View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14494_low_43 (Length: 207)
Name: NF14494_low_43
Description: NF14494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14494_low_43 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 207
Target Start/End: Original strand, 46644982 - 46645162
Alignment:
| Q |
13 |
aatataagaaagaagcacgaacaaaacaaagattaaacacatgcactactttacaaagcaaatagtgtaaacaattaatcgcgaaatattgacagtatat |
112 |
Q |
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| T |
46644982 |
aatataagaaagaagcacgaacaaaacaaagattaaacacatgtactactttacaaagcaaatagtgtaaacaattaatcgcgaaatattgaaagtatat |
46645081 |
T |
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| Q |
113 |
ctacgttattatacatgacaaacatagcatagcatagcatagcataaacaagaacaggacgttgaagaagtaaagggtttgtgtagtgatgttaa |
207 |
Q |
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| T |
46645082 |
ctacgttatt----atgacaaa----------catagcatagcataaacaagaacaggacgttgaagaagtaaagggtttgtgtagtgatgttaa |
46645162 |
T |
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