View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14504_low_27 (Length: 349)

Name: NF14504_low_27
Description: NF14504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14504_low_27
NF14504_low_27
[»] chr5 (35 HSPs)
chr5 (1-140)||(2268051-2268190)
chr5 (150-282)||(16472991-16473128)
chr5 (150-281)||(15855879-15856015)
chr5 (150-280)||(35420612-35420747)
chr5 (150-280)||(20476467-20476602)
chr5 (184-280)||(33629345-33629446)
chr5 (150-285)||(13754286-13754426)
chr5 (150-280)||(1138595-1138730)
chr5 (228-285)||(2268724-2268781)
chr5 (150-251)||(21261979-21262085)
chr5 (184-248)||(24397278-24397346)
chr5 (151-285)||(21259725-21259864)
chr5 (184-228)||(19976332-19976376)
chr5 (198-281)||(21591212-21591300)
chr5 (198-281)||(21595329-21595417)
chr5 (185-280)||(37552308-37552408)
chr5 (150-280)||(4266018-4266153)
chr5 (150-228)||(12744862-12744940)
chr5 (305-345)||(2268818-2268858)
chr5 (228-280)||(15855843-15855895)
chr5 (228-280)||(35420731-35420783)
chr5 (151-223)||(735313-735385)
chr5 (150-277)||(12807947-12808079)
chr5 (185-250)||(37655182-37655252)
chr5 (184-228)||(780851-780895)
chr5 (228-276)||(8364749-8364797)
chr5 (228-276)||(16472959-16473007)
chr5 (184-228)||(35276349-35276393)
chr5 (150-222)||(1456085-1456157)
chr5 (191-238)||(34513465-34513512)
chr5 (228-278)||(24397365-24397415)
chr5 (192-225)||(1384388-1384421)
chr5 (184-280)||(43539177-43539278)
chr5 (228-276)||(10132373-10132421)
chr5 (228-280)||(20476431-20476483)
[»] chr7 (42 HSPs)
chr7 (150-281)||(45997507-45997643)
chr7 (150-282)||(38883257-38883394)
chr7 (184-281)||(31231613-31231715)
chr7 (150-281)||(24836056-24836192)
chr7 (184-283)||(20184235-20184339)
chr7 (150-280)||(3953042-3953177)
chr7 (184-277)||(30594763-30594861)
chr7 (150-280)||(34052315-34052450)
chr7 (150-280)||(35339278-35339413)
chr7 (184-281)||(24123754-24123856)
chr7 (150-276)||(30259070-30259201)
chr7 (185-276)||(10398390-10398486)
chr7 (150-284)||(10936466-10936605)
chr7 (184-280)||(39617841-39617942)
chr7 (184-280)||(47237433-47237526)
chr7 (150-281)||(9285713-9285849)
chr7 (150-281)||(9289780-9289916)
chr7 (184-276)||(33749714-33749810)
chr7 (184-279)||(39143713-39143813)
chr7 (150-252)||(48103404-48103508)
chr7 (184-258)||(31521547-31521626)
chr7 (184-280)||(12142263-12142364)
chr7 (150-228)||(40358151-40358229)
chr7 (150-280)||(25742435-25742566)
chr7 (228-280)||(38883221-38883273)
chr7 (150-228)||(37093804-37093882)
chr7 (228-280)||(10936589-10936641)
chr7 (228-280)||(30259185-30259237)
chr7 (228-280)||(31231735-31231787)
chr7 (228-280)||(33721827-33721879)
chr7 (228-276)||(38528394-38528442)
chr7 (184-228)||(38528467-38528511)
chr7 (228-280)||(38528531-38528583)
chr7 (185-227)||(1402990-1403032)
chr7 (228-282)||(12142190-12142244)
chr7 (185-227)||(25572883-25572925)
chr7 (228-281)||(29277837-29277890)
chr7 (228-281)||(34052278-34052331)
chr7 (191-224)||(44148724-44148757)
chr7 (228-276)||(7954985-7955033)
chr7 (228-280)||(20184358-20184410)
chr7 (228-280)||(35665633-35665685)
[»] chr1 (58 HSPs)
chr1 (150-284)||(14387011-14387150)
chr1 (150-280)||(50627167-50627302)
chr1 (150-280)||(19954911-19955046)
chr1 (191-280)||(36880588-36880682)
chr1 (150-279)||(1387814-1387948)
chr1 (150-278)||(5189505-5189638)
chr1 (150-280)||(27240924-27241059)
chr1 (150-279)||(3607730-3607864)
chr1 (184-283)||(27926248-27926351)
chr1 (184-282)||(9978049-9978152)
chr1 (150-280)||(2854532-2854667)
chr1 (150-280)||(23698502-23698637)
chr1 (150-279)||(19796982-19797116)
chr1 (184-280)||(40647188-40647289)
chr1 (184-280)||(47940570-47940671)
chr1 (184-278)||(15324697-15324796)
chr1 (150-280)||(42561295-42561430)
chr1 (184-280)||(26208495-26208596)
chr1 (184-280)||(51276695-51276796)
chr1 (184-251)||(6079454-6079526)
chr1 (150-281)||(27670179-27670316)
chr1 (150-280)||(48954214-48954349)
chr1 (150-228)||(9895289-9895367)
chr1 (184-276)||(27928302-27928398)
chr1 (184-280)||(51789597-51789698)
chr1 (192-235)||(39015243-39015286)
chr1 (154-226)||(48645073-48645145)
chr1 (184-276)||(49284298-49284395)
chr1 (184-228)||(957659-957703)
chr1 (184-228)||(4299449-4299493)
chr1 (184-276)||(28244028-28244119)
chr1 (185-233)||(36007872-36007920)
chr1 (228-280)||(42561414-42561466)
chr1 (228-280)||(50627131-50627183)
chr1 (228-280)||(51789714-51789766)
chr1 (183-225)||(29598392-29598434)
chr1 (228-278)||(50162658-50162708)
chr1 (228-285)||(23698621-23698678)
chr1 (228-285)||(25297966-25298023)
chr1 (184-280)||(50162538-50162639)
chr1 (192-228)||(2302481-2302517)
chr1 (228-280)||(5189469-5189521)
chr1 (228-280)||(19797100-19797152)
chr1 (228-280)||(19955030-19955082)
chr1 (228-280)||(49285094-49285146)
chr1 (150-281)||(2125069-2125205)
chr1 (228-279)||(9978171-9978222)
chr1 (228-282)||(27926371-27926425)
chr1 (184-281)||(50856320-50856422)
chr1 (228-285)||(3607848-3607905)
chr1 (228-280)||(2854651-2854703)
chr1 (228-280)||(4299514-4299566)
chr1 (228-280)||(15324626-15324678)
chr1 (185-225)||(18651310-18651350)
chr1 (193-233)||(22339036-22339076)
chr1 (228-280)||(29598456-29598508)
chr1 (228-280)||(47940690-47940742)
chr1 (228-280)||(48954333-48954385)
[»] chr6 (25 HSPs)
chr6 (184-280)||(14393634-14393735)
chr6 (150-280)||(11687143-11687278)
chr6 (150-280)||(15546668-15546803)
chr6 (150-280)||(21379941-21380076)
chr6 (184-279)||(7808679-7808779)
chr6 (150-280)||(8091098-8091233)
chr6 (184-282)||(17367062-17367158)
chr6 (150-280)||(885421-885556)
chr6 (150-228)||(3369021-3369099)
chr6 (184-280)||(4890480-4890581)
chr6 (184-275)||(4238924-4239020)
chr6 (150-280)||(13172574-13172708)
chr6 (184-249)||(13439766-13439836)
chr6 (150-252)||(20501742-20501849)
chr6 (150-282)||(18998115-18998252)
chr6 (186-276)||(29609073-29609168)
chr6 (228-281)||(11687262-11687315)
chr6 (228-280)||(885385-885437)
chr6 (185-257)||(7187633-7187710)
chr6 (228-280)||(6433690-6433742)
chr6 (228-280)||(15546632-15546684)
chr6 (228-280)||(21380060-21380112)
chr6 (191-249)||(31764356-31764419)
chr6 (228-285)||(3368980-3369037)
chr6 (228-280)||(4890600-4890652)
[»] chr4 (35 HSPs)
chr4 (150-280)||(530669-530804)
chr4 (184-280)||(4552855-4552956)
chr4 (184-280)||(42274492-42274593)
chr4 (150-280)||(18417693-18417828)
chr4 (151-280)||(55107561-55107695)
chr4 (184-279)||(32318721-32318821)
chr4 (150-280)||(1298948-1299083)
chr4 (150-280)||(13204413-13204548)
chr4 (150-280)||(21048705-21048839)
chr4 (184-280)||(24915794-24915895)
chr4 (150-282)||(20435138-20435275)
chr4 (184-284)||(27434680-27434785)
chr4 (184-278)||(24969543-24969642)
chr4 (150-249)||(35360712-35360816)
chr4 (150-222)||(52824275-52824347)
chr4 (150-228)||(4895008-4895086)
chr4 (184-280)||(23928568-23928668)
chr4 (185-230)||(56552132-56552177)
chr4 (150-279)||(4688248-4688383)
chr4 (184-281)||(55049399-55049501)
chr4 (228-280)||(1298912-1298964)
chr4 (150-280)||(28809846-28809982)
chr4 (150-249)||(24294503-24294607)
chr4 (228-283)||(55107521-55107576)
chr4 (228-281)||(530788-530841)
chr4 (188-225)||(3422489-3422526)
chr4 (228-280)||(27434610-27434662)
chr4 (184-278)||(36030941-36031031)
chr4 (228-280)||(52824239-52824291)
chr4 (191-257)||(2272443-2272514)
chr4 (228-279)||(18417658-18417709)
chr4 (184-218)||(52587382-52587416)
chr4 (228-281)||(24969663-24969716)
chr4 (197-252)||(9355581-9355641)
chr4 (228-280)||(20435259-20435311)
[»] chr3 (58 HSPs)
chr3 (150-280)||(36657433-36657568)
chr3 (191-285)||(22176186-22176285)
chr3 (150-280)||(21969157-21969292)
chr3 (150-280)||(21991593-21991728)
chr3 (184-285)||(22101235-22101341)
chr3 (150-280)||(36822760-36822895)
chr3 (150-280)||(3970491-3970626)
chr3 (150-280)||(45487835-45487970)
chr3 (150-282)||(13078161-13078298)
chr3 (150-278)||(32237396-32237529)
chr3 (151-279)||(10017151-10017279)
chr3 (150-280)||(12789642-12789777)
chr3 (150-280)||(26906490-26906625)
chr3 (150-280)||(36278756-36278891)
chr3 (184-280)||(4072273-4072374)
chr3 (184-280)||(25446320-25446420)
chr3 (184-280)||(50099504-50099605)
chr3 (154-280)||(10441258-10441389)
chr3 (184-285)||(43639076-43639182)
chr3 (150-228)||(12838113-12838191)
chr3 (184-280)||(35368803-35368904)
chr3 (184-279)||(8831811-8831911)
chr3 (184-280)||(10117586-10117682)
chr3 (150-282)||(25488339-25488476)
chr3 (184-279)||(13723989-13724088)
chr3 (150-280)||(25561047-25561182)
chr3 (150-280)||(36329188-36329315)
chr3 (184-280)||(39850344-39850446)
chr3 (191-280)||(46679338-46679432)
chr3 (188-280)||(26977764-26977861)
chr3 (184-280)||(55340293-55340394)
chr3 (184-279)||(10254639-10254739)
chr3 (150-282)||(45712901-45713038)
chr3 (184-280)||(44611382-44611482)
chr3 (228-280)||(25488460-25488512)
chr3 (228-280)||(25561011-25561063)
chr3 (228-280)||(35368549-35368601)
chr3 (228-280)||(36657552-36657604)
chr3 (184-278)||(404115-404213)
chr3 (186-276)||(1476555-1476650)
chr3 (150-222)||(46664212-46664284)
chr3 (184-222)||(157031-157069)
chr3 (150-225)||(43150516-43150591)
chr3 (188-225)||(26976902-26976939)
chr3 (228-280)||(21969276-21969328)
chr3 (228-280)||(21991712-21991764)
chr3 (228-280)||(45487799-45487851)
chr3 (185-259)||(37536941-37537020)
chr3 (228-278)||(12838079-12838129)
chr3 (184-225)||(44920706-44920747)
chr3 (228-280)||(4072393-4072445)
chr3 (228-280)||(10441377-10441429)
chr3 (228-280)||(12789606-12789658)
chr3 (228-280)||(26906454-26906506)
chr3 (232-280)||(32237517-32237565)
chr3 (228-280)||(36278875-36278927)
chr3 (228-280)||(39850464-39850516)
chr3 (184-228)||(49984001-49984045)
[»] chr2 (33 HSPs)
chr2 (150-280)||(24101832-24101967)
chr2 (150-282)||(45408661-45408798)
chr2 (150-280)||(34490492-34490627)
chr2 (184-280)||(22269792-22269893)
chr2 (184-280)||(43476016-43476117)
chr2 (150-281)||(12850541-12850677)
chr2 (150-280)||(9933570-9933704)
chr2 (184-280)||(1923980-1924081)
chr2 (184-280)||(7737135-7737236)
chr2 (184-280)||(42713777-42713878)
chr2 (191-281)||(2818743-2818838)
chr2 (184-280)||(6605805-6605905)
chr2 (150-280)||(3116912-3117047)
chr2 (150-280)||(29229361-29229499)
chr2 (150-280)||(29342661-29342799)
chr2 (184-280)||(27920642-27920743)
chr2 (150-285)||(16705769-16705909)
chr2 (184-228)||(23835947-23835991)
chr2 (150-281)||(9281346-9281482)
chr2 (150-222)||(34455921-34455993)
chr2 (184-285)||(20892955-20893060)
chr2 (150-252)||(9850786-9850892)
chr2 (228-280)||(16705733-16705785)
chr2 (228-280)||(45408625-45408677)
chr2 (228-283)||(24101951-24102006)
chr2 (228-282)||(12850661-12850715)
chr2 (232-282)||(34455883-34455933)
chr2 (228-280)||(1924100-1924152)
chr2 (194-273)||(7116450-7116534)
chr2 (228-280)||(9281466-9281518)
chr2 (228-280)||(20892884-20892936)
chr2 (228-280)||(23835876-23835928)
chr2 (183-254)||(40362552-40362627)
[»] chr8 (23 HSPs)
chr8 (154-285)||(40891053-40891189)
chr8 (150-280)||(38629510-38629645)
chr8 (150-278)||(37114274-37114407)
chr8 (151-252)||(4262004-4262110)
chr8 (184-280)||(17426628-17426729)
chr8 (184-276)||(24741827-24741924)
chr8 (150-283)||(29780956-29781094)
chr8 (184-282)||(33100643-33100746)
chr8 (150-280)||(38520054-38520189)
chr8 (184-280)||(8210393-8210494)
chr8 (192-280)||(15882279-15882372)
chr8 (150-280)||(12234502-12234638)
chr8 (183-280)||(23940804-23940906)
chr8 (195-283)||(38515585-38515678)
chr8 (228-280)||(15882200-15882252)
chr8 (184-249)||(11828627-11828697)
chr8 (191-276)||(35467247-35467337)
chr8 (228-280)||(29781078-29781130)
chr8 (228-280)||(38520018-38520070)
chr8 (232-281)||(24211401-24211450)
chr8 (184-225)||(25264287-25264328)
chr8 (228-280)||(8210323-8210375)
chr8 (228-280)||(12234466-12234518)
[»] scaffold0122 (2 HSPs)
scaffold0122 (150-282)||(45870-46007)
scaffold0122 (228-280)||(45834-45886)
[»] scaffold0086 (1 HSPs)
scaffold0086 (150-279)||(48162-48296)
[»] scaffold0163 (2 HSPs)
scaffold0163 (184-280)||(1939-2040)
scaffold0163 (228-280)||(2059-2111)
[»] scaffold0188 (1 HSPs)
scaffold0188 (184-280)||(7156-7257)
[»] scaffold0653 (1 HSPs)
scaffold0653 (150-281)||(3392-3528)
[»] scaffold0107 (2 HSPs)
scaffold0107 (150-280)||(51099-51234)
scaffold0107 (228-280)||(51063-51115)
[»] scaffold0137 (1 HSPs)
scaffold0137 (184-280)||(10185-10286)
[»] scaffold0595 (1 HSPs)
scaffold0595 (206-280)||(5797-5878)
[»] scaffold0006 (1 HSPs)
scaffold0006 (228-281)||(72287-72340)
[»] scaffold0118 (1 HSPs)
scaffold0118 (184-279)||(14512-14612)
[»] scaffold0069 (1 HSPs)
scaffold0069 (228-280)||(26405-26457)


Alignment Details
Target: chr5 (Bit Score: 128; Significance: 4e-66; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 2268051 - 2268190
Alignment:
Q  1 atatagctaactacttggtgcatgggtatatatcacatgtaaggaactggtacaaaccgatcgatgtaacttcataatgctataagtatatgactgaact 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2268051 atatagctaactgcttggtgcatgggtatatatcacatgtaaggaactggtacaaaccgatcgatgtaacttcataatgctataagtatatgaatgaact 2268150  T
Q  101 tgactgttagttatatattttggagaaaaattaggtacaa 140  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  2268151 tgattgttagttatatattttggagaaaaattaggtacaa 2268190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 150 - 282
Target Start/End: Original strand, 16472991 - 16473128
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||||||||||||      |||||||||||||||||    
T  16472991 gtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaaccatac 16473090  T
Q  245 aaaaagcatataagggattatacctaagttttctccat 282  Q
     |||||||| ||||| ||| ||||||||||||||||||    
T  16473091 gaaaagcatctaaggaattgtacctaagttttctccat 16473128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 150 - 281
Target Start/End: Original strand, 15855879 - 15856015
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||||||||||||      |||||||||||||||||    
T  15855879 gtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaaccatac 15855978  T
Q  245 aaaaagcatataagggattatacctaagttttctcca 281  Q
     |||||||| ||||| ||| |||||||||||||||||    
T  15855979 gaaaagcatctaaggaattgtacctaagttttctcca 15856015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 35420747 - 35420612
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||||||||||||      |||||||||||||||||    
T  35420747 gtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaaccatac 35420648  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||| ||||| ||| ||||||||||||||||    
T  35420647 gaaaagcatctaaggaattgtacctaagttttctcc 35420612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 20476467 - 20476602
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||| ||||||||||||||||||||||||||||||||      |||||||||||||||||    
T  20476467 gtatggttcttaactaaaaatacatatttttgtgatataacaaattttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaaccatac 20476566  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||||||||||||||||    
T  20476567 gaaaagcacctaaggaattgtacctaagttttctcc 20476602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 33629446 - 33629345
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||||||| ||||||| ||     |||||||||||||||| ||||||| |||||| ||| ||||||||||||||    
T  33629446 atataacaaactttgagaaaattatggatttgagaaaatcatagtgaatttagttaagaaccataccaaaagcacataaggaattgtacctaagttttct 33629347  T
Q  279 cc 280  Q
    ||    
T  33629346 cc 33629345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 285
Target Start/End: Complemental strand, 13754426 - 13754286
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||  ||||||||||||||||||| |||||||||||| |||||     |||||||||| |||||    
T  13754426 gtatggttcttaactaaaaatacatatttttttgatatagcaaactttgagaaaattatgaatttgaggaaattatggtgaatttagttaagaatcatac 13754327  T
Q  245 aaaaagcatataagggattatacctaagttttctccatata 285  Q
     |||| || |||||| ||| |||||||||||||||| ||||    
T  13754326 gaaaaacacataaggaattgtacctaagttttctccttata 13754286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 1138595 - 1138730
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcat-----ggttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||| |||||||       |||||||||||||||||    
T  1138595 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcataatgaatttagttaagaaccatac 1138694  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  || || ||| ||||||||||||||||    
T  1138695 gaaaagcagctatggaattgtacctaagttttctcc 1138730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 228 - 285
Target Start/End: Original strand, 2268724 - 2268781
