View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14497_high_6 (Length: 524)
Name: NF14497_high_6
Description: NF14497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14497_high_6 |
 |  |
|
| [»] scaffold0047 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 92; Significance: 2e-44; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 404 - 503
Target Start/End: Complemental strand, 3080234 - 3080135
Alignment:
| Q |
404 |
ttaaaagtgaaaacataccaaatagatgaaagtcgaggctagagtttggcatgtattcatatacaagcaacttttcattatcctcaatgcaacaacccaa |
503 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3080234 |
ttaaaagtgaaaacataccaaatagatgaaagtcaaggctagagtttggcatgtattcatatacaagcaacttttcattatcttcaatgcaacaacccaa |
3080135 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 413 - 503
Target Start/End: Complemental strand, 3094101 - 3094011
Alignment:
| Q |
413 |
aaaacataccaaatagatgaaagtcgaggctagagtttggcatgtattcatatacaagcaacttttcattatcctcaatgcaacaacccaa |
503 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3094101 |
aaaacataccaaatagatgaaagtcaaggctagagtttggcatgtattcatatacaagcaacttttcattatcctcaatgcaacaacccaa |
3094011 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 416 - 507
Target Start/End: Original strand, 4549198 - 4549289
Alignment:
| Q |
416 |
acataccaaatagatgaaagtcgaggctagagtttggcatgtattcatatacaagcaacttttcattatcctcaatgcaacaacccaatagt |
507 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4549198 |
acataccaaatagataaaagtcgaggctagagtttggcatgtattcatatagaagcaacttttcattatcctcaatgcaacaacccaatagt |
4549289 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 3080318 - 3080232
Alignment:
| Q |
11 |
gaagaatatgttagtatttgacacaaaaatgtatggagcaaacaacatagaataagtaacacgggaaacttgtgcttgaagtattta |
97 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||| ||||||| ||||| ||||| |
|
|
| T |
3080318 |
gaagaaaatgttagtatttgacacaaaaatgtatggagcagacagcatagaataagtaacatgggagacttgtggatgaagaattta |
3080232 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 42091795 - 42091861
Alignment:
| Q |
234 |
cacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaag |
300 |
Q |
| |
|
|||||||||||| || || || || ||||||||||||||| | ||||||||||||||| |||||||| |
|
|
| T |
42091795 |
cacatgttaaatgaaagagatgaaaaagtttgatgtttttgagatgaaaatgataattaattgtaag |
42091861 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 20519429 - 20519507
Alignment:
| Q |
195 |
acaaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgttttt |
273 |
Q |
| |
|
||||||| |||||||||||||||||||| |||| | | |||| ||| ||| ||| |||| || ||||||||||||||| |
|
|
| T |
20519429 |
acaaatatgattcaattttggaacgaaaaagatggatatcacacgttgaatgaagaaaatgaaaaagtttgatgttttt |
20519507 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 203 - 291
Target Start/End: Complemental strand, 54437739 - 54437651
Alignment:
| Q |
203 |
gattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataatt |
291 |
Q |
| |
|
|||| |||| ||||||||||| |||| || ||||||||||| ||||| || ||||||||| ||||| || | ||||||||| ||||| |
|
|
| T |
54437739 |
gattaaattctggaacgaaagagatgaagtttacatgttaaatgaaggatatgaagaagtttaatgttattgagatgaaaatggtaatt |
54437651 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 72; Significance: 2e-32; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 140 - 299
Target Start/End: Complemental strand, 34891529 - 34891371
Alignment:
| Q |
140 |
atatcggtgagtctatatttttccttgatgaatttggagtaatttatccctcgtgacaaatacgattcaattttggaacgaaagtgatgtagagcacatg |
239 |
Q |
| |
|
