View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14503_low_5 (Length: 225)

Name: NF14503_low_5
Description: NF14503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14503_low_5
NF14503_low_5
[»] chr3 (37 HSPs)
chr3 (107-208)||(47370544-47370645)
chr3 (1-66)||(39020120-39020185)
chr3 (1-66)||(43905018-43905083)
chr3 (1-66)||(390854-390919)
chr3 (1-66)||(37508459-37508524)
chr3 (1-66)||(49363212-49363277)
chr3 (1-61)||(24645401-24645461)
chr3 (7-66)||(32767727-32767786)
chr3 (11-66)||(39671058-39671113)
chr3 (1-66)||(8821675-8821740)
chr3 (1-66)||(10206934-10206999)
chr3 (1-66)||(11633658-11633723)
chr3 (1-61)||(24482929-24482989)
chr3 (1-65)||(39907508-39907572)
chr3 (1-61)||(50206936-50206996)
chr3 (7-66)||(44677445-44677504)
chr3 (7-66)||(54027993-54028052)
chr3 (1-66)||(26996361-26996424)
chr3 (1-39)||(34057941-34057979)
chr3 (3-61)||(46253669-46253727)
chr3 (1-66)||(30909074-30909139)
chr3 (1-66)||(49417620-49417685)
chr3 (1-66)||(55013048-55013112)
chr3 (7-47)||(16675506-16675546)
chr3 (1-61)||(20080118-20080177)
chr3 (1-61)||(39697188-39697248)
chr3 (59-110)||(47370467-47370519)
chr3 (1-61)||(55400044-55400104)
chr3 (1-56)||(3281687-3281742)
chr3 (7-66)||(33375911-33375970)
chr3 (1-56)||(46019507-46019562)
chr3 (1-39)||(21005164-21005202)
chr3 (9-66)||(46984593-46984650)
chr3 (1-56)||(19149034-19149090)
chr3 (1-64)||(34662051-34662115)
chr3 (1-61)||(46852098-46852158)
chr3 (5-61)||(50638317-50638373)
[»] chr6 (16 HSPs)
chr6 (1-66)||(3610922-3610987)
chr6 (1-66)||(34504065-34504130)
chr6 (7-66)||(11547490-11547549)
chr6 (1-66)||(2075412-2075477)
chr6 (1-61)||(754404-754464)
chr6 (1-66)||(3199005-3199070)
chr6 (1-62)||(5028231-5028292)
chr6 (1-66)||(13658877-13658942)
chr6 (1-61)||(20822834-20822894)
chr6 (1-61)||(35213527-35213587)
chr6 (7-61)||(2777283-2777336)
chr6 (1-51)||(4820296-4820346)
chr6 (1-39)||(13143370-13143408)
chr6 (1-39)||(18141289-18141327)
chr6 (7-60)||(22341141-22341194)
chr6 (26-66)||(14986705-14986745)
[»] chr7 (25 HSPs)
chr7 (1-66)||(29162937-29163002)
chr7 (1-62)||(11352939-11353000)
chr7 (1-66)||(13162964-13163029)
chr7 (1-66)||(38779705-38779770)
chr7 (1-66)||(39231689-39231754)
chr7 (1-66)||(39823854-39823919)
chr7 (9-66)||(41666883-41666940)
chr7 (1-66)||(47078212-47078277)
chr7 (3-66)||(32815215-32815278)
chr7 (3-56)||(20482574-20482627)
chr7 (1-66)||(36019462-36019526)
chr7 (1-66)||(39332030-39332095)
chr7 (1-66)||(40353309-40353374)
chr7 (1-61)||(44184525-44184585)
chr7 (1-56)||(3062375-3062430)
chr7 (7-66)||(37808725-37808784)
chr7 (11-61)||(21023083-21023133)
chr7 (7-61)||(33180676-33180730)
chr7 (1-66)||(19786040-19786105)
chr7 (1-62)||(41399128-41399189)
chr7 (1-62)||(46532547-46532608)
chr7 (26-66)||(13906418-13906458)
chr7 (1-61)||(41893960-41894020)
chr7 (1-61)||(43573509-43573569)
chr7 (26-66)||(46653048-46653088)
[»] chr2 (23 HSPs)
chr2 (1-60)||(41569363-41569422)
chr2 (1-61)||(9634402-9634462)
chr2 (1-61)||(6170675-6170735)
chr2 (7-66)||(35705545-35705604)
chr2 (7-61)||(35589353-35589407)
chr2 (12-66)||(42223913-42223967)
chr2 (1-66)||(433895-433960)
chr2 (1-66)||(18176985-18177050)
chr2 (26-66)||(6941013-6941053)
chr2 (1-61)||(6999034-6999094)
chr2 (1-61)||(13347781-13347841)
chr2 (4-56)||(29712026-29712078)
chr2 (1-61)||(42678794-42678854)
chr2 (7-62)||(10711775-10711830)
chr2 (1-48)||(29684591-29684638)
chr2 (1-39)||(13765445-13765483)
chr2 (1-47)||(18723639-18723685)
chr2 (1-39)||(42866795-42866833)
chr2 (13-66)||(29879899-29879952)
chr2 (1-62)||(34119617-34119678)
chr2 (1-61)||(2563749-2563809)
chr2 (1-61)||(9377501-9377561)
chr2 (1-61)||(28245773-28245833)
[»] chr8 (32 HSPs)
chr8 (1-66)||(30135976-30136041)
chr8 (3-66)||(40739873-40739936)
chr8 (1-66)||(6968193-6968259)
chr8 (1-59)||(7955975-7956033)
chr8 (1-66)||(7592894-7592959)
chr8 (1-62)||(12707194-12707255)
chr8 (1-66)||(45529207-45529272)
chr8 (1-61)||(11657966-11658026)
chr8 (7-66)||(33589191-33589250)
chr8 (11-66)||(36110193-36110248)
chr8 (7-66)||(41521019-41521078)
chr8 (7-61)||(1871580-1871634)
chr8 (1-66)||(1633851-1633916)
chr8 (1-58)||(11017850-11017907)
chr8 (1-66)||(16966830-16966895)
chr8 (7-56)||(31596999-31597048)
chr8 (1-66)||(32843903-32843967)
chr8 (1-66)||(36531640-36531705)
chr8 (1-66)||(37783932-37783997)
chr8 (1-61)||(2733033-2733092)
chr8 (1-61)||(4994426-4994486)
chr8 (1-56)||(4658234-4658289)
chr8 (7-66)||(7478831-7478890)
chr8 (1-56)||(16327123-16327178)
chr8 (1-39)||(7473014-7473052)
chr8 (1-39)||(16613679-16613717)
chr8 (1-47)||(42569709-42569755)
chr8 (1-66)||(36885449-36885513)
chr8 (8-49)||(41701214-41701255)
chr8 (1-56)||(12898900-12898956)
chr8 (4-56)||(36568006-36568058)
chr8 (1-61)||(41159855-41159915)
[»] chr5 (25 HSPs)
chr5 (1-66)||(8267781-8267846)
chr5 (1-66)||(21064187-21064252)
chr5 (1-66)||(4430897-4430962)
chr5 (1-66)||(35098966-35099031)
chr5 (7-62)||(32912089-32912144)
chr5 (3-66)||(33620655-33620718)
chr5 (10-61)||(43214025-43214076)
chr5 (1-66)||(42267390-42267456)
chr5 (1-66)||(5042293-5042358)
chr5 (1-66)||(6931020-6931085)
chr5 (1-66)||(15267829-15267894)
chr5 (1-66)||(18842282-18842347)
chr5 (1-54)||(19481155-19481208)
chr5 (1-66)||(37700505-37700570)
chr5 (1-61)||(189669-189729)
chr5 (1-61)||(1839311-1839371)
chr5 (1-61)||(6517757-6517817)
chr5 (1-61)||(9581624-9581684)
chr5 (1-61)||(43441783-43441843)
chr5 (3-66)||(5821573-5821636)
chr5 (1-56)||(21136308-21136363)
chr5 (1-66)||(20770176-20770241)
chr5 (1-37)||(6446508-6446544)
chr5 (7-39)||(8675421-8675453)
chr5 (1-61)||(9226346-9226405)
[»] chr4 (39 HSPs)
chr4 (1-66)||(14451438-14451503)
chr4 (1-66)||(21260343-21260408)
chr4 (1-66)||(41486104-41486169)
chr4 (1-66)||(624273-624338)
chr4 (1-66)||(6141739-6141804)
chr4 (7-64)||(26206940-26206997)
chr4 (1-47)||(22819694-22819740)
chr4 (1-66)||(36111356-36111422)
chr4 (1-39)||(47965784-47965822)
chr4 (1-66)||(6494854-6494919)
chr4 (1-66)||(30079891-30079956)
chr4 (1-66)||(31076099-31076164)
chr4 (1-62)||(31657691-31657752)
chr4 (1-66)||(51194314-51194379)
chr4 (13-66)||(51746277-51746330)
chr4 (1-61)||(14010084-14010144)
chr4 (1-61)||(28657407-28657467)
chr4 (1-61)||(39344946-39345006)
chr4 (1-49)||(43769756-43769804)
chr4 (7-66)||(21172331-21172390)
chr4 (7-66)||(25318027-25318085)
chr4 (1-56)||(30169991-30170046)
chr4 (3-66)||(53152282-53152345)
chr4 (1-55)||(17683269-17683323)
chr4 (12-66)||(33899287-33899341)
chr4 (1-39)||(38338910-38338948)
chr4 (1-66)||(42959316-42959382)
chr4 (1-39)||(46405962-46406000)
chr4 (1-39)||(52846215-52846253)
chr4 (1-66)||(5932119-5932183)
chr4 (1-66)||(12112672-12112737)
chr4 (1-66)||(28458338-28458403)
chr4 (1-66)||(37066033-37066098)
chr4 (26-66)||(17475947-17475987)
chr4 (1-49)||(17683392-17683440)
chr4 (1-49)||(21617228-21617276)
chr4 (7-39)||(26718419-26718451)
chr4 (7-39)||(26731047-26731079)
chr4 (1-61)||(33860692-33860751)
[»] chr1 (40 HSPs)
chr1 (1-66)||(21340567-21340632)
chr1 (1-66)||(36673692-36673757)
chr1 (1-66)||(46082082-46082147)
chr1 (1-66)||(47214253-47214318)
chr1 (1-66)||(51191833-51191898)
chr1 (7-66)||(26837503-26837562)
chr1 (1-66)||(3603156-3603221)
chr1 (1-66)||(8411679-8411744)
chr1 (1-66)||(16986983-16987048)
chr1 (1-66)||(21486278-21486343)
chr1 (1-66)||(36779230-36779295)
chr1 (1-61)||(902683-902743)
chr1 (1-61)||(32915038-32915098)
chr1 (1-61)||(34254317-34254377)
chr1 (9-61)||(52714867-52714919)
chr1 (1-47)||(36577392-36577438)
chr1 (9-66)||(756909-756966)
chr1 (1-66)||(20565079-20565144)
chr1 (13-66)||(26585840-26585893)
chr1 (1-66)||(33024532-33024597)
chr1 (1-66)||(44632573-44632638)
chr1 (1-66)||(51286328-51286393)
chr1 (1-61)||(13489707-13489767)
chr1 (1-61)||(15705028-15705088)
chr1 (1-61)||(19969528-19969588)
chr1 (1-61)||(50328107-50328167)
chr1 (1-61)||(50781536-50781596)
chr1 (7-66)||(3024711-3024770)
chr1 (7-58)||(29586044-29586095)
chr1 (1-39)||(10890034-10890072)
chr1 (7-61)||(40316910-40316964)
chr1 (1-66)||(1790553-1790618)
chr1 (1-66)||(1852912-1852977)
chr1 (9-66)||(4514415-4514472)
chr1 (1-66)||(32319270-32319335)
chr1 (1-66)||(38303649-38303714)
chr1 (1-57)||(9008270-9008326)
chr1 (1-61)||(29147840-29147899)
chr1 (4-56)||(33125296-33125348)
chr1 (1-61)||(52362527-52362587)
[»] scaffold0687 (1 HSPs)
scaffold0687 (1-66)||(2242-2307)
[»] scaffold0010 (1 HSPs)
scaffold0010 (9-66)||(134264-134321)
[»] scaffold0471 (1 HSPs)
scaffold0471 (11-66)||(62-117)
[»] scaffold0136 (1 HSPs)
scaffold0136 (9-61)||(38478-38530)
[»] scaffold0532 (1 HSPs)
scaffold0532 (1-49)||(11009-11057)