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctccatata 285  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  2268724 ttagttaagaaccatacaaaaagcatctaagaaattatacctaagttttctccatata 2268781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 21261979 - 21262085
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||| |||||||||||||||||||      |||||||||||||||||    
T  21261979 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattgtggatttgaggaaatcatgatgaatttagttaagaaccatac 21262078  T
Q  245 aaaaagc 251  Q
    |||||||    
T  21262079 aaaaagc 21262085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 24397346 - 24397278
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatg----gttagttaagaaccatacaaaa 248  Q
    |||||| ||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||    
T  24397346 atataacaaactttgagaaaattatggatttgaggaaatcatgtgaatttagttaagaaccatacaaaa 24397278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 285
Target Start/End: Complemental strand, 21259864 - 21259725
Alignment:
Q  151 tatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccataca 245  Q
    |||||||||||| ||||||||||||        |||||| |||||||||||||||||||  ||||||||||||||||     |||  ||||||||||||     
T  21259864 tatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatgattttgaggaaatcatggtgaatttaactaagaaccatacg 21259765  T
Q  246 aaaagcatataagggattatacctaagttttctccatata 285  Q
    ||||||| |||| | ||| ||| |||||||||||| ||||    
T  21259764 aaaagcacataaagaattgtacgtaagttttctccttata 21259725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 19976332 - 19976376
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggt 228  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  19976332 atatgataaactttgagaaaattatggatttgaggaaatcatggt 19976376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 21591300 - 21591212
Alignment:
Q  198 gagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcca 281  Q
    ||||||||||||||||||||||||||||||     |||||| | |||||||| |||||||  ||||| ||| |||||||||||||||||    
T  21591300 gagaaaattatggatttgaggaaatcatggtgaatttagttcacaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 21591212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 21595417 - 21595329
Alignment:
Q  198 gagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcca 281  Q
    ||||||||||||||||||||||||||||||     |||||| | |||||||| |||||||  ||||| ||| |||||||||||||||||    
T  21595417 gagaaaattatggatttgaggaaatcatggtgaatttagttcacaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 21595329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 37552408 - 37552308
Alignment:
Q  185 tataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctc 279  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||     ||||||||||||| |||||||||||   || | ||| |||||||||||||||    
T  37552408 tataacaaactttgagaaaattatgaatttgaggaagtcatggtgaatttagttaagaaccgtacaaaaagcacggaatgaattgtacctaagttttctc 37552309  T
Q  280 c 280  Q
    |    
T  37552308 c 37552308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 4266018 - 4266153
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        || ||| ||||||| |||||||||||||||||| ||||||| ||     |||||||||||||||||    
T  4266018 gtatggttcttaactaaaaatacatattttttggatgtaacaaactttaagaaaattatggatttgaagaaatcacggtgaatttagttaagaaccatac 4266117  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||| ||  ||||| ||| |||| |||||||||||    
T  4266118 gaaaaacacctaaggaattgtaccgaagttttctcc 4266153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 12744862 - 12744940
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt 228  Q
    |||||||| |||| ||||||||||||        |||||| ||||||||||||||||||| ||||||||||||||||||    
T  12744862 gtatggtttttaactaaaaatacatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggt 12744940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 2268818 - 2268858
Alignment:
Q  305 gaaaaacaaaaatgacacaactctctctttatagaataata 345  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  2268818 gaaaaacaaaaatgacacaactctctctttatataataata 2268858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 15855895 - 15855843
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||    
T  15855895 ttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 15855843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 35420731 - 35420783
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||    
T  35420731 ttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 35420783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 735313 - 735385
Alignment:
Q  151 tatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatc 223  Q
    |||| ||||||||||||||||||||       ||||||| ||||||||||||||||||| |||||| ||||||    
T  735313 tatgattcttaattaaaaatacatatttcttgaatataacaaactttgagaaaattatgaatttgatgaaatc 735385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 277
Target Start/End: Original strand, 12807947 - 12808079
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    |||||||| |||| ||||||||||||        |||||| ||||||||| |||||||||||||| ||||||||||||     ||||| ||||| |||||    
T  12807947 gtatggtttttaactaaaaatacatattttttagatataacaaactttgaaaaaattatggatttaaggaaatcatggtgaatttagtcaagaatcatac 12808046  T
Q  245 aaaaagcatataagggattatacctaagttttc 277  Q
     |||| ||  ||||| ||| |||||||||||||    
T  12808047 gaaaaacacttaaggaattgtacctaagttttc 12808079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 37655252 - 37655182
Alignment:
Q  185 tataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaag 250  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||     ||||||||||||| |||||||||    
T  37655252 tataacaaactttgagaaaattatgaatttgaggaagtcatggtgaatttagttaagaaccgtacaaaaag 37655182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 780895 - 780851
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggt 228  Q
    |||||| ||||||| |||||||||||||||| |||||||||||||    
T  780895 atataacaaactttaagaaaattatggatttaaggaaatcatggt 780851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 8364749 - 8364797
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagtttt 276  Q
    |||||||||||||||||||||||||  ||||| ||| ||||||||||||    
T  8364749 ttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 8364797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 16473007 - 16472959
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagtttt 276  Q
    ||||||||||||||||| |||||||| ||||| ||| ||||||||||||    
T  16473007 ttagttaagaaccatacgaaaagcatctaaggaattgtacctaagtttt 16472959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 35276393 - 35276349
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggt 228  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||    
T  35276393 atataataaactttaagaaaattatggatttgataaaatcatggt 35276349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 1456157 - 1456085
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaat 222  Q
    ||||||||||| | ||||||||||||        |||||| ||||||||||||||||||||||||||| ||||    
T  1456157 gtatggttcttgactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaat 1456085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 34513512 - 34513465
Alignment:
Q  191 aaactttgagaaaattatggatttgaggaaatcatggttagttaagaa 238  Q
    |||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  34513512 aaactttgagaaaattatgggtttgaagaaatcatgagtagttaagaa 34513465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 24397365 - 24397415
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||    
T  24397365 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 24397415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 1384421 - 1384388
Alignment:
Q  192 aactttgagaaaattatggatttgaggaaatcat 225  Q
    ||||||||||||||||| ||||||||||||||||    
T  1384421 aactttgagaaaattatagatttgaggaaatcat 1384388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 43539177 - 43539278
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||||||||| || |||||| |      ||||||||| ||||||| |||| ||  ||||| ||| ||||||| ||||||    
T  43539177 atataacaaactttgagaaaattatggatttaagaaaatcacgatgaatttagttaaggaccatacgaaaaacacctaaggaattgtacctaaattttct 43539276  T
Q  279 cc 280  Q
    ||    
T  43539277 cc 43539278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 10132373 - 10132421
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagtttt 276  Q
    |||||||||||||||||||||| || |||||| ||| || |||||||||    
T  10132373 ttagttaagaaccatacaaaaaacacataaggaattgtatctaagtttt 10132421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 20476483 - 20476431
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||| ||  | ||| ||||||||||||||||    
T  20476483 ttagttaagaaccatacgaaaagcatctagagaattgtacctaagttttctcc 20476431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 150 - 281
Target Start/End: Complemental strand, 45997643 - 45997507
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||    
T  45997643 gtatggttcttaactaaaaatacatattttttggatataataaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatac 45997544  T
Q  245 aaaaagcatataagggattatacctaagttttctcca 281  Q
    |||||||| ||| |  ||| |||||||||||||||||    
T  45997543 aaaaagcacatatgaaattgtacctaagttttctcca 45997507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 150 - 282
Target Start/End: Original strand, 38883257 - 38883394
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||||||||||||      |||||||||||||||||    
T  38883257 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaaccatac 38883356  T
Q  245 aaaaagcatataagggattatacctaagttttctccat 282  Q
     |||||||| ||||| ||| ||||||||||||||||||    
T  38883357 gaaaagcatctaaggaattgtacctaagttttctccat 38883394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 31231715 - 31231613
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||  ||||| ||| ||||||||||||||    
T  31231715 atataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 31231616  T
Q  279 cca 281  Q
    |||    
T  31231615 cca 31231613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 150 - 281
Target Start/End: Original strand, 24836056 - 24836192
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    |||||||||| || ||||||||||||        |||||| |||||||||||||||||||||||||||||||||||||     |||||||||||||||||    
T  24836056 gtatggttctnaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatac 24836155  T
Q  245 aaaaagcatataagggattatacctaagttttctcca 281  Q
     |||||||  ||||| ||| |||||||||||||||||    
T  24836156 gaaaagcacctaaggaattgtacctaagttttctcca 24836192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 184 - 283
Target Start/End: Complemental strand, 20184339 - 20184235
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||||||||||||||||||||||     ||||||||||| ||||| |||||||  ||||| ||| ||||||||||||||    
T  20184339 atataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttct 20184240  T
Q  279 ccata 283  Q
    |||||    
T  20184239 ccata 20184235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 3953177 - 3953042
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||| ||||||||||||||||||||||||||||     |||||||| ||||||||    
T  3953177 gtatggttcttaactaaaaatacatattttttggatataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaaaaaccatac 3953078  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     ||||| | |||||| ||| ||||||||||||||||    
T  3953077 gaaaagtacataaggaattgtacctaagttttctcc 3953042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 277
Target Start/End: Original strand, 30594763 - 30594861
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttc 277  Q
    |||||| |||||||||||||||||||||||||||||||||||||     ||||||||||||||||| |||||||| ||||| ||| |||||||| ||||    
T  30594763 atataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcatctaaggaattgtacctaagctttc 30594861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 34052315 - 34052450
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||| |||||||||||||||||     |||| ||||||||||||    
T  34052315 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagctaagaaccatac 34052414  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||||||||||||||||    
T  34052415 gaaaagcacctaaggaattgtacctaagttttctcc 34052450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 35339413 - 35339278
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||||||| |||||||||      |||||||||||||||||    
T  35339413 gtatggttcttaaataaaaatacatattttttggatataacaaactttgagaaaattatggatttgaagaaatcatgatgaatttagttaagaaccatac 35339314  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||||||||||||||||    
T  35339313 gaaaagcacctaaggaattgtacctaagttttctcc 35339278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 24123856 - 24123754
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||||||||||||||| |     ||||||| ||||||||||||||| | |||||| ||| ||||||| ||||||    
T  24123856 atataacaaactttgagaaaattatggatttgaggaaatcatagtatttttagttaggaaccatacaaaaagtacataaggaattgtacctaaattttct 24123757  T
Q  279 cca 281  Q
    |||    
T  24123756 cca 24123754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 150 - 276
Target Start/End: Complemental strand, 30259201 - 30259070
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||| |||||||||     ||||||||||||||||     
T  30259201 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccatag 30259102  T
Q  245 aaaaagcatataagggattatacctaagtttt 276  Q
     |||||||  ||||| ||| ||||||||||||    
T  30259101 gaaaagcacctaaggaattgtacctaagtttt 30259070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 185 - 276
Target Start/End: Original strand, 10398390 - 10398486
Alignment:
Q  185 tataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagtttt 276  Q
    ||||| |||||||||||| |||||| |||||||||||||||||     |||||||||||||||||||||||||||||||| | |  |||||||||||    
T  10398390 tataacaaactttgagaagattatgtatttgaggaaatcatggataatttagttaagaaccatacaaaaagcatataaggaaatgcacctaagtttt 10398486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 150 - 284
Target Start/End: Complemental strand, 10936605 - 10936466
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||         ||||| |||||||||||||||||| ||||||||||| ||||||     ||||||||||||| |||    
T  10936605 gtatggttcttaactaaaaatacatattttttggttataacaaactttgagaaaattatagatttgaggaagtcatggtgaatttagttaagaaccgtac 10936506  T
Q  245 aaaaagcatataagggattatacctaagttttctccatat 284  Q
     |||||||  ||||| ||| ||| ||||||||||||||||    
T  10936505 gaaaagcacctaaggaattgtacataagttttctccatat 10936466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 39617942 - 39617841
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||| |||||||||||||     ||||||||||||||||| || | ||| ||||  ||| ||||||||||||||    
T  39617942 atataacaaactttgagaaaattatggattggaggaaatcatggtgaatttagttaagaaccatacgaagaacatctaagaaattgtacctaagttttct 39617843  T
Q  279 cc 280  Q
    ||    
T  39617842 cc 39617841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 47237526 - 47237433
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||| ||||||||||||||||||||||| |||||||| ||  ||||||||||||||||  |||||||  | ||| ||||||||||||||||||||    
T  47237526 atataacaaactttgagaaaattatggattcgaggaaataat--ttagttaagaaccataggaaaagcacct-aggaattatacctaagttttctcc 47237433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 281
Target Start/End: Complemental strand, 9285849 - 9285713
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||| ||||||||  ||||||||||||||||||     || |||||||||||||    
T  9285849 gtatggttcttaaataaaaatacatattttttggatataacaaactttgataaaattataaatttgaggaaatcatggtgaatttaattaagaaccatac 9285750  T
Q  245 aaaaagcatataagggattatacctaagttttctcca 281  Q
    ||||||||   || | ||| |||||||||||||||||    
T  9285749 aaaaagcaccaaatgaattgtacctaagttttctcca 9285713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 281
Target Start/End: Complemental strand, 9289916 - 9289780
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||| ||||||||  ||||||||||||||||||     || |||||||||||||    
T  9289916 gtatggttcttaaataaaaatacatattttttggatataacaaactttgataaaattataaatttgaggaaatcatggtgaatttaattaagaaccatac 9289817  T
Q  245 aaaaagcatataagggattatacctaagttttctcca 281  Q
    ||||||||   || | ||| |||||||||||||||||    
T  9289816 aaaaagcaccaaatgaattgtacctaagttttctcca 9289780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 276
Target Start/End: Original strand, 33749714 - 33749810
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatacaaaaagcatataagggattatacctaagtttt 276  Q
    |||||||||||||||||||||||||| |||| |||||||||||      ||||||||||||||||||||||  || |||| | |||||||||||||||    