||||||||||| ||||||| |||||||||||| | || |||||||| ||||| |||||||||| |||| |||| |||| ||||| ||| |||| |||||| |
|
|
| T |
34891529 |
atatcggtgagcctatattcttccttgatgaactggg-gtaatttacccctcatgacaaatacaattcgatttgggaatgaaagagatctagatcacatg |
34891431 |
T |
 |
| Q |
240 |
ttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaa |
299 |
Q |
| |
|
|||||| ||| | |||||||||||||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
34891430 |
ttaaatgaagaagataaagaagtttgatgttcttaatatgaaaatgataatgaattgtaa |
34891371 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 146 - 299
Target Start/End: Original strand, 3191650 - 3191803
Alignment:
| Q |
146 |
gtgagtctatatttttccttgatgaatttggagtaatttatccctcgtgacaaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaat |
245 |
Q |
| |
|
||||||||| ||||||||| ||| ||| | |||||||| || || || ||||||||||||||||||| || ||||| |||||| | ||||| |||||| |
|
|
| T |
3191650 |
gtgagtctacatttttcctccatgtattggcggtaatttacccttcatgtcaaatacgattcaattttgaaatgaaagggatgtaaatcacatcttaaat |
3191749 |
T |
 |
| Q |
246 |
aaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaa |
299 |
Q |
| |
|
||||| ||||| || ||| ||||||| || ||||||| ||||||||||||||| |
|
|
| T |
3191750 |
gaaggagataaataaatttaatgttttaaagatgaaaacgataattgattgtaa |
3191803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 156 - 299
Target Start/End: Complemental strand, 42012781 - 42012641
Alignment:
| Q |
156 |
atttttccttgatgaatttggagtaatttatccctcgtgacaaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaata |
255 |
Q |
| |
|
||||||||||||| |||| || |||||||||||||| ||||| ||| ||||| |||||||||||||| |||||| | ||||| |||||| || | || |
|
|
| T |
42012781 |
atttttccttgattaattggg-gtaatttatccctcatgacatatatgattcgattttggaacgaaaaagatgtaaatcacatcttaaatgaa--agatt |
42012685 |
T |
 |
| Q |
256 |
aagaagtttgatgtttttaaaatgaaaatgataattgattgtaa |
299 |
Q |
| |
|
|||||||||||||||||||| || || || |||| ||||||||| |
|
|
| T |
42012684 |
aagaagtttgatgtttttaagataaagatcataactgattgtaa |
42012641 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 197 - 303
Target Start/End: Original strand, 32962358 - 32962464
Alignment:
| Q |
197 |
aaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattg |
296 |
Q |
| |
|
||||| ||||| |||||| ||| ||| ||||||| || ||||| ||||||||| || || ||||||||| || |||||||||| |||||||||||||| |
|
|
| T |
32962358 |
aaatatgattcgattttgaaacaaaaaatatgtagatcatatgttgaataaaggagatgaaaaagtttgattttcttaaaatgaatatgataattgattg |
32962457 |
T |
 |
| Q |
297 |
taagaag |
303 |
Q |
| |
|
| ||||| |
|
|
| T |
32962458 |
tcagaag |
32962464 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 31171313 - 31171365
Alignment:
| Q |
250 |
gaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
||||| |||||| ||||||||||||| ||||||||| |||||| ||||||||| |
|
|
| T |
31171313 |
gaaatgaagaagattgatgtttttaagatgaaaatggtaattggttgtaagaa |
31171365 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 298
Target Start/End: Original strand, 31152738 - 31152799
Alignment:
| Q |
237 |
atgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgta |
298 |
Q |
| |
|
||||| ||| || ||||| |||||| ||||||||||||| ||||||||| |||||| ||||| |
|
|
| T |
31152738 |
atgttgaatgaaagaaatgaagaagattgatgtttttaagatgaaaatggtaattggttgta |
31152799 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 32988604 - 32988667
Alignment:
| Q |
321 |
aatatgatttttccttgaaaggagtaaattaccccccaattcatcgaggggtaacgtagaaaaaa |
385 |
Q |
| |
|
||||||||||||| |||| | | |||||||||||| |||||||||||||| ||| ||| |||||| |
|
|
| T |
32988604 |