Alignment Details
Target: chr3 (Bit Score: 86; Significance: 3e-41; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 47370544 - 47370645
Alignment:
Q  107 ttgtcacgttatcaaatttgattatcaaaataattggctcctcgagaattttaaaacagggaaccaaaatttaacaattaaaaatggcaggactatgatt 206  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  47370544 ttgtcacgttatcaaatttgattatcaaaatcattggttcctcgagaattttaaaaaagggaaccaaaatttaacaattaaaaatggcaggactataatt 47370643  T
Q  207 ac 208  Q
    ||    
T  47370644 ac 47370645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39020185 - 39020120
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||||||||| |||||||||||||||||| | ||||| ||||||||||||||||||    
T  39020185 actttttctctcatactcacattactttttactttatctctctattgctatggtttccgtgtcaat 39020120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43905018 - 43905083
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||||||||||||| ||||||||    
T  43905018 actttctctctcatactcacattactttttactttatctctctattgttatggtttctgtgtcaat 43905083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 390854 - 390919
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||||||||| ||| |||||||||||||| | ||||| ||| ||||||||||||||    
T  390854 actttttctctcatactcacattattttttactttatctctctattgctatagtttccgtgtcaat 390919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37508524 - 37508459
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| ||||||||||||| ||||    
T  37508524 actttctctctcatactcacattactttttactttatctctctattgctatggtttccgtgccaat 37508459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 49363277 - 49363212
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| ||||||||||||| ||||    
T  49363277 actttctctctcatactcacattactttttactttatctctctattgatatggtttccgtgccaat 49363212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24645401 - 24645461
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    |||||||||||||||||||| |||||||||||||||||| | ||||||| |||||| ||||    
T  24645401 actttttctctcatactcacattactttttactttatctctctattgttttggttttcgtg 24645461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 32767727 - 32767786
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||| ||| |||||||||||||| | ||||| ||||||||||||||||||    
T  32767727 tctctcatactcacattattttttactttatctctctattgctatggtttccgtgtcaat 32767786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 39671113 - 39671058
Alignment:
Q  11 tcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||| |||||||||||||||||| | |||||||||| |||||||||||||    
T  39671113 tcatactcacattactttttactttatctctctattgttatgatttccgtgtcaat 39671058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8821675 - 8821740
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| ||||||||| ||||||||    
T  8821675 actttctctctcatactcacattattttttactttatctctctattgctatggtttctgtgtcaat 8821740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10206999 - 10206934
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| |||||||||||||||||| | | ||| ||||||||||||| ||||    
T  10206999 actttctctctcatactcacattactttttactttatctctctgttgctatggtttccgtgccaat 10206934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11633658 - 11633723
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||||||||| |||| |||||||||||||||||| | ||||| ||||||||||||| ||||    
T  11633658 actttctctctcatattcacattactttttactttatctctctattgctatggtttccgtgccaat 11633723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24482989 - 24482929
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||||| |||||| ||||    
T  24482989 actttctctctcatactcacattactttttactttatctctatattgttttggttttcgtg 24482929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 39907572 - 39907508
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaa 65  Q
    |||||||||||||||||||| ||| |||||||||||| | | ||||| |||| ||||||||||||    
T  39907572 actttttctctcatactcacattattttttactttatttctctattgctatgatttccgtgtcaa 39907508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 50206996 - 50206936
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||||| |||||| ||||    
T  50206996 actttctctctcatactcacattactttttactttatctctctattgttttggttttcgtg 50206936  T