T  33749714 atataataaactttgagaaaattatgaatttaaggaaatcatgatgaatttagttaagaaccatacaaaaaatatttaagag-ttatacctaagtttt 33749810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 279
Target Start/End: Complemental strand, 39143813 - 39143713
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||     ||||| ||||||||||| ||||||||  || | ||| ||||||||||||||    
T  39143813 atataacaaactttgagaatattatggatttgaggaaattatggtgaatttagtcaagaaccatacgaaaagcatccaatgaattgtacctaagttttct 39143714  T
Q  279 c 279  Q
    |    
T  39143713 c 39143713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 48103404 - 48103508
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg--gttagttaagaaccatacaaa 247  Q
    ||||| ||||||| ||||||||||||        |||||| |||||||||||  ||||||||||||||||||||| |   ||||||||||||||||||||    
T  48103404 gtatgattcttaactaaaaatacatattttttggatataacaaactttgagattattatggatttgaggaaatcacgaatttagttaagaaccatacaaa 48103503  T
Q  248 aagca 252  Q
    |||||    
T  48103504 aagca 48103508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 31521626 - 31521547
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataag 258  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||     ||||||||||||||||| |||||||| ||||    
T  31521626 atataataaactttgaaaaaattatgaatttgagaaaatcatggtaaatttagttaagaaccatacgaaaagcatctaag 31521547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 12142263 - 12142364
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| || |||||||||||||||||||||||| |||||||||     |||||||||||| |||| |||| || |||||| ||| |||| || ||||||    
T  12142263 atataacaatctttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaactatacgaaaaacacataaggaattgtacccaaattttct 12142362  T
Q  279 cc 280  Q
    ||    
T  12142363 cc 12142364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 40358151 - 40358229
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt 228  Q
    ||||||||||||| ||||||| ||||        |||||| ||||||||||||||||||| ||||||||||||||||||    
T  40358151 gtatggttcttaactaaaaatgcatatttttttgatataacaaactttgagaaaattatgaatttgaggaaatcatggt 40358229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 25742566 - 25742435
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg--gttagttaagaaccatacaaa 247  Q
    |||||||| |||| ||||||||||||        |||||| |||||||||||||||||||||||||||||||| |||   ||||||||||||||||  ||    
T  25742566 gtatggttgttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaat-atgaatttagttaagaaccataggaa 25742468  T
Q  248 aagcatataagggattatacctaagttttctcc 280  Q
    || ||  ||||  ||| ||| ||||||||||||    
T  25742467 aaacacctaagaaattgtacataagttttctcc 25742435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 38883273 - 38883221
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||    
T  38883273 ttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 38883221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 37093804 - 37093882
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt 228  Q
    ||||| |||||||||||||||| |||        |||||| ||||||||||||||||||  ||||||||||||||||||    
T  37093804 gtatgattcttaattaaaaatatatattttttggatataacaaactttgagaaaattataaatttgaggaaatcatggt 37093882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 10936589 - 10936641
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  10936589 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 10936641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 30259185 - 30259237
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||||||||||||||||||||||   |||| ||| ||||||||||||||||    
T  30259185 ttagttaagaaccatacaaaaagcacccaaggaattgtacctaagttttctcc 30259237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 31231735 - 31231787
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  31231735 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 31231787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 33721879 - 33721827
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  33721879 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 33721827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 38528442 - 38528394
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagtttt 276  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||| ||||    
T  38528442 ttagttaagaaccatacaaaaagcatttaaggaattgtacctaactttt 38528394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 38528511 - 38528467
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggt 228  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||    
T  38528511 atataacaaactttgagaaaattatggattcgaggaattcatggt 38528467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 38528531 - 38528583
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  38528531 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 38528583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 1402990 - 1403032
Alignment:
Q  185 tataataaactttgagaaaattatggatttgaggaaatcatgg 227  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||    
T  1402990 tataacaaattttgagaaaattatagatttgaggaaatcatgg 1403032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 12142244 - 12142190
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctccat 282  Q
    |||||||||||||||||  ||||||  ||||| ||| ||||||||||||||||||    
T  12142244 ttagttaagaaccatacccaaagcacgtaaggaattgtacctaagttttctccat 12142190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 25572883 - 25572925
Alignment:
Q  185 tataataaactttgagaaaattatggatttgaggaaatcatgg 227  Q
    ||||| |||||||||||||||||||| ||||| ||||||||||    
T  25572883 tataacaaactttgagaaaattatggttttgaagaaatcatgg 25572925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 29277890 - 29277837
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcca 281  Q
    ||||||||||||||||||||||| |  ||| | ||| |||||||||||||||||    
T  29277890 ttagttaagaaccatacaaaaagtacctaaagaattgtacctaagttttctcca 29277837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 34052331 - 34052278
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcca 281  Q
    ||||||||||||||||| |||||||  ||||| | | |||||||||||||||||    
T  34052331 ttagttaagaaccatacgaaaagcacctaaggaaatgtacctaagttttctcca 34052278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 44148724 - 44148757
Alignment:
Q  191 aaactttgagaaaattatggatttgaggaaatca 224  Q
    |||||||||||||||||||||||| |||||||||    
T  44148724 aaactttgagaaaattatggatttaaggaaatca 44148757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 7955033 - 7954985
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagtttt 276  Q
    ||||||||||||||||||||||||| |||||| | || || ||||||||    
T  7955033 ttagttaagaaccatacaaaaagcacataaggaaataaacataagtttt 7954985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 20184358 - 20184410
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||| ||||| |||||||  ||||| ||| ||||||||||||||||    
T  20184358 ttagttaagaatcatacgaaaagcagctaaggaattgtacctaagttttctcc 20184410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 35665685 - 35665633
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||  ||| ||||||||||||||||    
T  35665685 ttagttaagaaccatacgaaaagcacctaagcaattgtacctaagttttctcc 35665633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 150 - 284
Target Start/End: Complemental strand, 14387150 - 14387011
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||    
T  14387150 gtatggttcttaactaaaaatacatattttttggatataataaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatac 14387051  T
Q  245 aaaaagcatataagggattatacctaagttttctccatat 284  Q
     ||| |||| ||||| ||| |||||||||||||| |||||    
T  14387050 gaaatgcatctaaggaattgtacctaagttttcttcatat 14387011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 50627167 - 50627302
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||||||||||||||||| |     ||||||||||||||||    
T  50627167 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaaccatac 50627266  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||||||||| ||| ||||||||||||||||    
T  50627267 gaaaagcatataaggaattgtacctaagttttctcc 50627302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 19955046 - 19954911
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||||||||||||||||||     |||||||||||| ||||    
T  19955046 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaactatac 19954947  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     ||||||| |||||| ||| ||||||||||||||||    
T  19954946 gaaaagcacataaggaattgtacctaagttttctcc 19954911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 191 - 280
Target Start/End: Original strand, 36880588 - 36880682
Alignment:
Q  191 aaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||||||||||||||||||||||||||||||||||     ||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||    
T  36880588 aaactttgagaaaattatggatttgaggaaatcatggtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 36880682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 279
Target Start/End: Original strand, 1387814 - 1387948
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||||||||||||||||||||||| |||||||||||||||||     |||||||||||||||||    
T  1387814 gtatggttcttaactaaaaatacatattttttggatataataaactttgagaaaattatgaatttgaggaaatcatggtatctttagttaagaaccatac 1387913  T
Q  245 aaaaagcatataagggattatacctaagttttctc 279  Q
     |||||||  ||||| ||| ||||||| |||||||    
T  1387914 gaaaagcacctaaggaattgtacctaaattttctc 1387948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 150 - 278
Target Start/End: Original strand, 5189505 - 5189638
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||||| ||||||||||||     |||||||||||||||||    
T  5189505 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatac 5189604  T
Q  245 aaaaagcatataagggattatacctaagttttct 278  Q
     |||||||| ||||| ||| ||||||| ||||||    
T  5189605 gaaaagcatctaaggaattgtacctaaattttct 5189638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 27241059 - 27240924
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| |||||||| |||        |||||| ||||||||||||||||||||||||||| |||||||||     |||||||||||||||||    
T  27241059 gtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccatac 27240960  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||||||||||||||||    
T  27240959 gaaaagcacctaaggaattgtacctaagttttctcc 27240924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 150 - 279
Target Start/End: Complemental strand, 3607864 - 3607730
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||||||||||||      |||||||||||||||||    
T  3607864 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaaccatac 3607765  T
Q  245 aaaaagcatataagggattatacctaagttttctc 279  Q
    ||||||||  ||||  ||| ||||||| |||||||    
T  3607764 aaaaagcacctaagaaattctacctaaattttctc 3607730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 283
Target Start/End: Complemental strand, 27926351 - 27926248
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||| ||||||||||  ||     |||||||||||||||| ||||||| |||||| ||||||||||||||||||    
T  27926351 atataacaaactttgagaaaattatggatt-gaggaaatcacagtgaatttagttaagaaccatacgaaaagcacataaggaattatacctaagttttct 27926253  T
Q  279 ccata 283  Q
    |||||    
T  27926252 ccata 27926248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 184 - 282
Target Start/End: Complemental strand, 9978152 - 9978049
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||||||||||||||| |     ||||||||||| ||||| ||||||| |||||| ||| ||||||| ||||||    
T  9978152 atataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaagaatcatacgaaaagcacataaggaattgtacctaaattttct 9978053  T
Q  279 ccat 282  Q
    ||||    
T  9978052 ccat 9978049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 2854667 - 2854532
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| |||||||| |||        |||||| ||||||||||||||||||| ||||||||||||||| |     |||||||||||||||||    
T  2854667 gtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaaccatac 2854568  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     ||||| || ||||| ||| ||||||||||||||||    
T  2854567 gaaaagtatctaaggaattgtacctaagttttctcc 2854532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 23698637 - 23698502
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| |||||||| |||        |||||| ||||||||||||||||||| ||||||||||||||| |     |||||||||||||||||    
T  23698637 gtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaaccatac 23698538  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     ||||| || ||||| ||| ||||||||||||||||    
T  23698537 gaaaagtatctaaggaattgtacctaagttttctcc 23698502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 279
Target Start/End: Complemental strand, 19797116 - 19796982
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||| |||||||||||||||||||||||||||     |||||||| ||||||||    
T  19797116 gtatggttcttaactaaaaatacatattttttggatataacaaactttgaaaaaattatggatttgaggaaatcatggtatttttagttaaaaaccatac 19797017  T
Q  245 aaaaagcatataagggattatacctaagttttctc 279  Q
     |||||||  ||||  ||| |||||||||||||||    
T  19797016 gaaaagcacctaagaaattgtacctaagttttctc 19796982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 40647188 - 40647289
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||||||||||||||||||||||     |||||||| || ||||| |||||||  ||||| ||| ||||||||||||||    
T  40647188 atataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaaaatcatacgaaaagcacctaaggaattgtacctaagttttct 40647287  T
Q  279 cc 280  Q
    ||    
T  40647288 cc 40647289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 47940671 - 47940570
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||| |||||||||||||     ||||||||||||||||| |||||||  ||||  ||| ||||||||||||||    
T  47940671 atataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttct 47940572  T
Q  279 cc 280  Q
    ||    
T  47940571 cc 47940570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 15324697 - 15324796
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||||||||||||||| |     ||||||||||||||||| ||||||| |||||| ||| ||| ||| ||||||    
T  15324697 atataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaagaaccatacgaaaagcacataaggaattgtacataaattttct 15324796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 42561430 - 42561295
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||| ||| ||||||||||     |||||||||||||||||    
T  42561430 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatatgaagaaatcatggtgaatttagttaagaaccatac 42561331  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||| |||| |||||||    
T  42561330 gaaaagcacctaaggaattgtacttaagatttctcc 42561295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 26208495 - 26208596
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||||||||||| ||||| ||||     |||||| |||||||||| |||||||  ||||| ||||||| ||||||||||    
T  26208495 atataacaaactttgagaaaattatggatttgaagaaattatggtgaatttagttcagaaccatacgaaaagcacctaaggaattatacataagttttct 26208594  T
Q  279 cc 280  Q
    ||    
T  26208595 cc 26208596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 51276796 - 51276695
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcat-----ggttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    ||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||| |||||||  || |  ||||||||||| ||||||    
T  51276796 atataataaactttgagaaaattatggatttgaggaaatcataatgaatttagttaagaaccatacgaaaagcacctatgaaattatacctaaattttct 51276697  T
Q  279 cc 280  Q
    ||    
T  51276696 cc 51276695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 6079454 - 6079526
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagc 251  Q
    |||||| |||||||||||||||||||||||||||||||||||||     ||||||||||||||||| ||||||    
T  6079454 atataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagc 6079526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 281
Target Start/End: Original strand, 27670179 - 27670316
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatac 244  Q
    ||||| ||||||| ||||||||||||       ||||||| |||||||||||||||||||||||| |||||||||||      |||||||| ||||||||    
T  27670179 gtatgattcttaactaaaaatacatattttttgaatataaaaaactttgagaaaattatggatttaaggaaatcatgatgaatttagttaaaaaccatac 27670278  T
Q  245 aaaaagcatataagggattat-acctaagttttctcca 281  Q
     ||||||| |||||| ||| |  |||||||||||||||    
T  27670279 gaaaagcacataaggaattgtgccctaagttttctcca 27670316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 48954349 - 48954214
