View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14500_high_17 (Length: 239)
Name: NF14500_high_17
Description: NF14500
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14500_high_17 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 32566885 - 32566652
Alignment:
| Q |
1 |
ctttagattgagaaagtgtctgctgtgtgttgcggcgtacactcacatgacagtgacacatgtgattacatacaattgcttctattttctaaaatcattg |
100 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
32566885 |
ctttagactgagaaagtgtctgctgtgtgttgcggcgtacactcacatgacagtgacacatgtgattacatacaattgcttctattttctaaaattattg |
32566786 |
T |
|
| Q |
101 |
ctgctcggacactttagaggagtttaatcttaaacatataataaataactctacatgattggttcatattagatttaagtaaaactaattttgatcttac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
32566785 |
ctgctcggacactttagaggagtttaatcttaaacatataataaataactctacatgattggttcatattagatttaagtaaaactaatgttgatcttac |
32566686 |
T |
|
| Q |
201 |
atgttgacattacacaaaattagttcatctcact |
234 |
Q |
| |
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|||||||||||||||||||||||||||| ||||| |
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|
| T |
32566685 |
atgttgacattacacaaaattagttcatttcact |
32566652 |
T |
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