View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14501_high_8 (Length: 284)

Name: NF14501_high_8
Description: NF14501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14501_high_8
NF14501_high_8
[»] chr4 (55 HSPs)
chr4 (13-171)||(54783177-54783335)
chr4 (172-259)||(39786527-39786614)
chr4 (172-259)||(18360144-18360231)
chr4 (172-259)||(36602697-36602784)
chr4 (172-259)||(3901310-3901397)
chr4 (172-259)||(4209366-4209453)
chr4 (172-284)||(19731311-19731423)
chr4 (172-259)||(23255938-23256025)
chr4 (172-259)||(46212521-46212608)
chr4 (172-259)||(46803634-46803721)
chr4 (172-257)||(5744256-5744341)
chr4 (174-259)||(6494593-6494678)
chr4 (172-259)||(3442515-3442602)
chr4 (172-259)||(5123328-5123415)
chr4 (176-259)||(7738990-7739073)
chr4 (172-259)||(28166277-28166364)
chr4 (172-259)||(45198511-45198598)
chr4 (172-259)||(47579290-47579377)
chr4 (174-257)||(55190887-55190970)
chr4 (172-257)||(4264137-4264222)
chr4 (172-257)||(5735274-5735359)
chr4 (172-257)||(19634021-19634106)
chr4 (175-259)||(50033026-50033110)
chr4 (175-259)||(50035545-50035629)
chr4 (172-259)||(26205875-26205962)
chr4 (172-259)||(28151994-28152081)
chr4 (172-259)||(49768448-49768535)
chr4 (174-259)||(37688204-37688289)
chr4 (200-259)||(3443558-3443617)
chr4 (172-259)||(21859090-21859177)
chr4 (172-259)||(21914953-21915040)
chr4 (178-252)||(55014271-55014345)
chr4 (186-259)||(1377049-1377122)
chr4 (188-257)||(19631327-19631396)
chr4 (174-259)||(20678758-20678843)
chr4 (186-259)||(39260302-39260375)
chr4 (220-257)||(55997165-55997202)
chr4 (191-259)||(19525885-19525953)
chr4 (174-258)||(19652427-19652511)
chr4 (191-284)||(26659862-26659955)
chr4 (195-259)||(53568380-53568444)
chr4 (175-258)||(19170711-19170794)
chr4 (39-94)||(54789255-54789310)
chr4 (191-257)||(6923113-6923179)
chr4 (191-257)||(25644381-25644447)
chr4 (186-259)||(42187150-42187223)
chr4 (13-94)||(52281838-52281919)
chr4 (197-252)||(23603825-23603880)
chr4 (172-239)||(39195672-39195739)
chr4 (219-256)||(27976744-27976781)
chr4 (172-204)||(4209585-4209617)
chr4 (172-204)||(18359976-18360008)
chr4 (172-204)||(23603650-23603682)
chr4 (172-204)||(36602920-36602952)
chr4 (172-204)||(50971654-50971686)
[»] chr2 (35 HSPs)
chr2 (172-258)||(32776072-32776158)
chr2 (172-259)||(9877254-9877341)
chr2 (172-259)||(18718242-18718329)
chr2 (172-257)||(34826915-34827000)
chr2 (172-259)||(7443062-7443149)
chr2 (172-259)||(14372080-14372167)
chr2 (172-259)||(23671379-23671466)
chr2 (172-259)||(41463688-41463775)
chr2 (172-258)||(38963522-38963608)
chr2 (172-259)||(14707705-14707792)
chr2 (172-259)||(40425420-40425507)
chr2 (172-259)||(42038526-42038613)
chr2 (172-257)||(27559578-27559663)
chr2 (176-257)||(44330391-44330472)
chr2 (172-259)||(3987403-3987490)
chr2 (188-259)||(13399276-13399347)
chr2 (192-259)||(30708751-30708818)
chr2 (188-259)||(40898659-40898730)
chr2 (172-259)||(41172928-41173015)
chr2 (186-259)||(24283129-24283202)
chr2 (186-259)||(36199122-36199195)
chr2 (208-257)||(43925254-43925303)
chr2 (172-259)||(4045853-4045940)
chr2 (172-259)||(20517422-20517509)
chr2 (188-259)||(38137701-38137772)
chr2 (172-259)||(44283450-44283537)
chr2 (172-257)||(4045406-4045491)
chr2 (186-259)||(16941982-16942055)
chr2 (186-259)||(17012647-17012720)
chr2 (172-257)||(40598131-40598216)
chr2 (172-259)||(332281-332366)
chr2 (174-254)||(4083212-4083292)
chr2 (220-259)||(30776364-30776403)
chr2 (176-247)||(38588072-38588143)
chr2 (219-259)||(7106328-7106368)
[»] scaffold0366 (2 HSPs)
scaffold0366 (172-259)||(14062-14149)
scaffold0366 (172-259)||(10396-10483)
[»] chr8 (32 HSPs)
chr8 (172-259)||(1580936-1581023)
chr8 (172-259)||(6470848-6470935)
chr8 (172-259)||(40013654-40013741)
chr8 (172-259)||(13138303-13138390)
chr8 (172-259)||(29790945-29791032)
chr8 (172-257)||(38845203-38845288)
chr8 (172-259)||(30289927-30290014)
chr8 (172-259)||(45081815-45081902)
chr8 (174-259)||(43066132-43066217)
chr8 (175-259)||(44123679-44123763)
chr8 (172-259)||(2805647-2805734)
chr8 (172-259)||(3293273-3293360)
chr8 (172-259)||(8351051-8351138)
chr8 (197-259)||(12893559-12893621)
chr8 (186-259)||(14522397-14522470)
chr8 (172-257)||(37709902-37709987)
chr8 (172-257)||(38739660-38739745)
chr8 (172-284)||(45253752-45253865)
chr8 (172-259)||(30380533-30380620)
chr8 (188-258)||(886239-886309)
chr8 (186-259)||(23248794-23248867)
chr8 (192-259)||(2986362-2986428)
chr8 (188-255)||(9302528-9302595)
chr8 (187-254)||(14847228-14847295)
chr8 (39-94)||(19295295-19295350)
chr8 (220-257)||(18809327-18809364)
chr8 (220-257)||(31127978-31128015)
chr8 (224-259)||(10658033-10658068)
chr8 (220-259)||(25256385-25256424)
chr8 (220-259)||(39361176-39361215)
chr8 (230-259)||(6470784-6470813)
chr8 (172-204)||(14522605-14522637)
[»] chr5 (36 HSPs)
chr5 (172-259)||(4925009-4925096)
chr5 (172-259)||(29627271-29627358)
chr5 (172-259)||(35290289-35290376)
chr5 (172-259)||(37516147-37516234)
chr5 (176-258)||(14475406-14475488)
chr5 (186-259)||(43517231-43517304)
chr5 (172-284)||(30779891-30780003)
chr5 (172-259)||(35448168-35448255)
chr5 (186-258)||(37843747-37843819)
chr5 (175-284)||(42421691-42421800)
chr5 (172-259)||(5213093-5213180)
chr5 (188-259)||(19889673-19889744)
chr5 (172-259)||(23988582-23988669)
chr5 (172-259)||(38697966-38698053)
chr5 (172-259)||(39036413-39036500)
chr5 (172-259)||(40512851-40512938)
chr5 (172-259)||(42148310-42148397)
chr5 (172-258)||(41411330-41411416)
chr5 (172-259)||(5364423-5364510)
chr5 (172-255)||(32334815-32334898)
chr5 (172-258)||(1830657-1830743)
chr5 (172-258)||(40316124-40316210)
chr5 (172-259)||(39894784-39894871)
chr5 (188-257)||(15268129-15268198)
chr5 (220-259)||(32002185-32002224)
chr5 (191-257)||(4300005-4300071)
chr5 (191-257)||(16048105-16048171)
chr5 (172-257)||(39405767-39405852)
chr5 (175-259)||(2863960-2864044)
chr5 (174-254)||(43067234-43067314)
chr5 (191-257)||(970160-970226)
chr5 (188-254)||(19087946-19088012)
chr5 (197-284)||(19868831-19868918)
chr5 (191-257)||(22613882-22613948)
chr5 (220-252)||(25563551-25563583)
chr5 (172-204)||(39036636-39036668)
[»] chr3 (38 HSPs)
chr3 (176-259)||(46483558-46483641)
chr3 (172-259)||(25097358-25097445)
chr3 (174-259)||(7459991-7460076)
chr3 (172-256)||(34827325-34827409)
chr3 (172-284)||(3547566-3547678)
chr3 (172-259)||(38492055-38492142)
chr3 (172-257)||(15503028-15503113)
chr3 (172-257)||(18659055-18659140)
chr3 (186-259)||(32285347-32285420)
chr3 (176-257)||(45167306-45167387)
chr3 (172-256)||(45093723-45093807)
chr3 (174-258)||(49057861-49057945)
chr3 (176-259)||(8559176-8559259)
chr3 (176-259)||(9145509-9145592)
chr3 (172-259)||(10571315-10571402)
chr3 (172-259)||(27848955-27849042)
chr3 (172-259)||(29728269-29728356)
chr3 (172-259)||(37832903-37832990)
chr3 (192-259)||(38833687-38833754)
chr3 (172-259)||(43137854-43137941)
chr3 (192-259)||(51062413-51062480)
chr3 (172-254)||(54840304-54840386)
chr3 (172-257)||(21906999-21907084)
chr3 (186-259)||(47638072-47638145)
chr3 (186-259)||(51392463-51392536)
chr3 (172-257)||(53066378-53066462)
chr3 (172-259)||(1327314-1327401)
chr3 (188-259)||(7671484-7671555)
chr3 (188-259)||(28690535-28690606)
chr3 (172-255)||(52668660-52668743)
chr3 (177-259)||(10437290-10437372)
chr3 (172-257)||(4238793-4238878)
chr3 (188-257)||(36665038-36665107)
chr3 (188-259)||(35718026-35718097)
chr3 (220-259)||(48707014-48707053)
chr3 (191-257)||(10435156-10435222)
chr3 (191-257)||(17052886-17052952)
chr3 (220-257)||(32951309-32951346)
[»] chr7 (30 HSPs)
chr7 (173-259)||(48531326-48531412)
chr7 (192-259)||(23474140-23474207)
chr7 (172-259)||(36819699-36819786)
chr7 (172-259)||(19072772-19072859)
chr7 (172-259)||(31466529-31466616)
chr7 (172-259)||(32619113-32619200)
chr7 (172-259)||(36859379-36859466)
chr7 (172-259)||(42086809-42086896)
chr7 (186-259)||(21392035-21392108)
chr7 (174-259)||(44479891-44479976)
chr7 (172-259)||(2400288-2400375)
chr7 (172-259)||(28185579-28185666)
chr7 (172-259)||(37951116-37951203)
chr7 (172-259)||(47080983-47081070)
chr7 (172-259)||(47713673-47713760)
chr7 (172-259)||(31110627-31110712)
chr7 (188-284)||(31497849-31497945)
chr7 (172-259)||(34478182-34478269)
chr7 (172-259)||(36905529-36905616)
chr7 (172-257)||(10464288-10464373)
chr7 (172-257)||(37231737-37231822)
chr7 (186-259)||(47537940-47538013)
chr7 (172-259)||(42834463-42834550)
chr7 (220-257)||(35500920-35500957)
chr7 (220-257)||(36643213-36643250)
chr7 (188-244)||(38198500-38198556)
chr7 (175-257)||(4033297-4033379)
chr7 (219-257)||(39982287-39982325)
chr7 (219-259)||(18795311-18795351)
chr7 (172-204)||(48531548-48531580)
[»] scaffold0459 (1 HSPs)
scaffold0459 (172-259)||(12755-12842)
[»] scaffold0051 (1 HSPs)
scaffold0051 (172-259)||(41388-41475)
[»] chr6 (17 HSPs)
chr6 (172-259)||(643602-643689)
chr6 (188-258)||(13207125-13207195)
chr6 (172-258)||(33121545-33121631)
chr6 (172-257)||(31854821-31854906)
chr6 (172-259)||(30237168-30237256)
chr6 (176-259)||(24150748-24150831)
chr6 (176-257)||(22020283-22020364)
chr6 (172-259)||(11114568-11114655)
chr6 (172-259)||(18991907-18991994)
chr6 (172-259)||(25435415-25435501)
chr6 (194-259)||(29986329-29986394)
chr6 (175-259)||(29403650-29403734)
chr6 (191-259)||(7098044-7098112)
chr6 (186-259)||(20662230-20662303)
chr6 (175-259)||(8796056-8796140)
chr6 (220-256)||(25163215-25163251)
chr6 (188-259)||(19068939-19069010)
[»] chr1 (36 HSPs)
chr1 (172-259)||(25531781-25531868)
chr1 (172-259)||(48219813-48219900)
chr1 (172-256)||(16751627-16751711)
chr1 (172-259)||(3529179-3529266)
chr1 (172-259)||(32565749-32565836)
chr1 (172-259)||(39354435-39354522)
chr1 (172-259)||(48264982-48265069)
chr1 (172-259)||(50539263-50539350)
chr1 (172-259)||(52378992-52379079)
chr1 (172-257)||(32988522-32988607)
chr1 (174-259)||(38458734-38458819)
chr1 (172-259)||(30529221-30529308)
chr1 (172-255)||(48376161-48376244)
chr1 (172-284)||(50481281-50481393)
chr1 (172-259)||(50876367-50876454)
chr1 (172-258)||(23569846-23569932)
chr1 (172-257)||(26441640-26441725)
chr1 (191-259)||(47222236-47222304)
chr1 (188-255)||(38738153-38738220)
chr1 (192-259)||(45235016-45235083)
chr1 (185-259)||(31971558-31971632)
chr1 (172-254)||(49805428-49805510)
chr1 (173-254)||(4605002-4605083)
chr1 (172-257)||(16266165-16266250)
chr1 (186-259)||(29161859-29161932)
chr1 (186-259)||(37281109-37281182)
chr1 (176-259)||(42708511-42708594)
chr1 (191-257)||(16265055-16265121)
chr1 (220-257)||(43680120-43680157)
chr1 (220-259)||(1849750-1849789)
chr1 (172-284)||(14075738-14075850)
chr1 (220-259)||(41501779-41501818)
chr1 (191-257)||(24982373-24982439)
chr1 (220-257)||(3898744-3898781)
chr1 (220-257)||(23330503-23330540)
chr1 (188-284)||(23340812-23340906)
[»] scaffold0092 (1 HSPs)
scaffold0092 (172-259)||(44279-44366)
[»] scaffold0027 (1 HSPs)
scaffold0027 (172-252)||(117324-117404)
[»] scaffold0111 (1 HSPs)
scaffold0111 (220-259)||(38531-38570)


