View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14497_high_12 (Length: 341)
Name: NF14497_high_12
Description: NF14497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14497_high_12 |
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Alignment Details
Target: chr4 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 51961287 - 51961613
Alignment:
| Q |
1 |
tgcaatattggtcgcgatcccaaaccatttatcttgtcatgctgctgctgtctgctcctagggacaagtggacttagcatataaagcttgttagccgtag |
100 |
Q |
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| T |
51961287 |
tgcaatattggtcgcgatcccaaaacatttatcttgtcatgctgctgctgtctgctcctagggacaagtggacttcaaatataaagcttgttagccgtag |
51961386 |
T |
|
| Q |
101 |
tgcaatattgatgcttctttcaccttgaggcaaaatcatgttggcattgaagtgtgtgtctgcatggggatgaagggtgttctgttcttgccaaaatgga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51961387 |
tgcaatattgatgcttctttcaccttgaggcaaaatcatgttggcattgaagtgtgtgtctgcatggggatgaagggtgttctgttcttgccaaaatgga |
51961486 |
T |
|
| Q |
201 |
agggtggaagcctctaactttggcggttgaaagaaaagtgccttgtctttgatttgttgaataatgttgactttgagcttgattgcaaaatattggtgga |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51961487 |
agggtggaagcctctaactttggcggttgaaagaaaagtgccttgtctttgatttgttgaataatgttgactttgagcttgattgcaaaatattggtgga |
51961586 |
T |
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| Q |
301 |
tgcttttcacaacccaaagatgatgtc |
327 |
Q |
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||||||||||||||||||||||||||| |
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| T |
51961587 |
tgcttttcacaacccaaagatgatgtc |
51961613 |
T |
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