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Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 44677504 - 44677445
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||| ||| |||||||||||||| | ||||| ||||||||||||| ||||    
T  44677504 tctctcatactcacattattttttactttatctctctattgctatggtttccgtgccaat 44677445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 54027993 - 54028052
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||||||||| || ||| |||||||||||||| | |||||||||| |||||||||||||    
T  54027993 tctctcatacttacattattttttactttatctctctattgttatgatttccgtgtcaat 54028052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26996361 - 26996424
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||  | ||||| ||||||||||||||||||    
T  26996361 actttctctctcatactcacattattttttactttatc--tctattgctatggtttccgtgtcaat 26996424  T

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Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34057979 - 34057941
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatct 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  34057979 actttctctctcatactcacgttactttttactttatct 34057941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 46253669 - 46253727
Alignment:
Q  3 tttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    |||||||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  46253669 tttttctctcatactcacattactttttactttatctctctattgctttggttttcgtg 46253727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30909074 - 30909139
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||||| ||| |||| |||||||||||||||||| | |||||||||||||| |||| ||||    
T  30909074 actttctctcttatattcacattactttttactttatctctctattgttatggttttcgtgccaat 30909139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 49417620 - 49417685
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||| ||||||| | ||||| ||||||||||||| ||||    
T  49417620 actttctctctcatactcacattattttttattttatctctctattgctatggtttccgtgccaat 49417685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 55013048 - 55013112
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||||| ||| |||| |||||||||| ||||||| ||||||| ||||||||||||||||||    
T  55013048 actttctctcttatattcacattacttttta-tttatctctttattgctatggtttccgtgtcaat 55013112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 16675546 - 16675506
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattg 47  Q
    ||||||||| ||||||||||||||||||||||| |||||||    
T  16675546 tctctcatattcacgttactttttactttatctctttattg 16675506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20080118 - 20080177
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||||| |||||||||||    
T  20080118 actttctctctcatactcacatta-tttttactttatctctctattgttttggtttccgtg 20080177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39697248 - 39697188
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  39697248 actttctctctcatactcacattactttttactttatctctctattgctttggttttcgtg 39697188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 47370467 - 47370519
Alignment:
Q  59 gtgtcaatttaacaacccagtttt-taaggctttcattaaatagacattttgt 110  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||| |||||||    
T  47370467 gtgtcaatttaacaacccatttttttaaggctttcgttaaatagatattttgt 47370519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 55400044 - 55400104
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  55400044 actttctctctcatactcacattactttttactttatctctctattgctttggttttcgtg 55400104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3281742 - 3281687
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggttt 56  Q
    ||||| ||||| |||||||| |||||||||||||||||| ||||||| | ||||||    
T  3281742 actttctctcttatactcacattactttttactttatctctttattgctttggttt 3281687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 33375911 - 33375970
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||| ||| |||||||||||||| | ||||| ||| ||||||||| ||||    
T  33375911 tctctcatactcacattattttttactttatctctctattgctatagtttccgtgccaat 33375970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46019507 - 46019562
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggttt 56  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| | ||||||    
T  46019507 actttctctctcatactcacattactttttactttatctctctattgctttggttt 46019562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21005202 - 21005164
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatct 39  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  21005202 actttctctcttatactcacgttactttttactttatct 21005164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 46984650 - 46984593
Alignment:
Q  9 tctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||  ||| ||| |||||||||| | ||||||||||||||||||| ||||    
T  46984650 tctcatactcatattattttctactttatctctctattgttatggtttccgtgccaat 46984593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19149034 - 19149090
Alignment:
Q  1 actttttctctcatactcacgtta-ctttttactttatctatttattgttatggttt 56  Q
    ||||| |||||||||||||| ||| ||||||||||| ||| ||||||||| ||||||    
T  19149034 actttctctctcatactcacattatctttttactttctctctttattgttttggttt 19149090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34662051 - 34662115
Alignment:
Q  1 actttttctctcatactcacgttac-tttttactttatctatttattgttatggtttccgtgtca 64  Q
    ||||| |||||||||||||| |||  ||||||||||||||||||||| || || ||| |||||||    
T  34662051 actttatctctcatactcacattatatttttactttatctatttattattttgattttcgtgtca 34662115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46852158 - 46852098
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||  |||||||||||||||| | | ||||||| |||||| ||||    
T  46852158 actttctctctcatactcatattactttttactttatttgtctattgttttggttttcgtg 46852098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 50638373 - 50638317
Alignment:
Q  5 tttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    |||||||||||||||| | | |||||||||||||| | ||||| | |||||||||||    
T  50638373 tttctctcatactcacataattttttactttatctctctattgctttggtttccgtg 50638317  T

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Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3610987 - 3610922
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||||||||| |||||||||||||||||| | ||||| ||||||||||||||||||    
T  3610987 actttttctctcatactcacattactttttactttatctctctattgctatggtttccgtgtcaat 3610922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34504065 - 34504130
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| |||||||| ||||||||| | ||||| ||||||||||||||||||    
T  34504065 actttctctctcatactcacattacttttcactttatctctctattgctatggtttccgtgtcaat 34504130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 11547549 - 11547490
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||| ||| |||||||||||||| | ||||| ||||||||||||||||||    
T  11547549 tctctcatactcacattattttttactttatctctctattgctatggtttccgtgtcaat 11547490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2075477 - 2075412
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||||||| ||||||||| ||||    
T  2075477 actttctctctcatactcacattattttttactttatctctctattgttatagtttccgtgccaat 2075412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 754464 - 754404
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    |||||||||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  754464 actttttctctcatactcacattactttttactttatctctctattgctttggttttcgtg 754404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3199005 - 3199070
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||| | ||||||| | ||||| ||||||||||||||||||    
T  3199005 actttctctctcatactcacattatttttcattttatctctatattgctatggtttccgtgtcaat 3199070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5028292 - 5028231
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgt 62  Q
    ||||| ||||| |||||||| |||||||||||||||||| ||||||| | |||||| |||||    
T  5028292 actttctctcttatactcacattactttttactttatctctttattgctttggttttcgtgt 5028231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13658877 - 13658942
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||| |||||||||| ||| ||||||||| |||| | ||||| ||||||||||||||||||    
T  13658877 actttctctttcatactcacattattttttacttgatctctctattgatatggtttccgtgtcaat 13658942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20822894 - 20822834
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  20822894 actttctctctcatactcacattactttttactttatctctctattgctttggttttcgtg 20822834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35213587 - 35213527
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  35213587 actttctctctcatactcacattactttttactttatctctctattgctttggttttcgtg 35213527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 2777336 - 2777283
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    |||||||||||||| ||||||||||| |||||| | ||||| |||||||||||||    
T  2777336 tctctcatactcacattactttttac-ttatctctctattgctatggtttccgtg 2777283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4820296 - 4820346
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttat 51  Q
    ||||| |||||||||||||| ||| |||||||||||||| | |||||||||    
T  4820296 actttctctctcatactcacattattttttactttatctctctattgttat 4820346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13143408 - 13143370
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatct 39  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  13143408 actttctctctcatactcacattactttttactttatct 13143370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18141327 - 18141289
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatct 39  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  18141327 actttctctctcatactcacattactttttactttatct 18141289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 22341194 - 22341141
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgt 60  Q
    |||||||||||||| | | |||||||||||||| | ||||| ||||||||||||    
T  22341194 tctctcatactcacatcattttttactttatctctctattgctatggtttccgt 22341141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 14986745 - 14986705
Alignment:
Q  26 tttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||| ||||||| ||||||||||||| ||||    
T  14986745 tttttactttatctctttattgctatggtttccgtgccaat 14986705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29163002 - 29162937
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||||||||||||||||| ||||    
T  29163002 actttctctctcatactcacattactttttactttatctctctattgttatggtttccgtgccaat 29162937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11353000 - 11352939
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgt 62  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||||| | |||||| |||||    
T  11353000 actttctctctcatactcacattactttttactttatctctttattgctttggttttcgtgt 11352939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13162964 - 13163029
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||  |||||||||||||||||| | ||||| ||||||||||||| ||||    
T  13162964 actttctctctcatactcatattactttttactttatctctctattgctatggtttccgtgccaat 13163029  T