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| |||||||| |||        |||||| ||||||||||||||||||| ||||||||||||||| |     ||||||||||||||||     
T  48954349 gtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaaccatat 48954250  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     ||||| |  ||||| ||| ||||||||||||||||    
T  48954249 gaaaagtacctaaggaattgtacctaagttttctcc 48954214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 9895289 - 9895367
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt 228  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||| ||||||||||||||||||    
T  9895289 gtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatgtatttgaggaaatcatggt 9895367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 27928398 - 27928302
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatacaaaaagcatataagggattatacctaagtttt 276  Q
    |||||| ||||||||||||||||||||||| ||||||||||  ||     |||||||||||||||||||||||| |||||| ||| || |||||||||    
T  27928398 atataacaaactttgagaaaattatggatt-gaggaaatcacagtgaatttagttaagaaccatacaaaaagcacataaggaattgtatctaagtttt 27928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 51789698 - 51789597
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| | ||||||||||||||||||| |||||||||||||||     |||||||| |||||||| |||| ||  ||||| ||| ||||||||||||||    
T  51789698 atataacatactttgagaaaattatggaattgaggaaatcatggtgaatttagttaaaaaccatacgaaaatcacctaaggaattgtacctaagttttct 51789599  T
Q  279 cc 280  Q
    ||    
T  51789598 cc 51789597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 39015286 - 39015243
Alignment:
Q  192 aactttgagaaaattatggatttgaggaaatcatggttagttaa 235  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  39015286 aactttgagaaaattatggatttgaagaaatcatggttagttaa 39015243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 48645145 - 48645073
Alignment:
Q  154 ggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg 226  Q
    ||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||||||||||||    
T  48645145 ggttcttaactaaaaatacatattttttagatataacaaactttgagaaaattatggatttgaggaaatcatg 48645073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 49284395 - 49284298
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagtttt 276  Q
    |||||| ||||||||| |||||||||||||| || |||||||||     |||||||||||||||||||||| ||  ||||  ||| ||||||||||||    
T  49284395 atataacaaactttgaaaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacaaaaaacaactaagaaattgtacctaagtttt 49284298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 957659 - 957703
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggt 228  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||    
T  957659 atataacaaactttgagaaaattatggatttgagaaaatcatggt 957703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 4299493 - 4299449
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggt 228  Q
    |||||| |||||||||||||||||||||||||||||||| |||||    
T  4299493 atataacaaactttgagaaaattatggatttgaggaaataatggt 4299449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 276
Target Start/End: Original strand, 28244028 - 28244119
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggttagttaagaaccatacaaaaagcatataagggattatacctaagtttt 276  Q
    |||||| |||||||||||||||||||||||| ||||||| |   |||||||||||  ||||||||| ||||||||  ||| |||| |||||||    
T  28244028 atataacaaactttgagaaaattatggatttaaggaaatga-atttagttaagaattatacaaaaaacatataagaaattgtaccgaagtttt 28244119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 36007920 - 36007872
Alignment:
Q  185 tataataaactttgagaaaattatggatttgaggaaatcatggttagtt 233  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| |||||    
T  36007920 tataacaaactttgagaaaattatgtatttgaggaaatcatggatagtt 36007872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 42561414 - 42561466
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||||||||||||||||||||||  ||||| ||| ||||||||||||||||    
T  42561414 ttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 42561466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 50627183 - 50627131
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||    
T  50627183 ttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 50627131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 51789714 - 51789766
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||    
T  51789714 ttagttaagaaccatacgaaaagcatttaaggaattgtacctaagttttctcc 51789766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 29598392 - 29598434
Alignment:
Q  183 aatataataaactttgagaaaattatggatttgaggaaatcat 225  Q
    ||||||| |||||||||||||||||||||||| ||||||||||    
T  29598392 aatataacaaactttgagaaaattatggatttaaggaaatcat 29598434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 50162658 - 50162708
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||||||||||||||||||||||  ||||| ||| ||||||||||||||    
T  50162658 ttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 50162708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 285
Target Start/End: Original strand, 23698621 - 23698678
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctccatata 285  Q
    ||||||||||||||||| ||||| |  ||||| ||| |||||||||||||||||||||    
T  23698621 ttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctccatata 23698678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 285
Target Start/End: Original strand, 25297966 - 25298023
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctccatata 285  Q
    ||||||||||||||||| |||| ||  ||||| ||| |||||||||||||||||||||    
T  25297966 ttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctccatata 25298023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 50162639 - 50162538
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||| |||||||| |||||| ||     ||| |||| |||||||||||||  |  ||||| ||| ||||||||||||||    
T  50162639 atataacaaactttgagaaaattatagatttgagaaaatcacggtgaatttaattaaaaaccatacaaaaaatacctaaggaattgtacctaagttttct 50162540  T
Q  279 cc 280  Q
    ||    
T  50162539 cc 50162538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 2302481 - 2302517
Alignment:
Q  192 aactttgagaaaattatggatttgaggaaatcatggt 228  Q
    |||||||||||||||||| ||||||||||||||||||    
T  2302481 aactttgagaaaattatgaatttgaggaaatcatggt 2302517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 5189521 - 5189469
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  5189521 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 5189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 19797100 - 19797152
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  19797100 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 19797152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 19955030 - 19955082
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||||||||| |  ||||| ||| ||||||||||||||||    
T  19955030 ttagttaagaaccatacaaaaagtacctaaggaattgtacctaagttttctcc 19955082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 49285094 - 49285146
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  49285094 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 49285146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 281
Target Start/End: Complemental strand, 2125205 - 2125069
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    |||| |||||||| ||||||||||||        |||||| ||||||||||||||||||  |||| |  |||||||||     |||||||||||||||||    
T  2125205 gtatagttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattataaatttaaaaaaatcatggtgaatttagttaagaaccatac 2125106  T
Q  245 aaaaagcatataagggattatacctaagttttctcca 281  Q
     ||||||| |||||  ||| || |||| |||||||||    
T  2125105 gaaaagcacataagaaattgtaactaaattttctcca 2125069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 9978171 - 9978222
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctc 279  Q
    ||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  9978171 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 9978222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 27926371 - 27926425
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctccat 282  Q
    ||||||||||||||||| |||||||  ||||| ||| ||| ||||||||||||||    
T  27926371 ttagttaagaaccatacgaaaagcacctaaggaattgtacataagttttctccat 27926425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 50856422 - 50856320
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||| ||||||||||||||||| |||||||||| ||||     |||| |||||| ||||| |||||||  ||| | ||| |||||||||||| |    
T  50856422 atataacaaattttgagaaaattatggacttgaggaaataatggtgaatttagctaagaatcatacgaaaagcacctaaagaattttacctaagttttat 50856323  T
Q  279 cca 281  Q
    |||    
T  50856322 cca 50856320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 285
Target Start/End: Original strand, 3607848 - 3607905
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctccatata 285  Q
    ||||||||||||||||| |||||||  ||||  ||| |||||||||||||||| ||||    
T  3607848 ttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctccttata 3607905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 2854651 - 2854703
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| ||||| |  ||||| ||| ||||||||||||||||    
T  2854651 ttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcc 2854703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 4299514 - 4299566
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||| ||  ||||| ||| ||||||||||||||||    
T  4299514 ttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcc 4299566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 15324678 - 15324626
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||  ||| ||||||||||||||||    
T  15324678 ttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 15324626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 18651350 - 18651310
Alignment:
Q  185 tataataaactttgagaaaattatggatttgaggaaatcat 225  Q
    ||||| ||| ||||||||||||||||||||| |||||||||    
T  18651350 tataacaaattttgagaaaattatggatttggggaaatcat 18651310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 22339076 - 22339036
Alignment:
Q  193 actttgagaaaattatggatttgaggaaatcatggttagtt 233  Q
    ||||||||||||| |||||||||| ||||||||||| ||||    
T  22339076 actttgagaaaatgatggatttgatgaaatcatggtgagtt 22339036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 29598456 - 29598508
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||||||||| |  ||| | ||| ||||||||||||||||    
T  29598456 ttagttaagaaccatacaaaaagtacctaacgaattgtacctaagttttctcc 29598508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 47940690 - 47940742
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||| ||  ||||| ||| ||||||||||||||||    
T  47940690 ttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcc 47940742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 48954333 - 48954385
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| ||||| |  ||||| ||| ||||||||||||||||    
T  48954333 ttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcc 48954385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 4e-29; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 14393634 - 14393735
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  14393634 atataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacaaaaagcacctaaggaattatacctaagttttct 14393733  T
Q  279 cc 280  Q
    ||    
T  14393734 cc 14393735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 11687278 - 11687143
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||||||||||||      |||||||||||||||||    
T  11687278 gtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaaccatac 11687179  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||| ||||| ||| ||||||||||||||||    
T  11687178 gaaaagcatctaaggaattgtacctaagttttctcc 11687143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 15546668 - 15546803
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||||||||||||||     || |||||||||||||    
T  15546668 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttaattaagaaccatac 15546767  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||||||||||||||||    
T  15546768 gaaaagcacctaaggaattgtacctaagttttctcc 15546803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 21380076 - 21379941
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||| |||||||||||||| ||||||||||||||||||     ||||||||||||||||    
T  21380076 gtatggttcttaactaaaaatacatattttttggatataacaaacattgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaaccatac 21379977  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||||||||||||||||    
T  21379976 gaaaagcacctaaggaattgtacctaagttttctcc 21379941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 279
Target Start/End: Original strand, 7808679 - 7808779
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||| ||||||||||||||||||     ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||    
T  7808679 atataacaaactttgagaaaattatagatttgaggaaatcatggtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 7808778  T
Q  279 c 279  Q
    |    
T  7808779 c 7808779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 8091098 - 8091233
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||||| ||||||||| ||     |||||||||||||||||    
T  8091098 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcacggtgaatttagttaagaaccatac 8091197  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||  ||| ||||||||||||||||    
T  8091198 gaaaagcacctaagcaattgtacctaagttttctcc 8091233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 282
Target Start/End: Complemental strand, 17367158 - 17367062
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggttagttaagaaccatacaaaaagcatataagggattatacctaagttttctccat 282  Q
    |||||| ||||||||||||||||||| |||||| ||||||||   |||||||||| ||||| ||||| | |||||| ||| ||||||||||||||||||    
T  17367158 atataacaaactttgagaaaattatgaatttgatgaaatcatc--tagttaagaatcatacgaaaagaacataaggaattgtacctaagttttctccat 17367062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 885421 - 885556
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||| ||||||||      ||||||||||| ||||     
T  885421 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatgatgaatttagttaagaatcatag 885520  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||||||||||||||||    
T  885521 gaaaagcacctaaggaattgtacctaagttttctcc 885556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 3369021 - 3369099
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt 228  Q
    ||||||||||||| ||||||||||||       ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  3369021 gtatggttcttaactaaaaatacatattttttgaatataacaaactttgagaaaattatgaatttgaggaaatcatggt 3369099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 4890581 - 4890480
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||| |||||||||||||||||     ||||||||||||||||| |||| ||  ||||  ||| ||||||||||||||    
T  4890581 atataacaaactttgagaaaattatgaatttgaggaaatcatggtaaatttagttaagaaccatacgaaaaacacctaagaaattgtacctaagttttct 4890482  T
Q  279 cc 280  Q
    ||    
T  4890481 cc 4890480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 4238924 - 4239020
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatacaaaaagcatataagggattatacctaagttt 275  Q
    |||||| ||||||||||||||||| ||||||||| ||||||||||     || ||||||||||||||||||||| | |||| ||| |||||||||||    
T  4238924 atataacaaactttgagaaaattaaggatttgagaaaatcatggtgaatttaattaagaaccatacaaaaagcacagaaggaattgtacctaagttt 4239020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 13172708 - 13172574
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcat----ggttagttaagaaccataca 245  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||||||||||||| ||      |||||||||||||||||     
T  13172708 gtatggttcttaagtaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatgatatgaatttagttaagaaccatacg 13172609  T
Q  246 aaaagcatataagggattatacctaagttttctcc 280  Q
    |||| ||| ||  | ||| ||||||||||||||||    
T  13172608 aaaaacatctagagaattgtacctaagttttctcc 13172574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 13439766 - 13439836
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaa 249  Q
    |||||| |||||||||||||||||||||||||||||||||||||     ||||||||||||||||| ||||    
T  13439766 atataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 13439836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 20501742 - 20501849
