagctcaaacaagtacctctaatcccaactaa 23251924  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||     
T  23251925 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaagaacttgatttctccaagaaacttgatgaatc 23252024  T
Q  501 ctcactcaaacactagtgctctatgaaaacagaagaatttcgccctattctctctctaaaaatg 564  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23252025 ctcactcaaacactagtgctctatgaaaacagaagaatttcgccctattctctctctaaaaatg 23252088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 312 - 564
Target Start/End: Complemental strand, 45619882 - 45619630
Alignment:
Q  312 ttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaaggagatttagt 411  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| | || |||||| ||||||||| |||||||||||||||||    
T  45619882 ttcaatatcatgtaaattgctagaatcatatattacaagatcaaaagattacattctaagtttaaacaagtacctctaatccaaactaaggagatttagt 45619783  T
Q  412 tcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaattctcactcaaac 511  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||| || || || ||||||| | |||||||||    
T  45619782 tcatcattgtcatgtgaacattacaaaagtggaaggaaggttgagaatccatgtcaagaacttgatttctcaaataatctcgatgaatccacactcaaac 45619683  T
Q  512 actagtgctctatgaaaacagaagaatttcgccctattctctctctaaaaatg 564  Q
    ||   ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  45619682 acccttgctctatgaaaacagaagaatttcgccctattgtctatctaaaaatg 45619630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 160; E-Value: 8e-85
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 23238224 - 23238420
Alignment:
Q  20 gcccttgctaaaaatggtcaaggccttgcttgtaactcttttcaatggtggcctgcannnnnnnacttttattcttcatcttttgtattctgatagctta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||    
T  23238224 gcccttgctaaaaatggtcaaggccttgcttgtaactcttttcaatggtggcctgcacccccc-acttttattcttcatcttttgtattctgatagctta 23238322  T
Q  120 ggagttgctttttcttgactttatgacttgattgtattctggttcaggccttatcctgcttttatattagtgtttgttcacacacacataaacaagta 217  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23238323 ggagttgctttttcttgacgttatgacttgattgtattctggttcgggccttatcctgcttttatatcagtgtttgttcacacacacataaacaagta 23238420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 160; E-Value: 8e-85
Query Start/End: Original strand, 301 - 564
Target Start/End: Complemental strand, 28413422 - 28413159
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| ||||||||||||||| || ||||||||||||| |||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  28413422 gcaagaataacttcaatatcatgtaaattactagaatcatatattacaagattaaaagattacattctaatctcaatcaagtacctctaatcccaactaa 28413323  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| || ||||||||||     
T  28413322 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 28413223  T
Q  501 ctcactcaaacactagtgctctatgaaaacagaagaatttcgccctattctctctctaaaaatg 564  Q
    | ||||||| ||||| ||| |  |  ||||||   | |||| ||||||||||||||||||||||    
T  28413222 cgcactcaatcactattgcccagtataaacagtgtattttctccctattctctctctaaaaatg 28413159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 301 - 531
Target Start/End: Complemental strand, 5357496 - 5357266
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| ||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||| || |||||| |||||| |||||||||    
T  5357496 gcaagaataacttcaatatcatgtaaattgctagaatcatatattacaagatcaaaggattacattctaagcttaaacaagtacctctaaccccaactaa 5357397  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||| || || |||||||||||    
T  5357396 ggagaattagttcatcattgtcatgtgaacattacagaagtggaaggaaagttgagaattcatgccaagaacttgatttctcaaagaatcttgatgaatt 5357297  T
Q  501 ctcactcaaacactagtgctctatgaaaaca 531  Q
      ||||||||||||  |||||||| ||||||    
T  5357296 aacactcaaacactcttgctctatcaaaaca 5357266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 301 - 561
Target Start/End: Complemental strand, 38672526 - 38672266
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| ||||||||||||||| |||||||||||||||| || ||||| |||||||||||||||||||||||||||||| |||||||| |||||||    
T  38672526 gcaagaataacttcaatatcatgtaaattgctagaatcatatattataagattaaaagattacattctaagctcaatcaagtacctctaatctcaactaa 38672427  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||  |  |||||||||||||||| || ||||||||||     
T  38672426 ggagatttagttcatcattgtcatgagaactttacaaaagtggaaggaaagttgagaatccatgaaaggaacttgatttctccaagaatcttgatgaatc 38672327  T
Q  501 ctcactcaaacactagtgctctatgaaaacagaagaatttcgccctattctctctctaaaa 561  Q
    | ||||||| || || ||| | ||| ||||||   | ||| ||||||||||||||||||||    
T  38672326 cacactcaatcattattgcccaatgtaaacagggtatttttgccctattctctctctaaaa 38672266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 572 - 747
Target Start/End: Original strand, 23252129 - 23252304
Alignment:
Q  572 tgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtt 671  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  23252129 tgattaaatgggctatttatagaattcttgttctgcctcaactcgtctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaattt 23252228  T
Q  672 tgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcccttgggagttg 747  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||    
T  23252229 tgagccacgtcacctctaaggagtttaggccgccctaactcgcctcgcgagtaatatcactcgcctttgcgagttg 23252304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 571 - 749
Target Start/End: Complemental strand, 11912710 - 11912533
Alignment:
Q  571 atgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagt 670  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11912710 atgattaaatgggctatttctaga-ttcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaaat 11912612  T
Q  671 ttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcccttgggagttgct 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||    
T  11912611 ttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcacgagtaatttcactcgccattgcgagttgct 11912533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 301 - 560
Target Start/End: Complemental strand, 2824569 - 2824311
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||  ||||||||||| ||||    
T  2824569 gcaagaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtgcctctaatcccagctaa 2824470  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||  ||||||||||||||| || ||||||||||     
T  2824469 ggagatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatg-caaggacttgatttctccaagaatcttgatgaatc 2824371  T
Q  501 ctcactcaaacactagtgctctatgaaaacagaagaatttcgccctattctctctctaaa 560  Q
    | ||||||| ||||| ||| |  |  | ||||   | |||||||||||||||||||||||    
T  2824370 cacactcaatcactattgcccagtatacacagtgtattttcgccctattctctctctaaa 2824311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 301 - 561
Target Start/End: Original strand, 39806530 - 39806790
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| || |||||||||||| ||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  39806530 gcaagaataactttaatatcatgtaaattggtagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaa 39806629  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |  |||| ||||||||||| || || |||||||     
T  39806630 ggagatttagttcatcattgtcatgagaactttacaaaagtggaaggaaagttgagaatccatgcaaggaactcgatttctccaagaatctcgatgaatc 39806729  T
Q  501 ctcactcaaacactagtgctctatgaaaacagaagaatttcgccctattctctctctaaaa 561  Q
    | ||||| | ||||| ||| |  || |||||    | ||||||||||||||||||||||||    
T  39806730 cacactcgatcactattgcccactgtaaacaatgtattttcgccctattctctctctaaaa 39806790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 313 - 561
Target Start/End: Original strand, 13432334 - 13432583
Alignment:
Q  313 tcaatatcatgtaagttgctagaatcatataatacaa-gatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaaggagatttagt 411  Q
    |||||||||||||| |||||||||||||||| |  || ||||||||||||||||| | | || ||||||||| || ||||||||||||||||||||||||    
T  13432334 tcaatatcatgtaaattgctagaatcatatatttgaaagatcaaaagattacattatcaacttaatcaagtacctgtaatcccaactaaggagatttagt 13432433  T
Q  412 tcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaattctcactcaaac 511  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| || || |||||||||| | ||||||| |    
T  13432434 tcatcattgtcatgagaaaattacaaaagtggaaggaaagttgagaatccatgccaagaacttgatttctcaaagaatcttgatgaatccacactcaatc 13432533  T
Q  512 actagtgctctatgaaaacagaagaatttcgccctattctctctctaaaa 561  Q
    |||| |||  |||| ||||||   |||||||||||||| |||||||||||    
T  13432534 actattgcattatgtaaacagtgaaatttcgccctattttctctctaaaa 13432583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 571 - 736
Target Start/End: Original strand, 31073123 - 31073288
Alignment:
Q  571 atgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagt 670  Q
    ||||||||| ||||||||| |||| |||||  ||||| |||||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  31073123 atgattaaaagggctatttatagatttcttaatctgcatcaactcgcctcacgagtaactccattcgccatggcgagttgatgtttcttcaccattaagt 31073222  T
Q  671 ttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcc 736  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||  |||||||||    
T  31073223 ttgagccacgtcacccttgaggagtttaggccgccctaactcgcctcgcgagtaaattcactcgcc 31073288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 582 - 811
Target Start/End: Original strand, 44917185 - 44917413
Alignment:
Q  582 ggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgt 681  Q
    |||||||| ||||| | |||||||||||||||||||||||||||||||  ||||| || ||||||||||| ||| |||||||| |  | ||| ||||| |    
T  44917185 ggctatttatagaagtattgttctgcctcaactcgcctcgcgagtaacttcattctccatggcgagttgaggttacttcaccagtgggattgtgccacat 44917284  T
Q  682 cacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcccttgggagttgcttgttagcctttgcgagttgatggtgtgtgaat 781  Q
    ||||||| |||||||||| || ||||||||| ||||||| ||||||||||||||| ||| |||||||| ||| ||| |||||||||||||| | || ||     
T  44917285 cacctctaaggagtttag-ccgccctaactcacctcgcgggtaatatcactcgccattgcgagttgctggttcgccgttgcgagttgatggcgagtaaag 44917383  T
Q  782 tggtcttcctgcctcttgctcgcctttgct 811  Q
     |||||||||||||||||||||||||||||    
T  44917384 aggtcttcctgcctcttgctcgcctttgct 44917413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 576 - 724
Target Start/End: Original strand, 9869884 - 9870032
Alignment:
Q  576 taaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgag 675  Q
    |||||||||||||| || |||||| ||||||| || ||||||||||||||   |  |||||||| ||||||||||||||||||||||||||   |||| |    
T  9869884 taaatgggctatttataaaattctcgttctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaagtttcttcaccattggttttgtg 9869983  T
Q  676 ccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||||| |||||| |||||| ||  || ||||||||||||| |||||||    
T  9869984 ccacgtaacctctaaggagtctaaaccgccctaactcgccttgcgagta 9870032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 581 - 772
Target Start/End: Original strand, 32798516 - 32798706
Alignment:
Q  581 gggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacg 680  Q
    ||||||||| ||||| |  || ||||| |||||||||||||||||   |  |||||||  |||| ||| |||||| |||||| |||  ||||| ||||||    
T  32798516 gggctatttatagaacttctgatctgcttcaactcgcctcgcgagctccttcattcgctatggcaagt-gaagttccttcacgattgggtttgtgccacg 32798614  T
Q  681 tcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcccttgggagttgcttgttagcctttgcgagttgatgg 772  Q
    ||| || ||||||||||||||| |||||||||||||||||||||    |||||||| | | |||||||| ||| ||| ||||||||||||||    
T  32798615 tcatctgtgaggagtttaggccgccctaactcgcctcgcgagtacatgcactcgccatggcgagttgctcgttcgccgttgcgagttgatgg 32798706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 580 - 724
Target Start/End: Original strand, 28996799 - 28996942
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| |||||||||||||||||   |  |||||||| ||||||||||||||| ||||||||||  ||||| |||||    
T  28996799 tgggctatttatagaattctgattctgcatcaactcgcctcgcgagctccttcattcgccatggcgagttgaagttccttcaccattgggtttgtgccac 28996898  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| || ||| ||| |||  || |||| ||||||||||||||||    
T  28996899 gtcatctgtgaagag-ttaaaccgccctcactcgcctcgcgagta 28996942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 579 - 753
Target Start/End: Complemental strand, 1115424 - 1115250
Alignment:
Q  579 atgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagcca 678  Q
    ||||||||||| || || |  || ||||| |||||||||||||||||   |  |||||||| ||||||||| ||||| |||||| | |  ||||| ||||    
T  1115424 atgggctatttatataaattctgatctgcttcaactcgcctcgcgagctccttcattcgccatggcgagtttaagttccttcactagtgggtttgtgcca 1115325  T
Q  679 cgtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcccttgggagttgcttgtt 753  Q
    ||||| || |||||||| |||||| |||||||||||||||||||||    |||||||| | | ||||||||||||    
T  1115324 cgtcatctgtgaggagtctaggccgccctaactcgcctcgcgagtacatgcactcgccatggcgagttgcttgtt 1115250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 583 - 724
Target Start/End: Original strand, 35085796 - 35085937
Alignment:
Q  583 gctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtc 682  Q
    ||||||| |||||||||   ||||| || ||||||||||||||   |  |||||||| |||||||||| |||| |||||||||| |||||| ||||||||    
T  35085796 gctatttatagaattctaaatctgcatccactcgcctcgcgagctccttcattcgccatggcgagttggagttccttcaccattgagtttgtgccacgtc 35085895  T
Q  683 acctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    | |  |||| || |||  ||||||||||||||||||||||||    
T  35085896 atcagtgagaagcttaaaccaccctaactcgcctcgcgagta 35085937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 580 - 724
Target Start/End: Original strand, 1175386 - 1175529
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| | |||||||||||||||   |  |||||||| ||||||||||| ||| ||||||||||  ||||| |||||    
T  1175386 tgggctatttatagaattctgattctgcatgaactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccac 1175485  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| || ||| ||| |||| || |||||||||||||||| ||||    
T  1175486 gtcatctgtgaagag-ttagaccgccctaactcgcctcgcaagta 1175529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 580 - 724
Target Start/End: Original strand, 29002515 - 29002658
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| |||||||||||||||||   |  |||||||| |||||||||| |||| ||||||||||  ||||| |||||    
T  29002515 tgggctatttatagaattctgattctgcatcaactcgcctcgcgagctccttcattcgccatggcgagttggagttccttcaccattgggtttgtgccac 29002614  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| || ||| ||| |||  || |||| ||||||||||||||||    
T  29002615 gtcatctgtgaagag-ttaaaccgccctcactcgcctcgcgagta 29002658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 580 - 724
Target Start/End: Original strand, 26622253 - 26622396
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| | |||||||||||||||   |  |||||||| ||| ||||||| ||| ||||||||||  ||||| |||||    
T  26622253 tgggctatttatagaattctgattctgcatgaactcgcctcgcgagctccttcattcgccatggtgagttgaggttccttcaccattgggtttgtgccac 26622352  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| || ||| ||| |||| || ||||||||| |||||||||||    
T  26622353 gtcatctgtgaagag-ttagaccgccctaactcacctcgcgagta 26622396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 612 - 724
Target Start/End: Original strand, 43687455 - 43687567
Alignment:
Q  612 actcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtcacctctgaggagtttaggccaccctaact 711  Q
    ||||||||||||||  ||  |||||||| |||||||||||||||||||| |||||  ||||| ||||||||| |  |||| || |||  || ||||||||    
T  43687455 actcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccacgtcagcagtgagaagcttaaaccgccctaact 43687554  T
Q  712 cgcctcgcgagta 724  Q
    |||||||||||||    
T  43687555 cgcctcgcgagta 43687567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 580 - 736
Target Start/End: Original strand, 45023327 - 45023482
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| || ||||||||||||||   |  |||||||| ||||||||||| ||| |||| |||||  ||||| |||||    
T  45023327 tgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcgccattgggtttgtgccac 45023426  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcc 736  Q
    |||| || ||| |||  ||  || |||||||||||||||||||||| |||| |||||    
T  45023427 gtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaaatcattcgcc 45023482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 39052736 - 39052633
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| ||| |||||   ||||||| |||||||||||||||  ||  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  39052736 tgggctatttataggattctgagtctgccttaactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 39052637  T
Q  680 gtca 683  Q
    ||||    
T  39052636 gtca 39052633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 39059108 - 39059005
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| ||| |||||   ||||||| |||||||||||||||  ||  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  39059108 tgggctatttataggattctgagtctgccttaactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 39059009  T
