View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14504_low_41 (Length: 286)
Name: NF14504_low_41
Description: NF14504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14504_low_41 |
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Alignment Details
Target: chr6 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 2 - 280
Target Start/End: Original strand, 7934667 - 7934946
Alignment:
| Q |
2 |
gttctttgtttctcgataagattcagattttagattaaaaaataataattggtcataagataccatttagtgactacctatgatgattatatgaattaat |
101 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
7934667 |
gttctttgtttctcgataagattcagattttagattaaaaaataataattggtcataagataccatttagtgactacctaggatgattatatgaattaat |
7934766 |
T |
|
| Q |
102 |
atttaaccaaaagttaaggccaatgttttgcatagtttgctttgttgggaacaatgtttatctccattacaaacaaatgtttcatcattatcttattttt |
201 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
7934767 |
atttaaccaaaagttaaggccaatgttttgcatagtttgctttgttgggaacaatgtttgtctccattacaaacaaatgtttcatcattatcttattttt |
7934866 |
T |
|
| Q |
202 |
cattgttgtgtcttatgtacatccattatataaatgcaatggcctt-gcataattgtccacactgataccctcccctttg |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
7934867 |
cattgttgtgtcttatgtacatccattatataaatgcaatggccttcacataattgtccacactgataccctcccctttg |
7934946 |
T |
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