Alignment Details
Target: chr4 (Bit Score: 143; Significance: 4e-75; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 54783335 - 54783177
Alignment:
Q  13 cacagatagcatgacaaataaagttctctcttttccgtaagagaagcccggtcccacatcccctcacattttactctgatcgctgcccttcccgacgagc 112  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  54783335 cacagatagcatgacaaataaagttatctcttttccgtaagagaagcccggtcccacataccctcacattttactctgatcgctgcccttcccgacgagc 54783236  T
Q  113 aactcttccctagtaaagttaaagaataatgaatatttgcttattcacatccttaaata 171  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  54783235 aactcttccctagtaaagttaaagaataatgaatacttgcttattcacatccttcaata 54783177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 39786614 - 39786527
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||    
T  39786614 tccctccgtccctcaatagatgacctagttgactctgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctact 39786527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 18360231 - 18360144
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||||||||||||||||||||||  |||| |  |||||||| |||||||||||||||||||||||||||||||    
T  18360231 tccctccgtccctcaatagatgacctagttgactctgacgcacgtaccaatgcatatgttttatctttgatatcttcaattctctact 18360144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 36602697 - 36602784
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||||||||||||||||||||||  |||| |  |||||||| |||||||||||||||||||||||||||||||    
T  36602697 tccctccgtccctcaatagatgacctagttgactctgacgcacgtaccaatgcatatgttttatctttgatatcttcaattctctact 36602784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 3901397 - 3901310
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  3901397 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 3901310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 4209366 - 4209453
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||||||| |||||||||||||| ||||| |  ||| |||| |||||||||||||||||||||||||||||||    
T  4209366 tccctccgtccctcaatagatgatctagttgactctgacacacgtaccaatacatatgttttatctttgatatcttcaattctctact 4209453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 284
Target Start/End: Complemental strand, 19731423 - 19731311
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctactnnnnnnnttatg 271  Q
    ||||| |||||| || ||||||||||||||||||| || ||||| |  |||||||| ||||||||||||||||||||||| |||||||       |||||    
T  19731423 tcccttcgttccatattagatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaatgctctactaaaacaattatg 19731324  T
Q  272 aaaatttaatatt 284  Q
    |||||||||||||    
T  19731323 aaaatttaatatt 19731311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 23255938 - 23256025
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||| |  ||||||||  |||||| |||||||||||||||||||||||    
T  23255938 tccctccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatattttatatttgatatcttcaattctctact 23256025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 46212608 - 46212521
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  46212608 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 46212521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 46803634 - 46803721
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  46803634 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 46803721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 257
Target Start/End: Complemental strand, 5744341 - 5744256
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  || |||| ||| |||||||||||||||||||||||||||||    
T  5744341 tccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgtatatgttttatctttgatatcttcaattctcta 5744256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 6494593 - 6494678
Alignment:
Q  174 cctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||| ||| |||| ||||||||||||||||||| ||||  || |||||||| ||||||||||| |||||||||||||||||||    
T  6494593 cctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatatgttttatctttaatatcttcaattctctact 6494678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 3442602 - 3442515
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||| ||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  3442602 tccctccgtccctaaataaatgacatagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 3442515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 5123415 - 5123328
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||| | ||| |||||||||| ||||||||||||| ||||| |  |||||||| |||||||||||||||||||||||| ||||||    
T  5123415 tccctccatccctcaatagatgacttagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattatctact 5123328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 7739073 - 7738990
Alignment:
Q  176 tccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||| ||| |||| |||||||||||||||| || ||||| || |||||||| |||||||||||||||| ||||||||||||||    
T  7739073 tccgtccctaaataaatgacctagttgactccgacacacgtatcaatgcatatgttttatctttgatatattcaattctctact 7738990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 28166277 - 28166364
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| |||| |||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  28166277 tccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 28166364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 45198598 - 45198511
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| |||| |||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  45198598 tccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 45198511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 47579290 - 47579377
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||| | ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  47579290 tccctccgtccctaaataaatgacctagttgactcttacacacataccaatgcatatgttttatctttgatatcttcaattctctact 47579377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 55190970 - 55190887
Alignment:
Q  174 cctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||| ||| |||||||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||| ||||    
T  55190970 cctccgtccctcaatagatgacctagttgactctgacacacttaccaatgcatatgttttatctttgatatcttcaattatcta 55190887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 4264137 - 4264222
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||| ||||    
T  4264137 tccctccgtccctcaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattatcta 4264222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 5735274 - 5735359
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| ||| |||| |||| |||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||    
T  5735274 tccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 5735359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 257
Target Start/End: Complemental strand, 19634106 - 19634021
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||| ||| ||||||||||||| ||||||||||| || ||||| |  ||| |||| |||||||||||||||||||||||||||||    
T  19634106 tcccttcgtcccttaatagatgatctagttgactccgacacacgtaccaattcatatgttttatctttgatatcttcaattctcta 19634021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 50033026 - 50033110
Alignment:
Q  175 ctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||| || || |||||||| |||||||||| || ||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  50033026 ctccgtcccatattagatgacttagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 50033110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 50035545 - 50035629
Alignment:
Q  175 ctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||| || || ||||||| ||||||||||| || ||||| || |||||||| ||||||||||||| |||||||||||||||||    
T  50035545 ctccgtcccatattagatgatctagttgactccgacacacgtatcaatgcatatgttttatctttgaaatcttcaattctctact 50035629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 26205962 - 26205875
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| |||| |||||||||||| | ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  26205962 tccctccgtccctaaataaatgatctagttgactcttacacacataccaatgcatatgttttatctttgatatcttcaattctctact 26205875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 28151994 - 28152081
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| | | |||| ||||||||||||||||||| ||||  |  |||||||| ||||||| |||||||||||||||||||||||    
T  28151994 tccctccgtccttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatatttgatatcttcaattctctact 28152081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 49768448 - 49768535
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||| ||||||||| ||| | ||  || |||||||| |||||||||||||||||||||||||||||||    
T  49768448 tccctccgtccctaaataaatgacttagttgactatgacatacatatcaatgcatatgttttatctttgatatcttcaattctctact 49768535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 37688289 - 37688204
Alignment:
Q  174 cctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||| ||| |||| |||| |||| ||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  37688289 cctccgtccctaaataaatgatctagatgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 37688204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 3443617 - 3443558
Alignment:
Q  200 ttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||| ||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  3443617 ttgactctgacacacgtacaaatgcatatgttttatctttgatatcttcaattctctact 3443558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 21859177 - 21859090
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| || |||||||||||||||| ||||  |  ||| |||| |||||||||||||||| ||||||||||||||    
T  21859177 tccctccgtccctaaataaataacctagttgactctgacacacataccaatacatatgttttatctttgatattttcaattctctact 21859090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 21915040 - 21914953
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| || |||||||||||||||| ||||  |  ||| |||| |||||||||||||||| ||||||||||||||    
T  21915040 tccctccgtccctaaataaataacctagttgactctgacacacataccaatacatatgttttatctttgatattttcaattctctact 21914953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 55014271 - 55014345
Alignment:
Q  178 cgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaatt 252  Q
    |||||| || ||||| ||||||||||||| || ||||| | ||||||||| |||||||||||||||| |||||||    
T  55014271 cgttccatattagataacctagttgactccgacacacgtactaatgcatatgttttatctttgatatattcaatt 55014345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 1377049 - 1377122
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||| ||||| ||||||||| ||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  1377049 aataaatgacgtagttgactatgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 1377122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 19631327 - 19631396
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||||||| || ||||||| || ||||| |  |||||||| |||||||||||||||||||||||||||||    
T  19631327 tagatgacttaattgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 19631396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 20678843 - 20678758
Alignment:
Q  174 cctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||| ||| |||| |||| |||||||||||||| |||   || ||||||||  ||||||||||||||| ||||||||||||||    
T  20678843 cctccgtccctaaataaatgatctagttgactctgacacatatatcaatgcatatattttatctttgatattttcaattctctact 20678758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 39260375 - 39260302
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| |||||||||||||| ||| | |  ||| ||||  ||||||||||||||||||||||||||||||    
T  39260375 aatagatgatctagttgactctgacacatgtaccaatacatatattttatctttgatatcttcaattctctact 39260302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 55997165 - 55997202
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||||||||||||||||||||||||||||||||    
T  55997165 aatgcatacgttttatctttgatatcttcaattctcta 55997202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 19525953 - 19525885
Alignment:
Q  191 atgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||||||||  || ||||| |  |||||||| |||||||||||||||||||||||||| ||||    
T  19525953 atgacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctttact 19525885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 19652511 - 19652427
Alignment:
Q  174 cctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctac 258  Q
    ||||||| ||| |||| |||| ||||||||||| || | ||| |  ||| |||| ||||||||||||||||||||||||||||||    
T  19652511 cctccgtccctcaatatatgatctagttgactccgacatacgtaccaattcatatgttttatctttgatatcttcaattctctac 19652427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 26659862 - 26659955
Alignment:
Q  191 atgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctactnnnnnnnttatgaaaatttaatatt 284  Q
    |||||||||||||||| || ||| | || | |||||| |||||| |||||||||||||||||||||| |       ||||||||||||||||||    
T  26659862 atgacctagttgactccgacacatgtatcactgcatatgttttagctttgatatcttcaattctctaataaaaaaattatgaaaatttaatatt 26659955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 53568380 - 53568444
Alignment:
Q  195 cctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||||| || ||||  || |||||||| |||||||||||||||||||||||||| ||||    
T  53568380 cctagttgactccgacacacatatcaatgcatatgttttatctttgatatcttcaattctttact 53568444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 19170794 - 19170711
Alignment:
Q  175 ctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctac 258  Q
    |||||| ||| ||||||||||||||||||||  || ||| | |  ||||||||  |||||||||| ||||||||||||||||||    
T  19170794 ctccgtccctcaatagatgacctagttgacttcgacacatgtaccaatgcatatattttatctttaatatcttcaattctctac 19170711  T

