View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14504_low_9 (Length: 447)

Name: NF14504_low_9
Description: NF14504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14504_low_9
NF14504_low_9
[»] chr1 (20 HSPs)
chr1 (3-224)||(13515985-13516210)
chr1 (42-223)||(50001562-50001746)
chr1 (32-223)||(29763411-29763605)
chr1 (32-173)||(21042343-21042483)
chr1 (6-183)||(52939854-52940035)
chr1 (32-142)||(47191574-47191683)
chr1 (32-224)||(20959105-20959295)
chr1 (40-188)||(20134202-20134352)
chr1 (60-188)||(21684003-21684131)
chr1 (32-153)||(16092878-16092998)
chr1 (32-183)||(22125272-22125420)
chr1 (32-147)||(22777436-22777553)
chr1 (32-224)||(14801463-14801659)
chr1 (32-224)||(14810337-14810533)
chr1 (32-86)||(48521486-48521540)
chr1 (32-188)||(16382108-16382264)
chr1 (109-224)||(20271623-20271738)
chr1 (66-191)||(13527514-13527640)
chr1 (35-224)||(45755600-45755791)
chr1 (32-74)||(22145601-22145645)
[»] scaffold0125 (1 HSPs)
scaffold0125 (4-224)||(838-1061)
[»] chr3 (32 HSPs)
chr3 (3-224)||(15080502-15080723)
chr3 (71-223)||(16980031-16980185)
chr3 (4-188)||(11202263-11202448)
chr3 (32-224)||(24152172-24152364)
chr3 (4-183)||(9578587-9578767)
chr3 (6-188)||(22652817-22653002)
chr3 (32-150)||(21838447-21838564)
chr3 (32-188)||(32402003-32402160)
chr3 (32-224)||(15266302-15266493)
chr3 (32-173)||(8927394-8927534)
chr3 (40-183)||(320239-320383)
chr3 (32-191)||(37641314-37641477)
chr3 (108-183)||(37428759-37428834)
chr3 (95-185)||(14604997-14605087)
chr3 (32-188)||(15207909-15208053)
chr3 (135-224)||(3263741-3263830)
chr3 (134-224)||(6820388-6820477)
chr3 (32-224)||(13521990-13522178)
chr3 (135-215)||(49968650-49968729)
chr3 (40-91)||(12386411-12386462)
chr3 (107-153)||(23317788-23317834)
chr3 (139-224)||(23392557-23392642)
chr3 (34-205)||(11885357-11885530)
chr3 (112-188)||(15246953-15247029)
chr3 (134-224)||(3393535-3393624)
chr3 (107-224)||(13919925-13920045)
chr3 (135-206)||(6804685-6804757)
chr3 (40-91)||(43928087-43928139)
chr3 (107-224)||(12386507-12386627)
chr3 (32-65)||(37428691-37428724)
chr3 (188-224)||(13100552-13100588)
chr3 (129-189)||(14502246-14502305)
[»] chr6 (28 HSPs)
chr6 (3-224)||(15684422-15684647)
chr6 (32-223)||(15900433-15900627)
chr6 (32-223)||(15173232-15173426)
chr6 (4-188)||(18707223-18707410)
chr6 (95-223)||(23664836-23664965)
chr6 (4-148)||(18697472-18697619)
chr6 (35-188)||(18454205-18454357)
chr6 (32-183)||(20137647-20137799)
chr6 (32-183)||(22195070-22195222)
chr6 (32-224)||(17228852-17229042)
chr6 (32-188)||(23527122-23527278)
chr6 (128-224)||(15816437-15816533)
chr6 (32-188)||(22792248-22792409)
chr6 (55-224)||(18895264-18895433)
chr6 (33-224)||(23077697-23077890)
chr6 (81-153)||(19363492-19363563)
chr6 (4-86)||(23539872-23539957)
chr6 (135-224)||(20183906-20183995)
chr6 (135-224)||(22151996-22152085)
chr6 (134-224)||(23076233-23076322)
chr6 (135-224)||(611986-612074)
chr6 (33-108)||(35012135-35012210)
chr6 (135-224)||(19401276-19401364)
chr6 (107-147)||(20225016-20225056)
chr6 (107-147)||(22119000-22119040)
chr6 (107-224)||(33444118-33444238)
chr6 (135-188)||(18259000-18259053)
chr6 (33-187)||(22375621-22375775)
[»] chr7 (33 HSPs)
chr7 (4-224)||(37793179-37793402)
chr7 (32-223)||(16549784-16549978)
chr7 (32-223)||(16615684-16615878)
chr7 (32-224)||(14980457-14980648)
chr7 (32-224)||(15409933-15410124)
chr7 (4-215)||(11091688-11091903)
chr7 (32-223)||(29051960-29052155)
chr7 (4-215)||(11085562-11085777)
chr7 (32-224)||(38519757-38519948)
chr7 (32-224)||(129728-129919)
chr7 (71-204)||(17052561-17052694)
chr7 (32-224)||(11767876-11768068)
chr7 (32-224)||(14274406-14274598)
chr7 (32-153)||(42462947-42463067)
chr7 (32-183)||(16997166-16997314)
chr7 (55-181)||(9032386-9032512)
chr7 (4-224)||(18455376-18455600)
chr7 (40-183)||(17016423-17016569)
chr7 (32-188)||(11524632-11524778)
chr7 (32-191)||(19485783-19485946)
chr7 (63-146)||(13848778-13848861)
chr7 (33-108)||(9176738-9176813)
chr7 (40-153)||(16092469-16092584)
chr7 (109-224)||(12558077-12558193)
chr7 (135-188)||(15203357-15203410)
chr7 (135-205)||(23461419-23461489)
chr7 (135-204)||(8135037-8135106)
chr7 (32-86)||(9724726-9724779)
chr7 (71-163)||(8249077-8249170)
chr7 (106-205)||(40554314-40554413)
chr7 (131-163)||(15095479-15095511)
chr7 (176-224)||(15117592-15117639)
chr7 (138-224)||(18008120-18008206)
[»] chr2 (27 HSPs)
chr2 (4-224)||(23079661-23079884)
chr2 (32-224)||(27473530-27473714)
chr2 (32-223)||(18357760-18357954)
chr2 (32-223)||(21080748-21080942)
chr2 (32-223)||(21915703-21915897)
chr2 (63-223)||(25184300-25184462)
chr2 (32-223)||(357960-358155)
chr2 (63-224)||(22502105-22502268)
chr2 (63-224)||(22510039-22510202)
chr2 (63-223)||(12626182-12626344)
chr2 (81-188)||(27845684-27845792)
chr2 (32-188)||(43946337-43946497)
chr2 (32-188)||(18545966-18546122)
chr2 (134-216)||(22704201-22704283)
chr2 (135-224)||(24833807-24833895)
chr2 (107-224)||(26393476-26393594)
chr2 (99-224)||(21115828-21115953)
chr2 (32-91)||(39827115-39827173)
chr2 (35-215)||(24792553-24792731)
chr2 (102-196)||(3539988-3540081)
chr2 (135-224)||(14694507-14694596)
chr2 (135-224)||(25046300-25046389)
chr2 (135-200)||(22260229-22260294)
chr2 (118-215)||(24688246-24688342)
chr2 (135-196)||(44072742-44072803)
chr2 (176-224)||(22458467-22458514)
chr2 (118-194)||(24684991-24685066)
[»] scaffold0338 (3 HSPs)
scaffold0338 (32-224)||(310-502)
scaffold0338 (32-188)||(2668-2823)
scaffold0338 (135-224)||(10545-10633)
[»] chr8 (35 HSPs)
chr8 (32-224)||(17459995-17460186)
chr8 (32-223)||(23479161-23479356)
chr8 (32-223)||(19880901-19881095)
chr8 (60-224)||(19807173-19807337)
chr8 (32-223)||(26454787-26454981)
chr8 (34-223)||(17158742-17158934)
chr8 (32-224)||(43113098-43113288)
chr8 (4-224)||(22184082-22184305)
chr8 (32-183)||(17084898-17085048)
chr8 (32-224)||(22245025-22245215)
chr8 (4-215)||(14102149-14102362)
chr8 (32-224)||(22252104-22252293)
chr8 (32-188)||(19928582-19928734)
chr8 (4-224)||(20501017-20501240)
chr8 (49-224)||(22432815-22432991)
chr8 (32-147)||(16198915-16199032)
chr8 (32-224)||(22526483-22526678)
chr8 (32-188)||(28398561-28398715)
chr8 (82-188)||(22342033-22342139)
chr8 (40-153)||(40491886-40491999)
chr8 (82-224)||(22996840-22996982)
chr8 (81-224)||(22984690-22984833)
chr8 (33-188)||(19153833-19153990)
chr8 (107-224)||(16800510-16800628)
chr8 (32-91)||(17085224-17085282)
chr8 (106-224)||(2417799-2417918)
chr8 (40-224)||(20532319-20532506)
chr8 (40-224)||(22423268-22423456)
chr8 (135-186)||(17272451-17272502)
chr8 (102-215)||(45469009-45469120)
chr8 (135-224)||(13660639-13660727)
chr8 (135-224)||(13719282-13719370)
chr8 (32-85)||(37516682-37516734)
chr8 (135-224)||(17218879-17218969)
chr8 (55-145)||(17438523-17438615)
[»] chr5 (26 HSPs)
chr5 (33-223)||(17011808-17012001)
chr5 (32-223)||(31457039-31457234)
chr5 (63-223)||(17876305-17876467)
chr5 (32-188)||(6766832-6766987)
chr5 (32-224)||(23476479-23476670)
chr5 (32-188)||(25573400-25573555)
chr5 (4-188)||(266080-266267)
chr5 (32-148)||(29448919-29449036)
chr5 (32-125)||(23470767-23470859)
chr5 (138-223)||(33898448-33898534)
chr5 (62-224)||(40726790-40726953)
chr5 (32-188)||(15797414-15797571)
chr5 (63-224)||(20572870-20573031)
chr5 (135-224)||(10818037-10818126)
chr5 (135-224)||(22776808-22776897)
chr5 (81-188)||(21344270-21344378)
chr5 (35-224)||(19616237-19616424)
chr5 (95-188)||(21327240-21327334)
chr5 (135-224)||(21405412-21405500)
chr5 (135-224)||(41860380-41860468)
chr5 (35-224)||(25249609-25249800)
chr5 (35-224)||(25313393-25313584)
chr5 (107-224)||(26739578-26739696)
chr5 (108-188)||(21870617-21870698)
chr5 (108-188)||(21874897-21874978)
chr5 (104-224)||(20468969-20469087)
[»] scaffold0138 (1 HSPs)
scaffold0138 (32-223)||(21176-21370)
[»] chr4 (25 HSPs)
chr4 (32-223)||(40620611-40620805)
chr4 (32-223)||(15009042-15009236)
chr4 (4-188)||(12841606-12841793)
chr4 (4-183)||(14851852-14852034)
chr4 (4-183)||(32305980-32306162)
chr4 (47-224)||(26049406-26049582)
chr4 (4-224)||(15792736-15792959)
chr4 (32-188)||(14651700-14651852)
chr4 (32-183)||(26790328-26790482)
chr4 (107-224)||(13847356-13847464)
chr4 (40-224)||(14826092-14826278)
chr4 (32-183)||(21103939-21104086)
chr4 (32-224)||(40909833-40910022)
chr4 (40-224)||(17334279-17334465)
chr4 (61-191)||(22354765-22354896)
chr4 (36-144)||(16044035-16044143)
chr4 (33-224)||(19739815-19740004)
chr4 (33-215)||(27996868-27997049)
chr4 (32-86)||(35811300-35811353)
chr4 (135-205)||(43251034-43251105)
chr4 (135-215)||(6512816-6512895)
chr4 (178-223)||(14186628-14186673)
chr4 (135-224)||(21368-21457)
chr4 (135-224)||(51993744-51993833)
chr4 (32-86)||(13590993-13591046)
[»] scaffold0156 (1 HSPs)
scaffold0156 (32-223)||(16683-16878)
[»] scaffold0034 (1 HSPs)
scaffold0034 (32-223)||(28995-29189)
[»] scaffold0462 (1 HSPs)
scaffold0462 (32-223)||(11302-11496)
[»] scaffold0083 (1 HSPs)
scaffold0083 (32-223)||(2016-2209)
[»] scaffold0632 (1 HSPs)
scaffold0632 (32-223)||(1244-1440)
[»] scaffold0436 (1 HSPs)
scaffold0436 (63-223)||(9071-9233)
[»] scaffold0046 (3 HSPs)
scaffold0046 (32-223)||(21556-21750)
scaffold0046 (107-224)||(25055-25173)
scaffold0046 (107-180)||(15912-15986)
[»] scaffold0169 (1 HSPs)
scaffold0169 (4-188)||(28519-28706)
[»] scaffold0077 (1 HSPs)
scaffold0077 (6-224)||(54599-54820)
[»] scaffold0290 (1 HSPs)
scaffold0290 (4-188)||(1114-1301)
[»] scaffold0072 (1 HSPs)
scaffold0072 (108-224)||(62107-62225)
[»] scaffold0956 (1 HSPs)
scaffold0956 (32-223)||(1156-1339)
[»] scaffold0016 (1 HSPs)
scaffold0016 (4-188)||(118578-118765)
[»] scaffold0347 (1 HSPs)
scaffold0347 (32-224)||(9875-10066)
[»] scaffold0010 (2 HSPs)
scaffold0010 (32-224)||(1632-1822)
scaffold0010 (32-224)||(7284-7474)
[»] scaffold0012 (1 HSPs)
scaffold0012 (32-224)||(220122-220313)
[»] scaffold0058 (1 HSPs)
scaffold0058 (98-221)||(6471-6595)
[»] scaffold0023 (1 HSPs)
scaffold0023 (108-224)||(106159-106277)
[»] scaffold0001 (3 HSPs)
scaffold0001 (4-224)||(447455-447677)
scaffold0001 (32-224)||(498396-498586)
scaffold0001 (33-224)||(499135-499324)
[»] scaffold0480 (1 HSPs)
scaffold0480 (32-183)||(10411-10562)
[»] scaffold0126 (1 HSPs)
scaffold0126 (107-224)||(7190-7307)
[»] scaffold0282 (1 HSPs)
scaffold0282 (32-224)||(17122-17313)
[»] scaffold0108 (1 HSPs)
scaffold0108 (32-188)||(4104-4259)
[»] scaffold0040 (2 HSPs)
scaffold0040 (33-151)||(23191-23309)
scaffold0040 (53-224)||(14336-14507)
[»] scaffold0009 (1 HSPs)
scaffold0009 (63-224)||(191597-191758)
[»] scaffold0054 (1 HSPs)
scaffold0054 (32-183)||(74852-75004)
[»] scaffold0877 (1 HSPs)
scaffold0877 (55-188)||(1829-1964)
[»] scaffold0914 (1 HSPs)
scaffold0914 (4-224)||(2686-2908)
[»] scaffold0005 (2 HSPs)
scaffold0005 (32-188)||(165440-165592)
scaffold0005 (40-224)||(13431-13617)
[»] scaffold0417 (1 HSPs)
scaffold0417 (32-224)||(602-799)
[»] scaffold0011 (1 HSPs)
scaffold0011 (32-173)||(37122-37261)
[»] scaffold0359 (1 HSPs)
scaffold0359 (32-183)||(16409-16556)
[»] scaffold1835 (1 HSPs)
scaffold1835 (4-183)||(249-432)
[»] scaffold0047 (1 HSPs)
scaffold0047 (40-224)||(22902-23088)
[»] scaffold0256 (1 HSPs)
scaffold0256 (34-224)||(1631-1820)
[»] scaffold0180 (2 HSPs)
scaffold0180 (40-224)||(33452-33639)
scaffold0180 (42-205)||(31172-31338)
[»] scaffold0500 (1 HSPs)
scaffold0500 (32-224)||(8471-8659)
[»] scaffold0014 (2 HSPs)
scaffold0014 (63-224)||(203318-203479)
scaffold0014 (100-224)||(79455-79579)
[»] scaffold0439 (1 HSPs)
scaffold0439 (32-224)||(12470-12658)
[»] scaffold1419 (1 HSPs)
scaffold1419 (32-153)||(1029-1150)
[»] scaffold0357 (1 HSPs)
scaffold0357 (33-188)||(4939-5095)
[»] scaffold0081 (1 HSPs)
scaffold0081 (33-224)||(3789-3982)
[»] scaffold0106 (1 HSPs)
scaffold0106 (107-188)||(18671-18753)
[»] scaffold0750 (1 HSPs)
scaffold0750 (95-183)||(4680-4769)
[»] scaffold0708 (1 HSPs)
scaffold0708 (107-224)||(1384-1502)
[»] scaffold0686 (2 HSPs)
scaffold0686 (33-224)||(2453-2648)
scaffold0686 (33-188)||(2254-2413)
[»] scaffold0026 (1 HSPs)
scaffold0026 (135-205)||(22364-22435)
[»] scaffold0151 (1 HSPs)
scaffold0151 (35-188)||(31188-31344)
[»] scaffold0065 (1 HSPs)
scaffold0065 (134-224)||(56120-56209)
[»] scaffold0006 (2 HSPs)
scaffold0006 (33-145)||(98021-98135)
scaffold0006 (33-145)||(107299-107413)
[»] scaffold0123 (1 HSPs)
scaffold0123 (135-215)||(7459-7538)
[»] scaffold0007 (1 HSPs)
scaffold0007 (40-215)||(158603-158779)
[»] scaffold0004 (1 HSPs)
scaffold0004 (104-224)||(111513-111631)
[»] scaffold0037 (1 HSPs)
scaffold0037 (4-64)||(81609-81673)
[»] scaffold0396 (1 HSPs)
scaffold0396 (127-224)||(3553-3650)
[»] scaffold0112 (1 HSPs)
scaffold0112 (42-92)||(23026-23075)
[»] scaffold0848 (1 HSPs)
scaffold0848 (135-224)||(1803-1891)
[»] scaffold0589 (1 HSPs)
scaffold0589 (35-205)||(4465-4638)
[»] scaffold0379 (1 HSPs)
scaffold0379 (135-215)||(3687-3766)
[»] scaffold0042 (1 HSPs)
scaffold0042 (134-224)||(29569-29659)
[»] scaffold0192 (1 HSPs)
scaffold0192 (108-188)||(10936-11017)
[»] scaffold0075 (1 HSPs)
scaffold0075 (135-224)||(61067-61156)
[»] scaffold0434 (1 HSPs)
scaffold0434 (33-87)||(5900-5954)
[»] scaffold0321 (1 HSPs)
scaffold0321 (135-224)||(126-215)
[»] scaffold0261 (1 HSPs)
scaffold0261 (118-188)||(17304-17373)
[»] scaffold0056 (1 HSPs)
scaffold0056 (135-224)||(67303-67391)
[»] scaffold0074 (1 HSPs)
scaffold0074 (128-224)||(9233-9329)