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Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 38779770 - 38779705
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||||||||| ||| ||||||||| |||| | ||||| ||||||||||||| ||||    
T  38779770 actttttctctcatactcacattattttttacttcatctctctattgctatggtttccgtgccaat 38779705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39231754 - 39231689
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| ||||||||||||| ||||    
T  39231754 actttctctctcatactcacattattttttactttatctctctattgctatggtttccgtgccaat 39231689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39823854 - 39823919
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||||||||||| |||||| ||| |||||||||||||| | |||||||||  |||||||||||||    
T  39823854 actttttctctcacactcacattattttttactttatctttctattgttataatttccgtgtcaat 39823919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 41666940 - 41666883
Alignment:
Q  9 tctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||| |||||||||||||||||| | |||||||||||| |||||| ||||    
T  41666940 tctcatactcacattactttttactttatctctctattgttatggtgtccgtgccaat 41666883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 47078277 - 47078212
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| ||||||||||||| ||||    
T  47078277 actttctctctcatactcacattattttttactttatctctctattgctatggtttccgtgccaat 47078212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 32815215 - 32815278
Alignment:
Q  3 tttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||||||| ||| |||||||||||||| | ||||| ||||||||| ||| ||||    
T  32815215 tttttctctcatactcacattattttttactttatctctctattgctatggtttctgtgccaat 32815278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 20482574 - 20482627
Alignment:
Q  3 tttttctctcatactcacgttactttttactttatctatttattgttatggttt 56  Q
    |||||||||||||||||| ||| |||||||||||||| | ||||||| ||||||    
T  20482574 tttttctctcatactcactttattttttactttatctctctattgttttggttt 20482627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36019462 - 36019526
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| ||||||||| ||||||||    
T  36019462 actttctctctcatactcacatta-tttttactttatctctatattgctatggtttctgtgtcaat 36019526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39332030 - 39332095
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||||| |||||||| |||||||||||||||||| | ||||| |||| |||||||| ||||    
T  39332030 actttctctcttatactcacattactttttactttatctctctattgctatgatttccgtgccaat 39332095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40353309 - 40353374
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||| ||||||| | ||||| ||||||||||||| ||||    
T  40353309 actttctctctcatactcacattattttttattttatctctctattgctatggtttccgtgccaat 40353374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44184585 - 44184525
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  44184585 actttctctctcatactcacattactttttactttatctctctattgctttggttttcgtg 44184525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3062375 - 3062430
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggttt 56  Q
    ||||| ||||| |||||||| |||||||||||||||||| | ||||||| ||||||    
T  3062375 actttctctcttatactcacattactttttactttatctctctattgttttggttt 3062430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 37808784 - 37808725
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||||||||| || ||| |||||||||||||| | |||||||||| |||||||| ||||    
T  37808784 tctctcatacttacattattttttactttatctctctattgttatgctttccgtgccaat 37808725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 21023133 - 21023083
Alignment:
Q  11 tcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||| ||| |||||||||||||| | |||||||||||||||||||    
T  21023133 tcatattcacattattttttactttatctctctattgttatggtttccgtg 21023083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 33180730 - 33180676
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    |||||||||||||| ||| |||||||||||||| | ||||||| |||||| ||||    
T  33180730 tctctcatactcacattattttttactttatctctctattgttttggttttcgtg 33180676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19786105 - 19786040
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||| ||||||||| |||||||||||||||||| | ||||| | |||||| |||| ||||    
T  19786105 actttctctcacatactcacattactttttactttatctctctattgctctggttttcgtgccaat 19786040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41399189 - 41399128
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgt 62  Q
    ||||| |||||||||||||  ||| |||||||||||||| | ||||||| |||||| |||||    
T  41399189 actttatctctcatactcatattattttttactttatctctctattgttttggttttcgtgt 41399128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 46532547 - 46532608
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgt 62  Q
    ||||| || ||||||||||| ||| |||||||||||||| | ||||||| |||||| |||||    
T  46532547 actttctcactcatactcacattattttttactttatctctctattgttttggttttcgtgt 46532608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 13906458 - 13906418
Alignment:
Q  26 tttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||| | ||||||||||||||||||| ||||    
T  13906458 tttttactttatctctctattgttatggtttccgtgccaat 13906418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41893960 - 41894020
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| ||| |||||||||| |||||||||||||||||| | | ||||| |||||| ||||    
T  41893960 actttctctttcatactcacattactttttactttatctctctgttgttttggttttcgtg 41894020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 43573569 - 43573509
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| ||||||||| |||| |||||||||||||||||| | ||||| | |||||| ||||    
T  43573569 actttctctctcatattcacattactttttactttatctctctattgctttggttttcgtg 43573509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 46653088 - 46653048
Alignment:
Q  26 tttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||| ||||||| ||||||| ||||||||||||||||||    
T  46653088 tttttattttatctctttattgctatggtttccgtgtcaat 46653048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41569422 - 41569363
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgt 60  Q
    ||||| ||||||||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  41569422 actttctctctcatactcacgttactttttactttatctctctattgctatggtttccgt 41569363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9634462 - 9634402
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    |||||||||||||||||||| |||||||||||||||||| | ||||||| |||||| ||||    
T  9634462 actttttctctcatactcacattactttttactttatctctatattgttttggttttcgtg 9634402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6170675 - 6170735
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| ||||||||||||||||||||||||||||||||| | ||||| | |||||| ||||    
T  6170675 actttctctctcatactcacgttactttttactttatctctctattgctttggttttcgtg 6170735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 35705545 - 35705604
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||| |||  ||||||||||||| ||||||| |||||||| |||||||||    
T  35705545 tctctcatactcacattatattttactttatctctttattgctatggttttcgtgtcaat 35705604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 35589407 - 35589353
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    |||||||||||||| |||||||||||||||||| | ||||||| |||||| ||||    
T  35589407 tctctcatactcacattactttttactttatctctctattgttttggttttcgtg 35589353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 42223967 - 42223913
Alignment:
Q  12 catactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||||||| ||| |||||| ||||||| | ||||||||||||||||||||||||    
T  42223967 catactcacattaatttttattttatctttctattgttatggtttccgtgtcaat 42223913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 433895 - 433960
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| | | |||||||||||||| | ||||| |||| |||||||||||||    
T  433895 actttctctctcatactcacatcattttttactttatctctctattgctatgatttccgtgtcaat 433960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18176985 - 18177050
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| ||||| |||||||| | ||||| ||||||||||||| ||||    
T  18176985 actttctctctcatactcacattatttttttctttatctctctattgctatggtttccgtgccaat 18177050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 6941013 - 6941053
Alignment:
Q  26 tttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  6941013 tttttactttatctctttattgttatggtttccgtgccaat 6941053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6999094 - 6999034
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  6999094 actttctctctcatactcacattactttttactttatctctctattgctttggttttcgtg 6999034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13347841 - 13347781
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  13347841 actttctctctcatactcacattactttttactttatctctctattgctttggttttcgtg 13347781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 29712026 - 29712078
Alignment:
Q  4 ttttctctcatactcacgttactttttactttatctatttattgttatggttt 56  Q
    ||||||||||||||||| |||||||||||||||||| | ||||| | ||||||    
T  29712026 ttttctctcatactcacattactttttactttatctctctattgctttggttt 29712078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42678794 - 42678854
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| | |||||||||||    
T  42678794 actttctctctcatactcacattattttttactttatctctctattgctttggtttccgtg 42678854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 10711775 - 10711830
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgt 62  Q
    |||||||||||||| |||||||||||||||||| | ||||| | |||||| |||||    
T  10711775 tctctcatactcacattactttttactttatctctctattgctttggttttcgtgt 10711830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 29684638 - 29684591
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgt 48  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||||    
T  29684638 actttctctctcatactcaccttactttttactttatctttctattgt 29684591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13765445 - 13765483
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatct 39  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  13765445 actttctctctcatactcatgttactttttactttatct 13765483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18723639 - 18723685
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattg 47  Q
    ||||| |||||||||||||| ||| |||||||||||||| |||||||    
T  18723639 actttctctctcatactcacattattttttactttatctctttattg 18723685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 42866795 - 42866833
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatct 39  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  42866795 actttttctctcatactcacattattttttactttatct 42866833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 29879899 - 29879952
Alignment:
Q  13 atactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||| ||| |||| ||||||||| | |||||||||||||| |||||||||    
