View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1449_low_40 (Length: 234)

Name: NF1449_low_40
Description: NF1449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1449_low_40
NF1449_low_40
[»] chr5 (35 HSPs)
chr5 (12-111)||(16966277-16966376)
chr5 (156-219)||(25408537-25408600)
chr5 (156-219)||(25408626-25408689)
chr5 (156-219)||(12750201-12750264)
chr5 (156-214)||(5777174-5777232)
chr5 (156-219)||(33652411-33652474)
chr5 (169-219)||(5777263-5777313)
chr5 (157-219)||(12750113-12750175)
chr5 (173-219)||(30893859-30893905)
chr5 (173-209)||(11915764-11915800)
chr5 (167-219)||(22581932-22581984)
chr5 (171-219)||(30780079-30780127)
chr5 (175-219)||(30780153-30780197)
chr5 (156-219)||(12646587-12646650)
chr5 (156-219)||(19531295-19531358)
chr5 (158-217)||(33652494-33652553)
chr5 (155-219)||(43506177-43506241)
chr5 (176-219)||(3100419-3100462)
chr5 (156-219)||(3851357-3851420)
chr5 (156-219)||(3851446-3851509)
chr5 (156-219)||(6763780-6763843)
chr5 (176-219)||(13654591-13654634)
chr5 (156-219)||(15712115-15712178)
chr5 (173-219)||(1180757-1180803)
chr5 (157-219)||(19531384-19531446)
chr5 (173-219)||(42013905-42013951)
chr5 (174-219)||(11262340-11262385)
chr5 (174-219)||(11262411-11262456)
chr5 (174-219)||(37944614-37944659)
chr5 (174-219)||(37944685-37944730)
chr5 (174-219)||(38835537-38835582)
chr5 (174-219)||(42013834-42013879)
chr5 (176-216)||(26045279-26045319)
chr5 (155-219)||(26300104-26300168)
chr5 (176-219)||(40100169-40100213)
[»] chr2 (27 HSPs)
chr2 (156-219)||(14308653-14308716)
chr2 (156-219)||(3123986-3124049)
chr2 (157-219)||(14308729-14308791)
chr2 (156-219)||(27881231-27881294)
chr2 (170-219)||(18356057-18356106)
chr2 (156-219)||(3123897-3123960)
chr2 (156-219)||(10222055-10222118)
chr2 (157-219)||(10221967-10222029)
chr2 (173-219)||(17866263-17866309)
chr2 (157-219)||(45035866-45035928)
chr2 (175-219)||(44274624-44274668)
chr2 (156-219)||(12242323-12242386)
chr2 (174-217)||(26836240-26836283)
chr2 (176-219)||(41824275-41824318)
chr2 (156-217)||(3887827-3887888)
chr2 (156-217)||(43426713-43426774)
chr2 (154-219)||(44089418-44089483)
chr2 (173-217)||(27881322-27881366)
chr2 (176-219)||(12242254-12242297)
chr2 (156-219)||(34248498-34248561)
chr2 (156-219)||(41056882-41056945)
chr2 (157-219)||(17866175-17866237)
chr2 (173-219)||(18356132-18356177)
chr2 (157-219)||(23378025-23378087)
chr2 (174-219)||(30902285-30902330)
chr2 (174-219)||(34248427-34248472)
chr2 (155-219)||(38594427-38594491)
[»] chr6 (24 HSPs)
chr6 (169-219)||(3012443-3012493)
chr6 (155-219)||(13276479-13276543)
chr6 (157-219)||(7158251-7158313)
chr6 (157-219)||(7158339-7158401)
chr6 (156-219)||(15836622-15836685)
chr6 (153-219)||(13277105-13277171)
chr6 (169-219)||(15836546-15836596)
chr6 (155-219)||(33053758-33053822)
chr6 (156-219)||(8030398-8030461)
chr6 (156-219)||(15718476-15718539)
chr6 (156-214)||(33018939-33018997)
chr6 (153-214)||(2990547-2990608)
chr6 (155-219)||(21998032-21998096)
chr6 (184-219)||(33053848-33053883)
chr6 (173-219)||(3012371-3012417)
chr6 (173-219)||(4808271-4808317)
chr6 (149-219)||(8449561-8449631)
chr6 (176-218)||(8449660-8449702)
chr6 (149-219)||(8458365-8458435)
chr6 (176-218)||(8458464-8458506)
chr6 (157-219)||(32254904-32254966)
chr6 (174-219)||(4844301-4844346)
chr6 (176-217)||(18886322-18886363)
chr6 (155-219)||(14031752-14031816)
[»] chr4 (33 HSPs)
chr4 (157-219)||(54508164-54508226)
chr4 (157-219)||(4370395-4370457)
chr4 (156-217)||(52674902-52674963)
chr4 (173-219)||(20598268-20598314)
chr4 (173-219)||(54106486-54106532)
chr4 (173-219)||(54106558-54106604)
chr4 (156-217)||(41905872-41905933)
chr4 (157-217)||(20598342-20598402)
chr4 (156-219)||(5535708-5535771)
chr4 (151-219)||(16040044-16040111)
chr4 (155-219)||(54922259-54922323)
chr4 (156-219)||(19934721-19934784)
chr4 (157-219)||(33558880-33558942)
chr4 (174-219)||(3504089-3504134)
chr4 (160-228)||(4370475-4370542)
chr4 (157-217)||(33558792-33558852)
chr4 (176-219)||(11796667-11796710)
chr4 (176-219)||(26636523-26636566)
chr4 (176-219)||(29006849-29006892)
chr4 (176-219)||(35005138-35005181)
chr4 (176-219)||(52914081-52914124)
chr4 (176-219)||(54164896-54164939)
chr4 (155-217)||(22020109-22020171)
chr4 (157-219)||(27537051-27537113)
chr4 (174-219)||(13689619-13689664)
chr4 (176-217)||(19595523-19595564)
chr4 (178-219)||(20215642-20215683)
chr4 (174-219)||(24941123-24941168)
chr4 (174-219)||(44239867-44239912)
chr4 (178-219)||(51736226-51736267)
chr4 (173-214)||(54922354-54922395)
chr4 (184-220)||(28001748-28001784)
chr4 (176-212)||(54338916-54338952)
[»] chr3 (23 HSPs)
chr3 (156-219)||(26367465-26367528)
chr3 (156-217)||(4980267-4980328)
chr3 (176-219)||(2128444-2128487)
chr3 (169-219)||(26367558-26367608)
chr3 (155-217)||(27707171-27707233)
chr3 (157-218)||(7981140-7981201)
chr3 (167-219)||(31706618-31706670)
chr3 (156-215)||(35572087-35572146)
chr3 (177-219)||(4980356-4980398)
chr3 (157-219)||(27707261-27707323)
chr3 (156-219)||(5919426-5919490)
chr3 (173-218)||(35572011-35572056)
chr3 (173-217)||(7981230-7981274)
chr3 (176-219)||(1086592-1086635)
chr3 (176-219)||(10872755-10872798)
chr3 (176-219)||(22496965-22497008)
chr3 (174-217)||(29720234-29720277)
chr3 (176-219)||(42787698-42787741)
chr3 (176-217)||(13900242-13900284)
chr3 (173-219)||(31706696-31706742)
chr3 (174-219)||(52931653-52931698)
chr3 (167-219)||(50466818-50466870)
chr3 (155-219)||(51239326-51239390)
[»] chr7 (28 HSPs)
chr7 (173-219)||(31417600-31417646)
chr7 (159-219)||(44416529-44416589)
chr7 (159-218)||(14995949-14996008)
chr7 (156-219)||(15051166-15051229)
chr7 (157-219)||(15051078-15051140)
chr7 (169-219)||(22752567-22752617)
chr7 (150-219)||(29779703-29779771)
chr7 (168-217)||(35216482-35216531)
chr7 (157-217)||(14995860-14995920)
chr7 (156-219)||(8595141-8595204)
chr7 (156-219)||(21886461-21886524)
chr7 (156-219)||(22106750-22106813)
chr7 (156-219)||(40529538-40529601)
chr7 (156-219)||(44416615-44416678)
chr7 (180-218)||(27242498-27242536)
chr7 (154-219)||(34703526-34703591)
chr7 (157-213)||(31417351-31417407)
chr7 (176-219)||(34840628-34840671)
chr7 (174-219)||(1706916-1706961)
chr7 (174-219)||(21387588-21387633)
chr7 (173-218)||(29779798-29779843)
chr7 (157-218)||(40416901-40416962)
chr7 (174-219)||(40416989-40417034)
chr7 (150-218)||(6455537-6455605)
chr7 (156-216)||(10422894-10422954)
chr7 (155-219)||(22752643-22752707)
chr7 (183-219)||(32549904-32549940)
chr7 (176-216)||(43813139-43813179)
[»] chr8 (18 HSPs)
chr8 (159-219)||(29424066-29424126)
chr8 (169-219)||(21435752-21435803)
chr8 (157-219)||(15936198-15936260)
chr8 (160-216)||(7223896-7223952)
chr8 (176-219)||(7428906-7428949)
chr8 (156-219)||(8506300-8506363)
chr8 (156-219)||(9056015-9056078)
chr8 (176-219)||(24418963-24419006)
chr8 (176-219)||(5888350-5888393)
chr8 (176-219)||(24820380-24820423)
chr8 (173-215)||(8506229-8506270)
chr8 (173-219)||(15936286-15936332)
chr8 (173-219)||(45407067-45407113)
chr8 (176-216)||(6260694-6260735)
chr8 (182-219)||(7428975-7429012)
chr8 (156-217)||(13211233-13211294)
chr8 (174-219)||(26014581-26014626)
chr8 (173-214)||(29423994-29424035)
[»] chr1 (42 HSPs)
chr1 (160-219)||(15351798-15351857)
chr1 (173-214)||(1741620-1741661)
chr1 (155-219)||(15351708-15351772)
chr1 (155-219)||(38468679-38468743)
chr1 (177-219)||(8984203-8984245)
chr1 (155-217)||(8984273-8984335)
chr1 (156-214)||(21444198-21444256)
chr1 (173-219)||(26937872-26937918)
chr1 (173-214)||(7037905-7037946)
chr1 (150-219)||(23944025-23944094)
chr1 (156-215)||(26937948-26938007)
chr1 (157-219)||(3384218-3384280)
chr1 (173-219)||(14958692-14958738)
chr1 (167-217)||(43318093-43318143)
chr1 (174-219)||(5431423-5431468)
chr1 (173-218)||(14958765-14958810)
chr1 (175-219)||(1811278-1811322)
chr1 (176-216)||(5431355-5431395)
chr1 (155-219)||(14418140-14418204)
chr1 (159-219)||(34953979-34954039)
chr1 (176-220)||(51022731-51022775)
chr1 (156-219)||(1035881-1035944)
chr1 (176-219)||(10256795-10256838)
chr1 (156-219)||(31008342-31008405)
chr1 (176-219)||(34597534-34597577)
chr1 (176-219)||(34597596-34597639)
chr1 (176-219)||(38834625-38834668)
chr1 (176-219)||(42660371-42660414)
chr1 (156-219)||(48083498-48083561)
chr1 (157-219)||(8257938-8258000)
chr1 (157-219)||(8258026-8258088)
chr1 (173-219)||(38468769-38468815)
chr1 (146-219)||(3549862-3549935)
chr1 (176-217)||(46412717-46412758)
chr1 (157-217)||(1035972-1036032)
chr1 (179-219)||(13048674-13048714)
chr1 (179-219)||(13053671-13053711)
chr1 (183-215)||(31325897-31325929)
chr1 (155-219)||(33604074-33604138)
chr1 (174-218)||(42915659-42915703)
chr1 (176-220)||(43728268-43728312)
chr1 (155-219)||(52923316-52923380)
[»] scaffold0024 (2 HSPs)
scaffold0024 (157-219)||(100054-100116)
scaffold0024 (150-219)||(120133-120202)
[»] scaffold0015 (1 HSPs)
scaffold0015 (173-219)||(17318-17362)