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Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 54789255 - 54789310
Alignment:
Q  39 tctcttttccgtaagagaagcccggtcccacatcccctcacattttactctgatcg 94  Q
    |||||||| ||||||||||| |||||||||||| | ||||||||| ||||||||||    
T  54789255 tctctttttcgtaagagaagtccggtcccacatacactcacatttcactctgatcg 54789310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 6923179 - 6923113
Alignment:
Q  191 atgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||| ||||||||||  || ||||| |  |||||||| |||||||||||||||||||||||||||||    
T  6923179 atgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 6923113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 25644381 - 25644447
Alignment:
Q  191 atgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||| ||||||||||  || ||||| |  |||||||| |||||||||||||||||||||||||||||    
T  25644381 atgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 25644447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 42187223 - 42187150
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||  ||||||||||||| | ||| |  ||||||||  |||||||||||||||||| |||||||||||    
T  42187223 aatagatgatttagttgactctgacatacgtaccaatgcatatattttatctttgatatctttaattctctact 42187150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 52281838 - 52281919
Alignment:
Q  13 cacagatagcatgacaaataaagttctctcttttccgtaagagaagcccggtcccacatcccctcacattttactctgatcg 94  Q
    ||||||||||| || | | |||||| ||||||||  |||||||||||| |||||||| || ||||||| | |||||||||||    
T  52281838 cacagatagcaggatacagaaagttttctcttttttgtaagagaagccaggtcccacgtcacctcacactctactctgatcg 52281919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 23603880 - 23603825
Alignment:
Q  197 tagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaatt 252  Q
    ||||||||||||| ||||| |  |||||||  ||||||||||||||||||||||||    
T  23603880 tagttgactctgacacacgtaccaatgcatctgttttatctttgatatcttcaatt 23603825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 39195739 - 39195672
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatcttt 239  Q
    ||||| ||| ||||| |||||||||||||||||||||| ||||  || ||||||||  ||||||||||    
T  39195739 tcccttcgtcccttattagatgacctagttgactctgacacacatatcaatgcatattttttatcttt 39195672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 27976781 - 27976744
Alignment:
Q  219 taatgcatacgttttatctttgatatcttcaattctct 256  Q
    ||||||||| ||||||||||| ||||||||||||||||    
T  27976781 taatgcatatgttttatctttaatatcttcaattctct 27976744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 4209617 - 4209585
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgac 204  Q
    ||||||||| |||||||||||||||||||||||    
T  4209617 tccctccgtcccttaatagatgacctagttgac 4209585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 18359976 - 18360008
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgac 204  Q
    ||||||||| |||||||||||||||||||||||    
T  18359976 tccctccgtcccttaatagatgacctagttgac 18360008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 23603650 - 23603682
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgac 204  Q
    ||||||||||||| |||||||||||||||||||    
T  23603650 tccctccgttcctcaatagatgacctagttgac 23603682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 36602952 - 36602920
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgac 204  Q
    ||||||||| |||||||||||||||||||||||    
T  36602952 tccctccgtcccttaatagatgacctagttgac 36602920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 50971686 - 50971654
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgac 204  Q
    ||||||||| |||||||||||||||||||||||    
T  50971686 tccctccgtcccttaatagatgacctagttgac 50971654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 258
Target Start/End: Complemental strand, 32776158 - 32776072
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctac 258  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| |  |||||||| ||||||||||||||||||||||||||||||    
T  32776158 tccctccgtcccttaatagatgacctagttgactccgatacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 32776072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 9877341 - 9877254
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||  | |||||||| ||||||||||||||||||| |||||||||||    
T  9877341 tccctccgtccctcaatagatgacctagttgactctgacacacgtgtgaatgcatatgttttatctttgatatctttaattctctact 9877254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 18718242 - 18718329
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  || |||||||| |||||||||||||||||||||||||||||||    
T  18718242 tccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatatgttttatctttgatatcttcaattctctact 18718329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 34826915 - 34827000
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  | ||||||||| |||||||||||||||||||||||||||||    
T  34826915 tccctccgtccctaaataaatgacctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcaattctcta 34827000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 7443149 - 7443062
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||  |||||||||||||||||| ||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  7443149 tccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 7443062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 14372080 - 14372167
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  14372080 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 14372167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 23671379 - 23671466
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  23671379 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 23671466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 41463775 - 41463688
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| |||||||||||||||| || ||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  41463775 tccctccgtccctcaataaatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 41463688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 258
Target Start/End: Original strand, 38963522 - 38963608
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctac 258  Q
    |||||||||||||||||||||||||||||| |||  || ||||| |  |||||||| |||||||||||||| |||||||||||||||    
T  38963522 tccctccgttccttaatagatgacctagttaacttcgacacacgtaccaatgcatatgttttatctttgatttcttcaattctctac 38963608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 14707792 - 14707705
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||| ||||    
T  14707792 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctttact 14707705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 40425507 - 40425420
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||| ||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  40425507 tccctccgtccctaaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 40425420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 42038526 - 42038613
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||  |||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  42038526 tccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 42038613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 27559578 - 27559663
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| ||| |||| |||| |||||||||||||| ||||  || |||| ||| |||||||||||||||||||||||||||||    
T  27559578 tccctccgtccctaaataaatgatctagttgactctgacacacatatcaatgtatatgttttatctttgatatcttcaattctcta 27559663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 44330391 - 44330472
Alignment:
Q  176 tccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||| | |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||    
T  44330391 tccgttcttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 44330472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 3987490 - 3987403
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| |||| |||||||||||||| ||||  |  ||| |||| |||||||||||||||||||||||||||||||    
T  3987490 tccctccgtccctaaataaatgatctagttgactctgacacacataccaatacatatgttttatctttgatatcttcaattctctact 3987403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 13399347 - 13399276
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||| ||||||||||||||||| | |  |||||||||||||||| ||| |||||||||||||||||||    
T  13399347 tagatgacttagttgactctgatacatgtaccaatgcatacgttttattttttatatcttcaattctctact 13399276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 30708751 - 30708818
Alignment:
Q  192 tgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||||||| ||| ||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  30708751 tgacctagttgactttgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 30708818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 40898659 - 40898730
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||| ||||||||||| || ||||| | ||||| ||| |||||||||||||||||||||||||||||||    
T  40898659 tagatgatctagttgactccgacacacgtactaatgtatatgttttatctttgatatcttcaattctctact 40898730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 41173015 - 41172928
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| |||||||| |||||||||| ||||  |  |||||||| |||||||||||||||||||||||| ||||||    
T  41173015 tccctccgtccctaaataaatgacctacttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattttctact 41172928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 24283202 - 24283129
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||||||||||  || || ||||| | | ||||||| |||||||||||||||||||||||||||||||    
T  24283202 aatagatgacctagttgtttccgacacacgtactgatgcatatgttttatctttgatatcttcaattctctact 24283129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 36199195 - 36199122
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||| |||| |||||||||||||| ||||  | ||||||||| |||||||||||||||||||| ||||||||||    
T  36199195 aataaatgatctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcgattctctact 36199122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 43925303 - 43925254
Alignment:
Q  208 gatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  43925303 gatacacgaactaatgcatatgttttatctttgatatcttcaattctcta 43925254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 4045853 - 4045940
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||| ||||| |||||||||  ||||||| ||||| | ||| | ||||||||| ||||||||||||||||||| |||| ||||||    
T  4045853 tccctccattcctcaatagatgatttagttgattctgacatacgtactaatgcatatgttttatctttgatatctttaattttctact 4045940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 20517422 - 20517509
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||  || |||| ||||| || |||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  20517422 tccctccgtctctaaataaatgacataattgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 20517509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 38137772 - 38137701
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||| ||||||||||| || ||||| |  |||||||| ||||||||||||||||||||||||| |||||    
T  38137772 tagatgatctagttgactccgacacacgtacaaatgcatatgttttatctttgatatcttcaattccctact 38137701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 44283537 - 44283450
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| | | |||| ||||||||||||| ||||| ||||  |  ||||||||  ||||||||||||||||||||||||||||||    
T  44283537 tccctccgtccttaaataaatgacctagttgattctgacacacataccaatgcatatattttatctttgatatcttcaattctctact 44283450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 257
Target Start/End: Complemental strand, 4045491 - 4045406
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| ||| |||| ||||  | ||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||    
T  4045491 tccctccgtccctaaataaatgatttggttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 4045406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 16942055 - 16941982
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||| |||| |||||||||||||| ||||  |  |||||||| |||||||||||||||| ||||||||||||||    
T  16942055 aataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatattcaattctctact 16941982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 17012720 - 17012647
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||| |||| |||||||||||||| ||||  |  |||||||| |||||||||||||||| ||||||||||||||    
T  17012720 aataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatattcaattctctact 17012647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 40598131 - 40598216
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| || || || |||| ||||||||||  || ||||| |  |||||||| |||||||||||||||||||||||||||||    
T  40598131 tccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 40598216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 332281 - 332366
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| || || ||||||||||| ||||||| ||  |||| |  || ||||| |||||||||||||||||||||||||||||||    
T  332281 tccctccgtcccatattagatgacctatttgactccga--cacgtaccaacgcatatgttttatctttgatatcttcaattctctact 332366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 4083212 - 4083292
Alignment:
Q  174 cctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattct 254  Q
    |||||||||| || ||||||| ||||||||||| || ||||  || |||||||| ||||||||||| ||||||| ||||||    
T  4083212 cctccgttccatactagatgagctagttgactccgacacacatatcaatgcatatgttttatctttaatatctttaattct 4083292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 30776403 - 30776364
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  30776403 aatgcatatgttttatctttgatatcttcaattctctact 30776364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 38588143 - 38588072
Alignment:
Q  176 tccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatctt 247  Q
    ||||| ||| |||| |||| |||||||||||||||||||  |  |||||||| |||||||||||||||||||    
T  38588143 tccgtccctaaataaatgatctagttgactctgatacacataccaatgcatatgttttatctttgatatctt 38588072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 7106328 - 7106368
Alignment:
Q  219 taatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| |||||||||||| ||||||||||| ||||||    