T  29879899 atactcacattatttttaactttatctctctattgttatggtttacgtgtcaat 29879952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34119678 - 34119617
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgt 62  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||||| || ||| |||||    
T  34119678 actttctctctcatactcacattattttttactttatctctctattgttttgattttcgtgt 34119617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2563749 - 2563809
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| ||||||||||| || || ||||||||||||||| | ||||||| |||||| ||||    
T  2563749 actttctctctcatacttacatttctttttactttatctttctattgttttggttttcgtg 2563809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9377501 - 9377561
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| ||||||||| |||| |||||||||||||||||| | ||||| | |||||| ||||    
T  9377501 actttctctctcatattcacattactttttactttatctctctattgctttggttttcgtg 9377561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28245773 - 28245833
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| | |||||| ||||    
T  28245773 actttctctctcatactcacattattttttactttatctctctattgctttggttttcgtg 28245833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30136041 - 30135976
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||||||||| |||| |||||||||||||||||| ||||||  ||||||||||||||||||    
T  30136041 actttctctctcatattcacattactttttactttatctctttattactatggtttccgtgtcaat 30135976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 40739936 - 40739873
Alignment:
Q  3 tttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||||||||||| |||| ||| |||||||||||||| | ||||||||||||||||||| ||||    
T  40739936 tttttctctcatattcacattattttttactttatctctctattgttatggtttccgtgccaat 40739873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6968259 - 6968193
Alignment:
Q  1 actttttctctcatactcacgttacttttt-actttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||||||||| ||||||||| | |||||||||||||||||| |||||    
T  6968259 actttctctctcatactcacattacttttttactttatctgtctattgttatggtttccgtatcaat 6968193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 7956033 - 7955975
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccg 59  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| |||||||||||    
T  7956033 actttctctctcatactcacattactttttactttatctctctattgctatggtttccg 7955975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7592894 - 7592959
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||||||||| |||| ||| |||||||||||||| | ||||| ||||||||||||||||||    
T  7592894 actttatctctcatagtcacattattttttactttatctctctattgctatggtttccgtgtcaat 7592959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12707194 - 12707255
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgt 62  Q
    ||||| ||||||||||||||||||||||||| ||||||| | ||||||| |||||| |||||    
T  12707194 actttctctctcatactcacgttactttttaatttatctctctattgttttggttttcgtgt 12707255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 45529272 - 45529207
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| ||||||||||||| ||||    
T  45529272 actttctctctcatactcacattattttttactttatctctctattgctatggtttccgtgccaat 45529207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11658026 - 11657966
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||| ||||||| | |||| ||||||||||||||    
T  11658026 actttctctctcatactcacattactttttattttatctctctattattatggtttccgtg 11657966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 33589250 - 33589191
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||| ||| |||||||||||||| |  |||||||||||||||||| ||||    
T  33589250 tctctcatactcacattattttttactttatctctccattgttatggtttccgtgccaat 33589191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 36110193 - 36110248
Alignment:
Q  11 tcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||| |||||||||||||||||| | |||||||||||||| |||| ||||    
T  36110193 tcatactcacattactttttactttatctctctattgttatggttttcgtgccaat 36110248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 41521019 - 41521078
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||| ||| ||||||||||||||  |||||| ||||||||| ||||||||    
T  41521019 tctctcatactcacattattttttactttatctcgttattgctatggtttctgtgtcaat 41521078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 1871634 - 1871580
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    |||||||||||||| ||| |||| ||||||||| | |||||||||||||||||||    
T  1871634 tctctcatactcacattatttttcactttatctctctattgttatggtttccgtg 1871580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1633916 - 1633851
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| ||||||||| ||| ||||    
T  1633916 actttctctctcatactcacattattttttactttatctctctattgctatggtttctgtgccaat 1633851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11017850 - 11017907
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttcc 58  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||||||| ||||||    
T  11017850 actttctctctcatactcacattattttttactttatctctctattgttatcgtttcc 11017907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16966830 - 16966895
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| ||| |||||||||| | ||||| ||||||||||||| ||||    
T  16966830 actttctctctcatactcacattattttctactttatctctctattgctatggtttccgtgccaat 16966895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 31596999 - 31597048
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggttt 56  Q
    |||||||||||||| |||||||||||||||||| | ||||||| ||||||    
T  31596999 tctctcatactcacattactttttactttatctctctattgttttggttt 31597048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32843967 - 32843903
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||| ||||||| ||| |||||||||||||| | ||||| ||||||||||||| ||||    
T  32843967 actttttctctcttactcacatta-tttttactttatctctctattgctatggtttccgtgccaat 32843903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36531640 - 36531705
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||||||| |||||||||  ||| |||||||||||||| | |||||||||| |||||||| ||||    
T  36531640 actttttctttcatactcatattattttttactttatctctctattgttatgatttccgtgccaat 36531705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37783997 - 37783932
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||  |||||||||||||||||| | ||||| || | |||||||||||||    
T  37783997 actttctctctcatactcagattactttttactttatctctctattgctaggatttccgtgtcaat 37783932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2733033 - 2733092
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    |||||||||||||||||||| ||| |||||||||||||| | |||| || |||||||||||    
T  2733033 actttttctctcatactcacatta-tttttactttatctctctattattttggtttccgtg 2733092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4994426 - 4994486
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| | |||||||||||    
T  4994426 actttatctctcatactcacattattttttactttatctctctattgatttggtttccgtg 4994486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4658289 - 4658234
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggttt 56  Q
    ||||||||||||||||| || |||||||||||||||||| | ||||| | ||||||    
T  4658289 actttttctctcatacttacattactttttactttatctctctattgctttggttt 4658234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 7478831 - 7478890
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||| ||| ||||||| |||||| | ||||| ||||||||||||| ||||    
T  7478831 tctctcatactcacattattttttaccttatctctctattgctatggtttccgtgccaat 7478890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16327178 - 16327123
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggttt 56  Q
    ||||| |||||||||||||| |||||||||||||||||| | |||| || ||||||    
T  16327178 actttctctctcatactcacattactttttactttatctctctattattttggttt 16327123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7473052 - 7473014
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatct 39  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  7473052 actttctctctcatactcacattactttttactttatct 7473014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16613679 - 16613717
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatct 39  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  16613679 actttttctctcatactcacattattttttactttatct 16613717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42569755 - 42569709
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattg 47  Q
    ||||| ||||||||| |||| |||||||||||||||||| |||||||    
T  42569755 actttctctctcatattcacattactttttactttatctctttattg 42569709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36885513 - 36885449
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| ||||||| | || ||| |||||||||    
T  36885513 actttctctctcatactcacatta-tttttactttatctctttattgctttgattttcgtgtcaat 36885449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 41701214 - 41701255
Alignment:
Q  8 ctctcatactcacgttactttttactttatctatttattgtt 49  Q
    ||||||||||||| ||| |||||||||||||||| |||||||    
T  41701214 ctctcatactcacattaatttttactttatctatctattgtt 41701255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12898956 - 12898900
Alignment:
Q  1 actttttctctcatactcacgtta-ctttttactttatctatttattgttatggttt 56  Q
    |||||||||||||||||||| ||| ||||||||||||||| | ||||| | ||||||    
T  12898956 actttttctctcatactcacattatctttttactttatctctctattgctttggttt 12898900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 36568006 - 36568058
Alignment:
Q  4 ttttctctcatactcacgttactttttactttatctatttattgttatggttt 56  Q
    ||||||||||||||||| ||| |||||||||||||| | ||||| | ||||||    
T  36568006 ttttctctcatactcacattattttttactttatctctctattgctttggttt 36568058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41159915 - 41159855
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| | |||||| ||||    
T  41159915 actttctctctcatactcacattattttttactttatctctctattgctttggttttcgtg 41159855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8267846 - 8267781
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| |  |||||||||||||||||||||||    
T  8267846 actttctctctcatactcacattattttttactttatctctccattgttatggtttccgtgtcaat 8267781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21064252 - 21064187
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||||||||||||||||||   |||||||||| |||||||||||||    
T  21064252 actttctctctcatactcacattactttttactttatctccctattgttatgatttccgtgtcaat 21064187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4430962 - 4430897
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||||||||| | | |||||||||||||| | ||||| |||||||| |||||||||    
T  4430962 actttttctctcatactcacatcattttttactttatctctctattgctatggttttcgtgtcaat 4430897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 35099031 - 35098966
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| ||| ||||||||||||||    