Q  680 gtca 683  Q
    ||||    
T  39059008 gtca 39059005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 1115703 - 1115606
Alignment:
Q  329 tgctagaatcatataatacaagatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| |||||| | | |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  1115703 tgctagaaccatatatttctagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 1115606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 410
Target Start/End: Original strand, 30660313 - 30660422
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    ||||||||||| |||||||||  |||   |||||||||||||| || | |||||||||||||||   || |||  ||||||||||| |||||||||| ||    
T  30660313 gcaagaataatctcaatatcaaataaagagctagaatcatatattaaaggatcaaaagattacacaataggcttgatcaagtatctttaatcccaacaaa 30660412  T
Q  401 ggagatttag 410  Q
    ||||||||||    
T  30660413 ggagatttag 30660422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 410
Target Start/End: Original strand, 31473732 - 31473841
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    ||||||||||| |||||||||  |||   |||||||||||||| |  | |||||||||||||||| ||| |||  |||||||| ||||||||||||| ||    
T  31473732 gcaagaataatctcaatatcaaataaaaagctagaatcatatatttaaggatcaaaagattacatgctaggcttgatcaagtacctctaatcccaacaaa 31473831  T
Q  401 ggagatttag 410  Q
    | ||||||||    
T  31473832 gtagatttag 31473841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 302 - 425
Target Start/End: Original strand, 13249190 - 13249312
Alignment:
Q  302 caagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaag 401  Q
    |||||||||| |||||||||  |||   |||||||||||||| || |||| ||||||||||||| ||| |||  |||||||| ||||||| | ||| |||    
T  13249190 caagaataatctcaatatcaaataaagagctagaatcatatattaaaagaacaaaagattacatactaggcttgatcaagtacctctaat-ctaacaaag 13249288  T
Q  402 gagatttagttcatcattgtcatg 425  Q
    |||||||||||  ||||| |||||    
T  13249289 gagatttagttactcattatcatg 13249312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 582 - 629
Target Start/End: Original strand, 44917122 - 44917169
Alignment:
Q  582 ggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaac 629  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||    
T  44917122 ggctatttatagaagtcttgttctgcctcaactcgcctcgcgagtaac 44917169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 45016585 - 45016688
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  45016585 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 45016684  T
Q  680 gtca 683  Q
    ||||    
T  45016685 gtca 45016688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 1175127 - 1175204
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  1175127 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 1175204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 4600050 - 4600127
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  4600050 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 4600127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 28996530 - 28996607
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  28996530 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 28996607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 29002246 - 29002323
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  29002246 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 29002323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 329 - 425
Target Start/End: Original strand, 32798225 - 32798322
Alignment:
Q  329 tgctagaatcatataatacaagatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| |||||| | | | |||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  32798225 tgctagaaccatatatttctacatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 32798322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 583 - 724
Target Start/End: Original strand, 44242151 - 44242292
Alignment:
Q  583 gctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtc 682  Q
    ||||||| |||||||||   | ||| || ||||||||||||||   |  |||||||| ||||||||||||||| ||||||||||  ||||| ||||||||    
T  44242151 gctatttatagaattctaaatatgcatccactcgcctcgcgagcttcttcattcgccatggcgagttgaagttccttcaccattgggtttgtgccacgtc 44242250  T
Q  683 acctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    | |  |||| || |||  || |||||||||||||| ||||||    
T  44242251 atcagtgagaagcttaaaccgccctaactcgcctcacgagta 44242292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 45023056 - 45023133
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  45023056 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 45023133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 724
Target Start/End: Original strand, 4600352 - 4600464
Alignment:
Q  612 actcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtcacctctgaggagtttaggccaccctaact 711  Q
    ||||||||||||||  ||  |||||||| ||||||||||||||| ||||| ||||  ||||| |||| |||| |  |||| || |||  || ||||||||    
T  4600352 actcgcctcgcgagctacttcattcgccatggcgagttgaagttccttcatcattgggtttgtgccatgtcatcagtgagaagcttaaaccgccctaact 4600451  T
Q  712 cgcctcgcgagta 724  Q
    |||||||||||||    
T  4600452 cgcctcgcgagta 4600464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 724
Target Start/End: Complemental strand, 41304959 - 41304816
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  ||| || |||| ||||||||||||   |  |||||||| ||||||||||| ||| ||||||||||  ||||| |||||    
T  41304959 tgggctatttatagaattctgattcagcatcaaatcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccac 41304860  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
     ||| || ||| ||| |||  || ||||||||| |||||||||||    
T  41304859 atcatctgtgaagag-ttaaaccgccctaactcccctcgcgagta 41304816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 6239448 - 6239551
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  ||||||||  ||||||||||||||||||| |||||  ||||| |||||    
T  6239448 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccattgggtttgtgccac 6239547  T
Q  680 gtca 683  Q
    ||||    
T  6239548 gtca 6239551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 42092700 - 42092803
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||| ||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  42092700 tgggctctttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 42092799  T
Q  680 gtca 683  Q
    ||||    
T  42092800 gtca 42092803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 26621991 - 26622069
Alignment:
Q  349 agatcaaaagattacat-tctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    ||||||||||||||||| | |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  26621991 agatcaaaagattacatgtttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 26622069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 31072839 - 31072901
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttag 410  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| ||||||||||||    
T  31072839 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttag 31072901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 425
Target Start/End: Original strand, 44241830 - 44241953
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctca-atcaagtatctctaatcccaacta 399  Q
    ||||||||||  |||||||||  |||  |||||||| |||||| |   |||||||||||||||||  |||||| | |||||||| ||||||||||||| |    
T  44241830 gcaagaataacatcaatatcaaataa--tgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaa 44241927  T
Q  400 aggagatttagttcatcattgtcatg 425  Q
     |||||||||| |  |||||||||||    
T  44241928 tggagatttagctactcattgtcatg 44241953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 9869626 - 9869703
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||  |  |||||||||||    
T  9869626 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttaactactcattgtcatg 9869703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 376 - 424
Target Start/End: Original strand, 44916887 - 44916935
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcat 424  Q
    |||||||||||||||||||||| |||||||||||| |  ||||||||||    
T  44916887 atcaagtatctctaatcccaacaaaggagatttagctactcattgtcat 44916935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 41305221 - 41305158
Alignment:
Q  349 agatcaaaagattacat-tctaagctca-atcaagtatctctaatcccaactaaggagatttag 410  Q
    ||||||||||||||||| | |||||| | |||||||| ||||||||||||| ||||||||||||    
T  41305221 agatcaaaagattacatgtttaagctaagatcaagtacctctaatcccaacaaaggagatttag 41305158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 774 - 808
Target Start/End: Original strand, 23252310 - 23252344
Alignment:
Q  774 gtgtgaattggtcttcctgcctcttgctcgccttt 808  Q
    ||||||||||||||| |||||||||||||||||||    
T  23252310 gtgtgaattggtctttctgcctcttgctcgccttt 23252344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 755 - 808
Target Start/End: Complemental strand, 11912417 - 11912364
Alignment:
Q  755 gcctttgcgagttgatggtgtgtgaattggtcttcctgcctcttgctcgccttt 808  Q
    ||||||||| |||||  | | |||||||||||||| ||||||||||||||||||    
T  11912417 gcctttgcgtgttgagtgcgagtgaattggtcttcatgcctcttgctcgccttt 11912364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 11912983 - 11912886
Alignment:
Q  329 tgctagaatcatataatacaagatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    ||||||||||||||| |   | |||||||||||||||  | |||| | |||||||| |||||||| |||| |||||||||||| |  |||||||||||    
T  11912983 tgctagaatcatatatttataaatcaaaagattacatgtttagctaagatcaagtacctctaatctcaacaaaggagatttagctactcattgtcatg 11912886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 23762009 - 23761960
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  23762009 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 23761960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 35085527 - 35085604
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| || |||||| ||| |||||||||||| |  |||||||||||    
T  35085527 agatcaaaagattacatgttaagctaagatcaagtacctttaatcctaacaaaggagatttaggtactcattgtcatg 35085604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 39053011 - 39052962
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  39053011 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 39052962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 39059383 - 39059334
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  39059383 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 39059334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 45016330 - 45016379
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  45016330 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 45016379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 178; Significance: 1e-95; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 301 - 557
Target Start/End: Original strand, 36842261 - 36842517
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  36842261 gcaagaataactttaatatcatgtaaattgctagaatcatataatacaagatcaaaagattacattttaagctcaatcaagtacctctaatcccaactaa 36842360  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||     
T  36842361 ggagatttagttcatcattgtcatgagaactttacaaaagtggaaggaaagttgagaatccatgccaagaacttgatttctccaagaatcttgatgaatc 36842460  T
Q  501 ctcac-tcaaacactagtgctctatgaaaacagaagaatttcgccctattctctctct 557  Q
    | | | |||| ||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  36842461 cactcttcaatcactattgctctatgaaaa-agaagaatttctccctattctctctct 36842517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 301 - 515
Target Start/End: Original strand, 41456079 - 41456293
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||||||||||||||||||| |||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||    
T  41456079 gcaagaataatttcaatatcatgtaaattgctagaattatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaacgaa 41456178  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||| || ||||||||||     
T  41456179 ggagatttagttcatcattgtcatgagaacattacaaacgtggaaggaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 41456278  T
Q  501 ctcactcaaacacta 515  Q
    | ||||||| |||||    
T  41456279 cacactcaatcacta 41456293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 301 - 560
Target Start/End: Original strand, 17863956 - 17864215
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    ||||||||||  |||||||||  ||| |||||||||||||||| |  |||| ||||||||||||||||||||| ||||||||| ||||||||||||| ||    
T  17863956 gcaagaataaactcaatatcacataaattgctagaatcatatatttaaagaacaaaagattacattctaagcttaatcaagtacctctaatcccaacaaa 17864055  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    |||||||||| | ||||||||||||  ||||||||||||||||||| |||| |||  |||| |||||| | ||||||||||| ||    ||||||||||     
T  17864056 ggagatttagctgatcattgtcatgataacattacaaaagtggaagaaaagatgaagatccgtgccaagagcttgatttctcaaaggttcttgatgaatc 17864155  T
Q  501 ctcactcaaacactagtgctctatgaa-aacagaagaatttcgccctattctctctctaaa 560  Q
    | ||||||| ||||  ||| ||||||| ||||| |   | |||||||||||||||||||||    
T  17864156 cacactcaatcactcttgccctatgaagaacagta-tttatcgccctattctctctctaaa 17864215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 301 - 560
Target Start/End: Complemental strand, 37439283 - 37439024
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    ||||||||||  |||||||||||||| |||||||||||||||| |  ||||||||||||||||||||||||||  |||||||| ||||||||||||| ||    
T  37439283 gcaagaataaactcaatatcatgtaaattgctagaatcatatattcaaagatcaaaagattacattctaagcttgatcaagtacctctaatcccaacaaa 37439184  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    |||||||||||| ||||||||||||  |||  |||||||||||||| |||| |||  |||||||| || |  |||||||||| || |  |||   ||||     
T  37439183 ggagatttagttgatcattgtcatgataaccatacaaaagtggaagaaaagatgaagatccatgctaagagattgatttctcaaagattcttagagaatc 37439084  T
Q  501 ctcactcaaacactagtgctctatg-aaaacagaagaatttcgccctattctctctctaaa 560  Q
    | || |||||||||  ||||||||| ||||||| | || ||||||||||||||| ||||||    
T  37439083 cacaatcaaacactcttgctctatgtaaaacag-ataacttcgccctattctctgtctaaa 37439024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 580 - 724
Target Start/End: Complemental strand, 21341369 - 21341225
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| |||| ||||||||||||   |  |||||||| ||||||||||| ||| ||||||||||   |||| |||||    
T  21341369 tgggctatttatagaattctgattctgcatcaattcgcctcgcgagcttcttcattcgccatggcgagttgaggttccttcaccattggttttgtgccac 21341270  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| || |||||||| || | | |||||||||||||||||||||    
T  21341269 gtcagctgtgaggagtctaagtcgccctaactcgcctcgcgagta 21341225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 580 - 724
Target Start/End: Complemental strand, 16816766 - 16816623
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| | ||||||||||| |||   |  |||||||| ||||||||||| ||| ||||||||||  ||||| |||||    
T  16816766 tgggctatttatagaattctgattctgcatgaactcgcctcgtgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccac 16816667  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| || ||| ||| |||| || |||||||||||||||| ||||    
T  16816666 gtcatctgtgaagag-ttagaccgccctaactcgcctcgcaagta 16816623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 580 - 724
Target Start/End: Complemental strand, 16855923 - 16855780
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| | ||||||||||| |||   |  |||||||| ||||||||||| ||| ||||||||||  ||||| |||||    
T  16855923 tgggctatttatagaattctgattctgcatgaactcgcctcgtgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccac 16855824  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| || ||| ||| |||| || |||||||||||||||| ||||    
T  16855823 gtcatctgtgaagag-ttagaccgccctaactcgcctcgcaagta 16855780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 580 - 722
Target Start/End: Complemental strand, 21067357 - 21067215
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| || ||||||   ||||  |||||||||||||||||   |  |||||||| ||||||||||  ||| ||||||||||  ||||| |||||    
T  21067357 tgggctatttataaaattctgactctgtatcaactcgcctcgcgagctccttcattcgccatggcgagttgcggttccttcaccattgggtttgtgccac 21067258  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgag 722  Q
    |||| || ||| |||||||| || || ||||||||||||||||    
T  21067257 gtcagctgtgaagagtttagaccgccataactcgcctcgcgag 21067215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 580 - 736
Target Start/End: Complemental strand, 36781612 - 36781457
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| || ||||||||||||||   |  ||||||||  |||||||||| ||| |||| |||||  ||||| |||||    
T  36781612 tgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccagggcgagttgaggttccttcgccattgggtttgtgccac 36781513  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcc 736  Q
    |||| || ||| |||  ||  || |||||||||||||||||||||| |||| |||||    
T  36781512 gtcagctgtga-gagggtaaaccgccctaactcgcctcgcgagtaaaatcattcgcc 36781457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 2158415 - 2158518