[»] scaffold0149 (1 HSPs)
scaffold0149 (176-219)||(24689-24732)
[»] scaffold0007 (1 HSPs)
scaffold0007 (156-219)||(246878-246941)
[»] scaffold0536 (1 HSPs)
scaffold0536 (157-215)||(4037-4095)


Alignment Details
Target: chr5 (Bit Score: 92; Significance: 8e-45; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 16966376 - 16966277
Alignment:
Q  12 ccaacaatatgtgtaacaagtggcaacatgttcaatgccctgacttttagtaacacatcaatcaccgacacaaaacctacagtcgatcaccacattccaa 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16966376 ccaataatatgtgtaacaagtggcaacatgttcaatgccctgacttttagtaacacatcaatcaccgacacaaaacctacagtcgatcaccatattccaa 16966277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 25408537 - 25408600
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| | ||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  25408537 atacaccctccggtcacaaatataagcaaaaattcatattttagattcattcaataaatgatgt 25408600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 25408689 - 25408626
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||| || | ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25408689 atacaccatccggtcataaatataagcaaaaatttatgttttagattcattcaataaatgatgt 25408626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 12750264 - 12750201
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| | ||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  12750264 atacaccctccggtcacaaatataagcaaaaattcatgttttaaattcattcaataaataatgt 12750201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 5777174 - 5777232
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaat 214  Q
    |||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||    
T  5777174 atacaccctccgatcataaatataagcaaaaatttatgttttaaatttattcaataaat 5777232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 33652411 - 33652474
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||| | ||||| | ||||||| ||||||||||||||||||| |||||||||||||||||    
T  33652411 atacacccaccgatcacatatataagaaaaaattcatgttttagatccattcaataaatgatgt 33652474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 5777313 - 5777263
Alignment:
Q  169 tcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  5777313 tcataaatataagtaaaaattcatattttacattcattcaataaatgatgt 5777263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 12750113 - 12750175
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| | ||| |||||||| |||||||| ||||||||||| |||||||||||||||||    
T  12750113 tacaccctccggtcacaaatataaacaaaaatttatgttttagatacattcaataaatgatgt 12750175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 30893905 - 30893859
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  30893905 aaatataagaaaaaatccatgttttagattcattcaataaatgatgt 30893859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 11915764 - 11915800
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaa 209  Q
    |||||||||||||||||||||||||||||||||||||    
T  11915764 aaatataagcaaaaattcatgttttagattcattcaa 11915800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 22581932 - 22581984
Alignment:
Q  167 gatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  22581932 gatcacaaatataagcaaaaattcatattttagattcatttaataaattatgt 22581984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 30780079 - 30780127
Alignment:
Q  171 ataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  30780079 ataaatataagcaaaaattcatattttaaatttattcaataaatgatgt 30780127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 30780197 - 30780153
Alignment:
Q  175 atataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||    
T  30780197 atataagcaaaaatttatgttttaaattcattcaataaatgatgt 30780153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 12646650 - 12646587
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||| |||| | ||||||||||||||||||||| |  ||||||||||||| ||||||||||||    
T  12646650 atacatcctccggtcataaatataagcaaaaatttactttttagattcatttaataaatgatgt 12646587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 19531295 - 19531358
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| | ||| |||||||||||||||||||  |||||||| |||||||| ||||||||    
T  19531295 atacaccctccggtcacaaatataagcaaaaattcactttttagatacattcaattaatgatgt 19531358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 33652553 - 33652494
Alignment:
Q  158 acaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    |||||||||  ||||||||||||||||||||| || ||||||||| ||| ||||||||||    
T  33652553 acaccctctagtcataaatataagcaaaaattaatattttagatttatttaataaatgat 33652494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 43506241 - 43506177
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||| |||  | ||||||||||| ||||  ||||||||||||||| ||||||||||    
T  43506241 catacaccctctggtcactattataagcaaaatttcactttttagattcattcattaaatgatgt 43506177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 3100419 - 3100462
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||| |  ||||||||||||||||||||||||||    
T  3100419 tataagcaaaaattaacattttagattcattcaataaatgatgt 3100462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 3851357 - 3851420
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| |||||  ||||||||||||||| ||  |||||||| |||||||| ||||||||    
T  3851357 atacaccctccgatcactaatataagcaaaaatccactttttagatacattcaattaatgatgt 3851420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 3851509 - 3851446
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| | |||  ||||||||||||||||||| |||||||| |||| ||| ||||||||    
T  3851509 atacaccctccggtcactaatataagcaaaaattcattttttagatacatttaattaatgatgt 3851446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 6763843 - 6763780
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| | |||  ||||||||||||||| ||| || |||||||||||||| ||||||||    
T  6763843 atacaccctccggtcactaatataagcaaaaatccattttctagattcattcaattaatgatgt 6763780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 13654634 - 13654591
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||  ||||| ||||||||||||||||||||    
T  13654634 tataagcaaaaattcactttttaaattcattcaataaatgatgt 13654591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 15712115 - 15712178
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||| ||| | |||| ||||||||||||||| ||| |||||||| |||||||| ||||||||    
T  15712115 atacactctccggtcattaatataagcaaaaatccattttttagatacattcaattaatgatgt 15712178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 1180803 - 1180757
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||| | ||||||| |||||||||||||| ||||    
T  1180803 aaatataagcaaaaatttacgttttaggttcattcaataaataatgt 1180757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 19531446 - 19531384
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||| |||| |||||  ||||||||||||||||||  |||||||| |||||||| ||||||||    
T  19531446 tacatcctccgatcactaatataagcaaaaattcactttttagatacattcaattaatgatgt 19531384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 42013951 - 42013905
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||||||||  |||||||| |||||||| ||||||||    
T  42013951 aaatataagcaaaaattcactttttagatacattcaattaatgatgt 42013905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 11262340 - 11262385
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||  |||||||| |||||||| ||||||||    
T  11262340 aatataagcaaaaattcactttttagatacattcaattaatgatgt 11262385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 11262456 - 11262411
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||| || ||||| |||||||| ||||||||    
T  11262456 aatataagcaaaaattcattttgtagatacattcaattaatgatgt 11262411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 37944614 - 37944659
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||  |||||||| |||||||| ||||||||    
T  37944614 aatataagcaaaaattcactttttagatacattcaattaatgatgt 37944659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 37944730 - 37944685
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||||| || |||||||| |||||||| ||||||||    
T  37944730 aatataagcaaaaatttattttttagatacattcaattaatgatgt 37944685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 38835537 - 38835582
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||| |||||||| |||| ||| ||||||||    
T  38835537 aatataagcaaaaattcattttttagatacatttaattaatgatgt 38835582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 42013834 - 42013879
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||  |||||||| |||||||| ||||||||    
T  42013834 aatataagcaaaaattcactttttagatacattcaattaatgatgt 42013879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 26045279 - 26045319
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatga 216  Q
    |||||||||||||| || ||||||||||||||||| |||||    
T  26045279 tataagcaaaaatttatattttagattcattcaattaatga 26045319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 26300104 - 26300168
