View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14501_low_13 (Length: 224)
Name: NF14501_low_13
Description: NF14501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14501_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 27499263 - 27499334
Alignment:
| Q |
138 |
gtatattggtttgctagtatatagtaatatataacagctagagggtgcatgcatgatcatacccataatttg |
209 |
Q |
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| T |
27499263 |
gtatattggttggctagtaaatagtaatatagaacagctagagggtgcatgcatgatcatacccataatttg |
27499334 |
T |
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Target: chr7; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 27520420 - 27520485
Alignment:
| Q |
144 |
tggtttgctagtatatagtaatatataacagctagagggtgcatgcatgatcatacccataatttg |
209 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
27520420 |
tggttggctagtatatagtaatatataacagctagagggtgcatgcttgatcatacccataatttg |
27520485 |
T |
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