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  2158415 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 2158514  T
Q  680 gtca 683  Q
    ||||    
T  2158515 gtca 2158518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 2164831 - 2164934
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  2164831 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 2164930  T
Q  680 gtca 683  Q
    ||||    
T  2164931 gtca 2164934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 34834230 - 34834127
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  34834230 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 34834131  T
Q  680 gtca 683  Q
    ||||    
T  34834130 gtca 34834127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 34840674 - 34840571
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  34840674 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 34840575  T
Q  680 gtca 683  Q
    ||||    
T  34840574 gtca 34840571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 45012787 - 45012890
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  45012787 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 45012886  T
Q  680 gtca 683  Q
    ||||    
T  45012887 gtca 45012890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 580 - 730
Target Start/End: Original strand, 15853342 - 15853491
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| || ||||||||||||||   |  ||||||||  |||||||||| ||| |||| |||||  ||||| |||||    
T  15853342 tgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccagggcgagttgaggttccttcgccattgggtttgtgccac 15853441  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatca 730  Q
    |||| || ||| |||  ||  || |||||||||||||||||||||| ||||    
T  15853442 gtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaaatca 15853491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 2021149 - 2021072
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  2021149 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 2021072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 15853071 - 15853148
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  15853071 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 15853148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 301 - 451
Target Start/End: Complemental strand, 24852776 - 24852629
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatata-atacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaacta 399  Q
    ||||||||||  |||||||||  ||| | ||||||||||||||  || ||||||||||||||||| ||||||||  |||||||| || |||| ||||| |    
T  24852776 gcaagaataaactcaatatcacataaatagctagaatcatatatttaaaagatcaaaagattaca-tctaagcttgatcaagtacctgtaattccaacaa 24852678  T
Q  400 aggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaag 451  Q
    |||||| |||  | ||||   |||||  ||||||||||||||||||| ||||    
T  24852677 aggagagttaaatgatca---tcatgataacattacaaaagtggaagaaaag 24852629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 29485416 - 29485493
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  29485416 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 29485493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 736
Target Start/End: Complemental strand, 42930809 - 42930655
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| || ||||||||||||||   |  ||||||||  |||||||||| ||| |||| |||||  ||||| |||||    
T  42930809 tgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccagggcgagttgaggttccttcgccattgggtttgtgccac 42930710  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcc 736  Q
    |||| || ||||  | | |  || |||||||||||||||||||||| |||| |||||    
T  42930709 gtcagctgtgagaggctaa--ccgccctaactcgcctcgcgagtaaaatcattcgcc 42930655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 42931073 - 42930996
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  42931073 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 42930996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 45012504 - 45012581
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  45012504 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 45012581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 724
Target Start/End: Complemental strand, 2020876 - 2020733
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| | |||| ||||||||||      |||||| | ||||||||||| ||| ||||||||||  ||||| |||||    
T  2020876 tgggctatttatagaattctgattctgcattaacttgcctcgcgagctctttcattcgtcatggcgagttgaggttccttcaccattgggtttgtgccac 2020777  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| || ||| ||| |||  || |||||||||||||||||||||    
T  2020776 gtcatctgtgaagag-ttaaaccgccctaactcgcctcgcgagta 2020733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 12951602 - 12951705
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||| | |||||||||||||||||||| |||||  ||||| |||||    
T  12951602 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgtcatggcgagttgaagtttcttccccattgggtttgtgccac 12951701  T
Q  680 gtca 683  Q
    ||||    
T  12951702 gtca 12951705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 724
Target Start/End: Complemental strand, 11909313 - 11909264
Alignment:
Q  675 gccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    ||||||||| |||||||||||||  ||| |||||||||||||||||||||    
T  11909313 gccacgtcagctctgaggagttttagccgccctaactcgcctcgcgagta 11909264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 21331695 - 21331618
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| ||||| |||||| |  |||||||||||    
T  21331695 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggatatttagctactcattgtcatg 21331618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 21341627 - 21341550
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| ||||| |||||| |  |||||||||||    
T  21341627 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggatatttagctactcattgtcatg 21341550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 301 - 425
Target Start/End: Original strand, 13163291 - 13163414
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    ||||||||||| |||||||||  | |  ||||| ||||||||| || | ||||||||||||||||  |  |||  |||||||| ||||||||||||| |     
T  13163291 gcaagaataatctcaatatcaaatcaaatgctacaatcatatattata-gatcaaaagattacatgttttgcttgatcaagtacctctaatcccaacaat 13163389  T
Q  401 ggagatttagttcatcattgtcatg 425  Q
    |||||||||| |  |||||||||||    
T  13163390 ggagatttagctactcattgtcatg 13163414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 43268380 - 43268458
Alignment:
Q  349 agatcaaaagattacat-tctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    ||||||||||||||||| | ||||||   |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  43268380 agatcaaaagattacatgtttaagctatgatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 43268458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 2158161 - 2158210
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  2158161 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 2158210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 2164577 - 2164626
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  2164577 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 2164626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 12951345 - 12951394
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  12951345 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 12951394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 13901628 - 13901579
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  13901628 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 13901579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 16817003 - 16816954
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  16817003 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 16816954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 16856160 - 16856111
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  16856160 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 16856111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 425
Target Start/End: Complemental strand, 34745039 - 34744914
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagat-tacattctaagctcaatcaagtatctctaatcccaacta 399  Q
    ||||| ||||| ||||||||| ||||    ||||||||||||| |  | ||||||||||  ||||| ||| |||  ||||||||  |||||||||||| |    
T  34745039 gcaaggataatatcaatatcaagtaaaagactagaatcatatatttaaggatcaaaagaaatacatactatgcttgatcaagtacatctaatcccaacaa 34744940  T
Q  400 aggagatttagttcatcattgtcatg 425  Q
    ||||||||||| |  |||||||||||    
T  34744939 aggagatttagctactcattgtcatg 34744914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 36781857 - 36781808
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  36781857 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 36781808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 176; Significance: 2e-94; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 301 - 564
Target Start/End: Original strand, 14394171 - 14394434
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| ||||||||||| ||| |||||||||||||||| | |||||||||| |||||||||||||||| || |||||| |||||||| |||||||    
T  14394171 gcaagaataacttcaatatcatttaaattgctagaatcatatatttcaagatcaaaggattacattctaagcttaaacaagtacctctaatctcaactaa 14394270  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| || || |||||||||||    
T  14394271 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaagcaaagttgagaatctatgccaagaacttgatttctcaaagaatcttgatgaatt 14394370  T
Q  501 ctcactcaaacactagtgctctatgaaaacagaagaatttcgccctattctctctctaaaaatg 564  Q
      ||||||||||||  |||||||||||||||| | |||||||||||||||||||||||||||||    
T  14394371 aacactcaaacactcatgctctatgaaaacagtaaaatttcgccctattctctctctaaaaatg 14394434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 301 - 560
Target Start/End: Complemental strand, 7933675 - 7933416
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  7933675 gcaagaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaa 7933576  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
     |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |  |||||||||||||||| || ||||||||||     
T  7933575 agagatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 7933476  T
Q  501 ctcactcaaacactagtgctctatgaaaacagaagaatttcgccctattctctctctaaa 560  Q
    | ||||||| ||||| ||| |  |  | ||||   | |||||||||||||||||||||||    
T  7933475 cacactcaatcactattgcccagtatacacagtgtattttcgccctattctctctctaaa 7933416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 301 - 564
Target Start/End: Complemental strand, 24220021 - 24219758
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| ||||||||||||||| |||||||||||||||| |  ||||||||||| ||||||| | | || ||||||||| ||||||||||||||||    
T  24220021 gcaagaataacttcaatatcatgtaaattgctagaatcatatattgaaagatcaaaagtttacattatcaacttaatcaagtacctctaatcccaactaa 24219922  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    ||||||||||||||| ||||||| | |||||||||||| || ||| ||||| |||  ||| ||||||| |||||||||||||||| || ||||||||||     
T  24219921 ggagatttagttcattattgtcacgagaacattacaaacgtagaaagaaagatgaagatctatgccaagaacttgatttctccaagaatcttgatgaatc 24219822  T
Q  501 ctcactcaaacactagtgctctatgaaaacagaagaatttcgccctattctctctctaaaaatg 564  Q
    | ||||||||||| | |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  24219821 cacactcaaacaccattgctctatgaaaacagaagaatttcgccctattcactctctataaatg 24219758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 571 - 736
Target Start/End: Complemental strand, 45067864 - 45067699
Alignment:
Q  571 atgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagt 670  Q
    ||||||||| ||||||||| ||||||||||  ||| | ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  45067864 atgattaaaagggctatttatagaattcttaatctacatcaactcgcctcgcgagtaactccattcgccatggcgagttgatgtttcttcaccattaagt 45067765  T
Q  671 ttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcc 736  Q
    |||||||||||||||  |||| |||||||||| ||||||||||||||||||||||  |||||||||    
T  45067764 ttgagccacgtcacccttgagaagtttaggccgccctaactcgcctcgcgagtaaattcactcgcc 45067699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 301 - 425
Target Start/End: Complemental strand, 29336811 - 29336687
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||| |  |||||||||||||||||| |||||||  |||||||| ||||||||||||| ||    
T  29336811 gcaagaataatctcaatatcaagtaaaatgctagaaccatatatttgaagatcaaaagattacatactaagcttgatcaagtacctctaatcccaacaaa 29336712  T
Q  401 ggagatttagttcatcattgtcatg 425  Q
    ||||| ||||||  |||||||||||    
T  29336711 ggagaattagttactcattgtcatg 29336687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 632 - 747
Target Start/End: Original strand, 12769742 - 12769857
Alignment:
Q  632 cattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcac 731  Q
    |||||||| ||||||||||||||| ||||||||||  ||||| ||||||||| || ||||  |  ||  |||||||||||||||||||||||| | ||||    
T  12769742 cattcgccatggcgagttgaagttccttcaccattgggtttgtgccacgtcatctgtgagaggcctaaaccaccctaactcgcctcgcgagtactttcac 12769841  T
Q  732 tcgcccttgggagttg 747  Q
    ||||| ||| ||||||    
T  12769842 tcgccattgcgagttg 12769857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 612 - 724
Target Start/End: Complemental strand, 16710068 - 16709956
Alignment:
Q  612 actcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtcacctctgaggagtttaggccaccctaact 711  Q
    ||||||||||||||  ||  |||||||| |||||||||||||||||||| |||||  ||||| ||||||||| |  |||| || |||  || ||||||||    
T  16710068 actcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccacgtcagcaatgagaagcttaaaccgccctaact 16709969  T
Q  712 cgcctcgcgagta 724  Q
    |||||||||||||    
T  16709968 cgcctcgcgagta 16709956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 736
Target Start/End: Original strand, 1238996 - 1239161
Alignment:
Q  571 atgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagt 670  Q
    |||||| |||||||||||| |||| ||||   ||||  || ||||||||||||||   |  |||||||| ||||||||||||||| ||||||||||  ||    
T  1238996 atgattgaatgggctatttatagagttctaaatctgtgtctactcgcctcgcgagcttcttcattcgccatggcgagttgaagttccttcaccattgggt 1239095  T
Q  671 ttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcc 736  Q
    ||| ||||||||| |  |||  || |||  || || |||||||||||||||||| | |||||||||    
T  1239096 ttgtgccacgtcatcagtgaaaagcttaaaccgccttaactcgcctcgcgagtactttcactcgcc 1239161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 603 - 724
Target Start/End: Original strand, 15013205 - 15013326
Alignment:
Q  603 tctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtcacctctgaggagtttaggcc 702  Q
    ||||| |||||||||||||||||   |  |||||||| ||||||||| || || |||||||| |  ||||| ||||||||| || |||||||| ||| ||    
T  15013205 tctgcttcaactcgcctcgcgagctccttcattcgccatggcgagtttaaattccttcaccagtgggtttgtgccacgtcatctgtgaggagtctagacc 15013304  T
Q  703 accctaactcgcctcgcgagta 724  Q
     |||||||||||||||| ||||    
T  15013305 gccctaactcgcctcgcaagta 15013326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 6463994 - 6463891
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  6463994 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 6463895  T
Q  680 gtca 683  Q
    ||||    
T  6463894 gtca 6463891  T

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Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 7312151 - 7312254
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  7312151 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 7312250  T
Q  680 gtca 683  Q
    ||||    
T  7312251 gtca 7312254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 36004902 - 36004799
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  36004902 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 36004803  T
Q  680 gtca 683  Q
    ||||    
T  36004802 gtca 36004799  T

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Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 36425431 - 36425354
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  36425431 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 36425354  T

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Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 8012738 - 8012635
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||| ||| |||||||||||||||||||| |||||  ||||| |||||    
T  8012738 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcatttgccatggcgagttgaagtttcttccccattgggtttgtgccac 8012639  T
Q  680 gtca 683  Q
    ||||    
T  8012638 gtca 8012635  T

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Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 11357894 - 11357832
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttag 410  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| ||||||||||||    