T  7106328 taatgcatatgttttatctttgctatcttcaattatctact 7106368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 14062 - 14149
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||  |||||||||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  14062 tccctccgtccctaaataagtgacctagttgactctgatacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 14149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 10396 - 10483
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||  |||||||||||||||||| ||||  | ||||||||| |||||||||||||||||||||||||||||||    
T  10396 tccctccgtccctaaataagtgacctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcaattctctact 10483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 1581023 - 1580936
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||| || ||||||||  ||||||||||||||||||||||||||||||    
T  1581023 tccctccgtccctgaataaatgacctagttgactctgacacacgtatcaatgcatatattttatctttgatatcttcaattctctact 1580936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 6470848 - 6470935
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||| |||| ||| |||| ||||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||    
T  6470848 tcccaccgtccctcaatatatgacctagttgactctgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctact 6470935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 40013654 - 40013741
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  40013654 tccctccgtcccttaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 40013741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 13138390 - 13138303
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||| || ||| |||| ||||||||||||||||||| ||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  13138390 tccctctgtccctcaataaatgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 13138303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 29790945 - 29791032
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  29790945 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 29791032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 38845203 - 38845288
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||    
T  38845203 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 38845288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 30289927 - 30290014
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| | ||  |  |||||||| |||||||||||||||||||||||||||||||    
T  30289927 tccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatctttgatatcttcaattctctact 30290014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 45081815 - 45081902
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| || |||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  45081815 tccctccgtccctaaataaataacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 45081902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 43066132 - 43066217
Alignment:
Q  174 cctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||| ||||    
T  43066132 cctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctttact 43066217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 44123679 - 44123763
Alignment:
Q  175 ctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||| || || ||||||| ||||||||||| || ||||| || |||||||| ||||||||||||| |||||||||||||||||    
T  44123679 ctccgtcccatattagatgatctagttgactccgacacacgtatcaatgcatatgttttatctttgaaatcttcaattctctact 44123763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 2805734 - 2805647
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| |||||| |||||||||||| | ||  |  |||||||| |||||||||||||||||||||||||||||||    
T  2805734 tccctccgtccctaaataaatgacccagttgactctgacatacataccaatgcatatgttttatctttgatatcttcaattctctact 2805647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 3293360 - 3293273
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| |||| |||||||||||||| |||   |  |||||||| |||||||||||||||||||||||||||||||    
T  3293360 tccctccgtccctaaataaatgatctagttgactctgacacatataccaatgcatatgttttatctttgatatcttcaattctctact 3293273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 8351138 - 8351051
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||  ||| |||||||||||||| ||||| |  | |||||| |||||||||||||||||||||||||||||||    
T  8351138 tccctccgtccctaaataagtgatctagttgactctgacacacgtaccagtgcatatgttttatctttgatatcttcaattctctact 8351051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 12893559 - 12893621
Alignment:
Q  197 tagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||| || ||||| || |||||||| |||||||||||||||||||||||||||||||    
T  12893559 tagttgactccgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctact 12893621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 14522397 - 14522470
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| |||||||| | | | ||||| || |||||||| |||||||||||||||||||||||||||||||    
T  14522397 aatagatgatctagttgattttaacacacgtatcaatgcatatgttttatctttgatatcttcaattctctact 14522470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 37709902 - 37709987
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| ||| |||| ||||||||||||||||| | ||||  |  |||| ||| |||||||||||||||||||||||||||||    
T  37709902 tccctccgtccctaaataaatgacctagttgactctaacacacataccaatgtatatgttttatctttgatatcttcaattctcta 37709987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 38739660 - 38739745
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| | | |||| ||||||||||||||||||| ||||  |  |||||||| ||||||||||| |||||||||||||||||    
T  38739660 tccctccgtccttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttaatatcttcaattctcta 38739745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 45253752 - 45253865
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgat-acacgaattaatgcatacgttttatctttgatatcttcaattctctactnnnnnnnttat 270  Q
    |||||| || ||||||||||||| ||||||||||| ||  ||||| |  |||||||| ||||||| ||||||||||||||||||||||        ||||    
T  45253752 tccctctgtcccttaatagatgatctagttgactccgacgacacgtaccaatgcatatgttttatttttgatatcttcaattctctacaaaaaaaattat 45253851  T
Q  271 gaaaatttaatatt 284  Q
    ||||||||||||||    
T  45253852 gaaaatttaatatt 45253865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 30380533 - 30380620
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||  ||| ||| |||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  30380533 tccctccgtccctaaataagtgatctaattgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 30380620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 886309 - 886239
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctac 258  Q
    |||||||||| |||||||| || ||||| |  |||||||| ||||||||||||||||||| ||||||||||    
T  886309 tagatgacctggttgactccgacacacgtaccaatgcatatgttttatctttgatatctttaattctctac 886239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 23248794 - 23248867
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||| ||||||||||||||||| | |||   || |||||||| |||||||||||||||| ||||||||||||||    
T  23248794 aataaatgacctagttgactctaacacatatatcaatgcatatgttttatctttgatatattcaattctctact 23248867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 2986362 - 2986428
Alignment:
Q  192 tgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||||||||||| ||||  |  |||||||| |||||||| ||||||||||||||||||||||    
T  2986362 tgacctagttgactctgacacacataccaatgcatatgttttatc-ttgatatcttcaattctctact 2986428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 9302595 - 9302528
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctc 255  Q
    ||||||||||| |||||||||  ||||  || |||| ||| |||||||||||||||||||||||||||    
T  9302595 tagatgacctaattgactctggcacacatataaatgtatatgttttatctttgatatcttcaattctc 9302528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 14847228 - 14847295
Alignment:
Q  187 atagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattct 254  Q
    ||||||||||||||||| || || ||||| |  |||||||| ||||||||||||||||||| ||||||    
T  14847228 atagatgacctagttgattccgacacacgcaccaatgcatatgttttatctttgatatctttaattct 14847295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 19295295 - 19295350
Alignment:
Q  39 tctcttttccgtaagagaagcccggtcccacatcccctcacattttactctgatcg 94  Q
    |||||||| ||||||||||| |||||||||||| | ||||||||| ||||||||||    
T  19295295 tctctttttcgtaagagaagtccggtcccacatacactcacatttcactctgatcg 19295350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 18809327 - 18809364
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||||||| |||||||||||||||||||||||||||||    
T  18809327 aatgcatatgttttatctttgatatcttcaattctcta 18809364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 31128015 - 31127978
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||||||| |||||||||||||||||||||||||||||    
T  31128015 aatgcatatgttttatctttgatatcttcaattctcta 31127978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 10658033 - 10658068
Alignment:
Q  224 catacgttttatctttgatatcttcaattctctact 259  Q
    |||| |||||||||||||||||||||||||||||||    
T  10658033 catatgttttatctttgatatcttcaattctctact 10658068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 259
Target Start/End: Original strand, 25256385 - 25256424
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  25256385 aatgcaaatgttttatctttgatatcttcaattctctact 25256424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 259
Target Start/End: Original strand, 39361176 - 39361215
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  39361176 aatgcatatgttttatttttgatatcttcaattctctact 39361215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 259
Target Start/End: Complemental strand, 6470813 - 6470784
Alignment:
Q  230 ttttatctttgatatcttcaattctctact 259  Q
    ||||||||||||||||||||||||||||||    
T  6470813 ttttatctttgatatcttcaattctctact 6470784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 14522637 - 14522605
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgac 204  Q
    ||||||||| |||||||||||||||||||||||    
T  14522637 tccctccgtcccttaatagatgacctagttgac 14522605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 4925096 - 4925009
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||||||||||||||||| |||| ||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  4925096 tccctccgtccctcaatagatgacctagttgaccctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 4925009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 29627271 - 29627358
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  || |||||||| |||||||||||||||||||||||||||||||    
T  29627271 tccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatatgttttatctttgatatcttcaattctctact 29627358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 35290289 - 35290376
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||| |  ||||||||  ||||||||||||||||||||||||||||||    
T  35290289 tccctccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatattttatctttgatatcttcaattctctact 35290376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 37516147 - 37516234
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||||||| |||||||||||||| ||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  37516147 tccctccgtccctcaatagatgatctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 37516234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 14475488 - 14475406
Alignment:
Q  176 tccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctac 258  Q
    ||||| ||||||||||||||||||||||||| || ||||| |  |||||||| ||||||||||||||||||||||||||||||    
T  14475488 tccgtcccttaatagatgacctagttgactccgacacacgtacaaatgcatatgttttatctttgatatcttcaattctctac 14475406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 43517304 - 43517231
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||||||||||||||||| ||||| | ||||||||| ||||||||||||||||| |||||||||||||    
T  43517304 aatagatgacctagttgactctgacacacgtactaatgcatatgttttatctttgatatcatcaattctctact 43517231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 284
Target Start/End: Complemental strand, 30780003 - 30779891
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctactnnnnnnnttatg 271  Q
    ||||||||||||| ||||||||||||||||||||| || ||||| |  ||| |||| ||||||||||| ||||||||||||| |||||       |||||    
T  30780003 tccctccgttcctcaatagatgacctagttgactccgacacacgtaccaatacatatgttttatctttcatatcttcaattcactactaaaaaaattatg 30779904  T
Q  272 aaaatttaatatt 284  Q
    |||||||||||||    
T  30779903 aaaatttaatatt 30779891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 35448255 - 35448168
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  35448255 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 35448168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 37843819 - 37843747
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctac 258  Q
    |||||||||||||||||||||||| ||||| |  |||||||| ||||||| ||||||||||||||||||||||    
T  37843819 aatagatgacctagttgactctgacacacgtaccaatgcatatgttttatatttgatatcttcaattctctac 37843747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 284
Target Start/End: Original strand, 42421691 - 42421800
Alignment:
Q  175 ctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctactnnnnnnnttatgaaa 274  Q
    ||||||||| || ||||||| ||||||||||| || ||||| |   ||||||| |||||||||||||||||||||||||||||||       ||||||||    
T  42421691 ctccgttccatattagatgatctagttgactccgacacacgtacctatgcatatgttttatctttgatatcttcaattctctactaaaaaaattatgaaa 42421790  T
Q  275 atttaatatt 284  Q
    ||||||||||    
T  42421791 atttaatatt 42421800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 5213180 - 5213093
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||  |||||||||||||||||| ||||| |  |||||||| ||||||||||| |||||||||||||||||||    
T  5213180 tccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatctttaatatcttcaattctctact 5213093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 19889673 - 19889744
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||| |||||||||||||| |||||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  19889673 tagaggacctagttgactccgatacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 19889744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 23988582 - 23988669