Alignment Details
Target: chr1 (Bit Score: 181; Significance: 1e-97; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 3 - 224
Target Start/End: Original strand, 13515985 - 13516210
Alignment:
Q  3 ccccttaccttaagaaaatcggtcggtagctct----tggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattct 98  Q
    ||||||||||||||||||||| |||| ||||||    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13515985 ccccttaccttaagaaaatcgatcggcagctctctcttggttcttctctcatcttgttctcccttcttccccaaaactggttgtacgtgaaaataattct 13516084  T
Q  99 aaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  13516085 aaacctagtttctcctatttatctctttccatctattttatcttatttccactttaaccactaaattccctaaatcctcaaaacagccccacaacttaat 13516184  T
Q  199 tttatttctattttcaagacttattc 224  Q
     |||||||||||||||||||||||||    
T  13516185 cttatttctattttcaagacttattc 13516210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 50001562 - 50001746
Alignment:
Q  42 ttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatctattttat 139  Q
    |||||| |||||||| || || ||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  50001562 ttctcttctcttgttttctcccttttctccaaaactggttgtacattaaaaataattctaaacctagtttctcctatttatctcttcccatctattttat 50001661  T
Q  140 cttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  50001662 cttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 50001746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 32 - 223
Target Start/End: Complemental strand, 29763605 - 29763411
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    |||||||||||  ||| |||||||| || || ||||| ||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||  |     
T  29763605 ctcttggttctcatcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattctaaatctattttctcctatttatctcttctct 29763506  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  29763505 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaatagccccacaatcttaatcttatttctattttcaagacttatt 29763411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 32 - 173
Target Start/End: Complemental strand, 21042483 - 21042343
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| || ||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  21042483 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactgattatacgtgaaaaacattctaaacctattttctcctatttatctctttccatc 21042385  T
Q  132 tattttatcttatttccactttatccactaaattctctaaat 173  Q
    ||||||||||||||||| ||||  |||| ||| |||||||||    
T  21042384 tattttatcttatttcctcttttcccacaaaactctctaaat 21042343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 6 - 183
Target Start/End: Complemental strand, 52940035 - 52939854
Alignment:
Q  6 cttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaa 101  Q
    |||||||||||||||||| || | ||    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||   |||||||    
T  52940035 cttaccttaagaaaatcgatcagcagctctctcttggttcttctctcctcttgttctccc-ttttctccaaaactggttgtacgtgaaaacttttctaaa 52939937  T
Q  102 cctagtttctcctatttatctctttccatctattttatcttatttccac-tttatccactaaattctctaaatcctcaaaaca 183  Q
    |||| |||||||||||||||| || |||||||||||||||||||||| | |||  |||| ||| ||||||||| |||||||||    
T  52939936 cctattttctcctatttatcttttcccatctattttatcttatttcctcattttcccacaaaactctctaaattctcaaaaca 52939854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 32 - 142
Target Start/End: Original strand, 47191574 - 47191683
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  47191574 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactcgttgtacgtgaaaataattctaaacctattttatcctatttatctcttcccatc 47191672  T
Q  132 tattttatctt 142  Q
    |||||||||||    
T  47191673 tattttatctt 47191683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 20959105 - 20959295
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||| |||||||||||||||||||||| | |||||| || ||||| ||||||||||||  ||||||| ||||||||||||||||||| |||||    
T  20959105 ctcttggttct-ctctcctcttgttctccctttt-ctccaaaattgattgtatgtgaaaataattacaaacctattttctcctatttatctcttcccatc 20959202  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||||||| | ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  20959203 tattttatcttattttctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 20959295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 40 - 188
Target Start/End: Complemental strand, 20134352 - 20134202
Alignment:
Q  40 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatttatctctttccatctatttt 137  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||  || |||  ||||||||||||||||||| |||||||||||    
T  20134352 tcttctctcctcttgttctccctttttctccaaaactggttgtacgtgaaaactattct-gacttaggttttctcctatttatctcttcccatctatttt 20134254  T
Q  138 atcttatttccactttat-ccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||| |||| | |||| ||| ||||||||| ||||||||| ||||    
T  20134253 atcttatttcctctttttcccacaaaactctctaaattctcaaaacaacccc 20134202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 60 - 188
Target Start/End: Original strand, 21684003 - 21684131
Alignment:
Q  60 cctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttat-cca 158  Q
    |||||||| |||||||||   |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||| | |||    
T  21684003 cctttttctccaaaactgaacgtacgtgaaaataattctaa-cctattttctcctatttatctctttccatctattttatcttatttcctctttttccca 21684101  T
Q  159 ctaaattctctaaatcctcaaaacagcccc 188  Q
    | ||| ||||||||| ||||||||| ||||    
T  21684102 caaaactctctaaattctcaaaacaacccc 21684131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 32 - 153
Target Start/End: Complemental strand, 16092998 - 16092878
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||||||| ||| ||||||||||||  ||||||| || |||||||| ||||   |||||| |||| |||||||||||||||||||||||||    
T  16092998 ctcttggttcttctctcttctagttctcccttttctcccaaaagtgattgtacgtaaaaacgtttctaa-cctattttctcctatttatctctttccatc 16092900  T
Q  132 tattttatcttatttccacttt 153  Q
    ||||||||||||||||| ||||    
T  16092899 tattttatcttatttcctcttt 16092878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 22125272 - 22125420
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||| ||||  ||||||||||||||||||||| | |||||||||||||||| |||||||  | |||||| ||  |||||||||||||||| | |||||    
T  22125272 ctcttgattctcttctcctcttgttctccctttt-ctccaaaactggttgtac-tgaaaattgt-ctaaacttatgttctcctatttatctcctcccatc 22125368  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 183  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| |||||||||    
T  22125369 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaaca 22125420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 22777436 - 22777553
Alignment:
Q  32 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttc 127  Q
    |||||||||||  ||||||||||    ||||||||||| | |||||||||   |||||||||||||||||||| |||| |||||||||||||||||||||    
T  22777436 ctcttggttctcttctcctcttgacttttctccctttt-ctccaaaactgaacgtacgtgaaaataattctaa-cctattttctcctatttatctctttc 22777533  T
Q  128 catctattttatcttatttc 147  Q
    ||||||||||||||||||||    
T  22777534 catctattttatcttatttc 22777553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 14801463 - 14801659
Alignment:
Q  32 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttc 127  Q
    ||||||||||||| || ||||||    |||||||||||   ||||||||| | |||||||||||   |||||||| || ||||||||||||||||||| |    
T  14801463 ctcttggttcttcccttctcttgacttttctcccttttcttccaaaactgatcgtacgtgaaaaactttctaaacttattttctcctatttatctcttcc 14801562  T
Q  128 catctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    |||||||||||||| |||||| ||||  |||| ||| ||||||||  ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  14801563 catctattttatctgatttcctcttttcccacaaaactctctaaaatctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 14801659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 14810337 - 14810533
Alignment:
Q  32 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttc 127  Q
    ||||||||||||| || ||||||    |||||||||||   ||||||||| | |||||||||||   |||||||| || ||||||||||||||||||| |    
T  14810337 ctcttggttcttcccttctcttgacttttctcccttttcttccaaaactgatcgtacgtgaaaaactttctaaacttattttctcctatttatctcttcc 14810436  T
Q  128 catctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    |||||||||||||| |||||| ||||  |||| ||| ||||||||  ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  14810437 catctattttatctgatttcctcttttcccacaaaactctctaaaatctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 14810533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 48521486 - 48521540
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgt 86  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  48521486 ctcttggttcttctctccacttgttctccctttttctccaaaactggttgtacgt 48521540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 188
Target Start/End: Original strand, 16382108 - 16382264
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctct-ttcca 129  Q
    ||||||||| |||||| |||||||||||||||||  || |||| || |||||||| |||| |||||| |||||| || |||||||||||| | |  || |    
T  16382108 ctcttggttattctcttctcttgttctcccttttctccaaaaagtgattgtacgtaaaaacaattct-aacctaattctctcctatttatatatcctcta 16382206  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    |||||| ||||||| |||| ||||  |||| ||| ||||||||| | ||||||||||||    
T  16382207 tctattctatctta-ttcctcttttcccacaaaactctctaaattcacaaaacagcccc 16382264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 224
Target Start/End: Complemental strand, 20271738 - 20271623
Alignment:
Q  109 tctcctatttatctctt-tccatctattttatcttatttccactttatccactaaat-tctctaaatcctcaaaacagccccacaacttaattttatttc 206  Q
    |||||||||||| |||| || ||||||||||||||||| || |||| ||| | |||  ||||||||  |||||||||||||||| ||||||| ||| |||    
T  20271738 tctcctatttatatcttctctatctattttatcttatt-cctctttttcccccaaaactctctaaaatctcaaaacagccccaccacttaatctta-ttc 20271641  T
Q  207 tattttcaagacttattc 224  Q
    |||| |||||||||||||    
T  20271640 tattatcaagacttattc 20271623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 13527640 - 13527514
Alignment:
Q  66 tccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctct-ttccatctattttatcttatttccactttatccactaaat 164  Q
    |||| ||||||| || ||||||||||   ||||||||||||||||  || | |||||||  || ||||| |||||||||||||| || | |||||||||     
T  13527640 tcccaaaaactgtttttacgtgaaaacttttctaaacctagtttcctctttatatctctcctcaatctactttatcttatttcctctatttccactaaac 13527541  T
Q  165 tc-tctaaatcctcaaaacagccccaca 191  Q
    || ||||||| | |||||||||||||||    
T  13527540 tcttctaaattc-caaaacagccccaca 13527514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 224
Target Start/End: Original strand, 45755600 - 45755791
Alignment:
Q  35 ttggttcttctctcctcttgtt--ctccctttttccccaaaa-ctggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||| |||||| ||||||||  ||||||||||| |||||| || ||| ||||||||||  ||| | | | | ||||||||||||||| || | | | |    
T  45755600 ttggttattctcttctcttgttttctccctttttctccaaaagcttgttttacgtgaaaactattatgacctttgtttctcctatttatttcct-caacc 45755698  T
Q  132 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 224  Q
      |||||||||||||||||||  ||||||||| || | |||||  ||||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  45755699 ctttttatcttatttccacttattccactaaactcttataaat-ttcaaaacagcccccacaacttaatcttattt-tattttcaaatcttattc 45755791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 22145645 - 22145601
Alignment:
Q  32 ctcttggttcttctctcctcttg--ttctccctttttccccaaaa 74  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||    
T  22145645 ctcttggttcttctcttctcttgttttctccctttttccccaaaa 22145601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 164; Significance: 2e-87; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 4 - 224
Target Start/End: Complemental strand, 1061 - 838
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || | ||    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||     
T  1061 cccttaccttaagaaaatcgatctgcagctctctcttggttcttctctcctcttgttctccc-ttttctccaaaactggttgtacgtgaaaataattctc 963  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaatt 199  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  962 aacctagtttctcctatttatctcttcccatctattttatcttattttcacttaatccactaaattctctaaatcctcaaaacagccccacaacttaatc 863  T
Q  200 ttatttctattttcaagacttattc 224  Q
    |||||||||||||||||||||||||    
T  862 ttatttctattttcaagacttattc 838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 164; Significance: 2e-87; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 3 - 224
Target Start/End: Original strand, 15080502 - 15080723
Alignment:
Q  3 ccccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattct 98  Q
    ||||||||||||||||||||| || | ||    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  15080502 ccccttaccttaagaaaatcgatctgcagttctctcttggttcttctctcctcttgttctccctttttccctaaaactggttgtaggtgaaaataattct 15080601  T
Q  99 aaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat 198  Q
    |||    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15080602 aaa----gtttctcctatttctctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat 15080697  T
Q  199 tttatttctattttcaagacttattc 224  Q
     |||||||||||||||||||||||||    
T  15080698 cttatttctattttcaagacttattc 15080723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 71 - 223
Target Start/End: Original strand, 16980031 - 16980185
Alignment:
Q  71 aaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctct 169  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||| |||||    
T  16980031 aaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttcccttctattttatcttatttccacttaatccactaaactctct 16980130  T
Q  170 aaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  16980131 aaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 16980185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 4 - 188