T  11357894 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttag 11357832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 425
Target Start/End: Original strand, 15012889 - 15012986
Alignment:
Q  329 tgctagaatcatataatacaagatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| |||||| | | | |||||||||||||||  ||| || | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  15012889 tgctagaaccatatatttctatatcaaaagattacatgttaaactaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 15012986  T

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Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 26250293 - 26250216
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  | |||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  26250293 agatcaaaagattacatgtttagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 26250216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 36076769 - 36076872
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  ||||| || ||||||||||||||||||||  ||||  ||||| |||||    
T  36076769 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcaccatggcgagttgaagtttcttcctcattgggtttgtgccac 36076868  T
Q  680 gtca 683  Q
    ||||    
T  36076869 gtca 36076872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 349 - 409
Target Start/End: Original strand, 1238735 - 1238797
Alignment:
Q  349 agatcaaaagattacat-tctaagctca-atcaagtatctctaatcccaactaaggagattta 409  Q
    ||||||||||||||||| | |||||| | |||||||| ||||||||||||| |||||||||||    
T  1238735 agatcaaaagattacatgtttaagctaagatcaagtacctctaatcccaacaaaggagattta 1238797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 45068117 - 45068055
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttag 410  Q
    |||||||||||||||||  | |||| | |||||||| ||||||||||||| ||||||||||||    
T  45068117 agatcaaaagattacatgtttagctaagatcaagtacctctaatcccaacaaaggagatttag 45068055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 6464249 - 6464200
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  6464249 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 6464200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 7311898 - 7311947
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  7311898 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 7311947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 8012993 - 8012944
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  8012993 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 8012944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 16710340 - 16710291
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||||||| | |||||||||| |  |||||||||||    
T  16710340 atcaagtatctctaatcccaacaagggagatttagctactcattgtcatg 16710291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 36005155 - 36005106
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  36005155 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 36005106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 36021471 - 36021422
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  36021471 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 36021422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 36076516 - 36076565
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  36076516 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 36076565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 5e-80; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 301 - 560
Target Start/End: Complemental strand, 3413039 - 3412780
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| ||||||||||||||| |||||||||||||||| |  ||||||||||| ||||||| | | || ||||||||| ||||||||||||||||    
T  3413039 gcaagaataacttcaatatcatgtaaattgctagaatcatatattgaaagatcaaaagtttacattatcaacttaatcaagtacctctaatcccaactaa 3412940  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||  ||||||| ||| |||||||||||||||| || ||||||||||     
T  3412939 ggagatttagttcatcattgtcatgagaacattacaaaagtggaaagaaagatgaagatccatggcaagaacttgatttctccaagaatcttgatgaatc 3412840  T
Q  501 ctcactcaaacactagtgctctatgaaaacagaagaatttcgccctattctctctctaaa 560  Q
    | |||||||||||   |||||||||||||||||||||||||||| |||||||||| ||||    
T  3412839 cacactcaaacacccttgctctatgaaaacagaagaatttcgccatattctctctataaa 3412780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 301 - 564
Target Start/End: Complemental strand, 12918699 - 12918436
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| ||||||||||||||| ||| |||||||||||| |  ||||||||||| ||||||| | | || ||||||||| ||||||||||||||||    
T  12918699 gcaagaataacttcaatatcatgtaaattgttagaatcatatattgaaagatcaaaagtttacattatcaacttaatcaagtacctctaatcccaactaa 12918600  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||  ||||||||||| |||||||||||| ||| || ||||||||||     
T  12918599 ggagatttagttcatcattgtcatgagaacattacaaaagtggaaagaaagatgaagatccatgccaagaacttgatttcttcaagaatcttgatgaatc 12918500  T
Q  501 ctcactcaaacactagtgctctatgaaaacagaagaatttcgccctattctctctctaaaaatg 564  Q
    | |||||||||||   ||| || ||||||||||||||||||||||||||||||||||| |||||    
T  12918499 cacactcaaacacccttgcactgtgaaaacagaagaatttcgccctattctctctctacaaatg 12918436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 301 - 515
Target Start/End: Original strand, 9843822 - 9844036
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||     
T  9843822 gcaagaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactac 9843921  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
     |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |  |||||||||||||||| || ||||||||||     
T  9843922 agagatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 9844021  T
Q  501 ctcactcaaacacta 515  Q
    | ||||||| |||||    
T  9844022 cacactcaatcacta 9844036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 301 - 515
Target Start/End: Complemental strand, 2155869 - 2155656
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| || |||||||||||| |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  2155869 gcaagaataactttaatatcatgtaaattgctagaatcatatattacaagattaaaatattacattctaagctcaatcaagtacctctaatcccaactaa 2155770  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||  ||||||||||||||| || ||||||||||     
T  2155769 ggagatttagttcatcattgtcatgagaacattacaaaagtggaaggaaaattgagaatccatg-caaggacttgatttctccaagaatcttgatgaatc 2155671  T
Q  501 ctcactcaaacacta 515  Q
    | ||||||| |||||    
T  2155670 cacactcaatcacta 2155656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 301 - 558
Target Start/End: Complemental strand, 19853277 - 19853020
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| ||||||| ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19853277 gcaagaataacttcaataccatgtaaattgctagaataatatattacaagatcaaaagattacattctaagcttaatcaagtatctctaatcccaactaa 19853178  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaa-cttgatgaat 499  Q
    ||||||||||||||||||||||||| |||   ||||||||||||||||||| |||  |||||||| || |  |||||||||| |||||| ||||||||||    
T  19853177 ggagatttagttcatcattgtcatgagaaacatacaaaagtggaaggaaagatgaagatccatgctaagagattgatttctc-aacaaatcttgatgaat 19853079  T
Q  500 tctcactcaaacactagtgctctatgaaaacagaagaatttcgccctattctctctcta 558  Q
     | ||||||  ||||  |||| ||||||||||| | | ||||||| |||||||||||||    
T  19853078 ccacactcactcactcttgctatatgaaaacagtaaattttcgccatattctctctcta 19853020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 582 - 749
Target Start/End: Original strand, 2439580 - 2439747
Alignment:
Q  582 ggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgt 681  Q
    |||||||| |||||||| || | ||| ||||||||||||||||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  2439580 ggctatttatagaattcctgatttgcatcaactcgcctcgcgagtaactccattcgccatggtgagttgatgtttcttcaccattaagtttgagccacgt 2439679  T
Q  682 cacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcccttgggagttgct 749  Q
    ||||||||||||||||||| | |||||||| |||||||||||||| ||||||||| ||| ||||||||    
T  2439680 cacctctgaggagtttagggcgccctaacttgcctcgcgagtaatttcactcgccattgcgagttgct 2439747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 313 - 559
Target Start/End: Complemental strand, 30579927 - 30579680
Alignment:
Q  313 tcaatatcatgtaagttgctagaatcatataata-caagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaaggagatttagt 411  Q
    |||||||||||||| |||||||||||||||| |  |||||||||||||||||||| | | || ||| ||||| ||||||||| ||||||||||||||| |    
T  30579927 tcaatatcatgtaaattgctagaatcatatatttgcaagatcaaaagattacattatcaacttaataaagtacctctaatccaaactaaggagatttaat 30579828  T
Q  412 tcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaa-cttgatgaattctcactcaaa 510  Q
    ||||||||||| || ||||||||||||||||| ||||||  |||  ||| |||  || |  ||||||||| ||||||| |||||||||| | ||||||      
T  30579827 tcatcattgtcttgagaacattacaaaagtggtaggaaatatgaagatcaatgataagagattgatttct-caacaaatcttgatgaatccacactcact 30579729  T
Q  511 cactagtgctctatgaaaacagaagaatttcgccctattctctctctaa 559  Q
    ||||  |||||||||||||| |   | |||| |||||||||||||||||    
T  30579728 cactcttgctctatgaaaacggtgaattttcaccctattctctctctaa 30579680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 571 - 725
Target Start/End: Complemental strand, 12505216 - 12505063
Alignment:
Q  571 atgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagt 670  Q
    ||||| || |||||||||| ||||||||   || | | |||||||||||||||||||||  |||||||  |||||||| || ||| |||||||| |  ||    
T  12505216 atgatcaagtgggctatttatagaattcccattattcatcaactcgcctcgcgagtaacttcattcgcaatggcgagt-gaggttacttcaccagtgggt 12505118  T
Q  671 ttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaa 725  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||    
T  12505117 ttgagccacatcacctttgaggagtttaggccgccctaactcgcctcgcgagtaa 12505063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 301 - 437
Target Start/End: Original strand, 34738612 - 34738748
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaa-gatcaaaagattacattctaagctcaatcaagtatctctaatcccaacta 399  Q
    ||||||||||  | |||||||  ||| |||||||||||||||| |  || |||||||||||||||| |||||||  |||||||| ||||||||||||| |    
T  34738612 gcaagaataaacttaatatcacataaattgctagaatcatatatttgaaagatcaaaagattacat-ctaagcttgatcaagtacctctaatcccaacaa 34738710  T
Q  400 aggagatttagttcatcattgtcatgtgaacattacaa 437  Q
    ||||||||||||| ||||||||||||  ||||||||||    
T  34738711 aggagatttagttgatcattgtcatgacaacattacaa 34738748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 301 - 497
Target Start/End: Original strand, 42747558 - 42747754
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    ||||||||||| |||||||||  |||   |||||||||||||| |  |||||||||||||||||| ||| |||  ||||||||  |||||||||||| ||    
T  42747558 gcaagaataatctcaatatcaaataaagagctagaatcatatattcaaagatcaaaagattacatactaggcttgatcaagtacgtctaatcccaacaaa 42747657  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatga 497  Q
    |||||||||| |  ||||| |||||  | | |||||||| |||||| || | |||  || ||||| || | ||||||||||| ||||  ||||||||    
T  42747658 ggagatttagctactcattctcatggtagctttacaaaaatggaagaaatgatgaagattcatgctaagatcttgatttctcaaacattcttgatga 42747754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 635 - 724
Target Start/End: Complemental strand, 30579594 - 30579505
Alignment:
Q  635 tcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    ||||| ||||||||||| |||||||||||| |  ||||  ||||||||| ||||||||||||| |||| || ||||||||||||||||||    
T  30579594 tcgccatggcgagttgatgtttcttcaccagtgggtttctgccacgtcagctctgaggagttttggccgccttaactcgcctcgcgagta 30579505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 580 - 724
Target Start/End: Complemental strand, 29414097 - 29413954
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| || ||||||||||||||   |  |||||||| ||||||||||| ||| ||||||||||  ||||| |||||    
T  29414097 tgggctatttatagaattctgattctgcatccactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccac 29413998  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| || ||| ||| |||  || |||| ||||||||||||||||    
T  29413997 gtcatctgtgaagag-ttaaaccgccctcactcgcctcgcgagta 29413954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 585 - 724
Target Start/End: Original strand, 5877015 - 5877153
Alignment:
Q  585 tatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtcac 684  Q
    ||||| |||||||||  |||||| |||||||||||||||||   |  |||||||| ||||||||||| ||| ||||||||||  ||||| |||| ||||     
T  5877015 tatttatagaattctgattctgcatcaactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccatgtcat 5877114  T
Q  685 ctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    || ||| ||| |||  || |||||||||||||||||||||    
T  5877115 ctgtgaagag-ttaaaccgccctaactcgcctcgcgagta 5877153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 34356683 - 34356580
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| ||| |||||   ||||||| |||||||||||||||  ||  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  34356683 tgggctatttataggattctgagtctgccttaactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 34356584  T
Q  680 gtca 683  Q
    ||||    
T  34356583 gtca 34356580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 603 - 749
Target Start/End: Original strand, 2823072 - 2823218
Alignment:
Q  603 tctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtcacctctgaggagtttaggcc 702  Q
    ||||| |||||||| || |||| ||||  |||||||| |||||||||||  ||||||||||| |   | || | |||||||||||||||||||||  |||    
T  2823072 tctgcatcaactcgtcttgcgaataacttcattcgccatggcgagttgagatttcttcaccagtggatctgtgacacgtcacctctgaggagttttagcc 2823171  T
Q  703 accctaactcgcctcgcgagtaatatcactcgcccttgggagttgct 749  Q
     ||||||||||||| | ||||||   |||||||| ||| ||||||||    
T  2823172 gccctaactcgccttgtgagtaaatccactcgccattgcgagttgct 2823218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 583 - 724
Target Start/End: Original strand, 22360758 - 22360898
Alignment:
Q  583 gctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtc 682  Q
    ||||||| |||||||||  |||||  |||||||||||||||||   |  |||||||| ||||||||||| ||| ||||||||||  ||||| ||||||||    
T  22360758 gctatttatagaattctgattctgtatcaactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccacgtc 22360857  T
Q  683 acctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |  | ||| ||| |||  || |||||||||||||||||||||    
T  22360858 atatgtgaagag-ttaaaccgccctaactcgcctcgcgagta 22360898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 34358474 - 34358371
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| ||| |||||   ||||||| ||||||||||||| |  ||  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  34358474 tgggctatttataggattctgagtctgccttaactcgcctcgcgggctacttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 34358375  T
Q  680 gtca 683  Q
    ||||    
T  34358374 gtca 34358371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 2958380 - 2958457
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  2958380 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 2958457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 2966849 - 2966926
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  2966849 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 2966926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 4974084 - 4974161
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  4974084 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 4974161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 571 - 724
Target Start/End: Original strand, 4974349 - 4974502
Alignment:
Q  571 atgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagt 670  Q
    |||||| |||||||||||| || ||||||   ||||  || ||||||||||||||   |  |||||||| |||| |||||||||| ||| ||||||  ||    
T  4974349 atgattgaatgggctatttataaaattctaaatctgtatccactcgcctcgcgagctccttcattcgccatggcaagttgaagttcctttaccattgggt 4974448  T
Q  671 ttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    ||| ||||||||| |  |||| || |||  || |||||||||||||||||||||    
T  4974449 ttgtgccacgtcatcagtgagaagcttaaaccgccctaactcgcctcgcgagta 4974502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 25894350 - 25894273
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  25894350 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 25894273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 724
Target Start/End: Original strand, 22314621 - 22314764
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  || ||  ||||||| |||||||||   |  |||||||| ||||||||||| ||| ||||||||||  ||||| ||||     
T  22314621 tgggctatttatagaattctgattttgtatcaactcacctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccaa 22314720  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| || ||| ||| |||  || |||||||||||||||||||||    
T  22314721 gtcatctgtgaagag-ttaaaccgccctaactcgcctcgcgagta 22314764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 2958664 - 2958767
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  ||||||||  ||||||||||||||||||| |||||  ||||| |||||    
