View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14503_low_3 (Length: 337)
Name: NF14503_low_3
Description: NF14503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14503_low_3 |
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Alignment Details
Target: chr3 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 41275096 - 41275407
Alignment:
| Q |
1 |
aaacgaataaactacctaagaaaccaagagccgtctgcactgaggaaacttttccatcttcattggatgtggattataacgaagctgctgccatacttga |
100 |
Q |
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| T |
41275096 |
aaacgaataaactacctaagaaaccaagagccgtctgcactgaggaaacttttccatcttcattggatgtggattataatgaagctgctgccatacttga |
41275195 |
T |
|
| Q |
101 |
aaatatatacaaacttagcccgacaaccgatatatgtgatgcagattatatagaacgtaagatcaaaagagtctctcgaaggggtaagaagattggtgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41275196 |
aaatatatacaaacttagcccgacaaccgatatatgtgatgcagattatatagaacgtaagatcaaaagagtctctcgaaggggtaagaagattggtgat |
41275295 |
T |
|
| Q |
201 |
gtaagtaaagaggattcaaacagtgatagggtggtcagaaaccagaaaacgaaagccaaacggatgaatcttgatgagaggattgcgttaaaaacgagcg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41275296 |
gtaagtaaagaggattcaaacagtgatagggtggtcagaaaccagaaaacgaaagccaaacggatgaatcttgatgagaggattgcgttaaaaacgagcg |
41275395 |
T |
|
| Q |
301 |
aaaatagtgaag |
312 |
Q |
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|||||||||||| |
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| T |
41275396 |
aaaatagtgaag |
41275407 |
T |
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