Target Start/End: Original strand, 11202263 - 11202448
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtagctct--tggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaa 101  Q
    |||||||||||||||||||| || | ||||||  ||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  11202263 cccttaccttaagaaaatcgatcagcagctctcttggttcttctctccttttgttctccctttt-ctccaaaactggttgtacgtgaaaataattttaaa 11202361  T
Q  102 cctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    |||||||||||| ||||||| ||| |||||||||||||||||||||| ||   ||||| ||| ||||||||| | ||||||||||||    
T  11202362 cctagtttctcccatttatcacttcccatctattttatcttatttcctctaattccacaaaactctctaaattcacaaaacagcccc 11202448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 24152364 - 24152172
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |    
T  24152364 ctcttggttcttctctcctcttgttctccctttt-ctccaaatctggttgtacgtgaaaataattctaaacctagtttctcctatttatctc-ttcaacc 24152267  T
Q  132 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaactt-aattttatttctattttcaagacttattc 224  Q
       ||||||||||||||| ||  ||||||||| || |||||||  ||||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  24152266 ctctttatcttatttccatttattccactaaactcttctaaat-ttcaaaacagcccccacaacttaaatcttatttctattttcaagacttattc 24152172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 9578587 - 9578767
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag--ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaa 101  Q
    |||||||||||||||||||| ||   ||  |||||||||||  ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  9578587 cccttaccttaagaaaatcgatcaacagctctcttggttctcttctcctcttgttctccc-ttttctccaaaactggttgtacgtgaaaataattttaaa 9578685  T
Q  102 cctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 183  Q
    |||  ||||||||||||||||||| |||| ||||||||||||||||| ||||  |||| ||| ||||||||| |||||||||    
T  9578686 cctcttttctcctatttatctcttcccatatattttatcttatttcctcttttcccacaaaactctctaaattctcaaaaca 9578767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 6 - 188
Target Start/End: Original strand, 22652817 - 22653002
Alignment:
Q  6 cttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaa 101  Q
    |||||||||||||||||| || | ||    |||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||| | ||||    
T  22652817 cttaccttaagaaaatcgatcagcagctctctcttggttcttctctcctcttgttctccc-ttttctccaaaactggttgtacatgaaaataactgtaaa 22652915  T
Q  102 cctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||  |   ||||| ||| ||||||||| | ||||||||||||    
T  22652916 cctagtttctcctatttatcacttcccatctattttatcttatttcctttaattccacaaaactctctaaattcacaaaacagcccc 22653002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 32 - 150
Target Start/End: Original strand, 21838447 - 21838564
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||| ||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||| || | |||||    
T  21838447 ctcttggttcttccctcttctcgttctccctttt-ctccaaaactggttgtacgtgaaaataattctaaacctagtttttcctatttatttcctcccatc 21838545  T
Q  132 tattttatcttatttccac 150  Q
    |||||||||||||||||||    
T  21838546 tattttatcttatttccac 21838564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 32 - 188
Target Start/End: Complemental strand, 32402160 - 32402003
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||||||||||||||||||||||||  || ||||||| |||||||||||||   ||||||||||| | ||||||||||||||||| | |||    
T  32402160 ctcttggttcttctctcctcttgttctcccttttctccaaaaactgattgtacgtgaaaacttttctaaacctattctctcctatttatctcttcctatc 32402061  T
Q  132 tattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagcccc 188  Q
    | ||||||||||||||| |||| | |||| ||| ||||||||| ||||||||| ||||    
T  32402060 ttttttatcttatttcctctttttcccacaaaactctctaaattctcaaaacaacccc 32402003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 15266302 - 15266493
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagttt-ctcctatttatctctttccat 130  Q
    |||| ||||||  ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||| ||||    
T  15266302 ctctgggttctcttctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaataattctaa-cctatttttctcctatttatctcttcccat 15266399  T
Q  131 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    |||| ||||||||||||| ||||  |||| ||| ||||||||| | ||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  15266400 ctatcttatcttatttcctcttttcccacaaaactctctaaattcacaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 15266493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 32 - 173
Target Start/End: Complemental strand, 8927534 - 8927394
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttc-cccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccat 130  Q
    |||||||||||||||||||||||||||||||||||| || |||| || |||||||||||||   |||| |||||| ||||||||||||||||||| ||||    
T  8927534 ctcttggttcttctctcctcttgttctccctttttctccaaaaattgcttgtacgtgaaaa-ctttct-aacctattttctcctatttatctcttcccat 8927437  T
Q  131 ctattttatcttatttccactttatccactaaattctctaaat 173  Q
    |||||||||||||||||| |||| ||| | ||| |||||||||    
T  8927436 ctattttatcttatttcctctttttccccaaaactctctaaat 8927394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 320239 - 320383
Alignment:
Q  40 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaaccta-gtttctcctatttatctctttccatctatttta 138  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||| |||| ||||||  || || |||||||||||||||||||| ||||||||||||    
T  320239 tcttctctcctcttgctctcccttttctcccaaaactggttgtacgtaaaaacaattct-gacttaggtttctcctatttatctcttcccatctatttta 320337  T
Q  139 tcttatttccactttat-ccactaaattctctaaatcctcaaaaca 183  Q
    |||||||||| |||| | |||| ||  ||||||||| |||||||||    
T  320338 tcttatttcctctttttcccacaaatctctctaaattctcaaaaca 320383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 32 - 191
Target Start/End: Complemental strand, 37641477 - 37641314
Alignment:
Q  32 ctcttggttcttctctcctcttgtt--ctccctt-tttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctct-ttc 127  Q
    ||||||||||| |||| ||||||||  ||||||| |||| ||||||||| | || |||||||||||||||||||||||||||||||||||||||||  ||    
T  37641477 ctcttggttctcctcttctcttgttttctcccttgtttctccaaaactgatcgtccgtgaaaataattctaaacctagtttctcctatttatctctcctc 37641378  T
Q  128 catctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccaca 191  Q
     ||| | |||||| ||||||| || | ||||||||| || ||||||| | |||||||||||||||    
T  37641377 aatccactttatcctatttcctctatttccactaaactcttctaaattc-caaaacagccccaca 37641314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 37428759 - 37428834
Alignment:
Q  108 ttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 183  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||||| |||||||||    
T  37428759 ttctcctatttatctcttcccatctattttatcttatttcctctttttccactaaactctctaaattctcaaaaca 37428834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 95 - 185
Target Start/End: Original strand, 14604997 - 14605087
Alignment:
Q  95 ttctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagc 185  Q
    |||||| |||||| ||||||||||||||||| |||||||||||||||||||||| |||   |||||||| | ||||||| |||||||||||    
T  14604997 ttctaaccctagtctctcctatttatctcttcccatctattttatcttatttcctcttatcccactaaactttctaaattctcaaaacagc 14605087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 32 - 188
Target Start/End: Original strand, 15207909 - 15208053
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||  |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||           |||||||||||||| | |||    
T  15207909 ctcttggttctcttctcctcttgttctcc-tttttctccaaaactcgttgtacgtgaaaataattctaa-----------cctatttatctcttcctatc 15207996  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||| ||||||||||||| ||||  |||| ||| ||||||||| | ||||||| ||||    
T  15207997 tatcttatcttatttcctcttttcccacaaaactctctaaattcacaaaacaacccc 15208053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 3263830 - 3263741
Alignment:
Q  135 tttatcttatttccactttatccactaaattct-ctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    |||||||||||||| || | ||||||||| ||| ||||||  | ||||||||||||||||||||| |||||||||||||||||||||||||    
T  3263830 tttatcttatttcctctatttccactaaactcttctaaatttt-aaaacagccccacaacttaatcttatttctattttcaagacttattc 3263741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 224
Target Start/End: Original strand, 6820388 - 6820477
Alignment:
Q  134 ttttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    |||||||||||||||||||  ||| ||| | ||||||||| |||||||||||||||||||||||| |||||| |||||||||  |||||||    
T  6820388 ttttatcttatttccacttattcctctacactctctaaattctcaaaacagccccacaacttaatcttattt-tattttcaaatcttattc 6820477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 13522178 - 13521990
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||||||||| ||||||||| |||||  |||||||| ||||||| | ||||  |||||  ||||| |||||||||||||| ||  || | |    
T  13522178 ctcttggttcttctctccttttgttctcctttttt--ccaaaacttgttgtacataaaaactattct-gacctattttctcctatttatttc-ctcaacc 13522083  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
       ||||||||||||| ||||  ||||||||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  13522082 ctctttatcttatttcaacttattccactaaactctctaaattctcaaaacaacccctcatctcaatctttattt-tattttcaaatcttattc 13521990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 49968729 - 49968650
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaa 215  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||    
T  49968729 tttatcttatttccacttattccactaaagtctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaa 49968650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 12386411 - 12386462
Alignment:
Q  40 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaa 91  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  12386411 tcttctctcctcttgttctcccttttctcccaaaactggttgtacgtaaaaa 12386462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 107 - 153
Target Start/End: Complemental strand, 23317834 - 23317788
Alignment:
Q  107 tttctcctatttatctctttccatctattttatcttatttccacttt 153  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  23317834 tttctcctatttatctcttcccatctattttatcttatttcctcttt 23317788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 23392642 - 23392557
Alignment:
Q  139 tcttatttccactttatccactaaattctctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||  |||||||||  |||||||| |||||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  23392642 tcttatttccacttattccactaaacactctaaattctcaaaacagcccccacaacttaatcttattt-tattttcaaatcttattc 23392557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 34 - 205
Target Start/End: Complemental strand, 11885530 - 11885357
Alignment:
Q  34 cttggttcttctctcctcttg--ttctccctttttccccaaaa-ctggttgtacgtgaaaataattctaaacctagtttctcctatttatctcttt--cc 128  Q
    |||||||||||||| ||||||  ||||||||||||| |||||| || |||  |||||||||  ||||| | | | ||||||||||||||| || ||  ||    
T  11885530 cttggttcttctcttctcttggtttctccctttttctccaaaaacttgtttcacgtgaaaactattctgacctttgtttctcctatttatttccttaacc 11885431  T
Q  129 atctattttatcttatttccactttatccactaaattct-ctaaatcctcaaaacagccccacaacttaattttattt 205  Q
     |||   |||||||||||||||||  ||||||||| ||| |||||| | |||||||||||||| ||||||| ||||||    
T  11885430 ctct---ttatcttatttccacttattccactaaactcttctaaattc-caaaacagccccaccacttaatattattt 11885357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 188
Target Start/End: Original strand, 15246953 - 15247029
Alignment:
Q  112 cctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    |||||||||||||| |||||||| ||||||||||||| ||||  |||| ||| ||||||||| | ||||||| ||||    
T  15246953 cctatttatctcttcccatctatcttatcttatttcctcttttcccacaaaactctctaaattcacaaaacaacccc 15247029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 224
Target Start/End: Complemental strand, 3393624 - 3393535
Alignment:
Q  134 ttttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    |||||||||||||||||||  ||||||||| || ||||||| | |||||||| ||||||||||||| |||||| |||||||||  |||||||    
T  3393624 ttttatcttatttccacttattccactaaactcttctaaattc-caaaacagacccacaacttaatcttattt-tattttcaaatcttattc 3393535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 224
Target Start/End: Original strand, 13919925 - 13920045
Alignment:
Q  107 tttctcctatttat--ctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-ttta 202  Q
    ||||||||||||||  ||||| |||||||||||||||||||||| |||| | |||| ||| ||||||||  |||||||||  ||| ||||| ||| ||||    
T  13919925 tttctcctatttatatctcttcccatctattttatcttatttcctctttttcccacaaaactctctaaaatctcaaaacaatccctcaactcaatattta 13920024  T
Q  203 tttctattttcaagacttattc 224  Q
    ||| |||||||||  |||||||    
T  13920025 ttt-tattttcaaatcttattc 13920045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 6804757 - 6804685
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc-acaacttaattttatttc 206  Q
    ||||||||||| | ||||  ||||||||| |||||||||  |||||||| |||| ||||||||||||||||||    
T  6804757 tttatcttattccaacttattccactaaactctctaaattttcaaaacaacccccacaacttaattttatttc 6804685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 43928087 - 43928139
Alignment:
Q  40 tcttctctcctcttgttctccctttt-tccccaaaactggttgtacgtgaaaa 91  Q
    |||||||||||||||||||||||||| |||| ||||||| |||||||| ||||    
T  43928087 tcttctctcctcttgttctcccttttctcccaaaaactgattgtacgtaaaaa 43928139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 224
Target Start/End: Original strand, 12386507 - 12386627
Alignment:
Q  107 tttctcctatttatctc--tttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-ttta 202  Q
    |||||||||||||| ||  |||| |||||||||||||||||||| |||| | |||| ||| ||||||||| | ||||||| |||| || || ||| ||||    
T  12386507 tttctcctatttatatcactttcaatctattttatcttatttcctctttttcccacaaaactctctaaattcacaaaacaacccctcatctcaatattta 12386606  T
Q  203 tttctattttcaagacttattc 224  Q
    ||| |||||||||  |||||||    
T  12386607 ttt-tattttcaaatcttattc 12386627  T