T  35099031 actttctctctcatactcacattattttttactttatctctctattgctatagtttccgtgtcaat 35098966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 32912089 - 32912144
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgt 62  Q
    |||||||||||||| |||||||||||||||| ||| ||||||| |||||| |||||    
T  32912089 tctctcatactcacattactttttactttatttatctattgttttggttttcgtgt 32912144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 33620655 - 33620718
Alignment:
Q  3 tttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||||||||||||| |  ||| |||||||||||||| | ||||| ||||||||||||||||||    
T  33620655 tttttctctcatacttatattattttttactttatctctctattgctatggtttccgtgtcaat 33620718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 43214076 - 43214025
Alignment:
Q  10 ctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||||||||| |||||||||||||||||| ||||||||| |||||| ||||    
T  43214076 ctcatactcacattactttttactttatctctttattgttttggttttcgtg 43214025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42267390 - 42267456
Alignment:
Q  1 actttttctctcatactcacgttac-tttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||||| ||| |||  |||||||||||||| | |||||||||| |||||||||||||    
T  42267390 actttttctctcatacacacattatatttttactttatctctctattgttatgatttccgtgtcaat 42267456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 5042293 - 5042358
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||  ||||||||||||| ||||    
T  5042293 actttatctctcatactcacattattttttactttatctctctattactatggtttccgtgccaat 5042358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6931085 - 6931020
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||| |||||||||| ||| |||||||||||||| | ||||| |||| |||||||||||||    
T  6931085 actttatctttcatactcacattattttttactttatctctctattgctatgatttccgtgtcaat 6931020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15267829 - 15267894
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||||||||| |||  ||| |||||||||||||| | |||||||||||||| |||||||||    
T  15267829 actttctctctcatattcatattattttttactttatctctctattgttatggttttcgtgtcaat 15267894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18842347 - 18842282
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| |||||||| |||| ||||    
T  18842347 actttctctctcatactcacattattttttactttatctctctattgctatggttttcgtgccaat 18842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19481208 - 19481155
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggt 54  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||||| ||||    
T  19481208 actttctctctcatactcacattactttttactttatctctctattgttttggt 19481155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 37700505 - 37700570
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| ||||||| |||||| | ||||| ||||||||||||| ||||    
T  37700505 actttctctctcatactcacattattttttaccttatctctctattgctatggtttccgtgccaat 37700570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 189729 - 189669
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  189729 actttctctctcatactcacattactttttactttatctctctattgctttggttttcgtg 189669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1839371 - 1839311
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||||| |||||| ||||    
T  1839371 actttctctctcatactcacattattttttactttatctttctattgttttggttttcgtg 1839311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6517757 - 6517817
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  6517757 actttctctctcatactcacattactttttactttatctctctattgctttggttttcgtg 6517817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9581624 - 9581684
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| ||| |||||||||| ||| |||||||||||||| | ||||||| |||||||||||    
T  9581624 actttctctttcatactcacattattttttactttatctctctattgttttggtttccgtg 9581684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43441783 - 43441843
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  43441783 actttctctctcatactcacattactttttactttatctctctattgctttggttttcgtg 43441843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 5821636 - 5821573
Alignment:
Q  3 tttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||||||||||||| || ||| |||||||||||||| | ||| | ||||||||||||| ||||    
T  5821636 tttttctctcatacttacattattttttactttatctctctatagctatggtttccgtgccaat 5821573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21136308 - 21136363
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggttt 56  Q
    ||||| ||| |||||||||||||| |||||||||||||| | ||||||| ||||||    
T  21136308 actttctctttcatactcacgttattttttactttatctctctattgttttggttt 21136363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20770176 - 20770241
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| | || ||| |||||||||    
T  20770176 actttctctctcatactcacattattttttactttatctctctattgctttgattttcgtgtcaat 20770241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6446544 - 6446508
Alignment:
Q  1 actttttctctcatactcacgttactttttactttat 37  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  6446544 actttctctctcatactcacattactttttactttat 6446508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 8675453 - 8675421
Alignment:
Q  7 tctctcatactcacgttactttttactttatct 39  Q
    |||||||||||||| ||||||||||||||||||    
T  8675453 tctctcatactcacattactttttactttatct 8675421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9226346 - 9226405
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||||| || ||||||||    
T  9226346 actttctctctcatactcacatta-tttttactttatctctctattgttttgatttccgtg 9226405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 14451438 - 14451503
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | |||||||||||||| |||||||||    
T  14451438 actttctctctcatactcacattagtttttactttatctctctattgttatggttttcgtgtcaat 14451503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21260343 - 21260408
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||||||||| ||| ||||| |||||||| | ||||||||||||||||||| ||||    
T  21260343 actttttctctcatactcacattatttttttctttatctctctattgttatggtttccgtgccaat 21260408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41486169 - 41486104
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| ||||||||||||| ||||    
T  41486169 actttctctctcatactcacattactttttactttatctctctattgctatggtttccgtgccaat 41486104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 624338 - 624273
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| |||||||| |||| ||||    
T  624338 actttctctctcatactcacattactttttactttatctctctattgctatggttttcgtgccaat 624273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6141804 - 6141739
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||||| |||||||||||| ||||||| |||| |||||||| ||||    
T  6141804 actttctctctcatactcacattactctttactttatctctttattgctatgatttccgtgccaat 6141739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 26206997 - 26206940
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtca 64  Q
    ||||||||| |||| |||||||||||||||||| | ||||||||||||||| ||||||    
T  26206997 tctctcatattcacattactttttactttatctctctattgttatggtttctgtgtca 26206940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22819694 - 22819740
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattg 47  Q
    ||||| |||||||||||||| |||||||||||||||||| |||||||    
T  22819694 actttctctctcatactcacattactttttactttatctctttattg 22819740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36111422 - 36111356
Alignment:
Q  1 actttttctctcatactcacgttacttttt-actttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||||||||| ||||||||| | ||||| ||||||||||||| ||||    
T  36111422 actttatctctcatactcacattacttttttactttatctctctattgctatggtttccgtgccaat 36111356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 47965784 - 47965822
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatct 39  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  47965784 actttttctctcatactcacattactttttactttatct 47965822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6494919 - 6494854
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||||||||| |||  ||| |||||||||||| | | ||||||||||||||||||||||||    
T  6494919 actttctctctcatattcatattattttttactttatttctctattgttatggtttccgtgtcaat 6494854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30079891 - 30079956
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| ||| ||||||||| ||||    
T  30079891 actttctctctcatactcacattattttttactttatctctctattgctatagtttccgtgccaat 30079956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31076099 - 31076164
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| | | |||||||||||||| | ||||  ||||||||||||||||||    
T  31076099 actttctctctcatactcacatcattttttactttatctctctattactatggtttccgtgtcaat 31076164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31657691 - 31657752
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgt 62  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| | |||||| |||||    
T  31657691 actttctctctcatactcacattactttttactttatctctctattgctttggttttcgtgt 31657752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 51194314 - 51194379
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||| |||||||||| | |||||||||||||||| | |||||||||||||| |||| ||||    
T  51194314 actttctctttcatactcacatcactttttactttatctctctattgttatggttttcgtgccaat 51194379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 51746277 - 51746330
Alignment:
Q  13 atactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||| ||| |||||||||||||| | ||||||||||||||||||| ||||    
T  51746277 atactcacattattttttactttatctctctattgttatggtttccgtgccaat 51746330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14010144 - 14010084
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    |||||||||||||||||||  |||||||||||||||||| | |||| || |||||| ||||    
T  14010144 actttttctctcatactcatattactttttactttatctctctattattttggttttcgtg 14010084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28657467 - 28657407
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| | |||||||||||    
T  28657467 actttctctctcatactcacattattttttactttatctctctattgctttggtttccgtg 28657407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39345006 - 39344946
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  39345006 actttctctctcatactcacattactttttactttatctctctattgctttggttttcgtg 39344946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43769756 - 43769804
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgtt 49  Q
    ||||| |||||||||||||| ||| |||||||||||||| |||||||||    
T  43769756 actttctctctcatactcacattattttttactttatctctttattgtt 43769804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 21172331 - 21172390
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||||| |||||| |||||||||||||| ||||||||| |||||| ||| |||||    
T  21172331 tctcttatacttacgttattttttactttatctctttattgttttggttttcgtatcaat 21172390  T

