View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14495_low_7 (Length: 478)
Name: NF14495_low_7
Description: NF14495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14495_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 373; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 12 - 460
Target Start/End: Original strand, 39300550 - 39300997
Alignment:
| Q |
12 |
tggtgggtatgttttgcatggagtatgacatgtggaataagaaacagtgattaatgacacgtgtgaatgttgtgaaattggatattgtgactcagcttat |
111 |
Q |
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| T |
39300550 |
tggtggatatgttttgcatggagtatgacatgtggaataagaaacagtgattaataacacgtgtgaatggtgtgaaattggatattgtgactcagcttat |
39300649 |
T |
|
| Q |
112 |
aataatgaaaattaaaatatagatggattaggatgattggatgagacgaggctggtttttcgtgtttaaagacacgtggaagattgaaggagtgcctcgt |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
39300650 |
aataatgaaaattaaaatatagatggattaggatgattggatgaaacgaggctggtttttcgtgtttaaagacacgtggaagattgaaggattgcctcgt |
39300749 |
T |
|
| Q |
212 |
atgagtttgtgcttggtagaaagaggtacactgcagatcaatggaagacacctggtctcaataaatgatttaacagtttattggtgattcaagaatattc |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39300750 |
atgagtttgtgcttggtagaaagaggtacactgcagatcaatggaagacacctggtctcaataaatgatttaacagtttattggtgattcaagaatattc |
39300849 |
T |
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| Q |
312 |
aattcgatcttccttttgttgtgggttatttttgaacaattatatttagactgtcattcattcaaatctcaagtttgaatctttagagtgtcaatgannn |
411 |
Q |
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|||||||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| |
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| T |
39300850 |
aattcgatcttcgttttgttgtggcttatttttgaacaattatatttagagtgtgattcattcaaatctcaagtttgaatctttagagtgtccctga-tt |
39300948 |
T |
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| Q |
412 |
nnnnnnattttgtgtggactaatccatacataattttgttttgcctttg |
460 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39300949 |
ttttttattttgtgtggactaatccatacataattttgttttgcctttg |
39300997 |
T |
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