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Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 37428691 - 37428724
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttt 65  Q
    ||||||||||||||||||||| ||||||||||||    
T  37428691 ctcttggttcttctctcctctagttctccctttt 37428724  T

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Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 224
Target Start/End: Complemental strand, 13100588 - 13100552
Alignment:
Q  188 cacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  13100588 cacaacttaatcttatttctattttcaaggcttattc 13100552  T

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Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 14502246 - 14502305
Alignment:
Q  129 atctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccca 189  Q
    ||||||||||||||||| ||||||   |||||||| ||||||||| | |||||||||||||    
T  14502246 atctattttatcttatt-ccacttataccactaaaatctctaaattcacaaaacagcccca 14502305  T

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Target: chr6 (Bit Score: 161; Significance: 1e-85; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 3 - 224
Target Start/End: Complemental strand, 15684647 - 15684422
Alignment:
Q  3 ccccttaccttaagaaaatcggtcggtagctct----tggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattct 98  Q
    ||||||||||||||||||||| |||| ||||||    ||||| |||||| |||||||||||||||||| |  ||||||||||||| ||||||||||||||    
T  15684647 ccccttaccttaagaaaatcgatcggcagctctctcttggtttttctcttctcttgttctcccttttttcttaaaactggttgtatgtgaaaataattct 15684548  T
Q  99 aaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat 198  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15684547 aaacctaatttcttctatttatctcttcccatctattttatcttatttccacttaatccactaaattctctaaatcctcaaaacagccccacaacttaat 15684448  T
Q  199 tttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||||||||||    
T  15684447 tttatttctattttcaagacttattc 15684422  T

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Target: chr6; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 32 - 223
Target Start/End: Complemental strand, 15900627 - 15900433
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    ||||||||||| |||| |||||||| || || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  15900627 ctcttggttctcctcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccca 15900528  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||  ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  15900527 tctattttatcttatttccacttaatccaccaaactctctaaattttcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 15900433  T

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Target: chr6; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 32 - 223
Target Start/End: Complemental strand, 15173426 - 15173232
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    ||||||||||| |||| |||||||| || || ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| | |||    
T  15173426 ctcttggttctcctcttctcttgttttctcccttttctccaaaacttgttgtacgtgaaaaataattctaaacctagtttctcctattaatctcatccca 15173327  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||||| || ||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  15173326 tctattttatcttatttccacttaattcactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 15173232  T

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Target: chr6; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 4 - 188
Target Start/End: Original strand, 18707223 - 18707410
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || | ||    ||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||    
T  18707223 cccttaccttaagaaaatcgatcagcagctctctcttggttcttctctcctcttgttttccc-ttttctccaaaactggttgtacgtgaaaataattcta 18707321  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||||||||||||||  || ||||||||||||||||||||||  |   ||||| ||| ||||||||| | ||||||||||||    
T  18707322 aacctagtttctcctatttatcatttcccatctattttatcttatttcctttaattccacaaaactctctaaattcacaaaacagcccc 18707410  T

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Target: chr6; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 95 - 223
Target Start/End: Complemental strand, 23664965 - 23664836
Alignment:
Q  95 ttctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-c 193  Q
    ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |    
T  23664965 ttctaaacctagtttctcctatttatctcctctcatctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatc 23664866  T
Q  194 ttaattttatttctattttcaagacttatt 223  Q
    ||||| ||||||||||||||||||||||||    
T  23664865 ttaatcttatttctattttcaagacttatt 23664836  T

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Target: chr6; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 18697472 - 18697619
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || | ||    |||||||||||||||||||| |||||||||  |||| |||||||||||||||||||||||||||||||    
T  18697472 cccttaccttaagaaaatcgatcagcagctctctcttggttcttctctcctcctgttctccc-ctttctccaaaactggttgtacgtgaaaataattcta 18697570  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttcc 148  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  18697571 aacctagtttctcctatttatcacttcccatctattttatcttatttcc 18697619  T

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Target: chr6; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 35 - 188
Target Start/End: Original strand, 18454205 - 18454357
Alignment:
Q  35 ttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctat 134  Q
    |||||||| |||||||||||||||||||||| | ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  18454205 ttggttctcctctcctcttgttctccctttt-ctccaaaacttattgtacgtgaaaataattctaaacctattttctcctatttatctcttcccatctat 18454303  T
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    || ||||||||||| ||||  |||| ||| ||||||||| ||||||||| ||||    
T  18454304 ttaatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccc 18454357  T

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Target: chr6; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 20137647 - 20137799
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagttt-ctcctatttatctctttccat 130  Q
    |||||||||||||||| |||||||||||||||||  || |||| || |||| |||||||| ||||||||||||||||| |||||||||||||||| ||||    
T  20137647 ctcttggttcttctcttctcttgttctcccttttctccaaaaattgattgttcgtgaaaacaattctaaacctagttttctcctatttatctcttcccat 20137746  T
Q  131 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 183  Q
    |||||||||||||||||| |||| ||||| ||| ||||||||| |||||||||    
T  20137747 ctattttatcttatttcctctttttccacaaaactctctaaattctcaaaaca 20137799  T

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Target: chr6; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 22195222 - 22195070
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagttt-ctcctatttatctctttccat 130  Q
    |||||||||||||||| |||||||||||||||||  || |||| || |||| |||||||| ||||||||||||||||| |||||||||||||||| ||||    
T  22195222 ctcttggttcttctcttctcttgttctcccttttctccaaaaattgattgttcgtgaaaacaattctaaacctagttttctcctatttatctcttcccat 22195123  T
Q  131 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 183  Q
    |||||||||||||||||| |||| ||||| ||| ||||||||| |||||||||    
T  22195122 ctattttatcttatttcctctttttccacaaaactctctaaattctcaaaaca 22195070  T

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Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 17229042 - 17228852
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||| ||||||||||||||||||||||||||| | |||||| || |||||||||||||   ||||||||||| ||||||||||||||||||| |||||    
T  17229042 ctcttgattcttctctcctcttgttctccctttt-ctccaaaattgattgtacgtgaaaaactttctaaacctattttctcctatttatctcttcccatc 17228944  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  17228943 tattttatcttatttcctcttt-cccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 17228852  T

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Target: chr6; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 32 - 188
Target Start/End: Complemental strand, 23527278 - 23527122
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||||||||||||||||||||||||  || ||||||| |||||||| |||| |||||||| |||| |||||||||||||||||||||||||    
T  23527278 ctcttggttcttctctcctcttgttctcccttttctccaaaaactgattgtacgtaaaaacaattctaa-cctattttctcctatttatctctttccatc 23527180  T
Q  132 tattttatcttatttcc-actttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    |||||||||||||||||  ||||  |||| ||| ||||||||| | ||||||| ||||    
T  23527179 tattttatcttatttcctcctttccccacaaaactctctaaattcacaaaacaacccc 23527122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 128 - 224
Target Start/End: Complemental strand, 15816533 - 15816437
Alignment:
Q  128 catctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||    
T  15816533 catctattttatcttatttccacttaatccactaaattctctaaatcctcaaaacagccccacaacttaatcttatttctattttcaaatcttattc 15816437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 188
Target Start/End: Complemental strand, 22792409 - 22792248
Alignment:
Q  32 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttc 127  Q
    ||||||||||||| || ||||||    |||||| |||||| ||||||||| | |||||||||||   ||||||||||| |||||| |||||||||||| |    
T  22792409 ctcttggttcttcccttctcttgacttttctccatttttctccaaaactgatcgtacgtgaaaacttttctaaacctattttctcatatttatctcttcc 22792310  T
Q  128 catctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||||||||||||| |||| | |||| ||| ||||||||| ||||||||| ||||    
T  22792309 catctattttatcttatttcctctttttcccacaaaactctctaaattctcaaaacaacccc 22792248  T