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| | |||  |||||||||||||||| |  |||||||| |||||||| ||||||||    
T  26300104 catacaccctccggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgt 26300168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 40100213 - 40100169
Alignment:
Q  176 tataagcaaaaattcatgtttt-agattcattcaataaatgatgt 219  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||    
T  40100213 tataagcaaaaattcatttttttagattcattcagtaaatgatgt 40100169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 14308653 - 14308716
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  14308653 atacaccctccgatcacaaatataagcaaacattcatgttttagattcattcaataaatgatgt 14308716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 3124049 - 3123986
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||| |||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3124049 atacatcctccggtcacaaatataagcaaaaattcatgttttagattcattcaataaatgatgt 3123986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 14308791 - 14308729
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  14308791 tacaccctccgatcacaaatataagcaaaaaatcatattttagattcattcaataaatgatgt 14308729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 27881231 - 27881294
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||   ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  27881231 atacaccctccagtcacaaatataagcaaaaattcatgttttatattcattcaataaatgatgt 27881294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 18356057 - 18356106
Alignment:
Q  170 cataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  18356057 cataaatataaacaaaatttcatgttttagattcattcaataaatgatgt 18356106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 3123897 - 3123960
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||| || | |||||||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  3123897 atacaccatccggtcataaatataaacaaaagttcatattttagattcattcaataaatgatgt 3123960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 10222118 - 10222055
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| | ||| |||||||||||||||||||| ||||| | ||||||||||||||||||    
T  10222118 atacaccctcaggtcacaaatataagcaaaaattcatattttaaaatcattcaataaatgatgt 10222055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 10221967 - 10222029
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| | ||| || ||||| ||||||||||||||||| ||||||||||||||||||||    
T  10221967 tacaccctccggtcacaattataaacaaaaattcatgttttatattcattcaataaatgatgt 10222029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 17866309 - 17866263
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  17866309 aaatataagcaaaaatccatgttttagattcattcaataaattatgt 17866263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 45035928 - 45035866
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| | ||| ||||||||||||||||  |||||||||||||| ||||||||||||||    
T  45035928 tacaccctccggtcacaaatataagcaaaaatatatgttttagattcactcaataaatgatgt 45035866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 44274668 - 44274624
Alignment:
Q  175 atataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||||||  ||||||||||||||||||||||||||    
T  44274668 atataagcaaaaattcactttttagattcattcaataaatgatgt 44274624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 12242386 - 12242323
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| | ||| |||||||||||||| | ||| ||||||||||||||| ||||||||||    
T  12242386 atacaccctccggtcacaaatataagcaaaattccatattttagattcattcattaaatgatgt 12242323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 26836283 - 26836240
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  26836283 aatataagcaaaaatccatattttagattcattcaataaatgat 26836240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 41824275 - 41824318
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||    
T  41824275 tataagcaaaaattcattttttagattcattcaataaattatgt 41824318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 3887827 - 3887888
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    ||||||||||||||||  |||||||||||||||  || |||||||| |||||||| ||||||    
T  3887827 atacaccctctgatcactaatataagcaaaaatctattttttagatacattcaattaatgat 3887888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 43426774 - 43426713
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    |||||||||| | |||| |||||||||||||||| || |||||||| |||||||| ||||||    
T  43426774 atacaccctccggtcattaatataagcaaaaatttattttttagatacattcaattaatgat 43426713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 44089418 - 44089483
Alignment:
Q  154 tcatacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||| |||||  | ||||||||||||| ||| ||||| ||||||| ||||||||||||    
T  44089418 tcatacaccctccgatcactattataagcaaaaatacatcttttatattcattgaataaatgatgt 44089483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 27881366 - 27881322
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||    
T  27881366 aaatataagcaaaaatcaatgttttaggttcattcaataaatgat 27881322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 12242254 - 12242297
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||    
T  12242254 tataagcaaaaaaccatattttagattcattcaataaatgatgt 12242297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 34248561 - 34248498
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||| |||  ||||||||||||||| ||  |||||||| |||||||| ||||||||    
T  34248561 atacaccctctggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgt 34248498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 41056882 - 41056945
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||| ||||||||  | |||||||||||||  ||||||||||| |||||| ||||||||||    
T  41056882 atacaccatctgatcactattataagcaaaaatcaatgttttagatacattcattaaatgatgt 41056945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 17866175 - 17866237
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| | ||| |||| |||||||||||  ||||||||| |||||| ||||||||||||    
T  17866175 tacaccctccggtcacaaatctaagcaaaaatcaatgttttaggttcatttaataaatgatgt 17866237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 18356177 - 18356132
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||||||    
T  18356177 aaatataaacaaaaattcatgttttaaattca-tcaataaatgatgt 18356132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 23378087 - 23378025
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| | |||| | |||||||||||||| || ||||||||||||| | ||||||||||    
T  23378087 tacaccctccggtcattattataagcaaaaattaatattttagattcatttattaaatgatgt 23378025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 30902285 - 30902330
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||| ||||| || |||||||| ||||||||    
T  30902285 aatataagcaaaaattcattttttaaatacattcaattaatgatgt 30902330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 34248427 - 34248472
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||  |||||||| |||||||| ||||||||    
T  34248427 aatataagcaaaaattcactttttagatacattcaattaatgatgt 34248472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 38594491 - 38594427
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| | |||  |||||||||||||||  || |||||||| |||||||| ||||||||    
T  38594491 catacaccctccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgt 38594427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 3012493 - 3012443
Alignment:
Q  169 tcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3012493 tcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 3012443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 13276479 - 13276543
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  13276479 catacaccctccggtcacaaatataagcaaaaattcatgttttaggttcattcaataaatgatgt 13276543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 7158251 - 7158313
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||| ||||||||||||||||  |||||||||||| ||||||||||||||||    
T  7158251 tacaccctctgatcacaaatataagcaaaaatctatgttttagatttattcaataaatgatgt 7158313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 7158401 - 7158339
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||    
T  7158401 tacaccctccgatcataaatattagcaaaagttcatattttagattcattcaataaatgatgt 7158339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 15836685 - 15836622
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| | ||| ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  15836685 atacaccctccggtcacaaatataagtaaaaatacatgttttagattcattcaataaatgatgt 15836622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 13277171 - 13277105
Alignment:
Q  153 atcatacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||| | ||| |||||||| |||||||| || ||||||||||||||||||||||||||    
T  13277171 atcatacaccctccggtcacaaatataaacaaaaatttatattttagattcattcaataaatgatgt 13277105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 15836546 - 15836596
Alignment:
Q  169 tcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||    
T  15836546 tcataaatataagcaaaaattcatattgtagattcattcaataaatgatgt 15836596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 33053758 - 33053822
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| | ||| ||||||||| ||||||  |||||||||||||||||||||||||||||    
T  33053758 catacaccctccggtcacaaatataagaaaaaatctatgttttagattcattcaataaatgatgt 33053822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 8030461 - 8030398
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||| ||| || ||||||||||||||||||||| || ||||| ||||||||||||||| ||||    
T  8030461 atacatcctttggtcataaatataagcaaaaatttatcttttaaattcattcaataaataatgt 8030398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 15718539 - 15718476
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||  | ||||||||||||||||  ||| | ||||||||||||||||||||    
T  15718539 atacaccctctgatcactattataagcaaaaattcacttttaaaattcattcaataaatgatgt 15718476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 33018939 - 33018997
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaat 214  Q
    ||||| |||| ||||| ||||||||| |||||||||| ||||||||||||| |||||||    
T  33018939 atacatcctccgatcacaaatataagtaaaaattcatattttagattcatttaataaat 33018997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 2990547 - 2990608
Alignment:
Q  153 atcatacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaat 214  Q
    |||||| |||||| | |||||||||||||||||||||||| ||||| |||| || |||||||    
T  2990547 atcatataccctccggtcataaatataagcaaaaattcatattttaaattcgtttaataaat 2990608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 21998032 - 21998096
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| |||||  ||||||||||||||| ||| |||||||| |||||||| ||| ||||    
T  21998032 catacaccctccgatcactaatataagcaaaaatacattttttagatacattcaattaataatgt 21998096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 33053883 - 33053848
Alignment:
Q  184 aaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||||||| |||||||||||||||||    
T  33053883 aaaattcatgttttagatacattcaataaatgatgt 33053848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 3012371 - 3012417
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||  |||||||||  ||||||||||||||||||    
T  3012371 aaatataagcaaaaatcaatgttttaggatcattcaataaatgatgt 3012417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 4808271 - 4808317
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| ||||||| ||||||||| |||||| ||||||||||||    
T  4808271 aaatataagaaaaaattaatgttttaggttcattaaataaatgatgt 4808317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 8449561 - 8449631
Alignment:
Q  149 ataaatcatacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||| |||||||| || |||||  | |||||||||||||| || |||| |||| ||||||||||||||||    
T  8449561 ataaaacatacaccatccgatcactattataagcaaaaattaatattttggatttattcaataaatgatgt 8449631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 8449702 - 8449660
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatg 218  Q
    |||||||||||||| || ||||||||||||||||| |||||||    
T  8449702 tataagcaaaaattaatattttagattcattcaattaatgatg 8449660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 8458365 - 8458435
Alignment:
Q  149 ataaatcatacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||| |||||||| || |||||  | |||||||||||||| || |||| |||| ||||||||||||||||    
T  8458365 ataaaacatacaccatccgatcactattataagcaaaaattaatattttggatttattcaataaatgatgt 8458435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 8458506 - 8458464
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatg 218  Q
    |||||||||||||| || ||||||||||||||||| |||||||    
T  8458506 tataagcaaaaattaatattttagattcattcaattaatgatg 8458464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 32254966 - 32254904
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| |||||  | ||||||||||| || || ||||||||||||||| ||||||||||    
T  32254966 tacaccctccgatcactattataagcaaaagttaatattttagattcattcattaaatgatgt 32254904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 4844301 - 4844346
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||| |||| |||||||| |||||||| ||||||||    
T  4844301 aatataagcaaaaaatcattttttagatacattcaattaatgatgt 4844346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 18886322 - 18886363
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    |||||||||||||| || ||||||||||||||| ||||||||    
T  18886322 tataagcaaaaattaatattttagattcattcattaaatgat 18886363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 14031816 - 14031752
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||| || ||||| || |||||| ||||||  || ||||||||||||||||| ||||||||    
T  14031816 catacaccatccgatcacaattataagtaaaaatctatattttagattcattcaattaatgatgt 14031752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 54508164 - 54508226
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  54508164 tacaccctccgatcataaatataagcaaaaatttatattttagattcattcaataaatgatgt 54508226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 4370395 - 4370457
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| ||||| |||||||||||||||| ||| ||||||||||||||||||||||||||    
T  4370395 tacaccctccgatcacaaatataagcaaaaatccatattttagattcattcaataaatgatgt 4370457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 52674963 - 52674902
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    |||||||||||| ||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  52674963 atacaccctctggtcacaaatataagcaaaaatgtatgttttagattcattcaataaatgat 52674902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 20598268 - 20598314
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  20598268 aaatataagcaaaaattcatgttttagatacattcaataaatgatgt 20598314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 54106486 - 54106532
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  54106486 aaatataagcaaaaattcatattttagattcattcaataaatgatgt 54106532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 54106604 - 54106558
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  54106604 aaatataagcaaaaatttatgttttagattcattcaataaatgatgt 54106558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 41905933 - 41905872
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    |||||||||  | ||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  41905933 atacacccttcggtcacaaatataagcaaaaattcatgttttaggttcattcaataaatgat 41905872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 20598402 - 20598342
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    ||||||||| | ||| |||||||| ||||||| ||||||||||||||||||||||||||||    
T  20598402 tacaccctccggtcacaaatataaacaaaaatccatgttttagattcattcaataaatgat 20598342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 5535708 - 5535771
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||| |||||||||||  | |||||||||||| |||| ||||||||||||||||||||||||||    
T  5535708 atactccctctgatcactagtataagcaaaaactcattttttagattcattcaataaatgatgt 5535771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 16040111 - 16040044
Alignment:
Q  151 aaatcatacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||| ||||||||||   ||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  16040111 aaattatacaccctccagtcataaatataagcaaaaatttat-ttttaaattcattcaataaatgatgt 16040044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 54922259 - 54922323
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| | | ||||||||||| |||||||||| |||||||| |||||||||||| ||||    
T  54922259 catacaccctccggttataaatataagaaaaaattcatattttagatacattcaataaataatgt 54922323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 19934784 - 19934721
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| |||||  | |||||||||||||  || ||||||||||||||||||||||||||    
T  19934784 atacaccctccgatcactattataagcaaaaatctattttttagattcattcaataaatgatgt 19934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 33558942 - 33558880
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| | ||| | ||||||||||||||  |||||||||||| ||||||||||||||||    
T  33558942 tacaccctccggtcacatatataagcaaaaatatatgttttagatttattcaataaatgatgt 33558880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 3504089 - 3504134
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  3504089 aatataaacaaaaattcattttttagattcattcaattaatgatgt 3504134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 4370542 - 4370475
Alignment:
Q  160 accctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgtgatgatgtc 228  Q
    |||||| | ||| ||||||||| |||||||||| ||||||||| || ||||||||||||| ||||||||    
T  4370542 accctccggtcacaaatataagtaaaaattcatattttagatttatgcaataaatgatgt-atgatgtc 4370475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 33558792 - 33558852
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    ||||||||| | ||| |||||||| ||||||||||| ||||||||| || |||||||||||    