T  2958664 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccattgggtttgtgccac 2958763  T
Q  680 gtca 683  Q
    ||||    
T  2958764 gtca 2958767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 2967133 - 2967236
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  ||||||||  ||||||||||||||||||| |||||  ||||| |||||    
T  2967133 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccattgggtttgtgccac 2967232  T
Q  680 gtca 683  Q
    ||||    
T  2967233 gtca 2967236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 29974763 - 29974866
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  ||||||||  ||||||||||||||||||| |||||  ||||| |||||    
T  29974763 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccattgggtttgtgccac 29974862  T
Q  680 gtca 683  Q
    ||||    
T  29974863 gtca 29974866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 29981266 - 29981369
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  ||||||||  ||||||||||||||||||| |||||  ||||| |||||    
T  29981266 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccattgggtttgtgccac 29981365  T
Q  680 gtca 683  Q
    ||||    
T  29981366 gtca 29981369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 30021879 - 30021776
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  ||||||||  ||||||||||||||||||| |||||  ||||| |||||    
T  30021879 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccattgggtttgtgccac 30021780  T
Q  680 gtca 683  Q
    ||||    
T  30021779 gtca 30021776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 40958318 - 40958256
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttag 410  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| ||||||||||||    
T  40958318 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttag 40958256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 12505486 - 12505389
Alignment:
Q  329 tgctagaatcatataatacaagatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| |||||| ||  |||||||||||||||||  | |||| | |||||||| ||||||||||||| | |||||||||| |  |||||||||||    
T  12505486 tgctagaaccatatattaatagatcaaaagattacatgtttagctaagatcaagtacctctaatcccaacaatggagatttagctactcattgtcatg 12505389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 42151340 - 42151417
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||  |||||||||||| |  |||||||||||    
T  42151340 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaatgaaggagatttagctactcattgtcatg 42151417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 776 - 808
Target Start/End: Original strand, 2439873 - 2439905
Alignment:
Q  776 gtgaattggtcttcctgcctcttgctcgccttt 808  Q
    |||||||||||||||||||||||||||||||||    
T  2439873 gtgaattggtcttcctgcctcttgctcgccttt 2439905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 584 - 724
Target Start/End: Original strand, 42151615 - 42151754
Alignment:
Q  584 ctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtca 683  Q
    |||||| |||||||||  |||||  || ||||||||||||||   |  || ||||| ||||||||||| ||| ||||||||||  ||||| |||||||||    
T  42151615 ctatttatagaattctgattctgtatccactcgcctcgcgagctccttcagtcgccatggcgagttgaggttccttcaccattgggtttgtgccacgtca 42151714  T
Q  684 cctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
     || ||| ||| |||  || |||| ||||||||||||||||    
T  42151715 tctgtgaagag-ttaaaccgccctcactcgcctcgcgagta 42151754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 29414370 - 29414292
Alignment:
Q  349 agatcaaaagattacat-tctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    ||||||||||||||||| | |||||| | |||||||| ||||||||||||| ||||| |||||| |  |||||||||||    
T  29414370 agatcaaaagattacatgtttaagctaagatcaagtacctctaatcccaacaaaggaaatttagctactcattgtcatg 29414292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 29981008 - 29981057
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  29981008 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 29981057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 34356961 - 34356912
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  34356961 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 34356912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 34358752 - 34358703
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  34358752 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 34358703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 152; Significance: 5e-80; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 301 - 560
Target Start/End: Original strand, 4591268 - 4591527
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  4591268 gcaagaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaa 4591367  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
     |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |  |||||||||||||||| || ||||||||||     
T  4591368 agagatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 4591467  T
Q  501 ctcactcaaacactagtgctctatgaaaacagaagaatttcgccctattctctctctaaa 560  Q
    | ||||||| ||||| ||| |  |  | ||||   | |||||||||||||||||||||||    
T  4591468 cacactcaatcactattgcccagtatacacagtgtattttcgccctattctctctctaaa 4591527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 312 - 515
Target Start/End: Complemental strand, 20949928 - 20949724
Alignment:
Q  312 ttcaatatcatgtaagttgctagaatcatataatacaa-gatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaaggagatttag 410  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20949928 ttcaatatcatgtaaattgctagaatcatataatacaaagatcaaaagattacattctaagctcaatcaagtacctctaatcccaactaaggagatttag 20949829  T
Q  411 ttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaattctcactcaaa 510  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||||| |||||||||| |||||||||||||||| || |||||||||| | |||||||     
T  20949828 ttcatcattgtcatgagaactttacaaaagtggaatgaaagttgagactccatgccaagaacttgatttctccaagaatcttgatgaatccacactcaat 20949729  T
Q  511 cacta 515  Q
    |||||    
T  20949728 cacta 20949724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 301 - 564
Target Start/End: Complemental strand, 4644211 - 4643948
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| ||||||||||||||| |||||||||||||||| |  ||||||||||| ||||||| | | || ||||||||| ||||||||||||| ||    
T  4644211 gcaagaataacttcaatatcatgtaaattgctagaatcatatattgaaagatcaaaagtttacattatcaacttaatcaagtacctctaatcccaacaaa 4644112  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||| |||| ||||  ||||||||||| |||||||||||||||| || ||||| ||||     
T  4644111 ggagattttgttcatcactgtcatgagaacattacaaaagtggaaagaaatttgaagatccatgccaagaacttgatttctccaagaatcttgacgaatc 4644012  T
Q  501 ctcactcaaacactagtgctctatgaaaacagaagaatttcgccctattctctctctaaaaatg 564  Q
    | ||||||||||    | ||||||||||||| ||||||||| |||||||||| ||||| |||||    
T  4644011 cacactcaaacatcctttctctatgaaaacataagaatttcaccctattctccctctataaatg 4643948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 582 - 749
Target Start/End: Original strand, 43932358 - 43932525
Alignment:
Q  582 ggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgt 681  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  43932358 ggctatttatagaattcttgatctgcatcaactcgcctcgcgagtaactccattcgccatggcgagttgatgtttcttcaccattaagtttgagccacgt 43932457  T
Q  682 cacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcccttgggagttgct 749  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||| ||||||||| ||| ||||||||    
T  43932458 cacctctaaggagtttaggccgccctaactcgcctcacgagtaatttcactcgccattgcgagttgct 43932525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 571 - 749
Target Start/End: Complemental strand, 10940753 - 10940575
Alignment:
Q  571 atgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagt 670  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||| | ||||||| ||||||||||| ||||||||||||||||||    
T  10940753 atgattaaatgggctatttatagaattcttgatctgcatcaactcgcctcgcgagtaactctattcgccatggcgagttgatgtttcttcaccattaagt 10940654  T
Q  671 ttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcccttgggagttgct 749  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||||| ||| |||  ||||||||| ||| ||||||||    
T  10940653 ttgagccacgtcgcctttgaggagtttaggccgccctaactcgcctcacgattaaattcactcgccattgcgagttgct 10940575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 301 - 482
Target Start/End: Original strand, 25692453 - 25692635
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataat-acaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaacta 399  Q
    ||||||||||  |||||||| ||||| |||||||||||||||| | | |||||||||||||||||||||||| |  |||||||| |||||||||||||||    
T  25692453 gcaagaataaactcaatatcttgtaaattgctagaatcatatattcaaaagatcaaaagattacattctaagtttgatcaagtacctctaatcccaacta 25692552  T
Q  400 aggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctc 482  Q
    || |||||||||| ||||||||||||  ||||||||||||||||||| |||| |||  |||||||| || | |||||||||||    
T  25692553 agaagatttagttgatcattgtcatgataacattacaaaagtggaagaaaagatgaagatccatgctaagagcttgatttctc 25692635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 580 - 725
Target Start/End: Original strand, 43995855 - 43996000
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| ||| |||| |||||||| | |||||||||||||||||||  || ||||  ||||||||||| ||| |||||||| |  |||||||||||    
T  43995855 tgggctatttataggattcatgttctgcattaactcgcctcgcgagtaacttcactcgcaatggcgagttgaggttacttcaccagtgggtttgagccac 43995954  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaa 725  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||    
T  43995955 gtcacctttgaggagtttagaccgccctaactcgcctcgcgagtaa 43996000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 580 - 749
Target Start/End: Original strand, 47441617 - 47441786
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||| |||||||| |||||||||||||||||||||  |||||||  ||||||||||| ||| |||||||| |  |||||||||||    
T  47441617 tgggctatttatagaattcatgttctgcatcaactcgcctcgcgagtaacttcattcgcaatggcgagttgaggttacttcaccactgggtttgagccac 47441716  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcccttgggagttgct 749  Q
    |||| || |||||| |||||| | ||||||||||||| | ||||||   |||||||| ||| ||||||||    
T  47441717 gtcatctttgaggaatttaggtcgccctaactcgccttgtgagtaaatgcactcgccattgcgagttgct 47441786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 303 - 437
Target Start/End: Original strand, 17735818 - 17735952
Alignment:
Q  303 aagaataatttcaatatcatgtaagttgctagaatcatataataca-agatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaag 401  Q
    ||||||||  |||||||||  ||| |||||||||||||||| |  | | ||||||||||||||| |||||||  |||||||| ||||||||||||| |||    
T  17735818 aagaataaactcaatatcacataaattgctagaatcatatatttgagatatcaaaagattacat-ctaagcttgatcaagtacctctaatcccaacaaag 17735916  T
Q  402 gagatttagttcatcattgtcatgtgaacattacaa 437  Q
    ||||||||||| |||||||||||| |||||||||||    
T  17735917 gagatttagttgatcattgtcatgagaacattacaa 17735952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 303 - 437
Target Start/End: Original strand, 19037087 - 19037221
Alignment:
Q  303 aagaataatttcaatatcatgtaagttgctagaatcatataataca-agatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaag 401  Q
    ||||||||  |||||||||  ||| |||||||||||||||| |  | | ||||||||||||||| |||||||  |||||||| ||||||||||||| |||    
T  19037087 aagaataaactcaatatcacataaattgctagaatcatatatttgagatatcaaaagattacat-ctaagcttgatcaagtacctctaatcccaacaaag 19037185  T
Q  402 gagatttagttcatcattgtcatgtgaacattacaa 437  Q
    ||||||||||| |||||||||||| |||||||||||    
T  19037186 gagatttagttgatcattgtcatgagaacattacaa 19037221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 328 - 445
Target Start/End: Original strand, 24705310 - 24705432
Alignment:
Q  328 ttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaac-----taaggagatttagttcatcattgtc 422  Q
    |||||||||||||||| |  |||||||||||||||||||||||||| ||||||||| || ||||||||||      |||||| ||||||| |||||||||    
T  24705310 ttgctagaatcatatattcaaagatcaaaagattacattctaagcttaatcaagtacctataatcccaacaaattaaaggaggtttagttgatcattgtc 24705409  T
Q  423 atgtgaacattacaaaagtggaa 445  Q
    |||  ||||||||| ||||||||    
T  24705410 atgataacattacagaagtggaa 24705432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 599 - 723
Target Start/End: Complemental strand, 20650481 - 20650357
Alignment:
Q  599 ttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtcacctctgaggagttta 698  Q
    ||||||||| ||||||||||||||||||| |  |||||||| || |||||||| ||| |||||| | |  ||||| | |||||||||||||||||| ||     
T  20650481 ttgttctgcatcaactcgcctcgcgagtagcttcattcgccatgccgagttgaggttacttcactagtgggtttgtgacacgtcacctctgaggagattt 20650382  T
Q  699 ggccaccctaactcgcctcgcgagt 723  Q
     ||| ||||||||||||||||||||    
T  20650381 agccgccctaactcgcctcgcgagt 20650357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 570 - 724
Target Start/End: Original strand, 2786492 - 2786645
Alignment:
Q  570 tatgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaag 669  Q
    |||||| ||||||| | ||| |||||||  ||||||  || |||||||||||| |||||   |||||||| ||||||||||| |||||||||||| |  |    
T  2786492 tatgatcaaatgggat-tttatagaatttctgttcttacttaactcgcctcgcaagtaaatgcattcgccatggcgagttgatgtttcttcaccagtggg 2786590  T
Q  670 tttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||  ||||||||| || ||||||||||  ||| |||||||||||||||| ||||    
T  2786591 tttctgccacgtcagctttgaggagttttagccgccctaactcgcctcgcaagta 2786645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 27501385 - 27501282
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   || |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  27501385 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcatcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 27501286  T
Q  680 gtca 683  Q
    ||||    
T  27501285 gtca 27501282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 461131 - 461055
Alignment:
Q  348 aagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||| |||||||  |||||||| ||||||||||| | ||| |||||||||| ||||||||||||    
T  461131 aagatcaaaagattacat-ctaagcttgatcaagtacctctaatcccagcaaagaagatttagttgatcattgtcatg 461055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 580 - 725
Target Start/End: Original strand, 32747161 - 32747305
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| || ||||||||||||||   |  |||||||| ||||||||||| ||| |||| |||||  ||||| |||||    
T  32747161 tgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcgccattgggtttgtgccac 32747260  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaa 725  Q
    |||| || ||| |||  ||  || ||||||||||||||||||||||    
T  32747261 gtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaa 32747305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 580 - 724
Target Start/End: Complemental strand, 4310897 - 4310754
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   ||||| |  ||||||||| ||||  ||  ||||||||| ||||||||||||||||||| |||||  ||||| |||||    
T  4310897 tgggctatttatagaattctgagtctgcatgcactcgcctcacgagctacttcattcgcct-ggcgagttgaagtttcttccccattgggtttgtgccac 4310799  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| |  |||| || |||  || |||||||||||||||||||||    
T  4310798 gtcagcagtgagaagcttaaaccgccctaactcgcctcgcgagta 4310754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 580 - 724
Target Start/End: Original strand, 23069281 - 23069425
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   ||||| |  |||||||| |||||  ||  |||||||| |||||||||||||||||||| |||||  |||||| |||     
T  23069281 tgggctatttatagaattctgagtctgcattcactcgccttgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggtttgaaccat 23069380  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| |  |||| || |||  || |||||||||||||||||||||    
T  23069381 gtcagcaatgagaagcttaaaccgccctaactcgcctcgcgagta 23069425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 25893747 - 25893824
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  25893747 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 25893824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 725
Target Start/End: Original strand, 25894019 - 25894163
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| || ||||||||||||||   |  |||||||| ||||||||||| ||| ||||  ||||  ||||| |||||    
T  25894019 tgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcttcattgggtttgtgccac 25894118  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaa 725  Q
    |||| || ||| |||  ||  || ||||||||||||||||||||||    
T  25894119 gtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaa 25894163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 27501668 - 27501591
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  27501668 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 27501591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 4311187 - 4311110