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Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 18895433 - 18895264
Alignment:
Q  55 ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccacttta 154  Q
    |||| |||||||| |||||||||  ||||||| ||||   ||||||||||| | |||||||||||||| || ||||||| |||||||||||||| ||||     
T  18895433 ttcttcctttttctccaaaactgaatgtacgttaaaacttttctaaacctattctctcctatttatcttttcccatcta-tttatcttatttcctctttt 18895335  T
Q  155 t-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    | |||| ||| ||||||||| ||||||||| |||| || |||||| ||||||| |||||||||  |||||||    
T  18895334 tcccacaaaaatctctaaattctcaaaacaacccctcatcttaatatttattt-tattttcaaatcttattc 18895264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 33 - 224
Target Start/End: Original strand, 23077697 - 23077890
Alignment:
Q  33 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctct-ttccat 130  Q
    |||||||||||||||| ||||||||||||||||  ||||||| || |||||||||||||   || ||||||||||| || ||||||||| |||  || ||    
T  23077697 tcttggttcttctctcttcttgttctcccttttctcccaaaagtgattgtacgtgaaaacttttttaaacctagttctcacctatttatatctcctctat 23077796  T
Q  131 ctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||| ||||||| |||| |||| | |||| ||| ||||||||| | |||||||||||| || || ||| ||||||| |||||||||  |||||||    
T  23077797 ctattctatctta-ttcctctttttcccacaaaactctctaaattcacaaaacagcccctcatctcaatatttattt-tattttcaaatcttattc 23077890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 19363492 - 19363563
Alignment:
Q  81 gtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccacttt 153  Q
    |||||||||||||||||||| |||| ||  ||||||||||||||| |||||||||||||||||||||| ||||    
T  19363492 gtacgtgaaaataattctaa-cctatttcttcctatttatctcttcccatctattttatcttatttcctcttt 19363563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 23539872 - 23539957
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtagc---tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgt 86  Q
    |||||||||||| |||||||  |||||||   |||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||    
T  23539872 cccttaccttaacaaaatcgaccggtagcctctcttggttctcctcttctcttgttctccctttttctccaaaactgcttgtacgt 23539957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 20183906 - 20183995
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaac-agccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||| | |||||||||||||| |||||| |||||||||  |||||||    
T  20183906 tttatcttatttccacttattccactaaactctctaaattctcaaaacaacccccacaacttaatcttattt-tattttcaaatcttattc 20183995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 22152085 - 22151996
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaac-agccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||| | |||||||||||||| |||||| |||||||||  |||||||    
T  22152085 tttatcttatttccacttattccactaaactctctaaattctcaaaacaacccccacaacttaatcttattt-tattttcaaatcttattc 22151996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 134 - 224
Target Start/End: Complemental strand, 23076322 - 23076233
Alignment:
Q  134 ttttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    |||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  23076322 ttttatcttatttccacttattccactaaactctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaaatcttattc 23076233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 611986 - 612074
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  611986 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaaatcttattc 612074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 35012135 - 35012210
Alignment:
Q  33 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt 108  Q
    |||||||||||||||| ||||||||||||||||  ||||||| || ||||| |||||||   ||||||||||||||    
T  35012135 tcttggttcttctctcttcttgttctcccttttctcccaaaattgattgtatgtgaaaacttttctaaacctagtt 35012210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 19401276 - 19401364
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  ||||||||| |||||||||  ||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  19401276 tttatcttatttccacttattccactaaactctctaaattttcaaaacagcccctcatctcaatattattt-tattttcaaatcttattc 19401364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 20225016 - 20225056
Alignment:
Q  107 tttctcctatttatctctttccatctattttatcttatttc 147  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  20225016 tttctcctatttatctcttcccatctattttatcttatttc 20225056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 22119000 - 22119040
Alignment:
Q  107 tttctcctatttatctctttccatctattttatcttatttc 147  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  22119000 tttctcctatttatctcttcccatctattttatcttatttc 22119040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 224
Target Start/End: Original strand, 33444118 - 33444238
Alignment:
Q  107 tttctcctatttat--ctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-ttta 202  Q
    ||||||||||||||  ||||| |||||||||||||||||||||| |||| | |||| ||| ||||||||  ||||||||| |||| || || ||| ||||    
T  33444118 tttctcctatttatatctcttcccatctattttatcttatttcctctttttcccacaaaactctctaaaatctcaaaacaacccctcatctcaatattta 33444217  T
Q  203 tttctattttcaagacttattc 224  Q
    ||| |||||||||  |||||||    
T  33444218 ttt-tattttcaaatcttattc 33444238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 18259053 - 18259000
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||||||||||  | ||||||| ||||||||| ||||||||||||||    
T  18259053 tttatcttatttccacttatttcactaaactctctaaattctcaaaacagcccc 18259000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 22375775 - 22375621
Alignment:
Q  33 tcttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccat 130  Q
    ||||||||||||||| ||||||||  ||||||||||| |||||||| |||  |||| ||||  ||||| | | || |||||||||||||| ||  ||       
T  22375775 tcttggttcttctcttctcttgttttctccctttttctccaaaacttgtttcacgtaaaaactattctga-cttattttctcctatttat-tccctcagc 22375678  T
Q  131 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccc 187  Q
    |   ||||||||||||||||||  ||||||||| |||||||||  ||||||||||||    
T  22375677 cctctttatcttatttccacttattccactaaactctctaaattgtcaaaacagccc 22375621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 160; Significance: 4e-85; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 4 - 224
Target Start/End: Complemental strand, 37793402 - 37793179
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || | ||    ||||||||||||||||||| ||||||| || ||||| |||||||||||||||||||||||||||||||    
T  37793402 cccttaccttaagaaaatcgatcagcagctctctcttggttcttctctcctattgttcttcc-ttttctccaaaactggttgtacgtgaaaataattcta 37793304  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaatt 199  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  37793303 aacttagtttctcctatttatctcttcccatctattttatcttatttccacttaatccactaaattctctaaatcctcaaaacagccccacaacttaatc 37793204  T
Q  200 ttatttctattttcaagacttattc 224  Q
    |||||||||||||||||||||||||    
T  37793203 ttatttctattttcaagacttattc 37793179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 32 - 223
Target Start/End: Complemental strand, 16549978 - 16549784
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    ||||||||||| |||| |||||||| || || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  16549978 ctcttggttctcctcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccca 16549879  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  16549878 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaagagccccacaatcttaatcttatttctattttcaagacttatt 16549784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 16615684 - 16615878
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    ||||||||||| |||| |||||||| || || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  16615684 ctcttggttctcctcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccca 16615783  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  16615784 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaagagccccacaatcttaatcttatttctattttcaagacttatt 16615878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 14980648 - 14980457
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||||||||| ||| ||| |||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||    
T  14980648 ctcttggttcttctctccttttgctcttcctttttctcaaaaactggttgtacgtgaaaataattccaaacctagtttctcctatttatctattcccatc 14980549  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||| |||||| |||||||||  |||||||    
T  14980548 tattttatcttatttccacttaatccactaaattctctaaatttccaaaacagccccacaacttaatcttattt-tattttcaaatcttattc 14980457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 15410124 - 15409933
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||||||||| ||| ||| |||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||    
T  15410124 ctcttggttcttctctccttttgctcttcctttttctcaaaaactggttgtacgtgaaaataattccaaacctagtttctcctatttatctattcccatc 15410025  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||| |||||| |||||||||  |||||||    
T  15410024 tattttatcttatttccacttaatccactaaattctctaaatttccaaaacagccccacaacttaatcttattt-tattttcaaatcttattc 15409933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 11091688 - 11091903
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || | ||    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  11091688 cccttaccttaagaaaatcgatcagcagctctctcttggttcttctctcctcttgttctccctttttctctaaaactggttgtacgtgaaaataattcta 11091787  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaat 198  Q
    |||||||||| || |||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||| | ||||||||||||||| || |||    
T  11091788 aacctagtttatcatatttatctcttcccatctattttatcttatttccacttaatccactaaattcttctaaattc-caaaacagccccacatctcaat 11091886  T
Q  199 -tttatttctattttcaa 215  Q
     ||||||| |||||||||    
T  11091887 atttattt-tattttcaa 11091903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 32 - 223
Target Start/End: Complemental strand, 29052155 - 29051960
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttcc--ccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcc 128  Q
    ||||| ||||| |||| |||||||| || |||||| |  ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||    
T  29052155 ctcttagttctcctcttctcttgttttctcttttttctcccaaaactggttgtacgtgaaaaataattctaaacctaatttctcctatttatctcttccc 29052056  T
Q  129 atctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  29052055 atctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 29051960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 11085562 - 11085777
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtagc----tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || | |||    ||||||||||||||||||||||||||||||||||| | |||| || |||||||||||||||||||||    
T  11085562 cccttaccttaagaaaatcgatcagcagctctatcttggttcttctctcctcttgttctccctttttctctaaaattgattgtacgtgaaaataattcta 11085661  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaat 198  Q
    |||||||||| || |||||||||||| |||||||||||||||||||||||||| |||||| |||||| ||||||| | ||||||||||||||| || |||    
T  11085662 aacctagtttatcatatttatctcttcccatctattttatcttatttccacttaatccacaaaattcttctaaattc-caaaacagccccacatctcaat 11085760  T
Q  199 -tttatttctattttcaa 215  Q
     ||||||| |||||||||    
T  11085761 atttattt-tattttcaa 11085777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 38519757 - 38519948
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  38519757 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactgattgtacgtgaaaataattctaaacctattttctcctatttatctcttcccatc 38519855  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  38519856 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 38519948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 129919 - 129728
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||| ||||||||||||| ||| |||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  129919 ctcttggttctcctctcctcttgttgtcc-tttttctccaaaactgattgtacgtgaaaataattctaaacctattttctcctatttatctcttcccatc 129821  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  129820 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 129728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 71 - 204
Target Start/End: Complemental strand, 17052694 - 17052561
Alignment:
Q  71 aaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctcta 170  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||  |||  ||||||||||||||||||||||| | |||| ||||||||||||    
T  17052694 aaaactggttgtacgtgaaaataattctatacctagtttctcctatttataacttctcatctattttatcttatttccacctaatcccctaaattctcta 17052595  T
Q  171 aatcctcaaaacagccccacaacttaattttatt 204  Q
    ||| |||||||||||||||||||||||| |||||    
T  17052594 aattctcaaaacagccccacaacttaatcttatt 17052561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 11768068 - 11767876
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||   ||||||||||| ||||||||||||||||||| |||||    
T  11768068 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaacttttctaaacctattttctcctatttatctcttcccatc 11767970  T
Q  132 tattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||||||||| |||| | |||| ||| ||||||||| || |||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  11767969 tattttatcttatttcctctttttcccacaaaactctctaaattcttaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 11767876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 14274406 - 14274598
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| | |    
T  14274406 ctcttggttcttctctcctcttgttctccctttt-ctccaaaattggttgtacgtgaaaataattctaaacctagtttctcctatttatctc-ttcaacc 14274503  T
Q  132 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaa-cttaattttatttctattttcaagacttattc 224  Q
       |||||||||| || ||||  ||||||||  || ||||||| | |||||||| |||||||| |||||| |||||||||||||||||||||||||    
T  14274504 ctctttatcttatgtcgacttattccactaagctcttctaaattc-caaaacagcccccacaatcttaatcttatttctattttcaagacttattc 14274598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 32 - 153
Target Start/End: Original strand, 42462947 - 42463067
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||| |||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||  ||||    
T  42462947 ctcttggttctcctctcctcttgttctccctttt-ctccaaaactgattgtacgtgaaaataattctaaacctattttctcctatttatctcttctcatc 42463045  T
Q  132 tattttatcttatttccacttt 153  Q
    ||||||||||||||||| ||||    
T  42463046 tattttatcttatttcctcttt 42463067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 16997166 - 16997314
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |   ||||||||||| ||||||||||||||||||| |||||    
T  16997166 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacgtgaatacttttctaaacctattttctcctatttatctcttcccatc 16997264  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 183  Q
    ||||||||||||||||| |||  ||||| ||| ||||||||| | |||||||    
T  16997265 tattttatcttatttcctctt--tccacaaaactctctaaattcacaaaaca 16997314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 55 - 181
Target Start/End: Complemental strand, 9032512 - 9032386
Alignment:
Q  55 ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccacttta 154  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||| ||||     
T  9032512 ttctccctttttctccaaaactgatcgtacgtgaaaataattctaaacctattttctcctatttatctctccccatctattttatcttatttcctctttc 9032413  T
Q  155 tccactaaattctctaaatcctcaaaa 181  Q
     |||| ||||||||||||| |||||||    