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||| ||||||    
T  23988582 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattatctact 23988669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 38697966 - 38698053
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| |||||||| |||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  38697966 tccctccgtccctaaataaatgacctaattgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 38698053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 39036413 - 39036500
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||  || |||||||||| ||||||||||||| ||||| |  |||| ||| |||||||||||||||||||||||||||||||    
T  39036413 tccctccgtctctcaatagatgacatagttgactctgacacacgtaccaatgtatatgttttatctttgatatcttcaattctctact 39036500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 40512938 - 40512851
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||  |||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  40512938 tccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 40512851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 42148310 - 42148397
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| |||| |||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  42148310 tccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 42148397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 172 - 258
Target Start/End: Complemental strand, 41411416 - 41411330
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctac 258  Q
    ||||||||| ||| |||||||||| |||||||||  || ||||| |  |||||||| ||||||||||||||||||||||||||||||    
T  41411416 tccctccgtccctcaatagatgacttagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 41411330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 5364423 - 5364510
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||  |||||||||||||||||| ||||  |  |||||||| |||||||||||||||| ||||||||||||||    
T  5364423 tccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatattcaattctctact 5364510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 255
Target Start/End: Complemental strand, 32334898 - 32334815
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctc 255  Q
    |||||| || ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||    
T  32334898 tccctctgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctc 32334815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 258
Target Start/End: Original strand, 1830657 - 1830743
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctac 258  Q
    ||||||||| ||| |||||||||| |||||||||  || ||| | |  |||||||| ||||||||||||||||||||||||||||||    
T  1830657 tccctccgtccctcaatagatgacttagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 1830743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 258
Target Start/End: Original strand, 40316124 - 40316210
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctac 258  Q
    ||||||||| ||| |||||||||| |||||||||  || ||| | |  |||||||| ||||||||||||||||||||||||||||||    
T  40316124 tccctccgtccctcaatagatgacttagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 40316210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 39894784 - 39894871
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||  ||| |||||||||||||| | ||  |  |||||||| |||||||||||||||||||||||||||||||    
T  39894784 tccctccgtccctaaataagtgatctagttgactctgacatacataccaatgcatatgttttatctttgatatcttcaattctctact 39894871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 15268129 - 15268198
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||||||  |||||||||| || ||||| ||||||||||| ||||||| ||| |||||||||||||||||    
T  15268129 tagatgatttagttgactccgacacacgtattaatgcatatgttttatttttaatatcttcaattctcta 15268198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 32002224 - 32002185
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  32002224 aatgcatatgttttatctttgatatcttcaattctctact 32002185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 4300071 - 4300005
Alignment:
Q  191 atgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||| ||||||||||  || ||||| |  |||||||| |||||||||||||||||||||||||||||    
T  4300071 atgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 4300005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 16048105 - 16048171
Alignment:
Q  191 atgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||| ||||||||||  || ||||| |  |||||||| |||||||||||||||||||||||||||||    
T  16048105 atgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 16048171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 39405767 - 39405852
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| || || || |||| ||||||||||  || ||||| |  |||||||| ||||||||||| |||||||||||||||||    
T  39405767 tccctccgtcccatattaaatgatctagttgacttcgagacacgtaccaatgcatatgttttatctttaatatcttcaattctcta 39405852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 2863960 - 2864044
Alignment:
Q  175 ctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||  ||||||||| ||||||||||| |  ||| | |  |||  ||||| |||||||||||||||||||||||||||||    
T  2863960 ctccgttccagaatagatgatctagttgactccgtcacatgtaccaatatatacgctttatctttgatatcttcaattctctact 2864044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 43067234 - 43067314
Alignment:
Q  174 cctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattct 254  Q
    ||||||| || || || |||| ||||||||||  || ||||| |  |||||||| ||||||||||||||||||||||||||    
T  43067234 cctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattct 43067314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 970160 - 970226
Alignment:
Q  191 atgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||| ||||||||||  || ||||| |  |||||||| |||||||||||| ||||||||||||||||    
T  970160 atgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgttatcttcaattctcta 970226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 19088012 - 19087946
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattct 254  Q
    |||||||| |||||||||| || ||||| |  |||||||| ||||||| | ||||||||||||||||    
T  19088012 tagatgacgtagttgactccgacacacgtaccaatgcataagttttatttatgatatcttcaattct 19087946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 19868918 - 19868831
Alignment:
Q  197 tagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctactnnnnnnnttatgaaaatttaatatt 284  Q
    |||||||||| || ||||| |  |||||||| |||||||||||| ||| ||||||| ||||||       ||||||||||||||||||    
T  19868918 tagttgactccgacacacgtaccaatgcatatgttttatctttgctattttcaattgtctactaaaaatattatgaaaatttaatatt 19868831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 22613948 - 22613882
Alignment:
Q  191 atgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||| ||||||||||  || ||||| |  |||||||| |||||||||||||||||||||||| ||||    
T  22613948 atgatctagttgacttagacacacgtaccaatgcatatgttttatctttgatatcttcaattttcta 22613882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 25563551 - 25563583
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaatt 252  Q
    |||||||| ||||||||||||||||||||||||    
T  25563551 aatgcatatgttttatctttgatatcttcaatt 25563583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 39036668 - 39036636
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgac 204  Q
    ||||||||| |||||||||||||||||||||||    
T  39036668 tccctccgtcccttaatagatgacctagttgac 39036636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 46483558 - 46483641
Alignment:
Q  176 tccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||| ||| |||||||||||||||||||||||| ||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  46483558 tccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 46483641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 25097445 - 25097358
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||||||||| ||||||||||| | ||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  25097445 tccctccgtacctcaatagatgacttagttgactctaacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 25097358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 7460076 - 7459991
Alignment:
Q  174 cctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  7460076 cctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 7459991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 256
Target Start/End: Original strand, 34827325 - 34827409
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctct 256  Q
    ||||||||| ||| ||||  |||||||||||||||||| ||||| |  |||||||| ||||||||||||||||||||||||||||    
T  34827325 tccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctct 34827409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 284
Target Start/End: Complemental strand, 3547678 - 3547566
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctactnnnnnnnttatg 271  Q
    ||||||||| || || ||||||||||| ||||||| || ||||| |  |||||||| |||||||||||||||||||||||| ||||||       |||||    
T  3547678 tccctccgtcccatattagatgacctaattgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattatctactaaaaaaattatg 3547579  T
Q  272 aaaatttaatatt 284  Q
    |||||||||||||    
T  3547578 aaaatttaatatt 3547566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 38492055 - 38492142
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||  |||||||||||||||||| ||||| |  |||||||| ||||||||||| |||||||||||||||||||    
T  38492055 tccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatctttaatatcttcaattctctact 38492142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 15503028 - 15503113
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| ||| ||||||||||||| ||||||| || | ||| || |||||||| |||||||||||||||| ||||||||||||    
T  15503028 tccctccgtccctcaatagatgacctaattgactccgacatacgtatcaatgcatatgttttatctttgatatattcaattctcta 15503113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 18659055 - 18659140
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| ||| |||| |||| |||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||    
T  18659055 tccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 18659140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 32285420 - 32285347
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||| ||||||||||||||||| ||||| |  ||| |||| |||||||||||||||||||||||||||||||    
T  32285420 aatagacgacctagttgactctgacacacgtaccaatacatatgttttatctttgatatcttcaattctctact 32285347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 45167306 - 45167387
Alignment:
Q  176 tccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||| | |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||    
T  45167306 tccgttcttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 45167387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 256
Target Start/End: Original strand, 45093723 - 45093807
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctct 256  Q
    |||||||||| | || |||||||  ||||||||||||| ||||| |  |||||||| ||||||||||||||||||||||||||||    
T  45093723 tccctccgttacatattagatgatttagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctct 45093807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 49057861 - 49057945
Alignment:
Q  174 cctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctac 258  Q
    ||||||| ||| |||| |||||||||||||||  || ||||| |  |||||||| ||||||||||||||||||||||||||||||    
T  49057861 cctccgtccctcaataaatgacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 49057945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 8559259 - 8559176
Alignment:
Q  176 tccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| ||||||||||| |||||||||||||||||||    
T  8559259 tccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttaatatcttcaattctctact 8559176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 9145509 - 9145592
Alignment:
Q  176 tccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||| || ||||||||||||||||||| || ||||| |  |||||||| ||||||||||||||||||| |||| ||||||    
T  9145509 tccgttccatattagatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttgaattttctact 9145592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 10571402 - 10571315
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| |||  ||| ||||||||||||||||||| ||||  |  ||| |||| |||||||||||||||||||||||||||||||    
T  10571402 tccctccgtccctcgataaatgacctagttgactctgacacacataccaatacatatgttttatctttgatatcttcaattctctact 10571315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 27848955 - 27849042
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| | |||||||||||||||||| ||| | ||  |  |||||||| |||||||||||||||||||||||||||||||    
T  27848955 tccctccgtccctcattagatgacctagttgactttgacatacataccaatgcatatgttttatctttgatatcttcaattctctact 27849042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 29728356 - 29728269
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||| | |  |||||||| |||||||||| ||||||||||||| ||||||    
T  29728356 tccctccgtccctcaataaatgacctagttgactctgacacaagtaccaatgcatatgttttatcttagatatcttcaattttctact 29728269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 37832903 - 37832990
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||| ||||||||||||| ||||  |  |||||||| ||||||| |||||||||||||||||||||||    
T  37832903 tccctccgtccctaaataaatgacatagttgactctgacacacataccaatgcatatgttttatttttgatatcttcaattctctact 37832990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 38833687 - 38833754
Alignment:
Q  192 tgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  38833687 tgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 38833754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 43137854 - 43137941
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| |||| |||||||||||||| ||||  |  |||||||| |||||||||||||||| ||||||||||||||    
T  43137854 tccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatattttcaattctctact 43137941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 51062413 - 51062480
Alignment:
Q  192 tgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  51062413 tgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 51062480  T