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||| ||||||||||||||||||| ||||||||||     |||||||||||||||||    
T  20501742 gtatggttcttaactaaaaatacatattttttggatataacaaacttcgagaaaattatggatttgaagaaatcatggtatttttagttaagaaccatac 20501841  T
Q  245 aaaaagca 252  Q
     |||||||    
T  20501842 gaaaagca 20501849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 150 - 282
Target Start/End: Complemental strand, 18998252 - 18998115
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnna-atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccata 243  Q
    ||||||||||||||||||||||||||         |||||| ||||||||||||||||||||||| |||||||||||||     ||||||||||| | ||    
T  18998252 gtatggttcttaattaaaaatacatattttttttgatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaa-cgta 18998154  T
Q  244 caaaaagcatataagggattatacctaagttttctccat 282  Q
    | |||| ||  ||||| ||| ||||||||||||||||||    
T  18998153 cgaaaaacacctaaggaattgtacctaagttttctccat 18998115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 276
Target Start/End: Original strand, 29609073 - 29609168
Alignment:
Q  186 ataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagtttt 276  Q
    |||| |||||||||||||||||||||||| ||||||||| ||     |||||||| |||||||| |||||||| ||||| ||| ||| ||||||||    
T  29609073 ataacaaactttgagaaaattatggatttaaggaaatcacggtgaatttagttaaaaaccatacgaaaagcatctaaggaattgtacgtaagtttt 29609168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 11687262 - 11687315
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcca 281  Q
    ||||||||||||||||| |||||||| ||||| ||| |||||||||||||||||    
T  11687262 ttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcca 11687315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 885437 - 885385
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||||||||||||||||||||||  ||||| ||| ||||||||||||||||    
T  885437 ttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 885385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 7187633 - 7187710
Alignment:
Q  185 tataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataa 257  Q
    |||||||||||||||||||| |||| ||||||| |||||||||     |||||||| ||| |||||||||||| ||||    
T  7187633 tataataaactttgagaaaaatatgaatttgagtaaatcatggtttatttagttaataactatacaaaaagcacataa 7187710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 6433742 - 6433690
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||  ||||||||||||||||||||    
T  6433742 ttagttaagaaccatacgaaaagcacctaagaaattatacctaagttttctcc 6433690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 15546684 - 15546632
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||||||||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  15546684 ttagttaagaaccatacaaaaaacaactaaggaattgtacctaagttttctcc 15546632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 21380060 - 21380112
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  21380060 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 21380112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 31764419 - 31764356
Alignment:
Q  191 aaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaa 249  Q
    ||||||||||||||||||| ||||||| |||| ||||     ||||||||||||||||||||||    
T  31764419 aaactttgagaaaattatgaatttgagaaaataatggtgaatttagttaagaaccatacaaaaa 31764356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 285
Target Start/End: Complemental strand, 3369037 - 3368980
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctccatata 285  Q
    ||||||||||||||||| |||||||  ||||| ||| |||  ||||||||||||||||    
T  3369037 ttagttaagaaccatacgaaaagcacctaaggaattgtactcaagttttctccatata 3368980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 4890600 - 4890652
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||| ||||||||    
T  4890600 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctcc 4890652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 530804 - 530669
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||||||||||||| |||||     ||||||||||||||||    
T  530804 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatgatggtgaatttagttaagaaccatac 530705  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||  ||||| ||| ||||||||||||||||    
T  530704 aaaaagcacctaaggaattgtacctaagttttctcc 530669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 4552855 - 4552956
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||||||||||||||||||||| |     ||||||||||||||||| ||||||||||||| ||| ||||||||||||||    
T  4552855 atataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaaccatacagaaagcatataaggaattgtacctaagttttct 4552954  T
Q  279 cc 280  Q
    ||    
T  4552955 cc 4552956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 42274593 - 42274492
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||||||||||||||||||||||     ||||||||||||||||| |||||||| ||||| ||| ||||||||||||||    
T  42274593 atataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttct 42274494  T
Q  279 cc 280  Q
    ||    
T  42274493 cc 42274492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 18417693 - 18417828
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatac 244  Q
    ||||||||||||| |||||||| |||        |||||| ||||||||||||||||||||||||||||||||||||||     || |||||||||||||    
T  18417693 gtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttaattaagaaccatac 18417792  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||  ||||| ||| ||||||||||||||||    
T  18417793 aaaaagcacctaaggaattgtacctaagttttctcc 18417828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 280
Target Start/End: Original strand, 55107561 - 55107695
Alignment:
Q  151 tatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccataca 245  Q
    |||||||||||| ||||||||||||        |||||| ||||||||||||||||||| |||||||||||||||||     ||||| ||||||||||||    
T  55107561 tatggttcttaactaaaaatacatattatttggatataacaaactttgagaaaattatgcatttgaggaaatcatggtaaatttagtaaagaaccataca 55107660  T
Q  246 aaaagcatataagggattatacctaagttttctcc 280  Q
    |||||||  ||||| ||| ||||||||||||||||    
T  55107661 aaaagcacctaaggaattgtacctaagttttctcc 55107695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 184 - 279
Target Start/End: Complemental strand, 32318821 - 32318721
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||||||| ||||||||||||||     ||||||||||||||||| ||||||| |||||| ||| ||||||||||||||    
T  32318821 atataacaaactttgagaaaattatggatctgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacataaggaattgtacctaagttttct 32318722  T
Q  279 c 279  Q
    |    
T  32318721 c 32318721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 1298948 - 1299083
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||| |||||||||     ||||||||||||||||     
T  1298948 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccataa 1299047  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||||||||||||||||    
T  1299048 gaaaagcacctaaggaattgtacctaagttttctcc 1299083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 13204413 - 13204548
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||| ||||||||||||||||||||||||||||     |||||||| ||||||||    
T  13204413 gtatggttcttaactaaaaatacatattttttggatataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaaaaaccatac 13204512  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     ||||| | |||||| ||| ||||||||||||||||    
T  13204513 gaaaagtacataaggaattgtacctaagttttctcc 13204548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 21048839 - 21048705
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||       | ||||| |||||| ||||||||||||||||||||||||||||||     |||||||||||||||||    
T  21048839 gtatggttcttaactaaaaatacatattttttga-tataacaaacttcgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatac 21048741  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||| ||| | ||| ||||||||||||||||    
T  21048740 gaaaagcatctaacgaattgtacctaagttttctcc 21048705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 24915895 - 24915794
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||||||| |||||||||     ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||    
T  24915895 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 24915796  T
Q  279 cc 280  Q
    ||    
T  24915795 cc 24915794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 282
Target Start/End: Complemental strand, 20435275 - 20435138
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||| |||||||||||||||||||||||||||||      |||||||||||||||||    
T  20435275 gtatggttcttaactaaaaatacatattttttggatataacaaacttcgagaaaattatggatttgaggaaatcatgatgaatttagttaagaaccatac 20435176  T
Q  245 aaaaagcatataagggattatacctaagttttctccat 282  Q
     |||||||| ||||| ||| ||  ||||||||||||||    
T  20435175 gaaaagcatctaaggaattgtatataagttttctccat 20435138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 284
Target Start/End: Original strand, 27434680 - 27434785
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||     ||||||||||||||||| |||||||  ||||| ||| ||| ||||||||||    
T  27434680 atataacaaactttgagaaaattatgaatttgaggaaattatggtaaatttagttaagaaccatacgaaaagcacctaaggaattgtacttaagttttct 27434779  T
Q  279 ccatat 284  Q
    ||||||    
T  27434780 ccatat 27434785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 24969642 - 24969543
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||| |||||||||||||||||     ||||||||||||||||| |||||||  ||| | ||| ||||||||||||||    
T  24969642 atataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaagaattgtacctaagttttct 24969543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 249
Target Start/End: Original strand, 35360712 - 35360816
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||||| ||||||||||||     |||||||||||||||||    
T  35360712 gtatggttcttaactaaaaatacatattttttagatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatac 35360811  T
Q  245 aaaaa 249  Q
     ||||    
T  35360812 gaaaa 35360816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 52824275 - 52824347
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaat 222  Q
    ||||||||||||| ||||||||||||        |||||||||||||||||||||||||||||||||||||||    
T  52824275 gtatggttcttaactaaaaatacatattttttagatataataaactttgagaaaattatggatttgaggaaat 52824347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 4895008 - 4895086
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt 228  Q
    |||| |||||||| ||||||||||||       ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  4895008 gtatagttcttaactaaaaatacatattttttgaatataacaaactttgagaaaattatgaatttgaggaaatcatggt 4895086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 23928668 - 23928568
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||| |||||||||||||||||||||||||||||||||     ||||||||||| ||||| |||| ||  ||||| ||| ||||||||||||||    
T  23928668 atataacaaattttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaatcatacgaaaaaca-ctaaggaattgtacctaagttttct 23928570  T
Q  279 cc 280  Q
    ||    
T  23928569 cc 23928568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 56552132 - 56552177
Alignment:
Q  185 tataataaactttgagaaaattatggatttgaggaaatcatggtta 230  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  56552132 tataacaaactttgagaaaattatggatttgaggaaatcatggtta 56552177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 279
Target Start/End: Complemental strand, 4688383 - 4688248
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnna-atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccata 243  Q
    ||||||||||||||||||||||||||         |||||| |||||||||||||||| || ||||||||||||||  |     ||||||||||||||||    
T  4688383 gtatggttcttaattaaaaatacatatttttttggatataacaaactttgagaaaattgtgaatttgaggaaatcacagtgaatttagttaagaaccata 4688284  T
Q  244 caaaaagcatataagggattatacctaagttttctc 279  Q
    | |||||||  ||||  ||| |||||||||||||||    
T  4688283 cgaaaagcacctaagaaattgtacctaagttttctc 4688248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 55049501 - 55049399
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||| |||||||||| |||||||||||||| |     |||||||||||| |||| |||||||  ||||| ||| ||| ||||||||||    
T  55049501 atataacaaactttgaaaaaattatgggtttgaggaaatcatagtgaatttagttaagaactatacgaaaagcacctaaggaattgtacataagttttct 55049402  T
Q  279 cca 281  Q
    |||    
T  55049401 cca 55049399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 1298964 - 1298912
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||||||||||||||||||||||  ||||| ||| ||||||||||||||||    
T  1298964 ttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 1298912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 28809982 - 28809846
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg------ttagttaagaaccata 243  Q
    ||||||||||||| || |||||||||        |||||| ||| ||||||||||||||||||||||| |||||||||      |||||||| ||| |||    
T  28809982 gtatggttcttaactagaaatacatattttttggatataacaaattttgagaaaattatggatttgagaaaatcatggtgaaatttagttaaaaacaata 28809883  T
Q  244 caaaaagcatataagggattatacctaagttttctcc 280  Q
    | |||||||  ||||  ||| ||||||||||||||||    
T  28809882 ccaaaagcacctaagaaattgtacctaagttttctcc 28809846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 249
Target Start/End: Original strand, 24294503 - 24294607
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||| ||||||||||||||||||||        |||||| ||||||||||||||||| | |||||||||||| ||||     |||||||||||||||||    
T  24294503 gtatgattcttaattaaaaatacatatttttttgatataacaaactttgagaaaattacgaatttgaggaaattatggtgaatttagttaagaaccatac 24294602  T
Q  245 aaaaa 249  Q
     ||||    
T  24294603 gaaaa 24294607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 55107576 - 55107521
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctccata 283  Q
    ||||||||||||||||  ||||||| |||||| ||| |||||||||||||||||||    
T  55107576 ttagttaagaaccatatgaaaagcacataaggaattgtacctaagttttctccata 55107521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 530788 - 530841
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcca 281  Q
    ||||||||||||||||| |||||||  ||||| ||| |||||||||||||||||    
T  530788 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcca 530841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 3422526 - 3422489
Alignment:
Q  188 aataaactttgagaaaattatggatttgaggaaatcat 225  Q
    |||||||||||||||||||||||||||||| |||||||    
T  3422526 aataaactttgagaaaattatggatttgagaaaatcat 3422489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 27434662 - 27434610
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||||||||| |||||||||||| |||||  ||| ||||||||||||||||    
T  27434662 ttagttaagaactatacaaaaagcacataagaaattgtacctaagttttctcc 27434610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 36031031 - 36030941
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||||||||  |  ||  ||||||||||| ||||| |||||||  ||||| ||| ||||||| ||||||    
T  36031031 atataacaaactttgagaaaattatggatttgaggtga--at--ttagttaagaaacatacgaaaagcacgtaaggaattgtacctaacttttct 36030941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 52824291 - 52824239
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  52824291 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 52824239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 2272443 - 2272514
Alignment:
Q  191 aaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataa 257  Q
    ||||||||| |||||||||||||| ||||||||||||     |||| |||||||||||| ||||||| ||||    
T  2272443 aaactttgataaaattatggatttaaggaaatcatggtgaatttagctaagaaccatacgaaaagcacataa 2272514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 18417709 - 18417658
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctc 279  Q
    ||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  18417709 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 18417658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 52587416 - 52587382
Alignment:
Q  184 atataataaactttgagaaaattatggatttgagg 218  Q
    |||||| ||||||||||||||||||||||||||||    
T  52587416 atataacaaactttgagaaaattatggatttgagg 52587382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 24969663 - 24969716
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcca 281  Q
    |||||||||||| |||| |||||||  ||||| ||| |||||||||||||||||    
T  24969663 ttagttaagaactatacgaaaagcacctaaggaattgtacctaagttttctcca 24969716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 9355641 - 9355581
Alignment:
Q  197 tgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagca 252  Q
    |||||||||||||||||| ||||||||||||     ||||||||||||||||  |||||||    
T  9355641 tgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatatgaaaagca 9355581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 20435259 - 20435311
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||| | ||| ||||||||||||||||    
T  20435259 ttagttaagaaccatacgaaaagcacctaaagaattgtacctaagttttctcc 20435311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 36657568 - 36657433
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||||||||||||      |||||||||||||||||    
T  36657568 gtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaaccatac 36657469  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||| ||||| ||| ||||||||||||||||    
T  36657468 gaaaagcatctaaggaattgtacctaagttttctcc 36657433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 191 - 285
Target Start/End: Original strand, 22176186 - 22176285
Alignment:
Q  191 aaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatacaaaaagcatataagggattatacctaagttttctccatata 285  Q
    ||||||||||||||||||||||||||||||||||| ||     |||||||||||||||||||||||| |||||| ||| |||||||||||||||| ||||    
T  22176186 aaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaagaaccatacaaaaagcacataaggaattgtacctaagttttctccgtata 22176285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 21969292 - 21969157
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||||| ||||||||||||     |||||||||||||||||    
T  21969292 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatac 21969193  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||||||||||||||||    
T  21969192 gaaaagcacctaaggaattgtacctaagttttctcc 21969157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 21991728 - 21991593
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||||| ||||||||||||     |||||||||||||||||    
T  21991728 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatac 21991629  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||||||||||||||||    
T  21991628 gaaaagcacctaaggaattgtacctaagttttctcc 21991593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 22101235 - 22101341
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||||||||||||||| |     ||||||||||||||||| ||||||  |||||| ||| ||||||||||||||    
T  22101235 atataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaagaaccatacgaaaagctcataaggaattgtacctaagttttct 22101334  T
Q  279 ccatata 285  Q
    |||||||    
T  22101335 ccatata 22101341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 36822895 - 36822760
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||| ||||||||||||||     |||||||||||||||||    
T  36822895 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatctgaggaaatcatggtatttttagttaagaaccatac 36822796  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||||||||||||||||    
T  36822795 gaaaagcagctaaggaattgtacctaagttttctcc 36822760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 3970626 - 3970491
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||||| ||||||||||||     |||||||||||||||||    
T  3970626 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatac 3970527  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| |||  |||||||||||||||    
T  3970526 gaaaagcacctaaggaattgcacctaagttttctcc 3970491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 45487835 - 45487970
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||| |||||||||||||| |||||||||||||||||     |||||||||||||||||    
T  45487835 gtatggttcttaactaaaaatacatattttttggatataacaaacattgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaaccatac 45487934  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||||||||||||||||    
T  45487935 gaaaagcacctaaggaattgtacctaagttttctcc 45487970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 282
Target Start/End: Complemental strand, 13078298 - 13078161
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||| ||||||| ||||||||||||        |||||| |||||||||||||||||||||||| ||||||||||||     |||||||||||||||||    
T  13078298 gtatgattcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatac 13078199  T
Q  245 aaaaagcatataagggattatacctaagttttctccat 282  Q
     |||||||  ||||| |||  |||||||||||||||||    
T  13078198 gaaaagcacctaaggaattgcacctaagttttctccat 13078161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 278
Target Start/End: Complemental strand, 32237529 - 32237396
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||||||||||||||||        |||||| |||||||||||||||||||||| |||| |||||||||     |||||||||||||||||    
T  32237529 gtatggttcttaattaaaaatacatattttttggatataacaaactttgagaaaattatggatctgagaaaatcatggtaaatttagttaagaaccatac 32237430  T
Q  245 aaaaagcatataagggattatacctaagttttct 278  Q
     |||| ||  ||||| ||| ||||||||||||||    
T  32237429 gaaaaacacctaaggaattgtacctaagttttct 32237396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 279
Target Start/End: Original strand, 10017151 - 10017279
Alignment:
Q  151 tatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggttagttaagaaccatacaaaaag 250  Q
    |||||||||||| ||||||||||||        |||||| ||||||||| ||||||||||||||||| |||||||| | | ||||||||||||| |||||    
T  10017151 tatggttcttaactaaaaatacatattttttggatataacaaactttgaaaaaattatggatttgagaaaatcatgatgaattaagaaccatacgaaaag 10017250  T
Q  251 catataagggattatacctaagttttctc 279  Q
    ||  ||||| ||| ||||||| |||||||    
T  10017251 cacctaaggaattgtacctaaattttctc 10017279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 12789642 - 12789777
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||| ||||||||| ||||||||||||||||||     || |||||||||||||    
T  12789642 gtatggttcttaactaaaaatacatattttttggatataacaaactttgaaaaaattatgaatttgaggaaatcatggtgaatttaattaagaaccatac 12789741  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||  ||||| ||| |||| |||||||||||    
T  12789742 aaaaagcacctaaggaattctaccaaagttttctcc 12789777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 26906490 - 26906625
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| |||||||| |||        |||||| ||||||||||||||||||| ||||||||||||||| |     |||||||||||||||||    
T  26906490 gtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaaccatac 26906589  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     ||||| || ||||| ||| ||||||||||||||||    
T  26906590 gaaaagtatctaaggaattgtacctaagttttctcc 26906625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 36278891 - 36278756
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| |||||||| |||        |||||| ||||||||||||||||||| ||||||||||||||| |     |||||||||||||||||    
T  36278891 gtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaaccatac 36278792  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     ||||| || ||||| ||| ||||||||||||||||    
T  36278791 gaaaagtatctaaggaattgtacctaagttttctcc 36278756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 4072374 - 4072273
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||| |||||||||||||     ||||||||||||||||| |||||||  ||||  ||| ||||||||||||||    
T  4072374 atataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttct 4072275  T
Q  279 cc 280  Q
    ||    
T  4072274 cc 4072273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 25446320 - 25446420
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||||||||||||||||||||||     ||||||||||||||||| |||||||  ||||| ||| || |||||||||||    
T  25446320 atataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgta-ctaagttttct 25446418  T
Q  279 cc 280  Q
    ||    
T  25446419 cc 25446420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 50099504 - 50099605
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||     ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||    
T  50099504 atataacaaactttgagaaaattatgaatttgaggaaattatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 50099603  T
Q  279 cc 280  Q
    ||    
T  50099604 cc 50099605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 154 - 280
Target Start/End: Complemental strand, 10441389 - 10441258
Alignment:
Q  154 ggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatacaaaa 248  Q
    ||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||||||||||||      ||||||||||| ||||| |||    
T  10441389 ggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaatcataccaaa 10441290  T
Q  249 agcatataagggattatacctaagttttctcc 280  Q
    ||||  ||||| ||| ||| ||||||||||||    
T  10441289 agcacctaaggaattgtacttaagttttctcc 10441258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 43639182 - 43639076
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||||||||||| ||||||||||     || |||||||| ||||| |||||||  ||||| |||||| |||||||||||    
T  43639182 atataacaaactttgagaaaattatggatttgaagaaatcatggtgaatttggttaagaatcatacgaaaagcacctaaggaattataactaagttttct 43639083  T
Q  279 ccatata 285  Q
    || ||||    
T  43639082 ccttata 43639076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 12838113 - 12838191
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt 228  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||||||||||||||    
T  12838113 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggt 12838191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 35368803 - 35368904
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||||||| |||||||||     |||||||| |||||||| |||| || |||||  ||| ||||||||||||||    
T  35368803 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaaaaccatacgaaaaacacataagaaattgtacctaagttttct 35368902  T
Q  279 cc 280  Q
    ||    
T  35368903 cc 35368904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 279
Target Start/End: Original strand, 8831811 - 8831911
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||||||||||| ||||||||||     ||||||||||||||||| |||||||  |||   ||| ||||||||||||||    
T  8831811 atataacaaactttgagaaaattatggatttgaagaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttct 8831910  T
Q  279 c 279  Q
    |    
T  8831911 c 8831911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 10117586 - 10117682
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||| ||||||||||||||||||||||||||| ||||     ||||||||||||||||| |||||||  ||||| ||| ||||||| ||||||||    
T  10117586 atataacaaactttgagaaaattatggatttgagaaaattgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctcc 10117682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 282
Target Start/End: Complemental strand, 25488476 - 25488339
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||| ||| ||||||||||     |||||||||||| ||||    
T  25488476 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatatgaagaaatcatggtgaatttagttaagaactatac 25488377  T
Q  245 aaaaagcatataagggattatacctaagttttctccat 282  Q
     |||||||  ||||| ||| ||| |||| |||||||||    
T  25488376 gaaaagcacctaaggaattgtacttaagatttctccat 25488339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 279
Target Start/End: Complemental strand, 13724088 - 13723989
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggttagt----taagaaccatacaaaaagcatataagggattatacctaagttttctc 279  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||| | |    ||||||||||||||||||||  ||||  ||| |||||||||||||||    
T  13724088 atataacaaactttgagaaaattatgaatttgaagaaatcatggtgaatttagtaagaaccatacaaaaagcacctaagaaattgtacctaagttttctc 13723989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 25561047 - 25561182
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||| ||| ||||||||||     |||||||||||| ||||    
T  25561047 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatatgaagaaatcatggtgaatttagttaagaactatac 25561146  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||| |||| |||||||    
T  25561147 gaaaagcacctaaggaattgtacttaagatttctcc 25561182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 36329315 - 36329188
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggttagttaagaaccatacaaaaa 249  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||||||||| ||  ||  ||| |||||||| |||||||||    
T  36329315 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagg-aagaat--ttatttaagaacaatacaaaaa 36329219  T
Q  250 gcatataagggattatacctaagttttctcc 280  Q
    | || ||||  ||| ||||||||||||||||    
T  36329218 gtatctaagaaattgtacctaagttttctcc 36329188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 39850446 - 39850344
Alignment:
Q  184 atataataaactt-tgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttc 277  Q
    |||||| |||||| |||||||||||||||||||||||||||||||     ||||||||||||||||| |||| ||  ||||| ||  |||||||||||||    
T  39850446 atataacaaacttgtgagaaaattatggatttgaggaaatcatggtatttttagttaagaaccatacgaaaaacacctaaggaatagtacctaagttttc 39850347  T
Q  278 tcc 280  Q
    |||    
T  39850346 tcc 39850344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 280
Target Start/End: Original strand, 46679338 - 46679432
Alignment:
Q  191 aaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||||||||||||||||||||||||||||| ||||     ||||||||||||| || |||||||||  |||| ||| ||| ||||||||||||    
T  46679338 aaactttgagaaaattatggatttgaggaaattatggtgaatttagttaagaaccgtataaaaagcatccaaggaattgtacttaagttttctcc 46679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 280
Target Start/End: Original strand, 26977764 - 26977861
Alignment:
Q  188 aataaactttgagaaaattatggatttgaggaaatcat-----ggttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||||||||||||||||||||||||       ||||||||||||||||  ||||| || ||||  ||| ||||||||||||||||    
T  26977764 aataaactttgagaaaattatggatttgaggaaatcatactaaatttagttaagaaccatatgaaaagtatctaagaaattgtacctaagttttctcc 26977861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 55340394 - 55340293
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||     |||||||||| ||||| |||| || |||||  ||| ||||||| ||||||    
T  55340394 atataacaaactttgagaaaattatggatttgagaaaatcatggtgaatatagttaagaatcatacgaaaaacacataagaaattgtacctaaattttct 55340295  T
Q  279 cc 280  Q
    ||    
T  55340294 cc 55340293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 279
Target Start/End: Original strand, 10254639 - 10254739
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||      ||||||||||||||||| |||||||  ||||| ||| ||||||| ||||||    
T  10254639 atataacaaactttgaaaaaattatggatttgagaaaatcatgatgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttct 10254738  T
Q  279 c 279  Q
    |    
T  10254739 c 10254739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 282
Target Start/End: Complemental strand, 45713038 - 45712901
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    |||||||||| || ||||||||||||        |||||| ||||||||| |||||||||| ||||||||||||||||     |||||||||||  | |     
T  45713038 gtatggttctaaactaaaaatacatattttttggatataacaaactttgataaaattatggctttgaggaaatcatggtgaatttagttaagaaaaaaaa 45712939  T
Q  245 aaaaagcatataagggattatacctaagttttctccat 282  Q
    ||||||||  ||||| ||| ||||||||||||||||||    
T  45712938 aaaaagcacctaaggaattgtacctaagttttctccat 45712901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 44611482 - 44611382
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||     |||||||||||| |||||||||| |  ||||| ||| || |||||||||||    
T  44611482 atataacaaactttgagaaaattatgaatttgaagaaatcatggtgaatttagttaagaactatacaaaaagtacctaaggaattgta-ctaagttttct 44611384  T
Q  279 cc 280  Q
    ||    
T  44611383 cc 44611382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 25488460 - 25488512
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||||||||||||||||||||||  ||||| ||| ||||||||||||||||    
T  25488460 ttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 25488512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 25561063 - 25561011
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||||||||||||||||||||||  ||||| ||| ||||||||||||||||    
T  25561063 ttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 25561011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 35368601 - 35368549
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||    
T  35368601 ttagttaagaaccatacgaaaagcacataaggaattgtacctaagttttctcc 35368549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 36657552 - 36657604
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||    
T  36657552 ttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 36657604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 404115 - 404213