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  ||||||   |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  4311187 agatcaaaagattacatgttaagctaggatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 4311110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 6036787 - 6036864
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| |||||||||||||  ||||||||||| |  |||||||||||    
T  6036787 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacagaggagatttagctactcattgtcatg 6036864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 10941005 - 10940928
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| || ||||||||| |  |||||||||||    
T  10941005 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaatgagatttagctactcattgtcatg 10940928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 302 - 410
Target Start/End: Complemental strand, 20650873 - 20650764
Alignment:
Q  302 caagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaa 400  Q
    |||||||||| |||||||||  | |  ||||||||||||||| |   |||||||||||||||||  | |||| | |||||||| ||||||||| ||| ||    
T  20650873 caagaataatctcaatatcaaatcaaatgctagaatcatatatttatagatcaaaagattacatgtttagctaagatcaagtacctctaatcctaacaaa 20650774  T
Q  401 ggagatttag 410  Q
    ||||||||||    
T  20650773 ggagatttag 20650764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 24179595 - 24179672
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| | ||||||||||| |||||||||||| |  |||||||||||    
T  24179595 agatcaaaagattacatgttaagctaagatcaagtacccctaatcccaacaaaggagatttagctactcattgtcatg 24179672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 32746891 - 32746968
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||  |  |||||||||||    
T  32746891 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttaactactcattgtcatg 32746968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 43932098 - 43932175
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | || ||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  43932098 agatcaaaagattacatgttaagctaagattaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 43932175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 9569951 - 9569848
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||    |||||||||||||||   |  | |||||| |||||||||||||||||||| |||||  ||||| |||||    
T  9569951 tgggctatttatagaattctgattctgtactaactcgcctcgcgagctccttccttcgccatggcgagttgaagtttcttccccattgggtttgtgccac 9569852  T
Q  680 gtca 683  Q
    ||||    
T  9569851 gtca 9569848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 9570220 - 9570171
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  9570220 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 9570171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 9576722 - 9576673
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  9576722 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 9576673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 23068985 - 23069062
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  ||||||   |||||||| ||||||||||||| |||||||||||  |  |||||||||||    
T  23068985 agatcaaaagattacatgttaagctatgatcaagtacctctaatcccaacaaaggagatttatctactcattgtcatg 23069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 43995625 - 43995674
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  43995625 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 43995674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 47441350 - 47441399
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  47441350 atcaagtaactctaatcccaacaaaggagatttagctactcattgtcatg 47441399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 149; Significance: 3e-78; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 301 - 509
Target Start/End: Complemental strand, 21900937 - 21900730
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| ||||||||||||||| |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||    
T  21900937 gcaagaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagat-acattctaagctcaatcaagtacctctaatcccaactaa 21900839  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||| || ||||||||||     
T  21900838 ggagatttagttcatcattgtcatgagaacattacaaaagtggaatgaaagttgagaatccatgcaaagaacttgatttctccaagaatcttgatgaatc 21900739  T
Q  501 ctcactcaa 509  Q
    | |||||||    
T  21900738 cacactcaa 21900730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 301 - 515
Target Start/End: Complemental strand, 10830874 - 10830660
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    ||||||||||  |||||||||||||| |||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  10830874 gcaagaataacatcaatatcatgtaaattgctagaataatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaa 10830775  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |  |||||||||||||||| || ||||||||||     
T  10830774 ggagatttagttcatcattgtcatgagaacattacaaaagtggaatgaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 10830675  T
Q  501 ctcactcaaacacta 515  Q
    | ||||||| |||||    
T  10830674 cacactcaatcacta 10830660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 301 - 515
Target Start/End: Complemental strand, 11024666 - 11024452
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    ||||||||||  |||||||||||||| |||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  11024666 gcaagaataacatcaatatcatgtaaattgctagaataatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaa 11024567  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |  |||||||||||||||| || ||||||||||     
T  11024566 ggagatttagttcatcattgtcatgagaacattacaaaagtggaatgaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 11024467  T
Q  501 ctcactcaaacacta 515  Q
    | ||||||| |||||    
T  11024466 cacactcaatcacta 11024452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 301 - 451
Target Start/End: Complemental strand, 8881161 - 8881011
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataat-acaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaacta 399  Q
    ||||||||||  |||||||||  |||  |||||||||||| || | | ||||||||||||||||||| ||||||  |||||||| ||||||||||||| |    
T  8881161 gcaagaataaactcaatatcacataaaatgctagaatcatttatttaaaagatcaaaagattacatt-taagcttgatcaagtacctctaatcccaacaa 8881063  T
Q  400 aggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaag 451  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||| ||||    
T  8881062 aggagatttagttgatcattgtcatgataacattacaaaagtggaagaaaag 8881011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 580 - 724
Target Start/End: Original strand, 19090587 - 19090730
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| | |||||||||||||||   |  |||||||| ||||||||||| ||| ||||||||||  ||||| |||||    
T  19090587 tgggctatttatagaattctgattctgcatgaactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccac 19090686  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| || ||| ||| |||| |  |||||||||||||||| ||||    
T  19090687 gtcatctgtgaagag-ttagactgccctaactcgcctcgcaagta 19090730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 632 - 768
Target Start/End: Complemental strand, 33850018 - 33849882
Alignment:
Q  632 cattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcac 731  Q
    ||||| || ||||||||| ||||| |||||||| |  ||||| |||||||||  | |||||||| |||||| |||||||||||||||||||||    |||    
T  33850018 cattctccatggcgagtttaagttccttcaccagtgggtttgtgccacgtcatttgtgaggagtctaggccgccctaactcgcctcgcgagtacatgcac 33849919  T
Q  732 tcgcccttgggagttgcttgttagcctttgcgagttg 768  Q
    ||||| | | |||||||||||| |||  |||||||||    
T  33849918 tcgccatggcgagttgcttgttcgccactgcgagttg 33849882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 724
Target Start/End: Original strand, 15915410 - 15915562
Alignment:
Q  571 atgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagt 670  Q
    |||||| | |||||||||| |||||||||   ||||| |||||||||||||| ||   |  |||||||| ||||||||||| ||| ||||||||||  ||    
T  15915410 atgattgagtgggctatttatagaattctgactctgcatcaactcgcctcgcaagctccttcattcgccatggcgagttgaggttccttcaccattgggt 15915509  T
Q  671 ttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    ||| |||| |||| || ||| ||| |||  || |||||||||||||||||||||    
T  15915510 ttgtgccatgtcatctgtgaagag-ttaaaccgccctaactcgcctcgcgagta 15915562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 724
Target Start/End: Complemental strand, 22853654 - 22853502
Alignment:
Q  571 atgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagt 670  Q
    |||||| |||| ||||||| || |||| |  |||||| |||||||||||||||||   |  ||||||||  ||||||| |||||| ||||||||||  ||    
T  22853654 atgattgaatgagctatttataaaattttaattctgcatcaactcgcctcgcgagctccttcattcgccagggcgagt-gaagttccttcaccattgggt 22853556  T
Q  671 ttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    ||| ||||||||| || |||| ||  || ||| |||||||||||||||||||||    
T  22853555 ttgtgccacgtcagctgtgagaagcctaagccgccctaactcgcctcgcgagta 22853502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 580 - 724
Target Start/End: Original strand, 15949940 - 15950083
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   ||| | |||||||||||||||||   |  |||||||| ||||||||||| ||| ||||||||||  ||||| |||||    
T  15949940 tgggctatttatagaattctgactctacatcaactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccac 15950039  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
     ||| || ||| ||| |||  || |||||||||||||||||||||    
T  15950040 atcatctatgaagag-ttaaaccgccctaactcgcctcgcgagta 15950083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 1379751 - 1379854
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  1379751 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 1379850  T
Q  680 gtca 683  Q
    ||||    
T  1379851 gtca 1379854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 2447452 - 2447555
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  2447452 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 2447551  T
Q  680 gtca 683  Q
    ||||    
T  2447552 gtca 2447555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 5049330 - 5049227
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  5049330 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 5049231  T
Q  680 gtca 683  Q
    ||||    
T  5049230 gtca 5049227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 6796242 - 6796345
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  6796242 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 6796341  T
Q  680 gtca 683  Q
    ||||    
T  6796342 gtca 6796345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 48346512 - 48346409
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  48346512 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 48346413  T
Q  680 gtca 683  Q
    ||||    
T  48346412 gtca 48346409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 48352896 - 48352793
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  48352896 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 48352797  T
Q  680 gtca 683  Q
    ||||    
T  48352796 gtca 48352793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 6020565 - 6020488
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  6020565 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 6020488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 8185093 - 8185016
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  8185093 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 8185016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 8192653 - 8192576
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  8192653 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 8192576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 329 - 425
Target Start/End: Original strand, 14288216 - 14288313
Alignment:
Q  329 tgctagaatcatataatacaagatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    ||||||||||||||| |   |||||||| ||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  14288216 tgctagaatcatatatttatagatcaaaggattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 14288313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 22853907 - 22853830
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  22853907 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 22853830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 23612910 - 23612987
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  23612910 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 23612987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 26602433 - 26602510
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  26602433 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 26602510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 33850364 - 33850267
Alignment:
Q  329 tgctagaatcatataatacaagatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| |||||| | | |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||  |  |||||||||||    
T  33850364 tgctagaaccatatatttctagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttatctactcattgtcatg 33850267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 571 - 724
Target Start/End: Original strand, 39433681 - 39433833
Alignment:
Q  571 atgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagt 670  Q
    |||||| |||| ||||| | |||| ||||  |||||  |||||||||||||||||   |  ||||||||  |||||||  ||||| ||||||||||| ||    
T  39433681 atgattgaatgagctatatatagacttctaattctgtatcaactcgcctcgcgagctccttcattcgccaaggcgagta-aagttccttcaccattaggt 39433779  T
Q  671 ttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    ||| ||||||||| || |||| ||  || ||| |||||||||||||||||||||    
T  39433780 ttgtgccacgtcagctgtgagaagcctaagccgccctaactcgcctcgcgagta 39433833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 48353181 - 48353104
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  48353181 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 48353104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 736
Target Start/End: Complemental strand, 9642345 - 9642190
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| || ||||||||||||||   |  ||||||||  |||||||||| ||| |||| |||||  ||||| |||||    
T  9642345 tgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccagggcgagttgaggttccttcgccattgggtttgtgccac 9642246  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcc 736  Q
    |||| || ||| |||  ||  || ||||||||||||||| |||||| |||| |||||    
T  9642245 gtcagctgtga-gaggctaaaccgccctaactcgcctcgtgagtaaaatcattcgcc 9642190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 8141878 - 8141775
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  || ||||| |||||||||||||||||||| |||||  ||||| |||||    
T  8141878 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcaatcgccatggcgagttgaagtttcttccccattgggtttgtgccac 8141779  T
Q  680 gtca 683  Q
    ||||    
T  8141778 gtca 8141775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 1948334 - 1948272
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttag 410  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| ||||||||||||    
T  1948334 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttag 1948272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 571 - 724
Target Start/End: Original strand, 37026499 - 37026652
Alignment:
Q  571 atgattaaatgggctatttttagaa-ttcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaag 669  Q
    |||||| |||| ||||||| ||||| ||||  |||||  |||||||||||||||||   |  ||||||||  ||||||| | |||| ||||||||||  |    
T  37026499 atgattgaatgagctatttatagaaattctaattctgtatcaactcgcctcgcgagctccttcattcgccagggcgagt-gcagttccttcaccattggg 37026597  T
Q  670 tttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| ||||||||| || |||| ||  || ||| |||||||||||||||||||||    
T  37026598 tttgtgccacgtcagctgtgagaagcctaagccgccctaactcgcctcgcgagta 37026652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 571 - 629
Target Start/End: Original strand, 45434359 - 45434417
Alignment:
Q  571 atgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaac 629  Q
    ||||||||| ||||||||| ||||||||||  ||||| | |||||||||||||||||||    
T  45434359 atgattaaaagggctatttatagaattcttaatctgcataaactcgcctcgcgagtaac 45434417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 48346797 - 48346735
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttag 410  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| ||||||||||||    
T  48346797 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttag 48346735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 9642637 - 9642540
Alignment:
Q  329 tgctagaatcatataatacaagatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||   |||||||||||||||||  ||| ||   |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  9642637 tgctagaaccatataattatagatcaaaagattacatgttaaactatgatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 9642540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 425
