View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14501_high_2 (Length: 601)
Name: NF14501_high_2
Description: NF14501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14501_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 544; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 544; E-Value: 0
Query Start/End: Original strand, 1 - 592
Target Start/End: Original strand, 32223645 - 32224243
Alignment:
| Q |
1 |
caccaccacactaacccctatgcaattaaacttaactctggtttactcactccccattcacatacagccacattcatagtcatacacatcactaactata |
100 |
Q |
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| T |
32223645 |
caccaccacactaacccctatgcaattaaacttaactctggtttactcactccccattcacatacagccacattcatagtcatacacatcactaactata |
32223744 |
T |
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| Q |
101 |
cctagcaattaagctacattatcatcattcaaagaaaaagccaaaacaaaattaaaacaaccaatgaatccggacataacatttggttcatattcacaag |
200 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
32223745 |
cctagcaattaagctacattatcattattcaaagaaaaagccaaaacaaaattaaaacaaccaatgaatccggtcataacatttggttcatattcacaag |
32223844 |
T |
|
| Q |
201 |
tatatgtatgtatgta-------ctatagttgagagactaataacttaacttacccattacccataacccatttacagctaagaacttgtcatgnnnnnn |
293 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32223845 |
tatatgtatgtatgtatgtactactatagttgagagactaataacttaacttacccattacccataacccatttacagctaagaacttgtcatgaaaaaa |
32223944 |
T |
|
| Q |
294 |
ntatcatgatggtaaaagtaaagggagaggattgaatacagattgcacaaatgtcataaaaatgtttcactgttttcacaaaaatccttgttgttgctaa |
393 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32223945 |
atatcatgatggtaaaagtaaagggagaggattgaatacagattgcacaaatgtcataaaaatgtttcactgttttcacaaaaatccttgttgttgctaa |
32224044 |
T |
|
| Q |
394 |
aaatagaacaaaaaacagaatcatccatccactactcaactttcacttcttccactcaactagttacaccattgatctgttttattaacaccaaacccaa |
493 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32224045 |
aaatagaacaaaaaacagaatcatccatccactactcaactttcacttcttccactcaactagttacaccattgatctgttttattaacaccaaacccaa |
32224144 |
T |
|
| Q |
494 |
aacccatttcgtgattgccgagcgtcgttcatattatctgcacaaacactcagaaccaaagagagagaaagagaaagtagatagatagcaatgatgatg |
592 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32224145 |
aacccatttcgtgattgccgagcgtcgttcatattatctgcacaaacactcagaaccaaagagagagaaagagaaagtagatagatagcaatgatgatg |
32224243 |
T |
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