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||| || |||||||||||||||     |||||||||||||||||  ||||||| ||| | ||| || |||||||||||    
T  404115 atataacaaactttgagaaaattatagacttgaggaaatcatggtgaatttagttaagaaccatacggaaagcatctaaagaattgta-ctaagttttct 404213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 276
Target Start/End: Complemental strand, 1476650 - 1476555
Alignment:
Q  186 ataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagtttt 276  Q
    |||| ||||||||||| |||||||||||| ||||||||||||     |||| | |||||||||| |||||||  ||||| ||| ||||||||||||    
T  1476650 ataacaaactttgagagaattatggatttaaggaaatcatggtgaatttaggttagaaccataccaaaagcacctaaggaattgtacctaagtttt 1476555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 46664212 - 46664284
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaat 222  Q
    |||| |||||||| ||||||||||||       ||||||| ||||||||||||||||||| ||||||||||||    
T  46664212 gtatagttcttaactaaaaatacatatttttttaatataacaaactttgagaaaattatgaatttgaggaaat 46664284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 157069 - 157031
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaat 222  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  157069 atataacaaactttgagaaaattatggatttgaggaaat 157031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 43150516 - 43150591
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcat 225  Q
    |||||||| |||| ||||||||||||        |||||| ||||||||||||||||||| |||||||||||||||    
T  43150516 gtatggtttttaactaaaaatacatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcat 43150591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 26976939 - 26976902
Alignment:
Q  188 aataaactttgagaaaattatggatttgaggaaatcat 225  Q
    |||||||||||||||||||||||||||||| |||||||    
T  26976939 aataaactttgagaaaattatggatttgagaaaatcat 26976902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 21969276 - 21969328
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  21969276 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 21969328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 21991712 - 21991764
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  21991712 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 21991764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 45487851 - 45487799
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  45487851 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 45487799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 37536941 - 37537020
Alignment:
Q  185 tataataaactttgagaaaattatggatttgaggaaatcat-----ggttagttaagaaccatacaaaaagcatataagg 259  Q
    ||||| ||||||||||||||||||||||| |||||||| ||       ||||||||||||||||||||||| || |||||    
T  37536941 tataacaaactttgagaaaattatggattagaggaaattataaataatttagttaagaaccatacaaaaagtatttaagg 37537020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 12838129 - 12838079
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||||||||||||||||||||||  ||||| ||| ||| ||||||||||    
T  12838129 ttagttaagaaccatacaaaaagcacctaaggaattgtacataagttttct 12838079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 44920747 - 44920706
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcat 225  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  44920747 atataataaactttgagaaaattataaatttgagaaaatcat 44920706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 4072393 - 4072445
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||| ||  ||||| ||| ||||||||||||||||    
T  4072393 ttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcc 4072445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 10441377 - 10441429
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||| ||| |||||||  ||||| ||| ||||||||||||||||    
T  10441377 ttagttaagaaccgtaccaaaagcacctaaggaattgtacctaagttttctcc 10441429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 12789658 - 12789606
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||| ||  ||||| ||| ||||||||||||||||    
T  12789658 ttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcc 12789606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 26906506 - 26906454
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| ||||| |  ||||| ||| ||||||||||||||||    
T  26906506 ttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcc 26906454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 32237517 - 32237565
Alignment:
Q  232 ttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  32237517 ttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 32237565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 36278875 - 36278927
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| ||||| |  ||||| ||| ||||||||||||||||    
T  36278875 ttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcc 36278927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 39850464 - 39850516
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||| ||||| |||||||  ||||| ||| ||||||||||||||||    
T  39850464 ttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcc 39850516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 49984001 - 49984045
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggt 228  Q
    |||||||||| ||||| |||||||||||||| || ||||||||||    
T  49984001 atataataaattttgaaaaaattatggatttaagaaaatcatggt 49984045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 24101967 - 24101832
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||||||||||||||||||     |||||||||||||||||    
T  24101967 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtatatttagttaagaaccatac 24101868  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||||||||||||||||    
T  24101867 gaaaagcacctaaggaattgtacctaagttttctcc 24101832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 150 - 282
Target Start/End: Original strand, 45408661 - 45408798
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||||||||||||||     || |||||||||||||    
T  45408661 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttaattaagaaccatac 45408760  T
Q  245 aaaaagcatataagggattatacctaagttttctccat 282  Q
     |||||||  ||||| ||| ||||||||||||||||||    
T  45408761 gaaaagcacctaaggaattgtacctaagttttctccat 45408798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 34490492 - 34490627
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||| ||||||||||||||     |||||||||||||||||    
T  34490492 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatctgaggaaatcatggtatttttagttaagaaccatac 34490591  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||||||||||||||||    
T  34490592 gaaaagcacctaaggaattgtacctaagttttctcc 34490627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 22269792 - 22269893
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||||||||||||||||      ||||||||||||||||| |||||||| ||||| ||| ||| ||||||||||    
T  22269792 atataacaaactttgagaaaattatggatttgaggaaatcatgttttttttagttaagaaccatacgaaaagcatctaaggaattgtacgtaagttttct 22269891  T
Q  279 cc 280  Q
    ||    
T  22269892 cc 22269893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 43476016 - 43476117
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||||||||||||||||||||||| |||||||||||||||||     ||||||||||||||||| |||| ||  ||||| ||||||||||| ||||||    
T  43476016 atataataaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaaccatacgaaaaacacctaaggaattatacctaaattttct 43476115  T
Q  279 cc 280  Q
    ||    
T  43476116 cc 43476117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 150 - 281
Target Start/End: Complemental strand, 12850677 - 12850541
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||||||||||||||||||     |||||||| ||||||||    
T  12850677 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttagttaaaaaccatac 12850578  T
Q  245 aaaaagcatataagggattatacctaagttttctcca 281  Q
    |||||| |  ||||| ||| ||||||| |||| ||||    
T  12850577 aaaaagtacctaaggaattgtacctaaattttatcca 12850541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 9933704 - 9933570
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||||||||||||||||||||||||||||||| |||||||||     ||||||||||||||||     
T  9933704 gtatggttcttaactaaaaatacatattttttagatataataaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccatag 9933605  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||| | ||| ||||||||||||||||    
T  9933604 gaaaagca-ctaatgaattgtacctaagttttctcc 9933570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 1924081 - 1923980
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||| |||||||||||||     ||||||||||||||||| |||||||  ||||  ||| ||||||||||||||    
T  1924081 atataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttct 1923982  T
Q  279 cc 280  Q
    ||    
T  1923981 cc 1923980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 7737135 - 7737236
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||||| ||||||||||||||||     ||||||||||| ||||| |||||||  ||||| ||| ||||||||||||||    
T  7737135 atataacaaactttgagaaaattatggctttgaggaaatcatggtaaatttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttct 7737234  T
Q  279 cc 280  Q
    ||    
T  7737235 cc 7737236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 42713878 - 42713777
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||||||||||||||||||||||||||||||| |||||||||     ||||||||||||||||| |||| ||  ||||| |||||| |||| ||||||    
T  42713878 atataataaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccatacgaaaaacacctaaggaattatatctaaattttct 42713779  T
Q  279 cc 280  Q
    ||    
T  42713778 cc 42713777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 281
Target Start/End: Original strand, 2818743 - 2818838
Alignment:
Q  191 aaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcca 281  Q
    |||||||||||||||||||||||||||||||||||||     ||||||||||||||||| |||| ||  ||| | ||| |||||||||||||||||    
T  2818743 aaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaaacacctaaagaattgtacctaagttttctcca 2818838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 6605805 - 6605905
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggttagt----taagaaccatacaaaaagcatataagggattatacctaagttttctc 279  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| | |    ||||||||||||||||||||  ||| | ||| |||||||||||||||    
T  6605805 atataacaaactttgagaaaattatgcatttgaggaaatcatggtaaatttagtaagaaccatacaaaaagcacctaaagaattgtacctaagttttctc 6605904  T
Q  280 c 280  Q
    |    
T  6605905 c 6605905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 3116912 - 3117047
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcat-----ggttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||| |||||||       |||||||||||||||||    
T  3116912 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcataatgaatttagttaagaaccatac 3117011  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  || || ||| ||||||||||||||||    
T  3117012 gaaaagcagctatggaattgtacctaagttttctcc 3117047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 29229499 - 29229361
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaacttt-gagaaaattatggatttgaggaaatcatggt-----tagttaagaaccata 243  Q
    ||||||||||||| ||||||||||||        |||||||||||||| ||||||||||||||||||||||||||||| |     |||||||||| ||||    
T  29229499 gtatggttcttaactaaaaatacatattttttggatataataaacttttgagaaaattatggatttgaggaaatcatgatgaatatagttaagaatcata 29229400  T
Q  244 c--aaaaagcatataagggattatacctaagttttctcc 280  Q
    |  |||||||| |||||  ||| ||||||||||||||||    
T  29229399 cgaaaaaagcacataagtaattgtacctaagttttctcc 29229361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 29342799 - 29342661
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaacttt-gagaaaattatggatttgaggaaatcatggt-----tagttaagaaccata 243  Q
    ||||||||||||| ||||||||||||        |||||||||||||| ||||||||||||||||||||||||||||| |     |||||||||| ||||    
T  29342799 gtatggttcttaactaaaaatacatattttttggatataataaacttttgagaaaattatggatttgaggaaatcatgatgaatatagttaagaatcata 29342700  T
Q  244 c--aaaaagcatataagggattatacctaagttttctcc 280  Q
    |  |||||||| |||||  ||| ||||||||||||||||    
T  29342699 cgaaaaaagcacataagtaattgtacctaagttttctcc 29342661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 27920642 - 27920743
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||| |||||||||||||||||||||||||||     ||||||||||||||||| |||||||  |||   ||| ||||||||||||||    
T  27920642 atataacaaactttgaaaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcagctaaaaaattgtacctaagttttct 27920741  T
Q  279 cc 280  Q
    ||    
T  27920742 cc 27920743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 285
Target Start/End: Original strand, 16705769 - 16705909
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||| |||||||||| |||||| ||||||| ||     ||||||| ||||||||    
T  16705769 gtatggttcttaactaaaaatacatattttttggatataacaaactttgataaaattatggctttgagaaaatcatagtgaatttagttaaaaaccatac 16705868  T
Q  245 aaaaagcatataagggattatacctaagttttctccatata 285  Q
     |||||||  ||||| ||| ||||||| |||||||||||||    
T  16705869 gaaaagcacctaaggaattgtacctaaattttctccatata 16705909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 23835947 - 23835991
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatggt 228  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  23835947 atataacaaactttgagaaaattatggatttgaggaaatcatggt 23835991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 281
Target Start/End: Complemental strand, 9281482 - 9281346
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| |||||||| |||        |||||| ||||||||||||||||||| ||||||||||||||| |     ||||||||||||||||     
T  9281482 gtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaaccatat 9281383  T
Q  245 aaaaagcatataagggattatacctaagttttctcca 281  Q
     ||||| |  ||||| ||| |||| ||||||||||||    
T  9281382 gaaaagtacctaaggaattgtaccaaagttttctcca 9281346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 34455921 - 34455993
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaat 222  Q
    ||||||||||||||||||||||||||        |||||| |||||||||||||||||| |||||||||||||    
T  34455921 gtatggttcttaattaaaaatacatattttttggatataacaaactttgagaaaattatagatttgaggaaat 34455993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 20892955 - 20893060
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||||||||||| ||||| || |     ||||||||||| ||||| |||||||  ||||| |||||| |||||||||||    
T  20892955 atataacaaactttgagaaaattatggatttgatgaaattattgtatttttagttaagaatcatacgaaaagcacctaaggaattata-ctaagttttct 20893053  T
Q  279 ccatata 285  Q
    || ||||    
T  20893054 ccttata 20893060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 9850892 - 9850786
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||       | ||||| ||| |||||||||||||||||||| || |||||||||     |||||||||||||||||    
T  9850892 gtatggttcttaactaaaaatacatattttttga-tataacaaattttgagaaaattatggatttaagaaaatcatggtaaatttagttaagaaccatac 9850794  T
Q  245 aaaaagca 252  Q
     |||||||    
T  9850793 gaaaagca 9850786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 16705785 - 16705733
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  16705785 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 16705733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 45408677 - 45408625
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||||||||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  45408677 ttagttaagaaccatacaaaaaacacctaaggaattgtacctaagttttctcc 45408625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 24101951 - 24102006
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctccata 283  Q
    ||||||||||||||||| |||||||  ||||| ||| ||| |||||||||||||||    
T  24101951 ttagttaagaaccatacgaaaagcacctaaggaattgtacttaagttttctccata 24102006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 12850661 - 12850715
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctccat 282  Q
    ||||||||||||||||| |||||||| | ||| |||  |||||||||||||||||    
T  12850661 ttagttaagaaccatacgaaaagcatctgaggaattggacctaagttttctccat 12850715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 34455933 - 34455883
Alignment:
Q  232 ttaagaaccatacaaaaagcatataagggattatacctaagttttctccat 282  Q
    ||||||||||||| |||||||  ||||| ||| ||||||||||||||||||    
T  34455933 ttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccat 34455883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 1924100 - 1924152
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||| ||  ||||| ||| ||||||||||||||||    