Target Start/End: Original strand, 14299401 - 14299498
Alignment:
Q  329 tgctagaatcatataatacaagatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    ||||||||||||||| |   |||||||| ||||||||  |||||| | |||||||| ||||||||| ||| |||||||||||| |  |||||||||||    
T  14299401 tgctagaatcatatatttatagatcaaaggattacatgttaagctaagatcaagtacctctaatcctaacaaaggagatttagctactcattgtcatg 14299498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 15915158 - 15915235
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||| ||| |  |||||||||||    
T  15915158 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatctagctactcattgtcatg 15915235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 15949679 - 15949756
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||| ||| |  |||||||||||    
T  15949679 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatctagctactcattgtcatg 15949756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 21643039 - 21643116
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||| ||||| |||||||||||| |  |||||||||||    
T  21643039 agatcaaaagattacatgttaagctaagatcaagtacctctaatgccaacaaaggagatttagctactcattgtcatg 21643116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 3923525 - 3923422
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| || ||||||||||||||   |  |||||||| ||||||||| | ||| |||| |||||  ||||| |||||    
T  3923525 tgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttaaggttccttcgccattgggtttgtgccac 3923426  T
Q  680 gtca 683  Q
    ||||    
T  3923425 gtca 3923422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 19090329 - 19090407
Alignment:
Q  349 agatcaaaagattacat-tctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    ||||||||||||||||| | |||||| | |||||||| ||||||||||||| || ||||||||| |  |||||||||||    
T  19090329 agatcaaaagattacatgtttaagctaagatcaagtacctctaatcccaacaaaagagatttagctactcattgtcatg 19090407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 1379496 - 1379545
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  1379496 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 1379545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 2447195 - 2447244
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  2447195 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 2447244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 3923794 - 3923717
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||  |||||| | |||||||| ||||||||||||| |||| ||||||| |  |||||||||||    
T  3923794 agatcaaaggattacatgttaagctaagatcaagtacctctaatcccaacaaaggtgatttagctactcattgtcatg 3923717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 5049585 - 5049536
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  5049585 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 5049536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 6795987 - 6796036
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  6795987 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 6796036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 8142117 - 8142068
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  8142117 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 8142068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 36876066 - 36876143
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  ||||||   |||||||| ||||||||||||| || ||||||||| |  |||||||||||    
T  36876066 agatcaaaagattacatgttaagctatgatcaagtacctctaatcccaacaaaagagatttagctactcattgtcatg 36876143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 39433428 - 39433505
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||| ||| || ||||||||| |  |||||||||||    
T  39433428 agatcaaaagattacatgttaagctaagatcaagtacctctaatcctaacaaaagagatttagctactcattgtcatg 39433505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 1e-74; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 301 - 555
Target Start/End: Complemental strand, 10081311 - 10081058
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    |||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||| || |||||||||||||    
T  10081311 gcaagaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctttaatcccaactaa 10081212  T
Q  401 ggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaatt 500  Q
     |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |  ||||| |||||| ||| || ||||||||||     
T  10081211 agagatttatttcatcattgtcatgagaacattacaaaagtggaaggaaagttgagaatccatgcaaggaactttatttcttcaagaatcttgatgaatc 10081112  T
Q  501 ctcactcaaacactagtgctctatgaaaacagaagaatttcgccctattctctct 555  Q
    | ||||||| ||||| ||| | ||| ||||||  | ||||||||| |||||||||    
T  10081111 cacactcaatcactattgcccaatgtaaacag-tgtatttcgcccaattctctct 10081058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 9847006 - 9847256
Alignment:
Q  313 tcaatatcatgtaagttgctagaatcatataata-caagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaaggagatttagt 411  Q
    |||||||||||||| |||||||||||||||| |  |||||||||||||||||||||| | || ||||||||| |||||||||||||||||||||||||||    
T  9847006 tcaatatcatgtaaattgctagaatcatatatttgcaagatcaaaagattacattctgaacttaatcaagtacctctaatcccaactaaggagatttagt 9847105  T
Q  412 tcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaa-cttgatgaattctcactcaaa 510  Q
    |||||||||||||| ||||||||||||||||||||||||| |||  |||||||| || |   |||||||| ||||||| |||||||||| | ||||||      
T  9847106 tcatcattgtcatgagaacattacaaaagtggaaggaaagatgaagatccatgctaagagaatgatttct-caacaaatcttgatgaatccacactcact 9847204  T
Q  511 cactagtgctctatgaaaacagaagaatttcgccctattctctctctaaaaa 562  Q
    ||||  |||||||||||||||| | |||||||||||||||||||||| ||||    
T  9847205 cactcttgctctatgaaaacagtaaaatttcgccctattctctctctgaaaa 9847256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 312 - 482
Target Start/End: Original strand, 11016572 - 11016742
Alignment:
Q  312 ttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaaggagatttagt 411  Q
    ||||||||||||||| |||||||||||||||| |  ||||||||||||||||||||||||||  ||||| || ||||||||||||| |||||||||||||    
T  11016572 ttcaatatcatgtaaattgctagaatcatatattgaaagatcaaaagattacattctaagcttgatcaaatacctctaatcccaacaaaggagatttagt 11016671  T
Q  412 tcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctc 482  Q
    | ||||||||| ||  ||||||||||||||||||   ||| |||| |||||||||||||  ||||||||||    
T  11016672 tgatcattgtcgtgataacattacaaaagtggaatacaagatgaggatccatgccaatagattgatttctc 11016742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 609 - 725
Target Start/End: Complemental strand, 1166890 - 1166774
Alignment:
Q  609 tcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtcacctctgaggagtttaggccacccta 708  Q
    ||||||||||||||||||| |  ||||| |||||||||||||| |||||||||||| |  ||||| | |||||||||||||||||||||  ||| |||||    
T  1166890 tcaactcgcctcgcgagtagcttcattcaccttggcgagttgaggtttcttcaccagtgggtttgtgacacgtcacctctgaggagttttagccgcccta 1166791  T
Q  709 actcgcctcgcgagtaa 725  Q
    |||||||||||||||||    
T  1166790 actcgcctcgcgagtaa 1166774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 580 - 724
Target Start/End: Complemental strand, 9864191 - 9864047
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| || ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  9864191 tgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 9864092  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| |  |||| || |||  || |||||||||||||||||||||    
T  9864091 gtcagcagtgagaagcttaaaccgccctaactcgcctcgcgagta 9864047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 571 - 683
Target Start/End: Complemental strand, 7061942 - 7061830
Alignment:
Q  571 atgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagt 670  Q
    |||||| | |||||||||| |||||||||   ||||| |||||||||||||||||  ||  |||||||| |||||||||||||||||||| |||||  ||    
T  7061942 atgattgagtgggctatttatagaattctgactctgcatcaactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggt 7061843  T
Q  671 ttgagccacgtca 683  Q
    ||| |||||||||    
T  7061842 ttgtgccacgtca 7061830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 571 - 683
Target Start/End: Complemental strand, 7069128 - 7069016
Alignment:
Q  571 atgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagt 670  Q
    |||||| | |||||||||| |||||||||   ||||| |||||||||||||||||  ||  |||||||| |||||||||||||||||||| |||||  ||    
T  7069128 atgattgagtgggctatttatagaattctgactctgcatcaactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggt 7069029  T
Q  671 ttgagccacgtca 683  Q
    ||| |||||||||    
T  7069028 ttgtgccacgtca 7069016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 301 - 425
Target Start/End: Original strand, 22870713 - 22870837
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    ||||||||||| |||| ||||  |||   |||||||||||||| || | |||||||| ||||||| ||| |||  |||||||| ||||||||||||| ||    
T  22870713 gcaagaataatctcaaaatcacataaagagctagaatcatatattaaaggatcaaaatattacatactacgcttgatcaagtacctctaatcccaacaaa 22870812  T
Q  401 ggagatttagttcatcattgtcatg 425  Q
    |||||||||| | |||||| |||||    
T  22870813 ggagatttagctaatcattctcatg 22870837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 31128717 - 31128614
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   ||||| |||||||||||||||||  ||  | |||||| |||||||||||||||||||| |||||  ||||| |||||    
T  31128717 tgggctatttatagaattctgactctgcatcaactcgcctcgcgagctacttccttcgccatggcgagttgaagtttcttccccattgggtttgtgccac 31128618  T
Q  680 gtca 683  Q
    ||||    
T  31128617 gtca 31128614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 583 - 724
Target Start/End: Complemental strand, 13671241 - 13671100
Alignment:
Q  583 gctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtc 682  Q
    ||||||| |||||||||   ||||| || ||||||||| ||||   |  |||||| | ||||||||||||||| ||||||||||  ||||| ||||||||    
T  13671241 gctatttatagaattctaaatctgcatccactcgcctcccgagctccttcattcgtcatggcgagttgaagttccttcaccattgggtttgtgccacgtc 13671142  T
Q  683 acctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    | | ||||| || |||  || |||||||||||||||||||||    
T  13671141 atcactgagaagcttaaaccgccctaactcgcctcgcgagta 13671100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 1427841 - 1427738
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  1427841 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 1427742  T
Q  680 gtca 683  Q
    ||||    
T  1427741 gtca 1427738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 4019653 - 4019550
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  4019653 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 4019554  T
Q  680 gtca 683  Q
    ||||    
T  4019553 gtca 4019550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 4026079 - 4025976
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  4026079 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 4025980  T
Q  680 gtca 683  Q
    ||||    
T  4025979 gtca 4025976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 4717958 - 4717855
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  4717958 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 4717859  T
Q  680 gtca 683  Q
    ||||    
T  4717858 gtca 4717855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 4019936 - 4019859
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  4019936 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 4019859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 4026362 - 4026285
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  4026362 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 4026285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 7062217 - 7062140
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  7062217 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 7062140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 7069403 - 7069326
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  7069403 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 7069326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 571 - 724
Target Start/End: Original strand, 27670825 - 27670977
Alignment:
Q  571 atgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagt 670  Q
    |||||| |||| ||||||| |||||||||  |||||| |||| ||| ||||||||   |  ||||||||  ||||||| |||||| ||||||||||  ||    
T  27670825 atgattgaatgagctatttatagaattctaattctgcatcaaatcgtctcgcgagctccttcattcgccagggcgagt-gaagttccttcaccattgggt 27670923  T
Q  671 ttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    ||| ||||||||| |  |||| ||  || ||| |||||||||||||||||||||    
T  27670924 ttgtgccacgtcagccgtgagaagcctaagccgccctaactcgcctcgcgagta 27670977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 34655772 - 34655849
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  34655772 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 34655849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 736
Target Start/End: Original strand, 4187489 - 4187644
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  ||||| |  |||||||||||||||   |  ||||| || ||||||||||||||| |||| |||||  ||||| |||||    
T  4187489 tgggctatttatagaattctgattctgtcctaactcgcctcgcgagctccttcattcaccatggcgagttgaagttccttcgccattgggtttgtgccac 4187588  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcc 736  Q
    |||| || ||| |||  ||  || |||||||||||||||||||| ||  ||||||||    
T  4187589 gtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtcattccactcgcc 4187644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 351 - 425
Target Start/End: Original strand, 31548418 - 31548493
Alignment:
Q  351 atcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  31548418 atcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 31548493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 34649604 - 34649707
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| ||| |||||||||||||||| |||||  ||||| |||||    
T  34649604 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggtgagttgaagtttcttccccattgggtttgtgccac 34649703  T
Q  680 gtca 683  Q
    ||||    
T  34649704 gtca 34649707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 34656055 - 34656158
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||  |||||  ||||| |||||    
T  34656055 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttctttcccattgggtttgtgccac 34656154  T
Q  680 gtca 683  Q
    ||||    
T  34656155 gtca 34656158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 9864461 - 9864384
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||  |  |||||||||||    
T  9864461 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttatctactcattgtcatg 9864384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 571 - 724
Target Start/End: Complemental strand, 21262011 - 21261858
Alignment:
Q  571 atgattaaatgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagt 670  Q
    |||||| |||||||||||| |||| ||||   ||||  || || |||||||||||   |  |||||||| ||||||  ||||||| ||||||||||  ||    
T  21262011 atgattgaatgggctatttatagatttctaaatctgtatccacccgcctcgcgagctccttcattcgccatggcgaaatgaagttccttcaccattgggt 21261912  T
Q  671 ttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    ||  ||||||||| |  |||| ||||||  || |||||||||||||||||||||    
T  21261911 ttatgccacgtcatcagtgagaagtttaaaccgccctaactcgcctcgcgagta 21261858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 425
Target Start/End: Original strand, 29907360 - 29907457
Alignment:
Q  329 tgctagaatcatataatacaagatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    ||||||||||||||| |   |||||||||||||||||  ||||||   |||||||| ||||||||||||| |||||||||||  |  |||||||||||    
T  29907360 tgctagaatcatatatttatagatcaaaagattacatgttaagctaggatcaagtacctctaatcccaacaaaggagatttaactactcattgtcatg 29907457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 34649321 - 34649398
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||| ||| |||||||||||| |  |||||||||||    
T  34649321 agatcaaaagattacatgttaagctaagatcaagtacctctaatcctaacaaaggagatttagctactcattgtcatg 34649398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 21262275 - 21262212
Alignment:
Q  349 agatcaaaagattacat-tctaagctca-atcaagtatctctaatcccaactaaggagatttag 410  Q
    ||||||||||||||||| | |||||| | |||||||| ||||||||||||| ||||||||||||    
T  21262275 agatcaaaagattacatgtttaagctaagatcaagtacctctaatcccaacaaaggagatttag 21262212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 27670615 - 27670677
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttag 410  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||| ||| ||||||||||||    
T  27670615 agatcaaaagattacatgttaagctaagatcaagtacctctaatccgaacaaaggagatttag 27670677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 1428096 - 1428047