aatatgatttttctttgatatgtgtaaattacccc-caattcatcgagggataatgtataaaaaa |
32988667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 147 - 299
Target Start/End: Original strand, 25234284 - 25234436
Alignment:
| Q |
147 |
tgagtctatatttttccttgatgaatttggagtaatttatccctcgtgacaaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaata |
246 |
Q |
| |
|
|||| ||| |||||||||||||||||| | |||||||| | ||| ||||||||||||||| ||||||||||| ||| | | || | |||| |||||| |
|
|
| T |
25234284 |
tgagcctacatttttccttgatgaattacgggtaatttaccgctcatgacaaatacgattcgattttggaacgtaagaggtataaatcacaccttaaatg |
25234383 |
T |
 |
| Q |
247 |
aaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaa |
299 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
25234384 |
aaggagataaataagtttgatgtttttaaaatgaaagtgataactgattgtaa |
25234436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 11020059 - 11020145
Alignment:
| Q |
208 |
aattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgatt |
295 |
Q |
| |
|
||||||| |||||||| |||| | | |||||||||||||||||| ||||| | ||||||| ||||||| ||||||||||||| ||||| |
|
|
| T |
11020059 |
aattttgaaacgaaagagatgcaaatcacatgttaaataaaggagataaa-aggtttgatatttttaagatgaaaatgataactgatt |
11020145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 54000220 - 54000275
Alignment:
| Q |
234 |
cacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataa |
289 |
Q |
| |
|
||||| |||||| ||||| ||||||||||||||||||||||| || |||||||||| |
|
|
| T |
54000220 |
cacatcttaaatgaaggagataaagaagtttgatgtttttaagataaaaatgataa |
54000275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 25234449 - 25234513
Alignment:
| Q |
321 |
aatatgatttttccttgaaaggagtaaattaccccccaattcatcgaggggtaacgtagaaaaaac |
386 |
Q |
| |
|
||||| ||||||| |||||| |||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
25234449 |
aatataatttttcacggaaaggggtaaattacccc-caattcatcgaagggtaacgtagaaaaaac |
25234513 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 20512832 - 20512892
Alignment:
| Q |
235 |
acatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgatt |
295 |
Q |
| |
|
||||||||||| ||| | || |||||||||||||||| ||| |||||||||| |||||||| |
|
|
| T |
20512832 |
acatgttaaatgaagaagatgaagaagtttgatgtttataagatgaaaatgacaattgatt |
20512892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 387
Target Start/End: Complemental strand, 22050682 - 22050624
Alignment:
| Q |
327 |
atttttccttgaaaggagtaaattaccccccaattcatcgaggggtaacgtagaaaaaaca |
387 |
Q |
| |
|
||||||| || ||||| |||||||||||| || ||||| ||||||||||||||||||||| |
|
|
| T |
22050682 |
atttttctttaaaaggggtaaattacccc--aaatcatcaaggggtaacgtagaaaaaaca |
22050624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 270
Target Start/End: Complemental strand, 22050768 - 22050732
Alignment:
| Q |
234 |
cacatgttaaataaaggaaataaagaagtttgatgtt |
270 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
22050768 |
cacatgttaaatgaaggaaatgaagaagtttgatgtt |
22050732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 479
Target Start/End: Complemental strand, 36290325 - 36290293
Alignment:
| Q |
447 |
gtttggcatgtattcatatacaagcaacttttc |
479 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
36290325 |
gtttggcatgtattcatatacaagtaacttttc |
36290293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 59; Significance: 9e-25; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 193 - 299
Target Start/End: Complemental strand, 23577120 - 23577014
Alignment:
| Q |
193 |
tgacaaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattg |
292 |
Q |
| |
|
||||||||||||||| ||||||||| |||| |||||| | |||| ||||||||| || |||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
23577120 |
tgacaaatacgattcgattttggaataaaagagatgtaaataacatcttaaataaaagagataaagaaattttatgtttttaaaatgaaaatgataattg |
23577021 |
T |
 |
| Q |
293 |
attgtaa |
299 |
Q |
| |
|
||||||| |
|
|
| T |
23577020 |
attgtaa |
23577014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 302
Target Start/End: Original strand, 20206476 - 20206527
Alignment:
| Q |
251 |
aaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
|||| ||||||||||||||| || | |||||||||||||||||||||||||| |
|
|
| T |
20206476 |
aaattaagaagtttgatgttattgagatgaaaatgataattgattgtaagaa |
20206527 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 302
Target Start/End: Original strand, 22100499 - 22100550
Alignment:
| Q |
251 |
aaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
|||| ||||||||||||||| || | |||||||||||||||||||||||||| |
|
|
| T |
22100499 |
aaattaagaagtttgatgttattgagatgaaaatgataattgattgtaagaa |
22100550 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 32342646 - 32342603
Alignment:
| Q |
259 |
aagtttgatgtttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
32342646 |
aagtttgatgtttttgagatgaaaatgataattgattgtaagaa |
32342603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 49; Significance: 8e-19; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 156 - 299
Target Start/End: Original strand, 7113710 - 7113854
Alignment:
| Q |
156 |
atttttccttgatgaattt-ggagtaatttatccctcgtgacaaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaat |
254 |
Q |
| |
|
|||||||||||||||||| || |||||||| | || || |||||||||||||||| |||||| |||| |||||| | ||||| |||||| |||| || |
|
|
| T |
7113710 |
atttttccttgatgaattgaggggtaatttaccgctgatgtcaaatacgattcaattatggaacaaaagagatgtaaatcacatcttaaatgaaggtgat |
7113809 |
T |
 |
| Q |
255 |
aaagaagtttgatgtttttaaaatgaaaatgataattgattgtaa |
299 |
Q |
| |
|
|||||| |||||||| ||| |||||||| |||||||||||||| |
|
|
| T |
7113810 |
aaagaaatttgatgtagttatgatgaaaataataattgattgtaa |
7113854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 303
Target Start/End: Original strand, 39730394 - 39730519
Alignment:
| Q |
178 |
gtaatttatccctcgtgacaaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgtttttaaaa |
277 |
Q |
| |
|
|||||||| ||||| ||||| |||| |||| ||||||||||||| | |||||| | |||| || || ||||| ||||||||||| || |||||||| | |
|
|
| T |
39730394 |
gtaatttacccctcatgacatatacaattcgattttggaacgaacgagatgtatattacatcttcgatgaaggagataaagaagttcgaagtttttaaga |
39730493 |
T |
 |
| Q |
278 |
tgaaaatgataattgattgtaagaag |
303 |
Q |
| |
|
|| |||||||| ||||||||||||| |
|
|
| T |
39730494 |
tggtaatgataactgattgtaagaag |
39730519 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 302
Target Start/End: Complemental strand, 973219 - 973114
Alignment:
| Q |
197 |
aaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattg |
296 |
Q |
| |
|
||||| |||||||||||| || ||| | |||| ||| |||||||| ||||||||| || ||||| ||| |||||||| | || |||||||||| | |||| |
|
|
| T |
973219 |
aaatatgattcaattttgtaatgaatgagatgaagatcacatgttgaataaaggagatgaagaaatttaatgtttttgagataaaaatgataactaattg |
973120 |
T |
 |
| Q |
297 |
taagaa |
302 |
Q |
| |
|
|||||| |
|
|
| T |
973119 |
taagaa |
973114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 303
Target Start/End: Original strand, 2243311 - 2243389
Alignment:
| Q |
225 |
gatgtagagcacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaagaag |
303 |
Q |
| |
|