T  33558792 tacaccctccggtcacaaatataaccaaaaattcatattttagatttatacaataaatgat 33558852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 11796710 - 11796667
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||    
T  11796710 tataagcaaaaattcactttttagatttattcaataaatgatgt 11796667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 26636566 - 26636523
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||| ||||||| || ||||||||||||||||||||||||||    
T  26636566 tataagtaaaaatttattttttagattcattcaataaatgatgt 26636523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 29006849 - 29006892
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||  || ||||||||||||||||||||||||||    
T  29006849 tataagcaaaaatctattttttagattcattcaataaatgatgt 29006892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 35005181 - 35005138
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||  ||||||||||||||||||||| ||||    
T  35005181 tataagcaaaaattcaatttttagattcattcaataaataatgt 35005138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 52914124 - 52914081
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||| || ||||||||||||||| ||||||||||    
T  52914124 tataagcaaaaattaatattttagattcattcattaaatgatgt 52914081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 54164939 - 54164896
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||  || ||||||||||||||||||||||||||    
T  54164939 tataagcaaaaatctattttttagattcattcaataaatgatgt 54164896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 22020109 - 22020171
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    ||||| ||||||| |||  | ||||||||||| ||||  ||||||||||||||||||||||||    
T  22020109 catactccctctggtcactattataagcaaaagttcactttttagattcattcaataaatgat 22020171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 27537051 - 27537113
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||| |||||| |||| | |||||||||||||| |  ||||||||||||||| ||||||||||    
T  27537051 tacatcctctggtcattattataagcaaaaatttacattttagattcattcattaaatgatgt 27537113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 13689664 - 13689619
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||  ||||||||||||||||| ||| ||||    
T  13689664 aatataagcaaaaattcactttttagattcattcaattaataatgt 13689619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 19595564 - 19595523
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    ||||||||||| ||||  ||||||||||||||||||||||||    
T  19595564 tataagcaaaatttcacattttagattcattcaataaatgat 19595523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 20215683 - 20215642
Alignment:
Q  178 taagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| || || ||||||||||||||||||||||||||    
T  20215683 taagcaaaagttgatattttagattcattcaataaatgatgt 20215642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 24941123 - 24941168
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||  |||||||| |||||||| ||||||||    
T  24941123 aatataagcaaaaattcactttttagatacattcaattaatgatgt 24941168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 44239912 - 44239867
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||| |||||||| |||||||| |||||| |||||||||||||    
T  44239912 aatataaacaaaaatttatgttttaaattcatccaataaatgatgt 44239867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 51736226 - 51736267
Alignment:
Q  178 taagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||| || | ||||||||||||||||||||||||    
T  51736226 taagcaaaaattaatatattagattcattcaataaatgatgt 51736267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 54922395 - 54922354
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaat 214  Q
    ||||||||| |||||| |||||||| ||||||||||||||||    
T  54922395 aaatataagtaaaaatacatgttttggattcattcaataaat 54922354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 28001748 - 28001784
Alignment:
Q  184 aaaattcatgttttagattcattcaataaatgatgtg 220  Q
    |||||| |||||||||||||||| |||||||||||||    
T  28001748 aaaattaatgttttagattcatttaataaatgatgtg 28001784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 54338952 - 54338916
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataa 212  Q
    |||||||||||||| || |||||||||||||||||||    
T  54338952 tataagcaaaaatttattttttagattcattcaataa 54338916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 26367465 - 26367528
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  26367465 atacaccctccggtcacaaatataagcaaaaatccatgttttagattcattcaataaatgatgt 26367528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 4980267 - 4980328
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    ||||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4980267 atacatcctctagtcataaatataagcaaaaattcatattttagattcattcaataaatgat 4980328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 2128487 - 2128444
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2128487 tataagcaaaaattcatgttttagattcattcaataaatgatgt 2128444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 26367608 - 26367558
Alignment:
Q  169 tcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  26367608 tcataaatataagcaaaaatcaatgttttagattcattcaataaatgatgt 26367558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 27707171 - 27707233
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    |||||| |||| ||||| |||||||||||||||||||| ||||| ||||||||||||||||||    
T  27707171 catacatcctccgatcacaaatataagcaaaaattcatattttaaattcattcaataaatgat 27707233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 7981140 - 7981201
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatg 218  Q
    ||||| ||||| ||| |||||||||||||||||||| |||||| ||||||||||||||||||    
T  7981140 tacactctctggtcacaaatataagcaaaaattcatattttaggttcattcaataaatgatg 7981201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 31706618 - 31706670
Alignment:
Q  167 gatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||| |||||||||||||||||||| |||||||||||||||||| |||||||    
T  31706618 gatcacaaatataagcaaaaattcatattttagattcattcaatatatgatgt 31706670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 35572146 - 35572087
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatg 215  Q
    ||||||| || | ||||||||||||||||||||||||||||| | |||||||||||||||    
T  35572146 atacaccatccggtcataaatataagcaaaaattcatgttttgggttcattcaataaatg 35572087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 4980398 - 4980356
Alignment:
Q  177 ataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  4980398 ataagcaaaaattcatattttagattcattcaataaatgatgt 4980356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 27707323 - 27707261
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||| |||| ||||| ||||||||||| |||| | ||||||||||||||||||||||||||||    
T  27707323 tacatcctccgatcacaaatataagcagaaatacgtgttttagattcattcaataaatgatgt 27707261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 5919426 - 5919490
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaa-ttcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| | ||| ||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  5919426 atacaccctccggtcacaaatataagcaaaaaattcgtattttagattcattcaataaatgatgt 5919490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 35572011 - 35572056
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatg 218  Q
    |||||||| ||||||||||| |||||||||||||||||||| ||||    
T  35572011 aaatataatcaaaaattcatattttagattcattcaataaacgatg 35572056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 7981274 - 7981230
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||    
T  7981274 aaatataagcaaaaatttatattttagatttattcaataaatgat 7981230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 1086635 - 1086592
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||| |||||||||  ||||||||||||||||||||||||||    
T  1086635 tataagtaaaaattcactttttagattcattcaataaatgatgt 1086592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 10872798 - 10872755
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||| || ||||||||||||||||| ||||||||    
T  10872798 tataagcaaaaatttatattttagattcattcaattaatgatgt 10872755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 22496965 - 22497008
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||| || ||||||||||||||| ||||||||||    
T  22496965 tataagcaaaaattaatattttagattcattcattaaatgatgt 22497008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 29720277 - 29720234
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  29720277 aatataagcaaaaattcattttttagatgcattcaattaatgat 29720234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 42787741 - 42787698
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||| ||||||||||| |||||| |||||||||||||||||||    
T  42787741 tataaacaaaaattcattttttaggttcattcaataaatgatgt 42787698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 13900242 - 13900284
Alignment:
Q  176 tataagcaaaaattca-tgttttagattcattcaataaatgat 217  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  13900242 tataagcaaaaattcacttttttagattcattcaataaatgat 13900284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 31706742 - 31706696
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||| || ||||||||||| |||||||||| |||||    
T  31706742 aaatataagcaaaaaatcttgttttagatttattcaataaacgatgt 31706696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 52931653 - 52931698
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||||||||  ||||||| |||||||| ||||||||    
T  52931653 aatataagcaaaaattcattctttagatacattcaattaatgatgt 52931698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 50466818 - 50466870
Alignment:
Q  167 gatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||| | |||||| ||||||| || ||||||||||||||||| ||||||||    
T  50466818 gatcattattataagtaaaaatttatattttagattcattcaattaatgatgt 50466870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 51239390 - 51239326
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| | |||  |||||||||||||||  || |||||||| |||||||| ||||||||    
T  51239390 catacaccctccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgt 51239326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 31417646 - 31417600
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  31417646 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 31417600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 44416529 - 44416589
Alignment:
Q  159 caccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||| | |||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  44416529 caccctccggtcataaatataaacaaaaattcatgttttagattcattcaatgaatgatgt 44416589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 14996008 - 14995949
Alignment:
Q  159 caccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatg 218  Q
    ||||||||| ||| |||||||||||||||||||| |||||||||| ||||||||||||||    
T  14996008 caccctctggtcacaaatataagcaaaaattcatattttagattcgttcaataaatgatg 14995949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 15051229 - 15051166
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| | ||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  15051229 atacaccctccggtcacaaatataagcaaaaattcatgttttaaattcattcaataaataatgt 15051166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 15051078 - 15051140
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| | ||| ||||||||||||||||| ||||||||||| |||||||||||||||||    
T  15051078 tacaccctccggtcacaaatataagcaaaaatttatgttttagatacattcaataaatgatgt 15051140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 22752567 - 22752617
Alignment:
Q  169 tcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||||| || ||||||||||||||||||||| ||||    
T  22752567 tcataaatataagcaaaaatttatattttagattcattcaataaataatgt 22752617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 29779703 - 29779771
Alignment:
Q  150 taaatcatacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||| ||||||||||| | ||| |||||||| ||||||||||| || |||||||||||||||||||||||    
T  29779703 taaaacatacaccctcgg-tcacaaatataaacaaaaattcatattatagattcattcaataaatgatgt 29779771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 35216482 - 35216531
Alignment:
Q  168 atcataaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    ||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  35216482 atcataaatataaacaaaaatttatattttagattcattcaataaatgat 35216531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 14995860 - 14995920
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    ||||||||| | ||| ||||||||||||||||  |||||||| ||||||||||||||||||    
T  14995860 tacaccctccggtcacaaatataagcaaaaatcaatgttttaaattcattcaataaatgat 14995920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 8595141 - 8595204
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| | ||| ||||||||| ||||||| || ||||||||||||||| ||||||||||    
T  8595141 atacaccctccggtcacaaatataagaaaaaatttattttttagattcattcattaaatgatgt 8595204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 21886461 - 21886524
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| | |||| | |||||||||||||| || ||||||||||||||||| ||||||||    
T  21886461 atacaccctccggtcattattataagcaaaaatttatattttagattcattcaattaatgatgt 21886524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 22106813 - 22106750
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||  ||||||| ||||| ||||| |||||||| |||||||| ||||||||    
T  22106813 atacaccctctgatcactaatataaacaaaatttcattttttagatacattcaattaatgatgt 22106750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 40529538 - 40529601
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||  ||||||| ||||| ||||| |||||||| |||||||| ||||||||    
T  40529538 atacaccctctgatcactaatataaacaaaatttcattttttagatacattcaattaatgatgt 40529601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 44416678 - 44416615
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||| ||| |||||||||||||| |||||||| || ||||||||||||||||| ||| ||||    
T  44416678 atacactctccgatcataaatataaacaaaaatttatattttagattcattcaattaattatgt 44416615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 27242536 - 27242498
Alignment:
Q  180 agcaaaaattcatgttttagattcattcaataaatgatg 218  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  27242536 agcaaaaatccatgttttagattcattcaataaatgatg 27242498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 34703591 - 34703526
Alignment:
Q  154 tcatacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||| | |||  ||||||||||||||||||  |||||||| |||||||| ||||||||    
T  34703591 tcatacaccctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgt 34703526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 31417351 - 31417407
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaa 213  Q
    |||| |||| ||||||| |||| || ||||||||||||||||||| |||||||||||    
T  31417351 tacatcctccgatcatatatattagaaaaaattcatgttttagatacattcaataaa 31417407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 34840628 - 34840671
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||    
T  34840628 tataagcaaaagttcactttttagattcattcaataaatgatgt 34840671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 1706961 - 1706916
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||| |||||||| |||||| | ||||||||    
T  1706961 aatataagcaaaaattcattttttagatacattcatttaatgatgt 1706916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 21387588 - 21387633
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||| ||| || |||||||||||||| ||||||||    
T  21387588 aatataagcaaaaatccattttctagattcattcaattaatgatgt 21387633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 29779843 - 29779798
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatg 218  Q
    ||||||||||||||||| ||||||||  |||||| |||||||||||    
T  29779843 aaatataagcaaaaatttatgttttatgttcatttaataaatgatg 29779798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 40416901 - 40416962
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatg 218  Q
    ||||||||| | |||| ||||||||||||||||||   ||||||| |||||||| |||||||    
T  40416901 tacaccctccggtcattaatataagcaaaaattcacaatttagatacattcaattaatgatg 40416962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 40417034 - 40416989
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||  |||||||| |||||||| ||||||||    
T  40417034 aatataagcaaaaattcactttttagatacattcaattaatgatgt 40416989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 6455537 - 6455605
Alignment:
Q  150 taaatcatacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatg 218  Q
    |||| ||||||||||| |||||  | |||||||||||||| |  ||||||||||||||| | |||||||    
T  6455537 taaaacatacaccctccgatcactattataagcaaaaatttacattttagattcattcatttaatgatg 6455605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 10422954 - 10422894
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatga 216  Q
    |||||||||| | |||  |||||||||||||||| |  ||||||||||||||| |||||||    
T  10422954 atacaccctccggtcactaatataagcaaaaatttaatttttagattcattcattaaatga 10422894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 22752707 - 22752643
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| | | | ||||||||| ||||||  | |||||||||||||||||||||| ||||    
T  22752707 catacaccctccggttacaaatataagaaaaaatataggttttagattcattcaataaattatgt 22752643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 32549940 - 32549904
Alignment:
Q  183 aaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||| || ||||||||||||||||||||||||||    
T  32549940 aaaaattgatattttagattcattcaataaatgatgt 32549904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 43813139 - 43813179
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatga 216  Q
    |||||||||||||| |  |||||||||||||||||||||||    
T  43813139 tataagcaaaaatttaatttttagattcattcaataaatga 43813179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 29424126 - 29424066