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Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 54840386 - 54840304
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattct 254  Q
    ||||||| | ||| |||| ||||||||||||||||||| ||||  |  |||||||| ||||||||||||||||||||||||||    
T  54840386 tccctccatccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattct 54840304  T

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Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 21906999 - 21907084
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| ||| |||| |||| |||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||| ||||    
T  21906999 tccctccgtccctcaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattatcta 21907084  T

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Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 47638072 - 47638145
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||| || |||| ||||||||||| |  |||||||| ||||||||||| |||||||||||||||||||    
T  47638072 aatagatgacttaattgattctgatacacgtaccaatgcatatgttttatctttaatatcttcaattctctact 47638145  T

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Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 51392536 - 51392463
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||| ||||||||||||||||| | ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  51392536 aataaatgacctagttgactcttacacacataccaatgcatatgttttatctttgatatcttcaattctctact 51392463  T

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Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 53066378 - 53066462
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| ||| |||||||||| ||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||| ||||    
T  53066378 tccctccgtccctcaatagatgac-tagttgactctgacacacttaccaatgcatatgttttatctttgatatcttcaattatcta 53066462  T

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Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 1327314 - 1327401
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| |||| |||||||||||| | | ||  |  |||||||| |||||||||||||||||||||||||||||||    
T  1327314 tccctccgtccctaaataaatgatctagttgactcttacatacataccaatgcatatgttttatctttgatatcttcaattctctact 1327401  T

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Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 7671555 - 7671484
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||||||||| || ||  || | || |||||||| |||||||||||||||||||||||||||||||    
T  7671555 tagatgacctagttgattcagacgcatgtatcaatgcatatgttttatctttgatatcttcaattctctact 7671484  T

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Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 28690535 - 28690606
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||||||||||||| || ||||  |  |||||||| ||||||||||||||||||||||| |||||||    
T  28690535 tagatgacctagttgactccgacacacataccaatgcatatgttttatctttgatatcttcaatgctctact 28690606  T

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Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 255
Target Start/End: Complemental strand, 52668743 - 52668660
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctc 255  Q
    ||||||||| ||| |||| |||||||||||| |||||| ||||  || ||||||||  ||||||||||||||| ||||||||||    
T  52668743 tccctccgtccctaaataaatgacctagttggctctgacacacatatcaatgcatatattttatctttgatattttcaattctc 52668660  T

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Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 10437290 - 10437372
Alignment:
Q  177 ccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||| | |||||||| ||||||||||||| ||||| |  |||  ||| |||||||||||||||||||||||||| ||||    
T  10437290 ccgttcctcagtagatgacttagttgactctgacacacgtaccaatttatatgttttatctttgatatcttcaattctttact 10437372  T

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Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 257
Target Start/End: Complemental strand, 4238878 - 4238793
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||||||||||| || || |||| ||||||||||  || ||||| |  |||||||| ||||||||||| |||||||||||||||||    
T  4238878 tccctccgttccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttaatatcttcaattctcta 4238793  T

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Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 36665038 - 36665107
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||||||| || ||||||| |||||||| |  |||||||| ||||||||||||||||||||| |||||||    
T  36665038 tagatgacttaattgactccgatacacgtaccaatgcatatgttttatctttgatatcttcatttctcta 36665107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 35718097 - 35718026
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||  ||||||||||||| ||||| |  |||||||| |||||||| ||||||||||||||| ||||||    
T  35718097 tagatgatttagttgactctgacacacgtaccaatgcatatgttttatccttgatatcttcaattttctact 35718026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 48707053 - 48707014
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  48707053 aatgcatatgttttatctttgatatcttcaattctctact 48707014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 10435156 - 10435222
Alignment:
Q  191 atgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||| ||||||||||  || ||||| |  |||||||| ||||||||||| |||||||||||||||||    
T  10435156 atgatctagttgacttcgacacacgtaccaatgcatatgttttatctttaatatcttcaattctcta 10435222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 17052886 - 17052952
Alignment:
Q  191 atgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||| ||||||||||  || ||||| |  |||||||| |||||||||||||||||||||||| ||||    
T  17052886 atgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattttcta 17052952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 32951346 - 32951309
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  32951346 aatgcatatgttttatctttggtatcttcaattctcta 32951309  T

