View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14497_low_16 (Length: 276)
Name: NF14497_low_16
Description: NF14497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14497_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 45 - 262
Target Start/End: Original strand, 44944196 - 44944417
Alignment:
| Q |
45 |
acacctaagaagcagaagaaaccaaaatccataagagataaaatgactagaaacctatgaataatagcgccattaatcatgatnnnnnnnnnnnnnnnnn |
144 |
Q |
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| T |
44944196 |
acacctaagaagcagaagaaaccaaaatccataagagataaaatgactagaaacctatgaataatagcgccattaatcatgataaaaaaaataactaaaa |
44944295 |
T |
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| Q |
145 |
nnngaggattgctatta----atcacgataaaatatgtccctaaggaattaagaaaatacaaagttgttcaagcaggagatcaagggagggtattgcatg |
240 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||| |
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| T |
44944296 |
aaagaggattgctattaattaatcacgataaaatatgtccctaaggaattaagaaaatataaagttgttcaagccggaaatcaagggagggtattgcatg |
44944395 |
T |
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| Q |
241 |
gaattaagaaaatatttgcagt |
262 |
Q |
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|||||||||||||||||||||| |
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| T |
44944396 |
gaattaagaaaatatttgcagt |
44944417 |
T |
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