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Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 25318085 - 25318027
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||  ||| |||||||||||||| ||||||| | ||||||||||||||||    
T  25318085 tctctcatactcatattattttttactttatctctttattgct-tggtttccgtgtcaat 25318027  T

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Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30170046 - 30169991
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggttt 56  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| ||||||||    
T  30170046 actttctctctcatactcacattattttttactttatctctctattgctatggttt 30169991  T

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Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 53152345 - 53152282
Alignment:
Q  3 tttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||||||||||| |||  ||| |||||||||||||| | ||||||||||||||| ||| ||||    
T  53152345 tttttctctcatattcatattattttttactttatctctatattgttatggtttctgtgccaat 53152282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17683269 - 17683323
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtt 55  Q
    ||||| ||||| |||||||| |||||||||||||||||| | ||||||| |||||    
T  17683269 actttctctcttatactcacattactttttactttatctctctattgttttggtt 17683323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 33899341 - 33899287
Alignment:
Q  12 catactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||||||| ||| ||||| |||||||| | ||||||||||||||||||| ||||    
T  33899341 catactcacattatttttttctttatctctctattgttatggtttccgtgccaat 33899287  T

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Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38338948 - 38338910
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatct 39  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  38338948 actttctctctcatactcacattactttttactttatct 38338910  T

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Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42959316 - 42959382
Alignment:
Q  1 actttttctctcatactcacgttactttt-tactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||||| |||||||| ||| |||| |||||||||| | ||||| ||||||||||||||||||    
T  42959316 actttatctcttatactcacattatttttttactttatctctctattgctatggtttccgtgtcaat 42959382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 46406000 - 46405962
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatct 39  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  46406000 actttttctctcatactcacattaatttttactttatct 46405962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 52846253 - 52846215
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatct 39  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  52846253 actttctctctcatactcacattactttttactttatct 52846215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5932183 - 5932119
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| ||||| |||||||| | ||||| ||||||||||||| ||||    
T  5932183 actttctctctcatactcacattatttttt-ctttatctttctattgctatggtttccgtgccaat 5932119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12112672 - 12112737
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||||||||| |||  ||| |||||||||||||| | ||||| |||| |||||||||||||    
T  12112672 actttctctctcatattcatattattttttactttatctctctattgctatgatttccgtgtcaat 12112737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28458403 - 28458338
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| | || ||| |||||||||    
T  28458403 actttctctctcatactcacattattttttactttatctctctattgctttgattttcgtgtcaat 28458338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 37066033 - 37066098
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||||||| |||||||||| ||| |||||||||||||| |  |||| |||| |||||||| ||||    
T  37066033 actttttctttcatactcacattattttttactttatctctccattgctatgatttccgtgccaat 37066098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 17475947 - 17475987
Alignment:
Q  26 tttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||| | ||||| ||||||||||||||||||    
T  17475947 tttttactttatctctctattgctatggtttccgtgtcaat 17475987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17683392 - 17683440
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgtt 49  Q
    ||||| |||||||||||||  |||||||||||||||||| | |||||||    
T  17683392 actttatctctcatactcatattactttttactttatctctctattgtt 17683440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21617228 - 21617276
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgtt 49  Q
    ||||| |||||||||||||| ||| |||||||||||||| | |||||||    
T  21617228 actttctctctcatactcacattattttttactttatctctctattgtt 21617276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 26718419 - 26718451
Alignment:
Q  7 tctctcatactcacgttactttttactttatct 39  Q
    |||||||||||||| ||||||||||||||||||    
T  26718419 tctctcatactcacattactttttactttatct 26718451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 26731047 - 26731079
Alignment:
Q  7 tctctcatactcacgttactttttactttatct 39  Q
    |||||||||||||| ||||||||||||||||||    
T  26731047 tctctcatactcacattactttttactttatct 26731079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33860692 - 33860751
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| | | |||||||||||||| | ||||||| |||||||||||    
T  33860692 actttctctctcatactcacatca-tttttactttatctctctattgttttggtttccgtg 33860751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21340567 - 21340632
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||| |||||||||| |||||||||||||||||| | ||||| ||||||||||||||||||    
T  21340567 actttctctttcatactcacattactttttactttatctctctattgctatggtttccgtgtcaat 21340632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36673757 - 36673692
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||||||||||||| |||| |||||||||||||| | ||||| ||||||||||||||||||    
T  36673757 actttctctctcatactcatgttattttttactttatctctctattgctatggtttccgtgtcaat 36673692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 46082147 - 46082082
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||| ||||||||| |||||||||||||||||| | ||||| ||||||||||||||||||    
T  46082147 actttctctcgcatactcacattactttttactttatctctctattgctatggtttccgtgtcaat 46082082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 47214253 - 47214318
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||||||||||||||||| ||||    
T  47214253 actttctctctcatactcacattattttttactttatctctctattgttatggtttccgtgccaat 47214318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 51191833 - 51191898
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||||||||| |||| ||||||||||||| | |||||||||| |||||||| ||||    
T  51191833 actttttctctcatactcacattacattttactttatctctctattgttatgctttccgtgccaat 51191898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 26837503 - 26837562
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||| ||||| ||||||||    
T  26837503 tctctcatactcacgttactttttactttatctctctattgctatagtttctgtgtcaat 26837562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3603156 - 3603221
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| |||||||||| ||||||| | ||||| ||||||||||||| ||||    
T  3603156 actttctctctcatactcacattactttttagtttatctctctattgctatggtttccgtgccaat 3603221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8411744 - 8411679
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||||| ||||||||||| ||||    
T  8411744 actttctctctcatactcacattattttttactttatctctctattgttttggtttccgtgccaat 8411679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16986983 - 16987048
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| |||| |||||||||||||    
T  16986983 actttctctctcatactcacattattttttactttatctttctattgctatgatttccgtgtcaat 16987048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21486343 - 21486278
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| ||||||||||||| ||||    
T  21486343 actttctctctcatactcacattattttttactttatctctctattgctatggtttccgtgccaat 21486278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36779295 - 36779230
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||||| ||||||||| || |||||||||||||||||| | ||||| |||| |||||||||||||    
T  36779295 actttttttctcatacttacattactttttactttatctctctattgctatgatttccgtgtcaat 36779230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 902683 - 902743
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| |||| ||||||||    
T  902683 actttctctctcatactcacattactttttactttatctctctattgctatgatttccgtg 902743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32915098 - 32915038
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||||| |||||| ||||    
T  32915098 actttctctctcatactcacattactttttactttatctctctattgttttggttttcgtg 32915038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34254377 - 34254317
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||||| | |||||| ||||    
T  34254377 actttatctctcatactcacattactttttactttatctctttattgctttggttttcgtg 34254317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 52714919 - 52714867
Alignment:
Q  9 tctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||||||||||||||||||||||||||||| | ||||||| |||||| ||||    
T  52714919 tctcatactcacgttactttttactttatctctctattgttttggttttcgtg 52714867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36577438 - 36577392
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattg 47  Q
    ||||| |||||||||||||| |||||||||||||||||| |||||||    
T  36577438 actttctctctcatactcacattactttttactttatctctttattg 36577392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 756909 - 756966
Alignment:
Q  9 tctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||| ||| |||||||||||||| | ||||| ||||||||||||| ||||    
T  756909 tctcatactcacattattttttactttatctctctattgctatggtttccgtgccaat 756966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20565144 - 20565079
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||||| |||||||||||| | ||||  ||||||||||||| ||||    
T  20565144 actttctctctcatactcacattactctttactttatctctctattactatggtttccgtggcaat 20565079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 26585893 - 26585840
Alignment:
Q  13 atactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||| ||| |||||||||||||  | ||||||||||||||||||||||||    
T  26585893 atactcacattattttttactttatcgctctattgttatggtttccgtgtcaat 26585840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33024597 - 33024532
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| ||||| |||||||| | ||||| ||||||||||||| ||||    
T  33024597 actttctctctcatactcacattatttttttctttatctctctattgctatggtttccgtgccaat 33024532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44632573 - 44632638
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| ||| | ||||||||||||    
T  44632573 actttctctctcatactcacattattttttactttatctctctattgctatagattccgtgtcaat 44632638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 51286393 - 51286328
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||||| ||||||| | ||||| ||||||||||||| ||||    
T  51286393 actttctctctcatactcacattattttttattttatctctctattgctatggtttccgtgccaat 51286328  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13489707 - 13489767
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  13489707 actttctctctcatactcacattactttttactttatctctctattgctttggttttcgtg 13489767  T