|||| ||| |||||||| ||| ||||| || ||||||||||||||| || | ||||||||| ||| | ||||||||||| |
|
|
| T |
2243311 |
gatggagatcacatgttgaatgaaggatatgaagaagtttgatgttcttgagatgaaaatggtaactaattgtaagaag |
2243389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 5205524 - 5205581
Alignment:
| Q |
216 |
aacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgttttt |
273 |
Q |
| |
|
||||||| |||| ||| |||||||| ||||||||| ||||| ||||||||||||||| |
|
|
| T |
5205524 |
aacgaaatagatggagatcacatgtttaataaaggagataaaaaagtttgatgttttt |
5205581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 302
Target Start/End: Original strand, 7215264 - 7215368
Alignment:
| Q |
197 |
aaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattg |
296 |
Q |
| |
|
||||| ||||||||||| ||| |||| |||| ||| ||||| || ||| ||| | | |||||||||||||||| || | ||||||||| || ||||||| |
|
|
| T |
7215264 |
aaatatgattcaattttagaatgaaaaagatggagatcacatattcaatgaagaaga-aaagaagtttgatgttcttgagatgaaaatggtagttgattg |
7215362 |
T |
 |
| Q |
297 |
taagaa |
302 |
Q |
| |
|
|||||| |
|
|
| T |
7215363 |
taagaa |
7215368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 302
Target Start/End: Complemental strand, 37077868 - 37077763
Alignment:
| Q |
197 |
aaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattg |
296 |
Q |
| |
|
||||| |||||||||||| || ||| | || ||| |||||||| ||| || |||| ||||| |||||||||||| | ||||||||| ||| |||||| |
|
|
| T |
37077868 |
aaataagattcaattttgaaatgaatgatatagagatcacatgttgaatgaaaaaaattaagaaatttgatgtttttgagatgaaaatgctaactgattg |
37077769 |
T |
 |
| Q |
297 |
taagaa |
302 |
Q |
| |
|
|||||| |
|
|
| T |
37077768 |
taagaa |
37077763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 298
Target Start/End: Original strand, 13712867 - 13712987
Alignment:
| Q |
178 |
gtaatttatccctcgtgacaaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgtttttaaaa |
277 |
Q |
| |
|
||||||||||||| |||||||||| ||| ||||||||| |||| |||||||| |||||||||||| ||||| ||||| |||||||| ||||||| | |
|
|
| T |
13712867 |
gtaatttatccctaatgacaaatacaattaggttttggaaccaaagagatgtagatcacatgttaaatgaaggagataaaaaagtttgaaatttttaaga |
13712966 |
T |
 |
| Q |
278 |
tgaaaatgataattgattgta |
298 |
Q |
| |
|
| |||||| ||| ||||||| |
|
|
| T |
13712967 |
taaaaatggtaaccgattgta |
13712987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 302
Target Start/End: Complemental strand, 16576552 - 16576420
Alignment:
| Q |
170 |
aatttggagtaatttatccctcgtgacaaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgt |
269 |
Q |
| |
|
||||||| |||||||||| | ||||||||| |||||||| || |||||| |||| ||| |||||||||| ||||| || |||| ||||| ||| |
|
|
| T |
16576552 |
aatttggggtaatttatctttaatgacaaatatgattcaataatgtaacgaagaagatggagattgcatgttaaatgaaggatatgaagatgtttgttgt |
16576453 |
T |
 |
| Q |
270 |
ttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||| |
|
|
| T |
16576452 |
ttttgaaatgaaaatgataaatgattgtaagaa |
16576420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 302
Target Start/End: Complemental strand, 16576390 - 16576251
Alignment:
| Q |
162 |
ccttgatgaatttggagtaatttatccctcgtgacaaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaag |
261 |
Q |
| |
|
|||||||||||| || ||||||| |||| ||| || || ||||| ||| ||||||||| | || | ||| |||||||| ||| ||||| || |||||| |
|
|
| T |
16576390 |
ccttgatgaattgggt-taatttacccctaatgataagtatgattcgattctggaacgaatgagaaggagatcacatgttgaatgaaggagatgaagaag |
16576292 |
T |
 |
| Q |
262 |
tttgatgtttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
||||||||| || | | ||||||| |||||||||||||||| |