T  9032412 cccacaaaattctctaaattctcaaaa 9032386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 4 - 224
Target Start/End: Complemental strand, 18455600 - 18455376
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || | ||    |||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||    
T  18455600 cccttaccttaagaaaatcgatccgcagctctctcttggttcttctctcctcttgttctccc-ttttctccaaatctggttgtacgtgaaaataattcta 18455502  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaactt-a 196  Q
    ||||||||| |||||||||||||| ||| | |   |||||| |||||||| ||  | ||||||| || ||||||| | |||||||| ||||||||||| |    
T  18455501 aacctagttcctcctatttatctc-ttcaaccctctttatcatatttccatttatttcactaaactcttctaaattc-caaaacagcccccacaacttaa 18455404  T
Q  197 attttatttctattttcaagacttattc 224  Q
    || |||||| ||||||||||||||||||    
T  18455403 atcttatttatattttcaagacttattc 18455376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 17016569 - 17016423
Alignment:
Q  40 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag---tttctcctatttatctctttccatctattt 136  Q
    ||||||||||||||| |||| ||||||| |||||||||||||||||||||||  | ||| | | |||   ||||||||||||||||||| ||||||||||    
T  17016569 tcttctctcctcttgctctctctttttctccaaaactggttgtacgtgaaaactaatctga-cttaggtttttctcctatttatctcttcccatctattt 17016471  T
Q  137 tatcttatttccactttat-ccactaaattctctaaatcctcaaaaca 183  Q
    |||||||||||| |||| | |||| ||| ||||||||| | |||||||    
T  17016470 tatcttatttcctctttttcccacaaaactctctaaattcgcaaaaca 17016423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 32 - 188
Target Start/End: Complemental strand, 11524778 - 11524632
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||   |||||||          |||||||||||||| |||||    
T  11524778 ctcttggttctcttctcctcttgttctcccttttt-cccaaaactgattgtacgtgaaaacttttctaaa----------cctatttatctcttcccatc 11524690  T
Q  132 tattttatcttatttccac-tttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||||||||| | |||  |||| ||| ||||||||| ||||||||| ||||    
T  11524689 tattttatcttatttcctcttttccccacaaaactctctaaattctcaaaacaacccc 11524632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 191
Target Start/End: Complemental strand, 19485946 - 19485783
Alignment:
Q  32 ctcttggttcttctctcctcttgtt--ctcccttt-ttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctct-ttc 127  Q
    ||||||||||| |||| ||||||||  |||||||  ||  ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||  ||    
T  19485946 ctcttggttctcctcttctcttgttttctcccttgattttccaaaactgatcgtacgtgaaaataattctaaacctagtttctcctatttatctctcctc 19485847  T
Q  128 catctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccaca 191  Q
     ||| | |||||| ||||||| || | ||||||||| || ||||||| | | |||||||||||||    
T  19485846 aatccactttatcctatttcctctatttccactaaactcttctaaattc-ctaaacagccccaca 19485783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 13848861 - 13848778
Alignment:
Q  63 ttttccccaaaactggttgtacgtgaaaataattctaaacctagt-ttctcctatttatctctttccatctattttatcttattt 146  Q
    ||||| |||||||||   |||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  13848861 ttttctccaaaactgtacgtacgtgaaaataattctaa-cctattcttctcctatttatctctttccatctattttatcttattt 13848778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 9176813 - 9176738
Alignment:
Q  33 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt 108  Q
    |||||||||||||||| ||||||||||||||||  ||||||| || ||||||||||||| | ||||||||||||||    
T  9176813 tcttggttcttctctcttcttgttctcccttttctcccaaaattgattgtacgtgaaaacatttctaaacctagtt 9176738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 16092469 - 16092584
Alignment:
Q  40 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaaccta-----gtttctcctatttatctctttccatctat 134  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||| |||| ||  |||  || |     |||||||||||||||||||| ||||||||    
T  16092469 tcttctctcctcttgttctccttttttccc--aaactggttgtacgtaaaaaaaaa-ctattccgacttaggtttctcctatttatctcttcccatctat 16092565  T
Q  135 tttatcttatttccacttt 153  Q
    |||||||||| ||| ||||    
T  16092566 tttatcttatctcctcttt 16092584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 12558077 - 12558193
Alignment:
Q  109 tctcctatttatctctt-tccatctattttatcttatttccactttatccactaaat-tctctaaatcctcaaaacagccccacaacttaattttatttc 206  Q
    |||||||||||| |||  || ||||||||||||||||| || |||| ||| | |||  ||||||||  || ||||||||||||| ||||||| |||||||    
T  12558077 tctcctatttatatctcctctatctattttatcttatt-cctctttttcccccaaaactctctaaaatcttaaaacagccccaccacttaatcttatttc 12558175  T
Q  207 tattttcaagacttattc 224  Q
    |||||||||  |||||||    
T  12558176 tattttcaaatcttattc 12558193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 15203357 - 15203410
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||||| ||||  ||||||||| ||||||||| ||||||||||||||    
T  15203357 tttatcttatttctacttattccactaaactctctaaattctcaaaacagcccc 15203410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 23461489 - 23461419
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc-acaacttaattttattt 205  Q
    ||||||||||| ||||||  ||||||||| ||||||||| ||||||||| |||| |||||||||| ||||||    
T  23461489 tttatcttatt-ccacttattccactaaactctctaaattctcaaaacaacccccacaacttaatcttattt 23461419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 8135106 - 8135037
Alignment:
Q  135 tttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaattttatt 204  Q
    |||||||||||||| ||| |||||||||| || ||||||| | |||||||||||| ||||||||| |||||    
T  8135106 tttatcttatttcctcttaatccactaaactcttctaaattc-caaaacagcccctcaacttaatattatt 8135037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 9724779 - 9724726
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgt 86  Q
    |||||||||||||| || |||||||||||| ||||| | ||||||||||||||||    
T  9724779 ctcttggttcttctatcttcttgttctccc-ttttctcaaaaactggttgtacgt 9724726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 8249170 - 8249077
Alignment:
Q  71 aaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctt-tccatctattttatcttatttccactttatccactaaa 163  Q
    ||||||| || ||||||||||   ||||||||||||||||  || | |||||||| || ||| |||||||||||||||| || | |||||||||    
T  8249170 aaaactgtttttacgtgaaaacttttctaaacctagtttcctctttatatctcttctcaatccattttatcttatttcctctatttccactaaa 8249077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 40554413 - 40554314
Alignment:
Q  106 gtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaac-agccccacaacttaattttat 203  Q
    ||||||||||||||| |||| | ||||  ||||||||||||||||||  ||||||||| || ||||||| | |||||| | |||||||||||||| ||||    
T  40554413 gtttctcctatttatttctt-caatcttctttatcttatttccacttattccactaaactcttctaaattc-caaaacaacccccacaacttaatcttat 40554316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 15095511 - 15095479
Alignment:
Q  131 ctattttatcttatttccactttatccactaaa 163  Q
    |||||||||||||||||||||| ||||||||||    
T  15095511 ctattttatcttatttccacttaatccactaaa 15095479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 15117592 - 15117639
Alignment:
Q  176 tcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||| ||||||| ||| ||||||| |||||||||||||    
T  15117592 tcaaaacagccccaccacttaatctta-ttctattatcaagacttattc 15117639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 18008120 - 18008206
Alignment:
Q  138 atcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 224  Q
    |||||||||||||||  ||||||||| || ||||||| || ||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  18008120 atcttatttccacttattccactaaactcttctaaattct-aaaacagcccccacaacttaatcttattt-tattttcaaatcttattc 18008206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 160; Significance: 4e-85; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 4 - 224
Target Start/End: Complemental strand, 23079884 - 23079661
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || | ||    ||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||    
T  23079884 cccttaccttaagaaaatcgatcagcagttctctcttggttcttctctcctcttgttctcccttttttcc-aaaagtggttgtacgtgaaaataattcta 23079786  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaatt 199  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||     
T  23079785 aacctagtttctcctatttatctcttcccatctattttatcttatttccacttaatccactaaattctctaaattctcaaaacagccccacaacttaatc 23079686  T
Q  200 ttatttctattttcaagacttattc 224  Q
    |||||||||||| ||||||||||||    
T  23079685 ttatttctatttccaagacttattc 23079661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 27473530 - 27473714
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||| |||||||||||||||||||||||| | |||||||        |||||||||||||||||||||||||||||||||||||||| |||||    
T  27473530 ctcttggttctcctctcctcttgttctccctttttctctaaaactg--------tgaaaataattctaaacctagtttctcctatttatctcttcccatc 27473621  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27473622 tattttatcttatttcaacttaatccactaaattctctaaatcctcaaaacagccccacaacttaatcttatttctattttcaagacttattc 27473714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 32 - 223
Target Start/End: Complemental strand, 18357954 - 18357760
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    |||||| |||| |||| |||||||| || || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  18357954 ctcttgattctcctcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccca 18357855  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  18357854 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 18357760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 32 - 223
Target Start/End: Complemental strand, 21080942 - 21080748
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    ||||||||| | |||| |||||||| || || ||||| |||||||||| |||||||||||| || ||||||||||||||||||||||||||||||| |||    
T  21080942 ctcttggttgtcctcttctcttgttttctcccttttctccaaaactggatgtacgtgaaaaatatttctaaacctagtttctcctatttatctcttccca 21080843  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  21080842 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 21080748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 21915703 - 21915897
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    ||||||||||| ||||  ||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||    
T  21915703 ctcttggttctcctcttatcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattataaacctagtttctcctatttatctcttccca 21915802  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  21915803 tctattttatcttatttccacttgatccactaaactctctaaattctcaaaacagccctacaatcttaatcttatttctattttcaagacttatt 21915897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 63 - 223
Target Start/End: Original strand, 25184300 - 25184462
Alignment:
Q  63 ttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccacta 161  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  25184300 ttttctccaaaactggttgtacgtgaaaaataattctaaacctaatttctcctatttatctcttcccatctattttatcttatttccacttaatccacta 25184399  T
Q  162 aattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    || ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  25184400 aactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 25184462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 357960 - 358155
Alignment:
Q  32 ctcttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcc 128  Q
    ||||||||||| |||| ||||||||  ||||| ||||| ||||||||| ||||||||||||| ||||| |||||||||||| ||||||||||||||| ||    
T  357960 ctcttggttctcctcttctcttgttttctccccttttctccaaaactgattgtacgtgaaaaataattataaacctagtttttcctatttatctcttccc 358059  T
Q  129 atctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  358060 atctattttatcttatttccacttaatccactaaactctctaaattcttaaaacagccccacaatcttaatcttatttctattttcaagacttatt 358155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 63 - 224
Target Start/End: Original strand, 22502105 - 22502268
Alignment:
Q  63 ttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccacta 161  Q
    ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  22502105 ttttctccaaaactggttgtacgtgaaaaataattctaaacatagtttctcctatttatctcttcccatctattttatcttatttccacttaatccacta 22502204  T
Q  162 aattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttattc 224  Q
    || ||| ||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  22502205 aactctttaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttattc 22502268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 63 - 224
Target Start/End: Original strand, 22510039 - 22510202
Alignment:
Q  63 ttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccacta 161  Q
    ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  22510039 ttttctccaaaactggttgtacgtgaaaaataattctaaacatagtttctcctatttatctcttcccatctattttatcttatttccacttaatccacta 22510138  T
Q  162 aattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttattc 224  Q
    || ||| ||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  22510139 aactctttaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttattc 22510202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 63 - 223
Target Start/End: Complemental strand, 12626344 - 12626182
Alignment:
Q  63 ttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccacta 161  Q
    ||||| |||||| || ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  12626344 ttttctccaaaattgattgtacgtgaaaaataattctaaacctagtttctcctatttatctcttcccatctattttatcttattttcacttaatccacta 12626245  T
Q  162 aattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    || | ||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  12626244 aactttctaaattctcaaaacaaccccacaatcttaatcttatttctattttcaagacttatt 12626182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 27845684 - 27845792
Alignment:
Q  81 gtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatc-cactaaattctctaaatcctcaa 179  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| |||| || ||| ||| ||||||||| |||||    
T  27845684 gtacgtgaaaataattctaaacctattttctccgatttatctcttcccatctattttatcttatttcctctttttctcacaaaactctctaaattctcaa 27845783  T
Q  180 aacagcccc 188  Q
    |||| ||||    
T  27845784 aacaacccc 27845792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 32 - 188
Target Start/End: Complemental strand, 43946497 - 43946337
Alignment:
Q  32 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttc 127  Q
    ||||||||||||| || ||||||    ||||||||||||| |||||||||   |||||| |||| |||||||| | || ||||||||||||||||||| |    
T  43946497 ctcttggttcttcccttctcttgacttttctccctttttctccaaaactgaacgtacgttaaaaaaattctaa-catattttctcctatttatctcttcc 43946399  T
Q  128 catctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||||||||||||| |||| | |||| ||| ||||||||| ||||||||| ||||    
T  43946398 catctattttatcttatttcctctttttcccacaaaactctctaaattctcaaaacaacccc 43946337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 32 - 188
Target Start/End: Complemental strand, 18546122 - 18545966
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagt-ttctcctatttatctctttccat 130  Q
    |||||||||||  ||||||||||||||||||||| | |||||| ||||||||||||||||   |||||| |||| | ||||||||||||||| || ||||    
T  18546122 ctcttggttctcttctcctcttgttctccctttt-ctccaaaagtggttgtacgtgaaaacttttctaa-cctattattctcctatttatctattcccat 18546025  T
Q  131 ctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagcccc 188  Q
    |||||||||||||||||| |||| | |||  ||| ||||||||| ||||||||| ||||    
T  18546024 ctattttatcttatttcctctttttcccataaaactctctaaattctcaaaacaacccc 18545966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 22704201 - 22704283
Alignment:
Q  134 ttttatcttatttccactttatccactaaattctctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaag 216  Q
    |||||||||||||||||||  ||||||||| ||||||||| |||||||||| |||||||||||||| |||||| ||||||||||    
T  22704201 ttttatcttatttccacttattccactaaactctctaaattctcaaaacagcccccacaacttaatcttattt-tattttcaag 22704283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 24833895 - 24833807
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  24833895 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcccctcatctcaatgttattt-tattttcaaatcttattc 24833807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 224
Target Start/End: Original strand, 26393476 - 26393594
Alignment:
Q  107 tttctcctatttatctctttccatctattttatcttatttccac-tttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatt 204  Q
    ||||||||||||||||||| ||||||| |||||||||||||| | ||| ||||| ||| ||||||||  ||||||||| |||| || || ||| ||||||    
T  26393476 tttctcctatttatctcttcccatctactttatcttatttcctcttttttccacaaaactctctaaaatctcaaaacaacccctcatctcaatatttatt 26393575  T
Q  205 tctattttcaagacttattc 224  Q
    | |||||||||  |||||||    
T  26393576 t-tattttcaaatcttattc 26393594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 99 - 224
Target Start/End: Original strand, 21115828 - 21115953
Alignment:
Q  99 aaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat 198  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||  ||||   ||| ||| ||||||||| ||||| ||| |||| || || |||    
T  21115828 aaacctattttctcctatttatctcttccgatctattttatcttatttcttcttttcgcacaaaactctctaaattctcaacacaacccctcatctcaat 21115927  T
Q  199 -tttatttctattttcaagacttattc 224  Q
     ||||||| |||||||||  |||||||    
T  21115928 atttattt-tattttcaaatcttattc 21115953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 39827173 - 39827115
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaa 91  Q
    ||||||||| |||||||||||||||||||| ||| | | |||||||||||||||||||||    
T  39827173 ctcttggttattctctcctcttgttctccc-tttcctcaaaaactggttgtacgtgaaaa 39827115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 215
Target Start/End: Complemental strand, 24792731 - 24792553
Alignment:
Q  35 ttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatcta 133  Q
    ||||||||||||| |||||||| || || ||||| |||||||| |||  |||| ||||  ||||| | |||| |||||||||||||| |||| | | |      
T  24792731 ttggttcttctcttctcttgttttctcccttttctccaaaacttgtttcacgtaaaaactattctga-cctattttctcctatttatttctt-caaccct 24792634  T
Q  134 ttttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaa 215  Q
     ||||||||||||||||||  || |||||| |||||||||  |||||||||| || || || ||| |||||| |||||||||    
T  24792633 ctttatcttatttccacttattcaactaaactctctaaattttcaaaacagctcctcatctcaatgttattt-tattttcaa 24792553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 3539988 - 3540081
Alignment:
Q  102 cctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaactta 196  Q
    |||||||| |||||||||| || | | | ||| |||||||||||||||||| |||||||||| || ||||||| | |||||||||||| |||||||    
T  3539988 cctagtttttcctatttatttcct-caacctactttatcttatttccacttaatccactaaactcttctaaattc-caaaacagcccctcaactta 3540081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 14694507 - 14694596
Alignment:
Q  135 tttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  ||||||||| || ||||||| |||||||||| |||||||||||||| |||| | |||||||||  |||||||    
T  14694507 tttatcttatttccacttattccactaaactcttctaaat-ctcaaaacagcccccacaacttaatcttatat-tattttcaaatcttattc 14694596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 25046300 - 25046389
Alignment:
Q  135 tttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  |||||||||||| ||||||| | |||| ||| |||||||||||||| |||||| |||||||||  |||||||    
T  25046300 tttatcttatttccacttattccactaaattcttctaaattc-caaagcagcccccacaacttaatcttattt-tattttcaaatcttattc 25046389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 22260229 - 22260294
Alignment:
Q  135 tttatcttatttccactttatccactaaa-ttctctaaatcctcaaaacagccccacaacttaattt 200  Q
    |||||||||||||||||| |||||||||| || ||||| | | |||||||||||| |||||||||||    
T  22260229 tttatcttatttccacttaatccactaaacttttctaatttc-caaaacagcccctcaacttaattt 22260294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 215
Target Start/End: Complemental strand, 24688342 - 24688246
Alignment:
Q  118 tatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaa 215  Q
    |||||||| ||||||||||||||||| |||| ||||  |||| ||| ||||||||  ||||||||| |||| ||||| ||| ||||||| |||||||||    
T  24688342 tatctcttcccatctattttatctta-ttcctcttttcccacaaaactctctaaaatctcaaaacaacccctcaactcaatatttattt-tattttcaa 24688246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 44072742 - 44072803
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaactta 196  Q
    |||||||||||||||||| |||||||||| |||   |||  ||||||||||||| |||||||    
T  44072742 tttatcttatttccacttaatccactaaactcttctaattttcaaaacagcccctcaactta 44072803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 22458514 - 22458467
Alignment:
Q  176 tcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||| ||||||| ||| ||||||| |||||||||||||    
T  22458514 tcaaaacagccccaccacttaatctta-ttctattatcaagacttattc 22458467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 24685066 - 24684991
Alignment:
Q  118 tatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaact 194  Q
    |||||||| ||||||||||||||||| |||| ||||  |||| ||| ||||||||  ||||||||| |||| |||||    
T  24685066 tatctcttcccatctattttatctta-ttcctcttttcccacaaaactctctaaaatctcaaaacaacccctcaact 24684991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 150; Significance: 4e-79; HSPs: 3)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 310 - 502
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  310 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctcttcccatc 408  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttattc 224  Q
    |||||||||||||| |||||| |||||||||| ||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  409 tattttatcttattgccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttattc 502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 32 - 188
Target Start/End: Complemental strand, 2823 - 2668
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||| ||||||||||| ||||||||||||||||| | ||||||||| ||||||||||||||||||||| || |||||||||||||||||| ||| |||||    
T  2823 ctctaggttcttctctgctcttgttctccctttt-ctccaaaactgattgtacgtgaaaataattctagacttagtttctcctatttatcacttcccatc 2725  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||||||| | ||   ||||| ||| ||||||||| | ||||||||||||    
T  2724 tattttatcttattttctctaattccacaaaactctctaaattcacaaaacagcccc 2668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 10633 - 10545
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  ||||||||| ||||||||| ||||||||| |||| || || ||| |||||| |||||||||  |||||||    
T  10633 tttatcttatttccacttattccactaaactctctaaattctcaaaacaacccctcatctcaatattattt-tattttcaaatcttattc 10545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 2e-78; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 17460186 - 17459995
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||| |||||||||||||||||||| |||||| | ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||    
T  17460186 ctcttgattcttctctcctcttgttcttcctttt-ctccaaaactggttgtatgtgaagataattctaaacctagtttctcctatttatctcttcccatc 17460088  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17460087 tattttatattatttccacttaatccactaaattctctaaatcctcaaaacagccccacaacttaatcttatttctattttcaagacttattc 17459995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 23479161 - 23479356
Alignment:
Q  32 ctcttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcc 128  Q
    ||||||||||| |||| ||||||||  |||||||||  |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||    
T  23479161 ctcttggttctcctcttctcttgttttctcccttttctcccaaaactggttgtacgtgaaaagtaattctaaacctagtttttcctatttatctcttccc 23479260  T
Q  129 atctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  23479261 atctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 23479356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 19880901 - 19881095
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    ||||||||||| |||| |||||||| || || ||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||  ||    
T  19880901 ctcttggttctcctcttctcttgttttctcccttttctccaaaattggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttctca 19881000  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  19881001 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 19881095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 60 - 224
Target Start/End: Complemental strand, 19807337 - 19807173
Alignment:
Q  60 cctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccac 159  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  ||||||||||||||||||||||||| |||| |    
T  19807337 cctttttctccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttataacttctcatctattttatcttatttccacttaatcccc 19807238  T
Q  160 taaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    |||||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19807237 taaattctctaaattctgaaaacagccccactacttaatcttatttctattttcaagacttattc 19807173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 26454787 - 26454981
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    ||||||||||| |||| |||||||| || || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  26454787 ctcttggttctcctcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccca 26454886  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||| ||||||||||||||| || |||||| |||||||||||||||||| |||||    
T  26454887 tctattttatcttattttcacttaatccactaaactctctaaattctcaaaacagccccagaatcttaatcttatttctattttcaagatttatt 26454981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 17158934 - 17158742
Alignment:
Q  34 cttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||| || | |||||||| || || ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||    
T  17158934 cttggttctcctattctcttgttttctcccttttctccaaaactggttgtatgtgaaaaataattctaaacctagtttctcctatttatctcttcccatc 17158835  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  17158834 tattttatcttatttccacttaatccactaaactctctaaattctcaaaaaagccccacaatcttaatcttatttctattttcaagacttatt 17158742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 43113098 - 43113288
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||  |||||||||||||||| |||| | ||||||||||||||| || |||| |||| ||| |||| |||||||||||||| | || |||||    
T  43113098 ctcttggttctcttctcctcttgttctccatttt-ctccaaaactggttgtaagtaaaaacaattataa-cctattttctcctatttatattttcccatc 43113195  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||    
T  43113196 tattttatcttatttccacttaatctactaaattttctaaattctcaaaacagccccacaacttaatctcatttctattttcaagacttattc 43113288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 4 - 224
Target Start/End: Original strand, 22184082 - 22184305
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag---ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaa 100  Q
    |||||||||||| ||||||| || | ||   |||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  22184082 cccttaccttaacaaaatcgatcagcagactctcttggttcttctctcctcttgttctccctttt-ctccaaaactgattgtacgtgaaaataattctaa 22184180  T
Q  101 acctagtttctcctatttatctctttccatctattttatcttatttccactttatcc-actaaattctctaaatcctcaaaacagccccacaacttaat- 198  Q
    || || |||||||||||||| |||| |||||||||||||||||||||| |||| ||| || ||| ||||||||| ||||||||| |||| || || |||     
T  22184181 acttattttctcctatttatatcttcccatctattttatcttatttcctctttttccaacaaaactctctaaattctcaaaacaacccctcatctcaata 22184280  T
Q  199 tttatttctattttcaagacttattc 224  Q
    ||||||| |||||||||  |||||||    
T  22184281 tttattt-tattttcaaatcttattc 22184305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 17085048 - 17084898
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||   ||||||||||| ||| ||||||||||||||| |||||    
T  17085048 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaacttttctaaacctattttttcctatttatctcttcccatc 17084950  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 183  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| |||||||||    
T  17084949 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaaca 17084898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 22245215 - 22245025
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||   ||||||||||| ||||||||||||||||||| |||||    
T  22245215 ctcttggttcttctctcctcttgttctcc-tttttctccaaaactgattgtacgtgaaaact-ttctaaacctattttctcctatttatctcttcccatc 22245118  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  22245117 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 22245025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 14102362 - 14102149
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || | ||    |||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||| |||||||    
T  14102362 cccttaccttaagaaaatcgatcagcagctctctcttggttcttctctcctcttgttctccc-ttttctccaaaactggttttacgtgaaaa-aattcta 14102265  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaac-agccccacaacttaa 197  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||  || || |||| ||| ||||||||| | |||||| | |||||||||||||    
T  14102264 aacctagtttctcctatttatcacttcccacctattttatcttatttcc-tttaatcccacaaaactctctaaattcacaaaacaacccccacaacttaa 14102166  T
Q  198 ttttatttctattttcaa 215  Q
    | |||||| |||||||||    
T  14102165 tcttattt-tattttcaa 14102149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 22252293 - 22252104
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||||||||||||||||||  || ||| ||||||||| ||||||||||||||  ||||||||||| |||||||||||||||| || |||||    
T  22252293 ctcttggttcttctctcctcttgttctct-ttcttctccaaaactgattgtacgtgaaaat--ttctaaacctattttctcctatttatctattcccatc 22252197  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  22252196 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 22252104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 32 - 188
Target Start/End: Complemental strand, 19928734 - 19928582
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||| |||||||||||||||||| ||||||||||   |||||||| |||  |||||||||   |||||| |||||||||||||||||||||||| |||||    
T  19928734 ctctcggttcttctctcctcttgctctccctttt---ccaaaacttgtttcacgtgaaaaactttctaa-cctagtttctcctatttatctcttcccatc 19928639  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||||||||| |||  ||||||||| ||||||||| ||||||||||||||    
T  19928638 tattttatcttatttcctcttattccactaaactctctaaattctcaaaacagcccc 19928582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 4 - 224
Target Start/End: Complemental strand, 20501240 - 20501017
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || | ||    ||||||||||||||||||||||||||| |||||||| ||||||||| || ||||||||||   |||||    
T  20501240 cccttaccttaagaaaatcgatcagcagctctctcttggttcttctctcctcttgttct-cctttttctccaaaactgattttacgtgaaaa-ctttcta 20501143  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat 198  Q
    || ||| ||||||||||||||||||| |||||||||||||||||||||| |||| | || | ||| ||||||||| ||||||||| |||| || || |||    
T  20501142 aatctattttctcctatttatctcttcccatctattttatcttatttcctctttttcccccaaaactctctaaattctcaaaacaacccctcatctcaat 20501043  T
Q  199 -tttatttctattttcaagacttattc 224  Q
     ||||||| |||||||||  |||||||    
T  20501042 atttattt-tattttcaaatcttattc 20501017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 49 - 224