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Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 259
Target Start/End: Original strand, 48531326 - 48531412
Alignment:
Q  173 ccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||||| |||||||||  ||||||||||||| ||||| || ||||||||  ||||||||||||||||||||||||||||||    
T  48531326 ccctccgttcctcaatagatgatttagttgactctgacacacgtatcaatgcatatattttatctttgatatcttcaattctctact 48531412  T

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Target: chr7; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 23474207 - 23474140
Alignment:
Q  192 tgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||    
T  23474207 tgacctagttgactctgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctact 23474140  T

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Target: chr7; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 36819699 - 36819786
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  36819699 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 36819786  T

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Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 19072772 - 19072859
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||| ||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  19072772 tccctccgtccctaaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 19072859  T

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Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 31466616 - 31466529
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||  |||||||||||||||||| ||||| |  |||||||| |||||||||||||||||||||||||| ||||    
T  31466616 tccctccgtccctaaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctatact 31466529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 32619200 - 32619113
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||| ||||||||||||| ||||  || |||||||| ||||||| |||||||||||||||||||||||    
T  32619200 tccctccgtccctaaataaatgacttagttgactctgacacacatatcaatgcatatgttttatttttgatatcttcaattctctact 32619113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 36859466 - 36859379
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||||||| |||| |||||||| |||||||| | ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  36859466 tccctccgttcctaaataaatgacctaattgactctaacacacataccaatgcatatgttttatctttgatatcttcaattctctact 36859379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 42086896 - 42086809
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||| | ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  42086896 tccctccatccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 42086809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 21392035 - 21392108
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| |||||||||||||| ||||| |  |||||||| ||||||||||||||||||| |||||||||||    
T  21392035 aatagatgatctagttgactctgacacacgtaccaatgcatatgttttatctttgatatctttaattctctact 21392108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 44479976 - 44479891
Alignment:
Q  174 cctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||| ||| ||||  |||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  44479976 cctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 44479891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 2400288 - 2400375
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| |||   |  |||||||| |||||||||||||||||||| ||||||||||    
T  2400288 tccctccgtccctaaataaatgacctagttgactctgacacatataccaatgcatatgttttatctttgatatcttccattctctact 2400375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 28185666 - 28185579
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  ||| |||| ||||||||||||||||||| |||||||||||    
T  28185666 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatacatatgttttatctttgatatctttaattctctact 28185579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 37951203 - 37951116
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| | | |||| |||||||||||||||||||  |||  |  |||||||| |||||||||||||||||||||||||||||||    
T  37951203 tccctccgtccataaataaatgacctagttgactctgacgcacataccaatgcatatgttttatctttgatatcttcaattctctact 37951116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 47080983 - 47081070
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||  ||||||||||||||||||| ||||  |  |||||||| ||||||||||||||||||| |||||||||||    
T  47080983 tccctccgtccctaaatgaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttaaattctctact 47081070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 47713760 - 47713673
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||  |||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||| ||||||    
T  47713760 tccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattttctact 47713673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 31110627 - 31110712
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| |||    | |||||||| |||||||||||||||| ||||||||||||||    
T  31110627 tccctccgtccctaaataaatgacctagttgactctgacacatc--tcaatgcatatgttttatctttgatattttcaattctctact 31110712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 284
Target Start/End: Complemental strand, 31497945 - 31497849
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctactnnnnnnnttatgaaaatttaatatt 284  Q
    ||||| ||||||||||||| || ||||  | |||| |||| |||||||||||||||||||||||| ||||||       ||||||||||||||||||    
T  31497945 tagataacctagttgactccgacacacatactaatacatatgttttatctttgatatcttcaattatctactaaaaaagttatgaaaatttaatatt 31497849  T