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  1428096 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 1428047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 4718213 - 4718164
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  4718213 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 4718164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 31128963 - 31128914
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  31128963 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 31128914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 1e-71; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 301 - 561
Target Start/End: Complemental strand, 13003556 - 13003295
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatc-aaaagattacattctaagctcaatcaagtatctctaatcccaacta 399  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| |||||||||||||||    
T  13003556 gcaagaataacttcaatatcatgtaaattgctagaatcatatattacaagatttaaaagattacattctaagctcaatcaagtacctctaatcccaacta 13003457  T
Q  400 aggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctccaacaaacttgatgaat 499  Q
    |||||||||||||||||||||||||| ||||||||||||| | | ||||||||||||||| ||||| |  |||||||||||||||| |  ||||||||||    
T  13003456 aggagatttagttcatcattgtcatgagaacattacaaaacttgcaggaaagttgagaatacatgcaaggaacttgatttctccaagattcttgatgaat 13003357  T
Q  500 tctcactcaaacactagtgctctatgaaaacagaagaatttcgccctattctctctctaaaa 561  Q
       ||||||| ||||| ||| | ||  ||||||   | ||||||||||||||||||||||||    
T  13003356 ctacactcaatcactattgcccaatataaacagtgtattttcgccctattctctctctaaaa 13003295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 582 - 811
Target Start/End: Complemental strand, 36754233 - 36754005
Alignment:
Q  582 ggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgt 681  Q
    |||||||| |||||||| |||||||||||||||||||||| |||||||  |||||||| ||||||||||| ||| |||||||| |  ||||| |||||||    
T  36754233 ggctatttatagaattcctgttctgcctcaactcgcctcgtgagtaacttcattcgccatggcgagttgaggttacttcaccagtgggtttgtgccacgt 36754134  T
Q  682 cacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcccttgggagttgcttgttagcctttgcgagttgatggtgtgtgaat 781  Q
    |||||||||||||| || ||| | ||||||||||||| | |||||||||||||||  || ||| |||| ||| ||| |||||||||||||| | || |||    
T  36754133 cacctctgaggagtata-gccgctctaactcgcctcgtgggtaatatcactcgccactgcgagctgctggttcgccattgcgagttgatggcgagtaaat 36754035  T
Q  782 tggtcttcctgcctcttgctcgcctttgct 811  Q
     ||||||||||||||||| |||||||||||    
T  36754034 aggtcttcctgcctcttgttcgcctttgct 36754005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 603 - 725
Target Start/End: Complemental strand, 5659939 - 5659817
Alignment:
Q  603 tctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtcacctctgaggagtttaggcc 702  Q
    ||||| |||||||||||||||||||||  |||| ||||||||||||| | ||| |||||||| || ||||| |||||||||| | |||||||||| ||||    
T  5659939 tctgcatcaactcgcctcgcgagtaacttcatttgccttggcgagttaaggttccttcaccagtaggtttgtgccacgtcacttttgaggagttttggcc 5659840  T
Q  703 accctaactcgcctcgcgagtaa 725  Q
    |||||||||||||||||||||||    
T  5659839 accctaactcgcctcgcgagtaa 5659817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 301 - 482
Target Start/End: Complemental strand, 52182917 - 52182735
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagc-tcaatcaagtatctctaatcccaacta 399  Q
    ||||||||||  | |||||||| ||| || ||||||||||||| |  | ||||||||||||||||||||||| | ||||||||| ||||||||||||| |    
T  52182917 gcaagaataaacttaatatcatctaaattactagaatcatatattcaaggatcaaaagattacattctaagccttaatcaagtacctctaatcccaacaa 52182818  T
Q  400 aggagatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaataacttgatttctc 482  Q
    ||||||||||||| ||||||||||||  ||||||||||   |||||| || | |||  || |||||||| | |||||||||||    
T  52182817 aggagatttagttgatcattgtcatgataacattacaatcatggaagaaatggtgaagattcatgccaagatcttgatttctc 52182735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 603 - 715
Target Start/End: Complemental strand, 30210953 - 30210841
Alignment:
Q  603 tctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtcacctctgaggagtttaggcc 702  Q
    ||||| ||||||||||||||||||  |  |||||||| ||||||||| ||||| |||||||| || ||||| ||||||||| || |||||||| ||||||    
T  30210953 tctgcttcaactcgcctcgcgagttccttcattcgccatggcgagtttaagttccttcaccagtaggtttgtgccacgtcatctgtgaggagtctaggcc 30210854  T
Q  703 accctaactcgcc 715  Q
     ||||||||||||    
T  30210853 gccctaactcgcc 30210841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 580 - 736
Target Start/End: Original strand, 8104673 - 8104828
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| || ||||||||||||||   |  |||||||| ||||||||||| ||| |||| |||||  ||||| |||||    
T  8104673 tgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcgccattgggtttgtgccac 8104772  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcc 736  Q
    |||| || ||| |||  ||  || |||||||||||||||||||||| |||| |||||    
T  8104773 gtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaaatcattcgcc 8104828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 580 - 736
Target Start/End: Original strand, 13594900 - 13595055
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| || ||||||||||||||   |  |||||||| ||||||||||| ||| |||| |||||  ||||| |||||    
T  13594900 tgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcgccattgggtttgtgccac 13594999  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcc 736  Q
    |||| || ||| |||  ||  || |||||||||||||||||||||| |||| |||||    
T  13595000 gtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaaatcattcgcc 13595055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 580 - 724
Target Start/End: Complemental strand, 37355765 - 37355621
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   ||||| |  ||||||||||||||  ||  |||||||| |||||||||||||||||||| |||||  ||||| ||||     
T  37355765 tgggctatttatagaattctgagtctgcattcactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccattgggtttgcgccat 37355666  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| |  |||| || |||  || |||||||||||||||||||||    
T  37355665 gtcagcaatgagaagcttaaaccgccctaactcgcctcgcgagta 37355621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 580 - 730
Target Start/End: Complemental strand, 55462202 - 55462053
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| || ||||||||||||||   |  |||||||| ||||||||||| ||| |||| |||||  ||||| |||||    
T  55462202 tgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcgccattgggtttgtgccac 55462103  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatca 730  Q
    |||| || ||| |||  ||  || |||||||||||||||||||||| ||||    
T  55462102 gtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaaatca 55462053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 410
Target Start/End: Complemental strand, 49359063 - 49358955
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctcaatcaagtatctctaatcccaactaa 400  Q
    ||||||||||| |||||||||  | |  ||||||||||||||| || ||||||||||||||||||  | ||||  |||||||| ||||||||||||| |     
T  49359063 gcaagaataatatcaatatcaaatcaaatgctagaatcatatatta-aagatcaaaagattacatgtttagcttgatcaagtacctctaatcccaacaat 49358965  T
Q  401 ggagatttag 410  Q
    ||||||||||    
T  49358964 ggagatttag 49358955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 41373790 - 41373893
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  41373790 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccgtggcgagttgaagtttcttccccattgggtttgtgccac 41373889  T
Q  680 gtca 683  Q
    ||||    
T  41373890 gtca 41373893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 8104402 - 8104479
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  8104402 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 8104479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 13594629 - 13594706
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  13594629 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 13594706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 583 - 724
Target Start/End: Original strand, 16406140 - 16406281
Alignment:
Q  583 gctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtc 682  Q
    ||||||| |||||||||   | ||| || ||||||||||||||   |  |||||||| ||||||||||||||| ||||||||||  ||||| ||||||||    
T  16406140 gctatttatagaattctaaatttgcatccactcgcctcgcgagcttcttcattcgccatggcgagttgaagttccttcaccattgggtttgtgccacgtc 16406239  T
Q  683 acctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    | |  |||| || |||  || ||||||||||||||| |||||    
T  16406240 atcagtgagaagcttaaaccgccctaactcgcctcgtgagta 16406281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 17457376 - 17457453
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  17457376 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 17457453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 27590826 - 27590903
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  27590826 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 27590903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 30238750 - 30238827
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  30238750 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 30238827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 37356050 - 37355973
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  37356050 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 37355973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 37368016 - 37367939
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  37368016 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 37367939  T

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Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 585 - 696
Target Start/End: Original strand, 7781122 - 7781233
Alignment:
Q  585 tatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacgtcac 684  Q
    ||||| |||||||||  |||||| |||||||||||| ||||   |  |||||||| ||||||||||| ||| ||||||||||  ||||| |||||||||     
T  7781122 tatttatagaattctgattctgcatcaactcgcctcacgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccacgtcat 7781221  T
Q  685 ctctgaggagtt 696  Q
    || ||| |||||    
T  7781222 ctgtgaagagtt 7781233  T

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Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 7780847 - 7780925
Alignment:
Q  349 agatcaaaagattacat-tctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    ||||||||||||||||| | |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  7780847 agatcaaaagattacatgtttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 7780925  T

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Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 425
Target Start/End: Complemental strand, 5660298 - 5660173
Alignment:
Q  301 gcaagaataatttcaatatcatgtaagttgctagaatcatataatacaagatcaaaagattacattctaagctca-atcaagtatctctaatcccaacta 399  Q
    ||||||||||| |||||||||  | |  |||||||| |||||| |   |||||||||||||||||  | |||| | |||||||| ||||||||||||| |    
T  5660298 gcaagaataatctcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgtttagctaagatcaagtacctctaatcccaacaa 5660199  T
Q  400 aggagatttagttcatcattgtcatg 425  Q
    ||||||||||  |  |||||||||||    
T  5660198 aggagatttaactactcattgtcatg 5660173  T

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Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 16405867 - 16405944
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||| ||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  16405867 agattaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 16405944  T

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Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 55462473 - 55462396
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||| ||| ||||||||||||| |||||||||||| |  |||||||||||    
T  55462473 agatcaaaagattacatgttaagctaagatcaggtacctctaatcccaacaaaggagatttagctactcattgtcatg 55462396  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 30211237 - 30211175
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttag 410  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||| ||| ||||||||||||    
T  30211237 agatcaaaagattacatgttaagctaagatcaagtacctctaatccaaacaaaggagatttag 30211175  T

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Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 41373536 - 41373585
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  41373536 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 41373585  T

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Target: scaffold0060 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 581 - 811
Target Start/End: Original strand, 15952 - 16182
Alignment:
Q  581 gggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccacg 680  Q
    ||||||||| ||||| | |||  |||| |||||||||||||||||   |  |||||||| ||||||||||||||| |||||||| |  ||||| ||||||    
T  15952 gggctatttatagaaattttgagctgcttcaactcgcctcgcgagctccttcattcgccatggcgagttgaagttccttcaccagtgggtttgtgccacg 16051  T
Q  681 tcacctctgaggagtttaggccaccctaactcgcctcgcgagtaatatcactcgcccttgggagttgcttgttagcctttgcgagttgatggtgtgtgaa 780  Q
    ||| || | |||||| |||||| |||||||||||||||||||||    |||||||| | | |||||||| ||| ||| |||||||||||||| | ||  |    
T  16052 tcatctgtaaggagtctaggccgccctaactcgcctcgcgagtacatgcactcgccatggcgagttgctcgtttgccgttgcgagttgatggcgagtaca 16151  T
Q  781 ttggtcttcctgcctcttgctcgcctttgct 811  Q
    |  | |||||||||||||||| |||||||||    
T  16152 taagccttcctgcctcttgctagcctttgct 16182  T

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Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 580 - 724
Target Start/End: Original strand, 71230 - 71373
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  |||||| |  ||||||||||||||   |  |||||||| ||||||||||| ||| ||||||||||  ||||| |||||    
T  71230 tgggctatttatagaattctgattctgcatgcactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccac 71329  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
    |||| || ||| ||| ||||  | | |||||||||||||||||||    
T  71330 gtcatctgtgaagag-ttagatcgcgctaactcgcctcgcgagta 71373  T

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Target: scaffold0053; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Original strand, 50494 - 50597
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  50494 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 50593  T
Q  680 gtca 683  Q
    ||||    
T  50594 gtca 50597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 50239 - 50288
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  50239 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 50288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 683
Target Start/End: Complemental strand, 4423 - 4320
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||   |||||||  ||||||||||||||   |  |||||||| |||||||||||||||||||| |||||  ||||| |||||    
T  4423 tgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccattgggtttgtgccac 4324  T
Q  680 gtca 683  Q
    ||||    
T  4323 gtca 4320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 4678 - 4629
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  4678 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 4629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 724
Target Start/End: Complemental strand, 8320 - 8177
Alignment:
Q  580 tgggctatttttagaattcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaagtttgagccac 679  Q
    |||||||||| |||||||||  ||| || |||| ||||||||||||   |  |||||||| ||||||||||| ||| ||||||||||  ||||| |||||    
T  8320 tgggctatttatagaattctgattcagcatcaaatcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgccac 8221  T
Q  680 gtcacctctgaggagtttaggccaccctaactcgcctcgcgagta 724  Q
     ||| || ||| ||| |||  || ||||||||| |||||||||||    
T  8220 atcatctgtgaagag-ttaaaccgccctaactcccctcgcgagta 8177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 8553 - 8504
Alignment:
Q  376 atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||| ||||||||||||| |||||||||||| |  |||||||||||    
T  8553 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 8504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 3166 - 3243
Alignment:
Q  349 agatcaaaagattacattctaagctca-atcaagtatctctaatcccaactaaggagatttagttcatcattgtcatg 425  Q
    |||||||||||||||||  |||||| | |||||||| ||||||||||||| |||||||||||  |  |||||||||||    
T  3166 agatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttaactactcattgtcatg 3243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 11834 - 11771
Alignment:
Q  349 agatcaaaagattacat-tctaagctca-atcaagtatctctaatcccaactaaggagatttag 410  Q
    ||||||||||||||||| | |||||| | |||||||| ||||||||||||| ||||||||||||    
T  11834 agatcaaaagattacatgtttaagctaagatcaagtacctctaatcccaacaaaggagatttag 11771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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