T  1924100 ttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcc 1924152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 273
Target Start/End: Original strand, 7116450 - 7116534
Alignment:
Q  194 ctttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatacaaaaagcatataagggattatacctaagt 273  Q
    ||||||||||||||||||||||| ||||| |||||     || ||||||||||||| |||| ||| ||||  ||| |||||||||    
T  7116450 ctttgagaaaattatggatttgatgaaattatggtaaatttatttaagaaccatacgaaaaacatctaagaaattgtacctaagt 7116534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 9281466 - 9281518
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| ||||| |  ||||| ||| ||||||||||||||||    
T  9281466 ttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcc 9281518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 20892936 - 20892884
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||  ||| ||||||||||||||||    
T  20892936 ttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 20892884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 23835928 - 23835876
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||| ||| ||| ||||||||||||    
T  23835928 ttagttaagaaccatacgaaaagcacctaaggaattgtacataagttttctcc 23835876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 40362552 - 40362627
Alignment:
Q  183 aatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcata 254  Q
    ||||||| ||||| |||||||||||| |||||||| |||||||||     ||||||||||||||||| |||| ||||    
T  40362552 aatataacaaactatgagaaaattat-gatttgagaaaatcatggtgaatttagttaagaaccatacgaaaaacata 40362627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 285
Target Start/End: Original strand, 40891053 - 40891189
Alignment:
Q  154 ggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaa 248  Q
    ||||||||| ||||||||||||        |||||| |||||||||||||||||||||||||||||||||||||     ||||||||||||||||| |||    
T  40891053 ggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaa 40891152  T
Q  249 agcatataagggattatacctaagttttctccatata 285  Q
    ||||  ||||| ||| |||||||||||||| ||||||    
T  40891153 agcacctaaggaattgtacctaagttttcttcatata 40891189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 38629510 - 38629645
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||||||||||||||||||||||| |||||||||||||||||     |||||||||||||||||    
T  38629510 gtatggttcttaactaaaaatacatattttttggatataataaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaaccatac 38629609  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||| ||  ||||| ||| ||||||||||||||||    
T  38629610 gaaaaacacctaaggaattgtacctaagttttctcc 38629645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 150 - 278
Target Start/End: Original strand, 37114274 - 37114407
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| || |||||||||     |||||||||||||||||    
T  37114274 gtatggttcttaattaaaaatacatattttttggatataataaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatac 37114373  T
Q  245 aaaaagcatataagggattatacctaagttttct 278  Q
    ||||| ||| ||| | ||| ||||||| ||||||    
T  37114374 aaaaaacatctaaagaattgtacctaaattttct 37114407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 252
Target Start/End: Complemental strand, 4262110 - 4262004
Alignment:
Q  151 tatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccataca 245  Q
    |||||||||||||||||||||||||       ||||||| ||||||||||||||||||||| ||||||||||||| |     |||||||||||||||||     
T  4262110 tatggttcttaattaaaaatacatattttttgaatataacaaactttgagaaaattatggacttgaggaaatcatagtgaatttagttaagaaccatacg 4262011  T
Q  246 aaaagca 252  Q
    |||||||    
T  4262010 aaaagca 4262004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 17426729 - 17426628
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||| ||||||||||||||||||     ||||||||||||||||| |||||||  ||| | ||| ||||||||||||||    
T  17426729 atataacaaactttgagaaaattatagatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaatgaattgtacctaagttttct 17426630  T
Q  279 cc 280  Q
    ||    
T  17426629 cc 17426628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 24741924 - 24741827
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagtttt 276  Q
    |||||||||||| ||||||||| |||||||||||||||||||||     ||||||||||||||||| |||||||  ||||| ||| ||||||||||||    
T  24741924 atataataaactctgagaaaatcatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 24741827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 283
Target Start/End: Complemental strand, 29781094 - 29780956
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| |||||||||||||||||||||||||||||||| ||||     |||||||| ||||||||    
T  29781094 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaattatggtaaatttagttaaaaaccatac 29780995  T
Q  245 aaaaagcatataagggattatacctaagttttctccata 283  Q
     |||||||  ||||| ||| ||||||| |||| ||||||    
T  29780994 gaaaagcacctaaggaattgtacctaaattttatccata 29780956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 282
Target Start/End: Complemental strand, 33100746 - 33100643
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||||||||||||||||| | ||     ||||||||||||||||| |||||||  ||||  ||| ||||||||||||||    
T  33100746 atataacaaactttgagaaaattatggatttgaggaaataacggtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttct 33100647  T
Q  279 ccat 282  Q
    ||||    
T  33100646 ccat 33100643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 38520054 - 38520189
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| |||||||| |||        |||||| ||||||||||||||||||| |||||||||||||||||     |||||||| || |||||    
T  38520054 gtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaaaaaacatac 38520153  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     |||||||  ||||| ||| ||||||||||||||||    
T  38520154 gaaaagcacttaaggaattgtacctaagttttctcc 38520189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 8210393 - 8210494
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||||||||||||||||      || |||||||| |||||||||| ||| ||||| ||| ||| ||||||||||    
T  8210393 atataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttggttaagaatcatacaaaaaacatctaaggaattgtacttaagttttct 8210492  T
Q  279 cc 280  Q
    ||    
T  8210493 cc 8210494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 280
Target Start/End: Original strand, 15882279 - 15882372
Alignment:
Q  192 aactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||| |||||||||||||| ||||||||||     |||||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  15882279 aactttgagaatattatggatttgagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 15882372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 12234502 - 12234638
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaa-ctttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccata 243  Q
    ||||||||||||| ||||||||||||        |||||| ||| |||||||||||||||| ||||||||||||||| |     |||||||| |||||||    
T  12234502 gtatggttcttaactaaaaatacatattttttggatataacaaaactttgagaaaattatgaatttgaggaaatcatcgtgaatttagttaataaccata 12234601  T
Q  244 caaaaagcatataagggattatacctaagttttctcc 280  Q
    | |||||||| ||||  ||| ||||||||||||||||    
T  12234602 cgaaaagcatctaagaaattgtacctaagttttctcc 12234638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 280
Target Start/End: Complemental strand, 23940906 - 23940804
Alignment:
Q  183 aatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttc 277  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||     ||||||||||| ||||| |||||||  ||||  ||| |||| ||||||||    
T  23940906 aatataacaaactttgagaaaattacggatttgaggaaatcatggtgaatttagttaagaatcatacgaaaagcacttaagaaattgtaccgaagttttc 23940807  T
Q  278 tcc 280  Q
    |||    
T  23940806 tcc 23940804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 38515585 - 38515678
Alignment:
Q  195 tttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctccata 283  Q
    ||||||||||||||||||||||||||||||| |     ||| |||| ||||| || ||| |||| ||||| ||| |||||||||||||||||||    
T  38515585 tttgagaaaattatggatttgaggaaatcattgtatttttaattaaaaaccacacgaaatgcatctaaggaattgtacctaagttttctccata 38515678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 15882252 - 15882200
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||||||||||||||||||||||  ||||| ||| ||||||||||||||||    
T  15882252 ttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 15882200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 11828697 - 11828627
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaa 249  Q
    |||||| ||||||||||||||| |||||||||||||||| ||||     ||||||||||||||||| ||||    
T  11828697 atataacaaactttgagaaaataatggatttgaggaaattatggtgaatttagttaagaaccatacgaaaa 11828627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 276
Target Start/End: Original strand, 35467247 - 35467337
Alignment:
Q  191 aaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatacaaaaagcatataagggattatacctaagtttt 276  Q
    ||||||| |||||||||||||||| | ||||||||| |     |||||||||||||||| ||||||| |||||| ||| ||| ||||||||    
T  35467247 aaactttaagaaaattatggatttaaagaaatcatgatgaatttagttaagaaccatacgaaaagcacataaggaattgtacgtaagtttt 35467337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 29781078 - 29781130
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||| ||||| |||  |||||||||||||||    
T  29781078 ttagttaagaaccatacgaaaagcatctaaggaattggacctaagttttctcc 29781130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 38520070 - 38520018
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||  ||||| ||||||||||| ||||||||    
T  38520070 ttagttaagaaccatacgaaaagcaactaaggaattatacctaaattttctcc 38520018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 24211401 - 24211450
Alignment:
Q  232 ttaagaaccatacaaaaagcatataagggattatacctaagttttctcca 281  Q
    ||||||||||||| |||||||  ||||| ||| |||||||||||||||||    
T  24211401 ttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcca 24211450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 25264328 - 25264287
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcat 225  Q
    |||||| ||||||| ||||||||||| |||||||||||||||    
T  25264328 atataacaaactttaagaaaattatgaatttgaggaaatcat 25264287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 8210375 - 8210323
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||| ||||| |||||||  ||||| ||| ||||||||||||||||    
T  8210375 ttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcc 8210323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 12234518 - 12234466
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| |||||||   || | ||||||||||||||||||||    
T  12234518 ttagttaagaaccatacgaaaagcacccaaagaattatacctaagttttctcc 12234466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 150 - 282
Target Start/End: Original strand, 45870 - 46007
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||| |||||||||     ||||||||||||||||     
T  45870 gtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccataa 45969  T
Q  245 aaaaagcatataagggattatacctaagttttctccat 282  Q
     |||||||  ||||| ||| ||||||||||||||||||    
T  45970 gaaaagcacctaaggaattgtacctaagttttctccat 46007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 45886 - 45834
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||||||||||||||||||||||  ||||| ||| ||||||||||||||||    
T  45886 ttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 45834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 150 - 279
Target Start/End: Original strand, 48162 - 48296
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    |||||||| |||||||||||||||||        |||||| ||||||||||||||||||||||||||| |||||||||     |||||||||||| ||||    
T  48162 gtatggtttttaattaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaactatac 48261  T
Q  245 aaaaagcatataagggattatacctaagttttctc 279  Q
     |||||||| ||||| ||| || ||||||||||||    
T  48262 gaaaagcatctaaggaattgtatctaagttttctc 48296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 2040 - 1939
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||| ||||||||||||||||||||||||||||     |||||||||||||||||||||||||  |||   ||||||||||| ||||||    
T  2040 atataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacaaaaagcacctaaacaattatacctaaattttct 1941  T
Q  279 cc 280  Q
    ||    
T  1940 cc 1939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 2059 - 2111
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||||||||||||| ||||||||  ||||| ||| ||||||||||||||||    
T  2059 ttagttaagaaccatataaaaagcacctaaggaattgtacctaagttttctcc 2111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 7156 - 7257
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatg-----gttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| ||||||||||||||||||||||||||||||||||||      ||||||||||||||||| |||||||  ||||| ||  ||||||| ||||||    
T  7156 atataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaaccatacgaaaagcacctaaggaatcgtacctaaattttct 7255  T
Q  279 cc 280  Q
    ||    
T  7256 cc 7257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 281
Target Start/End: Complemental strand, 3528 - 3392
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatggt-----tagttaagaaccatac 244  Q
    ||||||||||||| ||||||||||||        |||||| ||||||||| ||||||||  ||||||||||||||||||     || |||||||||||||    
T  3528 gtatggttcttaaataaaaatacatattttttggatataacaaactttgataaaattataaatttgaggaaatcatggtgaatttaattaagaaccatac 3429  T
Q  245 aaaaagcatataagggattatacctaagttttctcca 281  Q
    ||||||||   || | ||| |||||||||||||||||    
T  3428 aaaaagcaccaaatgaattgtacctaagttttctcca 3392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 280
Target Start/End: Original strand, 51099 - 51234
Alignment:
Q  150 gtatggttcttaattaaaaatacatannnnnnnaatataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatac 244  Q
    ||||||||||||| |||||||| |||        |||||| ||||||||||||||||||| |||| |||||||||| |     ||||||||||||||||     
T  51099 gtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttaaggaaatcatagtgaatttagttaagaaccatat 51198  T
Q  245 aaaaagcatataagggattatacctaagttttctcc 280  Q
     ||||| |  ||||| ||| ||||||||||||||||    
T  51199 gaaaagtacctaaggaattgtacctaagttttctcc 51234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 51115 - 51063
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    ||||||||||||||||| ||||| |  ||||| ||| ||||||||||||||||    
T  51115 ttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcc 51063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 10185 - 10286
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| |||||||||||||||||||||| |||| |||||||||     ||| |||||||  |||| ||||||| |||||  ||| ||||||| ||||||    
T  10185 atataacaaactttgagaaaattatggatgtgagaaaatcatggtgaatttacttaagaattatacgaaaagcacataagaaattgtacctaaattttct 10284  T
Q  279 cc 280  Q
    ||    
T  10285 cc 10286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 5797 - 5878
Alignment:
Q  206 tatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagg--gattatacctaagttttctcc 280  Q
    ||||||||||||||||||||||     ||||||||||||||||| |||||||  |||||   ||| ||||||||||||||||    
T  5797 tatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaaaattgtacctaagttttctcc 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 72340 - 72287
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcca 281  Q
    |||| |||||| |||||||||||||| ||||| ||| |||||||||| ||||||    
T  72340 ttagctaagaatcatacaaaaagcatctaaggaattgtacctaagttctctcca 72287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 279
Target Start/End: Original strand, 14512 - 14612
Alignment:
Q  184 atataataaactttgagaaaattatggatttgaggaaatcatgg-----ttagttaagaaccatacaaaaagcatataagggattatacctaagttttct 278  Q
    |||||| | |||||||||||||||||||| ||| ||| | ||||     |||||||||||| |||| |||||||   |||| ||| ||||||||||||||    
T  14512 atataacagactttgagaaaattatggatatgacgaagtaatggtgaatttagttaagaacgatacgaaaagcacccaaggaattgtacctaagttttct 14611  T
Q  279 c 279  Q
    |    
T  14612 c 14612  T

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Target: scaffold0069 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 26457 - 26405
Alignment:
Q  228 ttagttaagaaccatacaaaaagcatataagggattatacctaagttttctcc 280  Q
    |||||||| |||||||| |||||||  ||||| ||| ||||||||||||||||    
T  26457 ttagttaataaccatacgaaaagcacctaaggaattgtacctaagttttctcc 26405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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