|
|
| T |
16576291 |
tttgatgttcttgagaggaaaatggtaattgattgtaagaa |
16576251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 2909930 - 2909844
Alignment:
| Q |
197 |
aaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaa |
283 |
Q |
| |
|
||||| ||||||||||| ||| ||| ||||||| ||||||| ||| ||||| || |||||||||||||||||||||||||||| |
|
|
| T |
2909930 |
aaataagattcaattttagaatgaagtaaatgtagattacatgttgaatgaaggagatgaagaagtttgatgtttttaaaatgaaaa |
2909844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 35371182 - 35371117
Alignment:
| Q |
234 |
cacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaa |
299 |
Q |
| |
|
|||||||||||| |||| || |||||||||||||||| || | ||||||||| ||| ||||||||| |
|
|
| T |
35371182 |
cacatgttaaatgaaggtaacaaagaagtttgatgttcttgatatgaaaatggtaaatgattgtaa |
35371117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 302
Target Start/End: Complemental strand, 16863545 - 16863459
Alignment:
| Q |
216 |
aacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
|||||| | |||||||| ||||| || ||||||| | || ||||| ||||||||| || | ||||||||| ||| |||||||||||| |
|
|
| T |
16863545 |
aacgaaggagatgtagatcacatattgaataaagaagatgaagaaatttgatgttcttgagatgaaaatggtaactgattgtaagaa |
16863459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 302
Target Start/End: Original strand, 13712757 - 13712822
Alignment:
| Q |
237 |
atgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
||||| ||||||| | |||||||||||||||||| |||| ||| ||||| ||| |||| ||||||| |
|
|
| T |
13712757 |
atgttgaataaagaagataaagaagtttgatgttcttaagatggaaatggtaactgatagtaagaa |
13712822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 44; Significance: 8e-16; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 203 - 302
Target Start/End: Original strand, 32166608 - 32166707
Alignment:
| Q |
203 |
gattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
||||||||| | |||||||| |||| ||| ||||||| ||||||||| || ||||||||||||||| || | |||||||||||||||||| ||||||| |
|
|
| T |
32166608 |
gattcaattctaaaacgaaagagatgaagattacatgttgaataaaggagatgaagaagtttgatgttcttgagatgaaaatgataattgatagtaagaa |
32166707 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 32166727 - 32166816
Alignment:
| Q |
156 |
atttttccttgatgaatttggagtaatttatccctcgtgacaaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaat |
245 |
Q |
| |
|
||||||| |||||||||| || |||||||| | || |||||| |||||||| ||||||||||||||| |||||| | |||||||||||| |
|
|
| T |
32166727 |
atttttctttgatgaattgggtgtaatttacctctaatgacaagtacgattcgattttggaacgaaagagatgtaaatcacatgttaaat |
32166816 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 413 - 508
Target Start/End: Original strand, 15805837 - 15805932
Alignment:
| Q |
413 |
aaaacataccaaatagatgaaagtcgaggctagagtttggcatgtattcatatacaagcaacttttcattatcctcaatgcaacaacccaatagtt |
508 |
Q |
| |
|
|||||||||| || || |||||||||||||| || ||| ||| ||||||||||||||| | |||||||| ||||| ||||| || ||||| |||| |
|
|
| T |
15805837 |
aaaacataccgaaaaggtgaaagtcgaggcttgaattttgcaagtattcatatacaagtattttttcattttcctccatgcagcagcccaagagtt |
15805932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 503
Target Start/End: Original strand, 15697845 - 15697935
Alignment:
| Q |
413 |
aaaacataccaaatagatgaaagtcgaggctagagtttggcatgtattcatatacaagcaacttttcattatcctcaatgcaacaacccaa |
503 |
Q |
| |
|
|||||||||| || || |||||||| ||||| || || ||||||||||||||||| || | ||||||||| | |||||||| |||||||| |
|
|
| T |
15697845 |
aaaacataccgaaaaggtgaaagtcaaggcttgaattcggcatgtattcatatactagtatcttttcatttccttcaatgcagcaacccaa |