Alignment:
Q  159 caccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||| | ||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  29424126 caccctccggtcacaaatataagcaaaaattcatattttagattcattcaataaatgatgt 29424066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 21435803 - 21435752
Alignment:
Q  169 tcataaatataagcaaaaa-ttcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  21435803 tcataaatataagcaaaaagttcatattttagattcattcaataaatgatgt 21435752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 15936198 - 15936260
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||| |||| ||||||||||||||||||||| || ||||| ||| ||||||||||||||||    
T  15936198 tacaccatctggtcataaatataagcaaaaatttatattttatattaattcaataaatgatgt 15936260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 7223952 - 7223896
Alignment:
Q  160 accctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatga 216  Q
    |||||| | ||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  7223952 accctccggtcacaaatataagcaaaaattcatattttaaattcattcaataaatga 7223896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 7428906 - 7428949
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  7428906 tataagcaaaaattcatattttaggttcattcaataaatgatgt 7428949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 8506363 - 8506300
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||| ||| | ||| |||||||| |||||||| |||||||||||||||||||||||| ||||    
T  8506363 atacactctccggtcacaaatataaacaaaaatttatgttttagattcattcaataaataatgt 8506300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 9056015 - 9056078
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| | ||| |||||||||||||||||||  |||||||| |||||||| ||||||||    
T  9056015 atacaccctccggtcacaaatataagcaaaaattcactttttagatacattcaattaatgatgt 9056078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 24419006 - 24418963
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||  ||||||||||||||||||||||||||    
T  24419006 tataagcaaaaattcactttttagattcattcaataaatgatgt 24418963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 5888350 - 5888393
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||| | |||||||||||||||| ||||||||||    
T  5888350 tataagcaaaaattaacgttttagattcattcattaaatgatgt 5888393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 24820423 - 24820380
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||||   ||||||||||||||||||||||||||    
T  24820423 tataagcaaaaattctctttttagattcattcaataaatgatgt 24820380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 8506229 - 8506270
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatg 215  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  8506229 aaatataagcaaaaattcgtgttt-agattcattcaataaatg 8506270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 15936332 - 15936286
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||||||||||  || ||||| ||||||||||    
T  15936332 aaatataagcaaaaattcatgttttaagttgattcagtaaatgatgt 15936286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 45407113 - 45407067
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||| |||||||||| ||||||||| ||| ||||||||||||||||    
T  45407113 aaatacaagcaaaaatccatgttttaaattaattcaataaatgatgt 45407067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 6260735 - 6260694
Alignment:
Q  176 tataagcaaaaattcatgtttt-agattcattcaataaatga 216  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  6260735 tataagcaaaaattcatttttttagattcattcaataaatga 6260694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 7429012 - 7428975
Alignment:
Q  182 caaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||| || ||||||||||||||||||||||||||    
T  7429012 caaaaatttatattttagattcattcaataaatgatgt 7428975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 13211233 - 13211294
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    |||||||||||| |||| |||||||| ||||||| || |||||||| |||| ||| ||||||    
T  13211233 atacaccctctggtcattaatataagtaaaaatttattttttagatacatttaattaatgat 13211294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 26014581 - 26014626
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||||  |||||||| |||||||| ||||||||    
T  26014581 aatataagcaaaaattcactttttagatacattcaattaatgatgt 26014626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 29423994 - 29424035
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaat 214  Q
    |||| |||||||||||| || |||||||||||||||||||||    
T  29423994 aaatgtaagcaaaaatttatattttagattcattcaataaat 29424035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 3e-16; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 15351857 - 15351798
Alignment:
Q  160 accctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||| ||| ||||||||||||||||  |||||||||||||||||||||||||||||    
T  15351857 accctctggtcacaaatataagcaaaaatctatgttttagattcattcaataaatgatgt 15351798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 1741620 - 1741661
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaat 214  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1741620 aaatataagcaaaaattcatgttttagattcattcaataaat 1741661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 15351708 - 15351772
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| | ||| ||||||||||||||||| || ||||| ||||||||||||||||||||    
T  15351708 catacaccctccggtcacaaatataagcaaaaatttatattttaaattcattcaataaatgatgt 15351772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 38468679 - 38468743
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| | |||||||||||||| ||| || |||||||||||||||||||||||| ||||    
T  38468679 catacaccctccggtcataaatataagctaaattttatgttttagattcattcaataaataatgt 38468743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 8984203 - 8984245
Alignment:
Q  177 ataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  8984203 ataagcaaaaaatcatgttttagattcattcaataaatgatgt 8984245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 8984335 - 8984273
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    ||||||||||| | | | |||||||||||||||||| | ||||||||||||||||||||||||    
T  8984335 catacaccctccggtgacaaatataagcaaaaattcgtattttagattcattcaataaatgat 8984273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 21444198 - 21444256
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaat 214  Q
    ||||||||||  ||||||||||||||||||||| ||| ||||||||||||| |||||||    
T  21444198 atacaccctccaatcataaatataagcaaaaatacatattttagattcatttaataaat 21444256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 26937872 - 26937918
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  26937872 aaatataagcaaaaattcatattttaaattcattcaataaatgatgt 26937918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 7037946 - 7037905
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaat 214  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  7037946 aaatataagcaaaaatccatgttttagattcattcaataaat 7037905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 23944025 - 23944094
Alignment:
Q  150 taaatcatacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||| ||||||||||| | |||  ||||||||||||||||||| |||||||| |||||||| ||||||||    
T  23944025 taaaacatacaccctccggtcactaatataagcaaaaattcattttttagatacattcaattaatgatgt 23944094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 26938007 - 26937948
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatg 215  Q
    |||||| ||||| |||||||||||| |||||||| |||||||| ||||||| ||||||||    
T  26938007 atacacgctctggtcataaatataaacaaaaatttatgttttaaattcattaaataaatg 26937948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 3384218 - 3384280
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| | |||| ||||||||||||||||||  |||||||| |||||||| ||||||||    
T  3384218 tacaccctccggtcattaatataagcaaaaattcactttttagatacattcaattaatgatgt 3384280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 14958692 - 14958738
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||    
T  14958692 aaatataagcaaaacttcaaattttagattcattcaataaatgatgt 14958738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 43318143 - 43318093
Alignment:
Q  167 gatcataaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    |||||||| ||||||||| ||||||| ||||||||||||| ||||||||||    
T  43318143 gatcataattataagcaagaattcattttttagattcatttaataaatgat 43318093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 5431468 - 5431423
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||    
T  5431468 aatataagcaaaaattaactttttagattcattcaataaatgatgt 5431423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 14958810 - 14958765
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatg 218  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||||    
T  14958810 aaatataagaaaaaattcattttttagatttattcaataaatgatg 14958765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 1811322 - 1811278
Alignment:
Q  175 atataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||||||| ||||||||||||| ||||| ||||||    
T  1811322 atataagcaaaaattcattttttagattcattaaataattgatgt 1811278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 5431355 - 5431395
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatga 216  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  5431355 tataagcaaaaattcactttttagattcattcaataaatga 5431395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 14418204 - 14418140
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| | |||| ||||||||||||||||||  |||||||| |||||||  ||||||||    
T  14418204 catacaccctccggtcattaatataagcaaaaattcactttttagatacattcaactaatgatgt 14418140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 34954039 - 34953979
Alignment:
Q  159 caccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||| |||||  | |||||||||||||| || ||||||||||||||||| ||||||||    
T  34954039 caccctccgatcactattataagcaaaaatttatattttagattcattcaattaatgatgt 34953979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 51022731 - 51022775
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgtg 220  Q
    ||||||||||| || || |||||||||||||||||||||||||||    
T  51022731 tataagcaaaagttgatattttagattcattcaataaatgatgtg 51022775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 1035881 - 1035944
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||| || |||||  ||||||||||||||| ||  || |||||||||||||||||||||||    
T  1035881 atacaccatccgatcactaatataagcaaaaatccagtttctagattcattcaataaatgatgt 1035944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 10256795 - 10256838
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||| |||||||||  ||||||||||||||||||||||||||    
T  10256795 tataagaaaaaattcactttttagattcattcaataaatgatgt 10256838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 31008405 - 31008342
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||| | |||| ||||||||||||||| ||  |||||||| |||||||| ||||||||    
T  31008405 atacaccctccggtcattaatataagcaaaaatccactttttagatacattcaattaatgatgt 31008342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 34597534 - 34597577
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||  |||||||||||||||| |||||||||    
T  34597534 tataagcaaaaattcactttttagattcattcaacaaatgatgt 34597577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 34597639 - 34597596
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||  |||||||||||||||| |||||||||    
T  34597639 tataagcaaaaattcactttttagattcattcaacaaatgatgt 34597596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 38834625 - 38834668
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||| || ||||||||||||| ||||||||||||    
T  38834625 tataagcaaaaatttattttttagattcattaaataaatgatgt 38834668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 42660371 - 42660414
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| || || ||||||||||||||||||||||||||    
T  42660371 tataagcaaaagttgattttttagattcattcaataaatgatgt 42660414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 48083498 - 48083561
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||| |||  | |||||||||||||| || |||||| |||||||| ||||||||||    
T  48083498 atacaccctctggtcactattataagcaaaaattaatattttaggttcattcattaaatgatgt 48083561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 8257938 - 8258000
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| | ||| |||||||||||||||||||  |||||||| |||||||| ||| ||||    
T  8257938 tacaccctccggtcacaaatataagcaaaaattcactttttagatacattcaattaataatgt 8258000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 8258088 - 8258026
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| | |||  ||||||||||||||||||  |||||||| |||||||| ||||||||    
T  8258088 tacaccctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgt 8258026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 38468815 - 38468769
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| |||||||||| |||||||| |||| ||||||||||||    
T  38468815 aaatataagaaaaaattcatattttagatacatttaataaatgatgt 38468769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 3549935 - 3549862
Alignment:
Q  146 atcataaatcatacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||| | ||||| |||||||||| | |||||||||||||| |  ||||| ||||||||| ||||| ||||    
T  3549935 atcataaaacttacactctctgatcattattataagcaaaaattaacattttaaattcattcattaaataatgt 3549862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 46412717 - 46412758
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    |||||||||||||| || ||||||||||||||| ||||||||    
T  46412717 tataagcaaaaattaatattttagattcattcattaaatgat 46412758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 1036032 - 1035972
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgat 217  Q
    ||||||||| | |||  ||||||||||||||||||  || |||||||||||||| ||||||    
T  1036032 tacaccctccggtcactaatataagcaaaaattcactttctagattcattcaattaatgat 1035972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 13048674 - 13048714
Alignment:
Q  179 aagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| || ||||||||||||||||| ||||||||    
T  13048674 aagcaaaaattaatattttagattcattcaattaatgatgt 13048714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 13053671 - 13053711
Alignment:
Q  179 aagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| || ||||||||||||||||| ||||||||    
T  13053671 aagcaaaaattaatattttagattcattcaattaatgatgt 13053711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 31325929 - 31325897
Alignment:
Q  183 aaaaattcatgttttagattcattcaataaatg 215  Q
    |||||||||| ||||||||||||||||||||||    
T  31325929 aaaaattcatattttagattcattcaataaatg 31325897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 33604138 - 33604074
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| | |||  ||||||||||||||| ||  |||||||| |||||||| ||||||||    
T  33604138 catacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgt 33604074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 42915659 - 42915703
Alignment:
Q  174 aatataagcaaaaattcatgttttagattcattcaataaatgatg 218  Q
    ||||||||||||| || || |||||| ||||||||||||||||||    
T  42915659 aatataagcaaaagttgattttttaggttcattcaataaatgatg 42915703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 43728312 - 43728268
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgtg 220  Q
    |||||||||||||| || ||||||||||||| ||| |||||||||    
T  43728312 tataagcaaaaattaatattttagattcattaaattaatgatgtg 43728268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 52923316 - 52923380
Alignment:
Q  155 catacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||| | |||  | ||||||||||| ||||  |||||| |||||||||||||||||||    
T  52923316 catacaccctccggtcactattataagcaaaatttcactttttaggttcattcaataaatgatgt 52923380  T

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Target: scaffold0024 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 100116 - 100054
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||| | |||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  100116 tacaccctccggtcataaatataagcattaattcatgttttaaattcattcaataaatgatgt 100054  T

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Target: scaffold0024; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 120133 - 120202
Alignment:
Q  150 taaatcatacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||| |||||||||| | |||  ||||||||||||| ||||  |||||||| |||||||| ||||||||    
T  120133 taaataatacaccctccggtcactaatataagcaaaatttcactttttagatacattcaattaatgatgt 120202  T

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Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 17362 - 17318
Alignment:
Q  173 aaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||    
T  17362 aaatataagcaaaaat--atgttttagattcattcaataaatgatgt 17318  T

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Target: scaffold0149 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 24732 - 24689
Alignment:
Q  176 tataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||||| || ||||||||||||||| ||||||||||    
T  24732 tataagcaaaaattaatattttagattcattcattaaatgatgt 24689  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 246941 - 246878
Alignment:
Q  156 atacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatgatgt 219  Q
    |||||||||||| |||| |||||||||||||||  |  |||||||| |||||||| ||||||||    
T  246941 atacaccctctggtcattaatataagcaaaaatctactttttagatacattcaattaatgatgt 246878  T

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Target: scaffold0536 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 4095 - 4037
Alignment:
Q  157 tacaccctctgatcataaatataagcaaaaattcatgttttagattcattcaataaatg 215  Q
    ||||||||||| |||  |||||||||||||||| |  |||||||| |||||||||||||    
T  4095 tacaccctctggtcactaatataagcaaaaatttactttttagatacattcaataaatg 4037  T

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