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Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 34478269 - 34478182
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| || || || || ||||||||||||  || ||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  34478269 tccctccgtcccatattaaataacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 34478182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 36905529 - 36905616
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||  ||||||||||||| ||||  |  ||| |||| |||||||||||||||||||||||||||||||    
T  36905529 tccctccgtccctaaataaatgatttagttgactctgacacacataccaatacatatgttttatctttgatatcttcaattctctact 36905616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 257
Target Start/End: Complemental strand, 10464373 - 10464288
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| || || || ||||  ||||||||| ||| ||||| |  |||||||| |||||||||||||||||||||||||||||    
T  10464373 tccctccgtcccatattaaatgatatagttgactttgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 10464288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 257
Target Start/End: Complemental strand, 37231822 - 37231737
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| || || || |||| ||||||||||  || ||||| |  |||||||| |||||||||||||||||||||||||||||    
T  37231822 tccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 37231737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 47537940 - 47538013
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||| |||| ||| |||| ||||||| ||| |  |||||||| |||||||||||||||||||||||||||||||    
T  47537940 aataaatgatctaattgattctgatatacgtaccaatgcatatgttttatctttgatatcttcaattctctact 47538013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 42834550 - 42834463
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||  || |||| |||||||| |||||| ||||||||  |  |||| ||| |||||||||||||||||||||||||| ||||    
T  42834550 tccctccgtctctaaataaatgacctatttgactttgatacacataccaatgtatatgttttatctttgatatcttcaattctttact 42834463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 35500957 - 35500920
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||||||| |||||||||||||||||||||||||||||    
T  35500957 aatgcatatgttttatctttgatatcttcaattctcta 35500920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 36643213 - 36643250
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||||||| |||||||||||||||||||||||||||||    
T  36643213 aatgcatatgttttatctttgatatcttcaattctcta 36643250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 38198500 - 38198556
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatat 244  Q
    |||||||||||||||||||||||||||  || ||||||||  |||||||||| ||||    
T  38198500 tagatgacctagttgactctgatacacatatcaatgcatattttttatctttaatat 38198556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 257
Target Start/End: Original strand, 4033297 - 4033379
Alignment:
Q  175 ctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||||| ||||| ||||||| |||||||||||||| ||||  || ||||||||  |||||||||| |||| || |||| ||||    
T  4033297 ctccgtcccttattagatgatctagttgactctgacacacatatcaatgcatattttttatctttaatatatttaattatcta 4033379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 39982325 - 39982287
Alignment:
Q  219 taatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  39982325 taatgcatatgttttatctttaatatcttcaattctcta 39982287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 18795351 - 18795311
Alignment:
Q  219 taatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||| ||| ||||||||||||||||||| |||||||||||    
T  18795351 taatgtatatgttttatctttgatatcttaaattctctact 18795311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 48531580 - 48531548
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgac 204  Q
    ||||||||| |||||||||||||||||||||||    
T  48531580 tccctccgtcccttaatagatgacctagttgac 48531548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 12755 - 12842
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||  |||||||||||||||||| ||||  | ||||||||| |||||||||||||||||||||||||||||||    
T  12755 tccctccgtccctaaataagtgacctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcaattctctact 12842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 41475 - 41388
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  41475 tccctccgtccctcaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 41388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 7e-21; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 643689 - 643602
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  643689 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 643602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 13207195 - 13207125
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctac 258  Q
    |||||||||||||||||||||| ||||| |  |||||||| ||||||||||||||||||||||||||||||    
T  13207195 tagatgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 13207125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 258
Target Start/End: Original strand, 33121545 - 33121631
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctac 258  Q
    ||||||||| |||||||| |||||||||||||||  || ||||| |  |||||||| ||||||||||||||||||||||||||||||    
T  33121545 tccctccgtcccttaataaatgacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 33121631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 31854821 - 31854906
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| ||| |||| |||||| |||||||||||||||||  |  |||||||| |||||||||||||||||||||||||||||    
T  31854821 tccctccgtccctaaataaatgacccagttgactctgatacacataccaatgcatatgttttatctttgatatcttcaattctcta 31854906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 30237168 - 30237256
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacg-ttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||| |  |||||||| | ||||||||||||||||||| ||||||||||    
T  30237168 tccctccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatgtttttatctttgatatcttcgattctctact 30237256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 24150748 - 24150831
Alignment:
Q  176 tccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| |||| ||||||||||||||||||| ||||  |  ||||||||  ||||||||||||||||||||||||||||||    
T  24150748 tccgttcctaaataaatgacctagttgactctgacacacataccaatgcatatattttatctttgatatcttcaattctctact 24150831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 22020283 - 22020364
Alignment:
Q  176 tccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||| | |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||    
T  22020283 tccgttcttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 22020364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 11114568 - 11114655
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||| ||||| ||||  |  |||||||| |||||||||||||||||||| ||||||||||    
T  11114568 tccctccgtccctcaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatcttcgattctctact 11114655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 18991907 - 18991994
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| ||||  |||||||||||||||||| ||||| |  |||||||| ||||||| |||||||||||||||| ||||||    
T  18991907 tccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatttttgatatcttcaattttctact 18991994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 25435415 - 25435501
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||||||| |||| |||| |||||||||| ||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  25435415 tccctccgttcctcaataaatgatctagttgact-tgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 25435501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 29986394 - 29986329
Alignment:
Q  194 acctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  29986394 acctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 29986329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 29403650 - 29403734
Alignment:
Q  175 ctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||| | |||||| ||||| ||||||||||||| ||||  |  ||||| || |||||||||||||||||||||||||||||||    
T  29403650 ctccgtcctttaataaatgacttagttgactctgacacacataccaatgcgtatgttttatctttgatatcttcaattctctact 29403734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 7098112 - 7098044
Alignment:
Q  191 atgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||| |||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||| ||||||    
T  7098112 atgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattttctact 7098044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 20662303 - 20662230
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||| |||||||||||| |||||| | ||  |  |||||||| ||||||||||| |||||||||||||||||||    
T  20662303 aataaatgacctagttgcctctgacatacataccaatgcatatgttttatctttaatatcttcaattctctact 20662230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 8796056 - 8796140
Alignment:
Q  175 ctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||| ||| |||| || | |||||||||||||| ||||  |  |||| ||| ||||||||||||||||||| |||||||||||    
T  8796056 ctccgtccctaaataaatcatctagttgactctgacacacataccaatgtatatgttttatctttgatatctttaattctctact 8796140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 25163215 - 25163251
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctct 256  Q
    |||||||| ||||||||||||||||||||||||||||    
T  25163215 aatgcatatgttttatctttgatatcttcaattctct 25163251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 19069010 - 19068939
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||| ||||| |||| |||||||| |  ||| ||||  |||||||||||||||||||| |||||||||    
T  19069010 tagatgacttagttaactccgatacacgtaccaatacatatattttatctttgatatcttcagttctctact 19068939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 7e-21; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 25531781 - 25531868
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  25531781 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 25531868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 48219900 - 48219813
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  48219900 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 48219813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 256
Target Start/End: Complemental strand, 16751711 - 16751627
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctct 256  Q
    |||||||||||| || ||||||||||||||||||| || ||||| |  |||||||| ||||||||||||||||||| ||||||||    
T  16751711 tccctccgttccatattagatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatctttaattctct 16751627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 3529179 - 3529266
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| |||||||  |||| |||||||||||||| ||||| |  |||||||| |||||||||||||||| ||||||||||||||    
T  3529179 tccctccgtcccttaattaatgatctagttgactctgacacacgtaccaatgcatatgttttatctttgatatattcaattctctact 3529266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 32565749 - 32565836
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| | | |||||||||| ||||||||||||| ||||| |  |||||||| ||||| |||||||||||||||||||||||||    
T  32565749 tccctccgtccttcaatagatgacttagttgactctgacacacgtaccaatgcatatgttttctctttgatatcttcaattctctact 32565836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 39354522 - 39354435
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||| ||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  39354522 tccctacgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 39354435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 48265069 - 48264982
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||  |  |||||||| ||||||||||| |||||||||||||||||||    
T  48265069 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttaatatcttcaattctctact 48264982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 50539263 - 50539350
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| |||| |||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  50539263 tccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 50539350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 52378992 - 52379079
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| |||| |||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  52378992 tccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 52379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 257
Target Start/End: Complemental strand, 32988607 - 32988522
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||||||||  || |||| ||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||    
T  32988607 tccctccgtctctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 32988522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 38458734 - 38458819
Alignment:
Q  174 cctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||| ||| |||| ||||||||||||| ||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  38458734 cctccgtccctcaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 38458819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 30529308 - 30529221
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||| | |  |||||||| |||||||||| ||||||||||||| ||||||    
T  30529308 tccctccgtccctcaataaatgacctagttgactctgacacaagtaccaatgcatatgttttatcttagatatcttcaattttctact 30529221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 255
Target Start/End: Original strand, 48376161 - 48376244
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctc 255  Q
    |||||| |||| | |||||||||||||||| ||| ||| ||||| |  |||||||| |||||||||||||||||||||||||||    
T  48376161 tccctctgttcttcaatagatgacctagttaactttgacacacgtaccaatgcatatgttttatctttgatatcttcaattctc 48376244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 50481281 - 50481393
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctactnnnnnnnttatg 271  Q
    ||||||||| || || |||||||| ||||||| || || ||||| |  |||||||| ||||||||||||||||||||||||||||| |       |||||    
T  50481281 tccctccgtcccatattagatgacttagttgattccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaattatg 50481380  T
Q  272 aaaatttaatatt 284  Q
    |||||||||||||    
T  50481381 aaaatttaatatt 50481393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 50876367 - 50876454
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||| | |||   |  |||||||| |||||||||||||||||||||||||||||||    
T  50876367 tccctccgtccctaaataaatgacctagttgactctaacacatataccaatgcatatgttttatctttgatatcttcaattctctact 50876454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 258
Target Start/End: Complemental strand, 23569932 - 23569846
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctac 258  Q
    ||||||||| ||| |||| |||| ||||||||||  || ||||| |  |||||||| ||||||||||||||||||||||||||||||    
T  23569932 tccctccgtccctcaataaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 23569846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 26441640 - 26441725
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||||||||||| || || |||| ||||||||||  || ||||| |  |||||||| |||||||||||||||||||||||||||||    
T  26441640 tccctccgttccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 26441725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 47222236 - 47222304
Alignment:
Q  191 atgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||||||||| || ||||| |  |||||||| |||||||||||||||||||||||||| ||||    
T  47222236 atgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctttact 47222304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 38738220 - 38738153
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctc 255  Q
    ||||||||||||||||||| || ||||| |  |||||||| |||||||||||||||| ||||||||||    
T  38738220 tagatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatgttcaattctc 38738153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 45235083 - 45235016
Alignment:
Q  192 tgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||| ||||||||||||| ||||| |  |||||||| |||||||||||||||||||||||||| ||||    
T  45235083 tgacttagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctttact 45235016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 31971632 - 31971558
Alignment:
Q  185 taatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||| |||||||||||||| ||| | |  |||||||| |||||||||||||||| ||||| ||||||||    
T  31971632 taatagatgatctagttgactctgacacatgtaccaatgcatatgttttatctttgatatattcaactctctact 31971558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 49805510 - 49805428
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattct 254  Q
    ||||||||| ||| |||| |||| |||||||||||||| | ||  |  |||||||| ||||||||||||||||||||||||||    
T  49805510 tccctccgtccctaaataaatgatctagttgactctgacaaacataccaatgcatatgttttatctttgatatcttcaattct 49805428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 4605002 - 4605083
Alignment:
Q  173 ccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattct 254  Q
    |||||||| |||  |||||||| ||||||||||| || ||||| |  |||||||| ||||||||||||||||||| ||||||    
T  4605002 ccctccgtccctcgatagatgatctagttgactccgacacacgtaccaatgcatatgttttatctttgatatctttaattct 4605083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 16266165 - 16266250
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    ||||||||| || || || |||| ||||||||||  || ||||| |  |||||||| |||||||||||||||||||||||||||||    
T  16266165 tccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 16266250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 29161859 - 29161932
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||| |||| |||||||||||||| ||||| |  ||| |||| |||||||||||||||||||||||| ||||||    
T  29161859 aataaatgatctagttgactctgacacacgtaccaattcatatgttttatctttgatatcttcaattttctact 29161932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 37281109 - 37281182
Alignment:
Q  186 aatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||||||||||||||||||| | ||  |  |||||||  ||||||||||| |||||||||||||||||||    
T  37281109 aatagatgacctagttgactctgacaaacatacaaatgcatgtgttttatcttttatatcttcaattctctact 37281182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 42708511 - 42708594
Alignment:
Q  176 tccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||| | |||| ||||  ||||||||||||| ||||  |  |||||||| ||||||| |||||||||||||||||||||||    
T  42708511 tccgttcttaaataaatgatttagttgactctgacacacataccaatgcatatgttttatatttgatatcttcaattctctact 42708594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 16265055 - 16265121
Alignment:
Q  191 atgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||| ||||||||||  || ||||| |  |||||||| |||||||||||||||||||||||||||||    
T  16265055 atgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 16265121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 43680120 - 43680157
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||||||| |||||||||||||||||||||||||||||    
T  43680120 aatgcatatgttttatctttgatatcttcaattctcta 43680157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 259
Target Start/End: Original strand, 1849750 - 1849789
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  1849750 aatgcatatgttttatctttgatatcttcaattctatact 1849789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 14075738 - 14075850
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctactnnnnnnnttatg 271  Q
    ||||||||| || || ||||||| | ||||||||| || ||||  |  |||||||| ||||||| |||||||||||||||| | ||||       |||||    
T  14075738 tccctccgtcccatattagatgatcgagttgactccgacacacataccaatgcatatgttttatatttgatatcttcaattatttactaaaaaaattatg 14075837  T
Q  272 aaaatttaatatt 284  Q
    |||||||||||||    
T  14075838 aaaatttaatatt 14075850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 41501818 - 41501779
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  41501818 aatgcatatgttttatctttgatatattcaattctctact 41501779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 24982373 - 24982439
Alignment:
Q  191 atgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||| ||||||||||  || ||||| |  |||||||| ||||||| |||||||||||||||||||||    
T  24982373 atgatctagttgacttcgacacacgtaccaatgcatatgttttatatttgatatcttcaattctcta 24982439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 3898781 - 3898744
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  3898781 aatgcatatgttttatctttgatatcttcaattttcta 3898744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 23330503 - 23330540
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctcta 257  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  23330503 aatgcatatgttttatctttcatatcttcaattctcta 23330540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 284
Target Start/End: Original strand, 23340812 - 23340906
Alignment:
Q  188 tagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctactnnnnnnnttatgaaaatttaatatt 284  Q
    ||||| || |||||||||| || ||||| | |||| |||  |||||||| ||||||||||||||||| ||||       ||||||||||||||||||    
T  23340812 tagataacttagttgactccgacacacgtaataatacat--gttttatcgttgatatcttcaattctatactaaaaaaattatgaaaatttaatatt 23340906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 44366 - 44279
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaattctctact 259  Q
    ||||||||| ||| |||| ||||||||||||||||||| || |  |  |||||||| |||||||||||||||||||||||||||||||    
T  44366 tccctccgtccctaaataaatgacctagttgactctgacacgcataccaatgcatatgttttatctttgatatcttcaattctctact 44279  T

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Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 252
Target Start/End: Original strand, 117324 - 117404
Alignment:
Q  172 tccctccgttccttaatagatgacctagttgactctgatacacgaattaatgcatacgttttatctttgatatcttcaatt 252  Q
    ||||||||| ||| |||| |||| |||||||||||||| ||||  || |||||||| ||||||||||| ||||||||||||    
T  117324 tccctccgtccctaaataaatgatctagttgactctgacacacatatcaatgcatatgttttatctttaatatcttcaatt 117404  T

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Target: scaffold0111 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 38570 - 38531
Alignment:
Q  220 aatgcatacgttttatctttgatatcttcaattctctact 259  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  38570 aatgcatatgttttatctttgatatcttcaattatctact 38531  T

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