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Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15705088 - 15705028
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||  | ||||||| |||||| ||||    
T  15705088 actttctctctcatactcacattactttttactttatcattctattgttttggttttcgtg 15705028  T

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Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19969588 - 19969528
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  19969588 actttctctctcatactcacattactttttactttatctctctattgctttggttttcgtg 19969528  T

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Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 50328167 - 50328107
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| ||| ||||||||||||||||||||||||||||| | ||||| | |||||| ||||    
T  50328167 actttctctttcatactcacgttactttttactttatctctctattgctttggttttcgtg 50328107  T

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Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 50781596 - 50781536
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  50781596 actttctctctcatactcacattactttttactttatctctctattgctttggttttcgtg 50781536  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 3024770 - 3024711
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||||  ||| |||||||||||||| | ||||| ||||||||||||| ||||    
T  3024770 tctctcatactcatattattttttactttatctctctattgctatggtttccgtgccaat 3024711  T

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Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 29586044 - 29586095
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttcc 58  Q
    |||||||||||||| ||| |||||||||||||| | |||| |||||||||||    
T  29586044 tctctcatactcacattattttttactttatctctctattattatggtttcc 29586095  T

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Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10890072 - 10890034
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatct 39  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  10890072 actttctctctcatactcacattactttttactttatct 10890034  T

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Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 40316964 - 40316910
Alignment:
Q  7 tctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    |||||||||||||| |||||||||||||||||| | ||||| | |||||| ||||    
T  40316964 tctctcatactcacattactttttactttatctctctattgctttggttttcgtg 40316910  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1790553 - 1790618
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||  |||||||||||||||||  | ||||| || |||||||||| ||||    
T  1790553 actttctctctcatactcaaattactttttactttatccctctattgataaggtttccgtgccaat 1790618  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1852977 - 1852912
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| ||||| |||| ||| | ||||| ||||||||||||| ||||    
T  1852977 actttctctctcatactcacattatttttttctttgtctctctattgctatggtttccgtgccaat 1852912  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 4514472 - 4514415
Alignment:
Q  9 tctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||||| |||| ||| |||||||||||||| | ||||| ||||||||||||| ||||    
T  4514472 tctcatattcacattattttttactttatctttctattgctatggtttccgtgccaat 4514415  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32319335 - 32319270
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||||| ||| |||| |||| |||| | ||||  ||||||||||||||||||    
T  32319335 actttctctctcatactcacattatttttcacttcatctctctattactatggtttccgtgtcaat 32319270  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 38303714 - 38303649
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| |||||||||||| | ||| |||||||||||||| | |||||  |||||||||||| ||||    
T  38303714 actttctctctcatactcgcattattttttactttatctctctattgccatggtttccgtgccaat 38303649  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9008270 - 9008326
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttc 57  Q
    ||||| |||||||||||||| ||| |||||||||||||| | |||||  ||||||||    
T  9008270 actttctctctcatactcacattattttttactttatctctctattgccatggtttc 9008326  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29147899 - 29147840
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| ||||| |||||||||| | |||||||||||||| | ||||||| |||||||||||    
T  29147899 actttctctcttatactcacgtca-tttttactttatctctctattgttttggtttccgtg 29147840  T

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Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 33125348 - 33125296
Alignment:
Q  4 ttttctctcatactcacgttactttttactttatctatttattgttatggttt 56  Q
    |||||| |||||||||| |||||||||||||||||| | ||||| | ||||||    
T  33125348 ttttctttcatactcacattactttttactttatctttctattgctttggttt 33125296  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 52362527 - 52362587
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||| |||||||||||||| ||| |||||||||||||| | ||||| | |||||| ||||    
T  52362527 actttctctctcatactcacattattttttactttatctctctattgctttggttttcgtg 52362587  T

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Target: scaffold0687 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2242 - 2307
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    ||||| ||||||||| |||| ||| |||||||||||||| | ||||| ||||||||||||||||||    
T  2242 actttatctctcatagtcacattattttttactttatctctctattgctatggtttccgtgtcaat 2307  T

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Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 134321 - 134264
Alignment:
Q  9 tctcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||||| ||| |||||||||||||| ||||||||| |||||| |||||||||    
T  134321 tctcatactcacattattttttactttatctctttattgttttggttttcgtgtcaat 134264  T

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Target: scaffold0471 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 62 - 117
Alignment:
Q  11 tcatactcacgttactttttactttatctatttattgttatggtttccgtgtcaat 66  Q
    |||||||||| |||||||||||||||||| | |||||||||||||| |||| ||||    
T  62 tcatactcacattactttttactttatctctctattgttatggttttcgtgccaat 117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 38478 - 38530
Alignment:
Q  9 tctcatactcacgttactttttactttatctatttattgttatggtttccgtg 61  Q
    ||||||||||||||||||||||||||||||| | ||||| | |||||| ||||    
T  38478 tctcatactcacgttactttttactttatctctctattgctttggttttcgtg 38530  T

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Target: scaffold0532 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11009 - 11057
Alignment:
Q  1 actttttctctcatactcacgttactttttactttatctatttattgtt 49  Q
    ||||| |||||||||||||| ||| |||||||||||||| | |||||||    
T  11009 actttctctctcatactcacattattttttactttatctctctattgtt 11057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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