15697935 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 303
Target Start/End: Complemental strand, 33897735 - 33897571
Alignment:
| Q |
139 |
tatatcggtgagtctatatttttccttgatgaatttggagtaatttatccctcgtgacaaatacgattcaattttggaacgaaagtgatgtagagcacat |
238 |
Q |
| |
|
||||||| ||| ||| ||||||||||||| |||| |||||||||| || ||| ||| |||||| ||||| |||||||| |||||| | ||||| |
|
|
| T |
33897735 |
tatatcgacgagcctacatttttccttgattaattgagagtaatttacatctgatgataaacacgattagattttagaacgaaaaagatgtaaatcacat |
33897636 |
T |
 |
| Q |
239 |
gttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaagaag |
303 |
Q |
| |
|
||||||| ||||| |||| ||| |||||||||| ||||||||||||| |||| ||||||| |
|
|
| T |
33897635 |
gttaaatgaaggagataattttttttaatgtttttaagatgaaaatgataaccgattataagaag |
33897571 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 410 - 508
Target Start/End: Original strand, 15712267 - 15712365
Alignment:
| Q |
410 |
gtgaaaacataccaaatagatgaaagtcgaggctagagtttggcatgtattcatatacaagcaacttttcattatcctcaatgcaacaacccaatagtt |
508 |
Q |
| |
|
|||||||||||| || || |||||||||||||| || ||| ||||||| || ||||| || | ||||||||| | |||| |||||||||||| |||| |
|
|
| T |
15712267 |
gtgaaaacatactgaaaaggtgaaagtcgaggcttgaattttgcatgtactcgtatactagtatcttttcattttgttcaaagcaacaacccaagagtt |
15712365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 37010310 - 37010400
Alignment:
| Q |
195 |
acaaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatg |
285 |
Q |
| |
|
||||||| ||||| ||| ||||| ||| | ||| ||| |||||||||||| || ||||| || ||||||||||||||| | ||||||||| |
|
|
| T |
37010310 |
acaaatatgattcgattatggaatgaaggagatagagatcacatgttaaatgaaagaaatgaataagtttgatgtttttgagatgaaaatg |
37010400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 33897807 - 33897743
Alignment:
| Q |
235 |
acatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaa |
299 |
Q |
| |
|
||||||| ||| |||||||| ||||| |||||||||||| | |||||||| |||||||| |||| |
|
|
| T |
33897807 |
acatgttgaatgaaggaaattaagaattttgatgtttttgagatgaaaatagtaattgatagtaa |
33897743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 302
Target Start/End: Complemental strand, 34695908 - 34695832
Alignment:
| Q |
226 |
atgtagagcacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
||||||| |||||||| ||| ||||| | ||||| |||||| |||| ||| ||||||||||| |||||||||||| |
|
|
| T |
34695908 |
atgtagatcacatgttgaatgaaggaggtgaagaaatttgataattttgaaaagaaaatgataactgattgtaagaa |
34695832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 44; Significance: 8e-16; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 138 - 284
Target Start/End: Original strand, 44342107 - 44342254
Alignment:
| Q |
138 |
ctatatcggtgagtctatatttttccttgatgaatttggagtaatttatccctcgtgacaaatacgattcaattttggaacgaaagtgatgtagagcaca |
237 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||| ||| |||||| ||| || ||| ||||| |||| |||||| ||||||| ||| || | ||| |
|
|
| T |
44342107 |
ctatatcggtgagcctacatttttccttgatgaattgggaataatttgtccatcatgataaataggatttgattttgatacgaaagggatataaatcacg |
44342206 |
T |
 |
| Q |
238 |
tgtt-aaataaaggaaataaagaagtttgatgtttttaaaatgaaaat |
284 |
Q |
| |
|
| || |||||| || ||||||||| ||||||||||||| |||||||| |
|
|
| T |
44342207 |
tcttaaaataatagagataaagaagattgatgtttttaagatgaaaat |
44342254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 204 - 302
Target Start/End: Complemental strand, 68198 - 68100
Alignment:
| Q |
204 |
attcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
|||| |||||||||||||| |||| ||| |||||||||||| ||||| || |||||||| |||||| || |||| |||||| ||| | |||||||||| |
|
|
| T |
68198 |
attcgattttggaacgaaaaagatggagatcacatgttaaatgaaggagatgaagaagttagatgttcttgaaataaaaatggtaactcattgtaagaa |
68100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 302
Target Start/End: Complemental strand, 35957125 - 35956986
Alignment:
| Q |
161 |
tccttgatgaatttggagtaatttatccctcgtgacaaatacgattcaattttggaacgaaagtgatgtagagcacatgttaaataaaggaaataaagaa |
260 |
Q |
| |
|
||||||||||||| |||||||||| |||| |||||| | ||| ||||| |||||||| |||| ||| ||||| ||||||||| ||||| | || |
|
|
| T |
35957125 |
tccttgatgaattgagagtaattta--cctcatgacaacttgagttcgatttttgaacgaaatagatggagatcacatattaaataaaagaaatggaaaa |
35957028 |
T |
 |
| Q |
261 |
gtttgatgtttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
||||||||||||| | || |||||| ||||| |||||||||| |
|
|
| T |
35957027 |
gtttgatgtttttgagataaaaatggtaattaattgtaagaa |
35956986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 35660808 - 35660763
Alignment:
| Q |
257 |
agaagtttgatgtttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||| |||||| |
|
|
| T |
35660808 |
agaagtttgatgtttttgaaatgaaaatggtaattgattttaagaa |
35660763 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 24873811 - 24873768
Alignment:
| Q |
259 |
aagtttgatgtttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
||||||||| || |||||||||||||| |||||||||||||||| |
|
|
| T |
24873811 |
aagtttgatcttcttaaaatgaaaatggtaattgattgtaagaa |
24873768 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 24874644 - 24874601
Alignment:
| Q |
259 |
aagtttgatgtttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
||||||||| || |||||||||||||| |||||||||||||||| |
|
|
| T |
24874644 |
aagtttgatcttcttaaaatgaaaatggtaattgattgtaagaa |
24874601 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 10775212 - 10775166
Alignment:
| Q |
256 |
aagaagtttgatgtttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
||||||||||||||| |||| ||||||||| ||||||||| |||||| |
|
|
| T |
10775212 |
aagaagtttgatgttcttaagatgaaaatggtaattgattctaagaa |
10775166 |
T |
 |
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Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 302
Target Start/End: Original strand, 45967838 - 45967898
Alignment:
| Q |
242 |
aaataaaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaagaa |
302 |
Q |
| |
|
|||||||||| || ||||| ||| || ||||| ||||||||||||||| ||||||||||| |
|
|
| T |
45967838 |
aaataaaggagatgaagaaatttaatatttttgaaatgaaaatgataacagattgtaagaa |
45967898 |
T |
 |
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Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 52432887 - 52432835
Alignment:
| Q |
251 |
aaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaagaag |
303 |
Q |
| |
|
|||| |||||||||||||||||| | | ||||||||||| | ||||||||||| |
|
|
| T |
52432887 |
aaatgaagaagtttgatgtttttgagaagaaaatgataactaattgtaagaag |
52432835 |
T |
 |
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Target: scaffold0047 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0047
Description:
Target: scaffold0047; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 303
Target Start/End: Original strand, 62744 - 62800
Alignment:
| Q |
247 |
aaggaaataaagaagtttgatgtttttaaaatgaaaatgataattgattgtaagaag |
303 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||| |||||| ||||| ||||||| |
|
|
| T |
62744 |
aaggagataaagaagtttgatgtttttaagatgaaattgataactgattctaagaag |
62800 |
T |
 |
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