Target Start/End: Original strand, 22432815 - 22432991
Alignment:
Q  49 ctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaaccta-gtttctcctatttatctctttccatctattttatcttatttc 147  Q
    |||||||||||||||| ||  ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||| |||||||| ||||||||||||    
T  22432815 ctcttgttctccctttctcttcaaaactggttgtacgtgaaaataattct-aacctatttttctcctatttatctcttcccatctatcttatcttatttc 22432913  T
Q  148 cactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    | |||| | |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  22432914 ctctttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 22432991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 16198915 - 16199032
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    ||||||||||| |||| |||||||| || || ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||     
T  16198915 ctcttggttctcctcttctcttgttttctcccttttctccaaaactagttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccct 16199014  T
Q  130 tctattttatcttatttc 147  Q
    ||||||||||||||||||    
T  16199015 tctattttatcttatttc 16199032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 22526483 - 22526678
Alignment:
Q  32 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttc 127  Q
    |||||||||||  ||||||||||    ||||||||||| | |||||||||   |||||||||||||||||||| |||| ||||||||||||||||||| |    
T  22526483 ctcttggttctcttctcctcttgatttttctccctttt-ctccaaaactgaacgtacgtgaaaataattctaa-cctattttctcctatttatctcttcc 22526580  T
Q  128 catctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||| ||||||||||| |||| | |||| ||| ||||||||| ||||||||| |||  ||||| ||| ||||||| |||||||||  |||||||    
T  22526581 catctatttcatcttatttcctctttttcccacaaaactctctaaattctcaaaacaacccatcaactcaatatttattt-tattttcaaatcttattc 22526678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 188
Target Start/End: Original strand, 28398561 - 28398715
Alignment:
Q  32 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttc 127  Q
    ||||||||||||| || ||||||    ||||||||||||| ||||||||| | ||||| |||||||||||||| | ||     |||||||||||||||||    
T  28398561 ctcttggttcttcccttctcttgacttttctccctttttctccaaaactgatcgtacgggaaaataattctaa-cata-----tcctatttatctctttc 28398654  T
Q  128 catctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| ||||    
T  28398655 catctattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccc 28398715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 22342033 - 22342139
Alignment:
Q  82 tacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaa 181  Q
    ||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||| ||   ||||| ||| ||||||||| | |||||    
T  22342033 tacgtgaaaataattctaaacctagtttctcctatttatcatttcccatctattttatcttatttcctctaattccacaaaactctctaaattcacaaaa 22342132  T
Q  182 cagcccc 188  Q
    || ||||    
T  22342133 caacccc 22342139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 40491999 - 40491886
Alignment:
Q  40 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag-tttctcctatttatctctttccatctatttta 138  Q
    ||||||||||||||||||||||||||  ||||||| || |||||||||||||  ||||| | | ||| ||||||||||||||||||| ||||||||||||    
T  40491999 tcttctctcctcttgttctcccttttctcccaaaagtgattgtacgtgaaaactattctga-cttaggtttctcctatttatctcttcccatctatttta 40491901  T
Q  139 tcttatttccacttt 153  Q
    |||||||||| ||||    
T  40491900 tcttatttcctcttt 40491886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 82 - 224
Target Start/End: Original strand, 22996840 - 22996982
Alignment:
Q  82 tacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaa 180  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||  ||| | |||| ||| ||||||||| ||||||    
T  22996840 tacgtgaaaataattctaaacctattttctc-tatttatatctttccatctattttatcttatttcctttttttcccacaaaactctctaaattctcaaa 22996938  T
Q  181 acagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||| |||| || || ||| ||||||| |||||||||  |||||||    
T  22996939 acaacccctcatctcaatatttattt-tattttcaaatcttattc 22996982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 81 - 224
Target Start/End: Original strand, 22984690 - 22984833
Alignment:
Q  81 gtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaa 179  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||| ||||||||||||| |||||||| |||| | |||| ||| ||||||||| |||||    
T  22984690 gtacgtgaaaataattctaaacctattttct-ctatttatttcttcccatctattttatattatttcctctttttcccacaaaaatctctaaattctcaa 22984788  T
Q  180 aacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    |||| |||| || || ||| ||||||| |||||||||  |||||||    
T  22984789 aacaacccctcatctcaatatttattt-tattttcaaatcttattc 22984833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 188
Target Start/End: Complemental strand, 19153990 - 19153833
Alignment:
Q  33 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctct-ttccat 130  Q
    |||||||||||||||| ||||||||||||||||  ||||||| || |||||||||||||   |||||||||||||| || ||||||||| |||  || ||    
T  19153990 tcttggttcttctctcttcttgttctcccttttctcccaaaagtgattgtacgtgaaaacttttctaaacctagttctcacctatttatatctcctctat 19153891  T
Q  131 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||| ||||||||| |   ||| ||||| ||| ||| ||||| | ||||||||||||    
T  19153890 ctattctatcttattcctcttttttccacaaaactctttaaattcacaaaacagcccc 19153833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 224
Target Start/End: Original strand, 16800510 - 16800628
Alignment:
Q  107 tttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatt 204  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||| | |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||    
T  16800510 tttctcctatttatctcttcccatctattttatcttatttcctctttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttatt 16800609  T
Q  205 tctattttcaagacttattc 224  Q
    | |||||||||  |||||||    
T  16800610 t-tattttcaaatcttattc 16800628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 17085282 - 17085224
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaa 91  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  17085282 ctcttggttcttctctcctcttgttctccc-ttttctccaaaactggttgtacgtgaaaa 17085224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 224
Target Start/End: Complemental strand, 2417918 - 2417799
Alignment:
Q  106 gtttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttat 203  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| | || | ||| ||||||||| ||||||||| |||| || || ||| |||||    
T  2417918 gtttctcctatttatctcttcccatctattttatcttatttcctctttttcccccaaaactctctaaattctcaaaacaacccctcatctcaatatttat 2417819  T
Q  204 ttctattttcaagacttattc 224  Q
    || |||||||||  |||||||    
T  2417818 tt-tattttcaaatcttattc 2417799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 224
Target Start/End: Complemental strand, 20532506 - 20532319
Alignment:
Q  40 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaata-attctaaacctag--tttctcctatttatctctttccatctattt 136  Q
    |||||||||||||||||| |||||||  |||||||||| |||||||| ||||   ||||| | | |||  |||||| |||||||||||| ||||||||||    
T  20532506 tcttctctcctcttgttcccccttttctcccaaaactgtttgtacgtaaaaaactattctga-cttagattttctcatatttatctcttcccatctattt 20532408  T
Q  137 tatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    |||||||| ||| |||| | |||| ||| ||| ||||  ||||||||| |||| ||||| ||| ||||||| |||||||||  |||||||    
T  20532407 tatcttatgtcctctttttcccacaaaactctataaaatctcaaaacaacccctcaactcaatatttattt-tattttcaaatcttattc 20532319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 224
Target Start/End: Complemental strand, 22423456 - 22423268
Alignment:
Q  40 tcttctctcctcttgttctccctttttc-cccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatt--tatctctttccatctat 134  Q
    |||||||||||||||||||||||||||| ||||||| || |||||||||||||  ||| |  || |||  |||||||||||  |||||||| ||||||||    
T  22423456 tcttctctcctcttgttctccctttttctcccaaaagtgattgtacgtgaaaactattat-gacttaggttttctcctatttatatctcttcccatctat 22423358  T
Q  135 tttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||| |||| |||| | |||| ||| ||||||||  ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  22423357 tttatctta-ttcctctttttcccacaaaactctctaaaatctcaaaacaacccctcatctcaatgtttattt-tattttcaaatcttattc 22423268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 17272502 - 17272451
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagcc 186  Q
    ||||||||||||||||||  ||||||||| ||||||||| ||||||||||||    
T  17272502 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcc 17272451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 45469120 - 45469009
Alignment:
Q  102 cctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaattt 200  Q
    |||||||| |||||||||| || | | | ||| |||||||||||||||||| |||||||||| || ||||||| | ||||| |||||| ||||||||| |    
T  45469120 cctagtttttcctatttatttcct-caacctactttatcttatttccacttaatccactaaactcttctaaattc-caaaatagcccctcaacttaatat 45469023  T
Q  201 tatttctattttcaa 215  Q
    ||||| |||||||||    
T  45469022 tattt-tattttcaa 45469009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 13660727 - 13660639
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    |||||||||||||| |||  ||||||||| ||||||||| |||||||||||| | || || ||| |||||| |||||||||  |||||||    
T  13660727 tttatcttatttcctcttattccactaaactctctaaattctcaaaacagcctctcatctcaatattattt-tattttcaaatcttattc 13660639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 13719370 - 13719282
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    |||||||||||||| |||  ||||||||| ||||||||| |||||||||||| | || || ||| |||||| |||||||||  |||||||    
T  13719370 tttatcttatttcctcttattccactaaactctctaaattctcaaaacagcctctcatctcaatattattt-tattttcaaatcttattc 13719282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 37516682 - 37516734
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacg 85  Q
    ||||||||||||||||||||||||||| || ||||| |||||| ||||||||||    
T  37516682 ctcttggttcttctctcctcttgttcttcc-ttttctccaaaattggttgtacg 37516734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 17218879 - 17218969
Alignment:
Q  135 tttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag--ccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  ||||||||| || ||||||| | ||||||||  |||||||||||||| |||||| |||||||||  |||||||    
T  17218879 tttatcttatttccacttattccactaaactcttctaaattc-caaaacagccccccacaacttaatattattt-tattttcaaatcttattc 17218969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 17438615 - 17438523
Alignment:
Q  55 ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctct-ttccatctattttatcttatt 145  Q
    |||||||||||  || ||||||| |||||||||||||   |||||||||||||| || ||||||||| |||  || ||||||| |||||||||    
T  17438615 ttctcccttttctccaaaaactgattgtacgtgaaaacttttctaaacctagttctcacctatttatatctcctctatctattctatcttatt 17438523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 8e-65; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 33 - 223
Target Start/End: Original strand, 17011808 - 17012001
Alignment:
Q  33 tcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccat 130  Q
    |||||||||| |||| |||||||| || || ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  17011808 tcttggttctcctcttctcttgttttctcccttttctccaaaactggttgtatgtgaaaaataattctaaacctagtttctcctatttatctcttcccat 17011907  T
Q  131 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    |||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  17011908 ctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 17012001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 31457039 - 31457234
Alignment:
Q  32 ctcttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcc 128  Q
    ||||||||||| || | ||||||||  ||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||| || ||    
T  31457039 ctcttggttctcctgttctcttgttttctccctttttctccaaaactgattgtacgtgaaaaataattataaacctagtttctcctatttatctattccc 31457138  T
Q  129 atctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  31457139 atctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 31457234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 63 - 223
Target Start/End: Original strand, 17876305 - 17876467
Alignment:
Q  63 ttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccacta 161  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  17876305 ttttctccaaaactggttgtacatgaaaaataattctaaacctagtttctcctatttatctcttcccatctattttatcttatttccacttaatccacta 17876404  T
Q  162 aattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    || ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  17876405 aactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 17876467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 32 - 188
Target Start/End: Original strand, 6766832 - 6766987
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  6766832 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatcacttcccatc 6766930  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    |||||||||||||||||  |   ||||| ||| ||||||||| | ||||||||||||    
T  6766931 tattttatcttatttcctttaattccacaaaactctctaaattcacaaaacagcccc 6766987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 23476479 - 23476670
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||| ||| |||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  23476479 ctcttggttctcctcgcctcttgttctccctttt-ctccaaaactgattgtacgtgaaaataattctaaacctattttctcctatttatctcttcccatc 23476577  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  23476578 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 23476670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 32 - 188
Target Start/End: Complemental strand, 25573555 - 25573400
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||   ||||||||||| ||||||||||||||||||| |||||    
T  25573555 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtatgtgaaaacttttctaaacctattttctcctatttatctcttcccatc 25573457  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    |||| |||||||||||| ||||  |||| ||| ||||||||| ||||||||| ||||    
T  25573456 tattctatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccc 25573400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 4 - 188
Target Start/End: Original strand, 266080 - 266267
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || | ||    |||||||||||||||||||||||||||||| ||||| |||||||| ||||||| ||||||||| ||||    
T  266080 cccttaccttaagaaaatcgatcagcagctctctcttggttcttctctcctcttgttctccc-ttttctccaaaactagttgtacatgaaaataactcta 266178  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||||||||  |   ||||| ||| ||||||||| | ||||||||||||    
T  266179 aacctaatttctcctatttatcacttcccatctattttatcttatttcctttaattccacaaaactctctaaattcacaaaacagcccc 266267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 29448919 - 29449036
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccat 130  Q
    ||||||||||| ||||  ||||||| || || ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  29448919 ctcttggttctcctcttatcttgttttctcccttttctcaaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatcacttcccat 29449018  T
Q  131 ctattttatcttatttcc 148  Q
    ||||||||||||||||||    
T  29449019 ctattttatcttatttcc 29449036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 23470767 - 23470859
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctt 125  Q
    ||||| ||||| |||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  23470767 ctcttagttctcctctcctcttgttctccctttt-ctccaaaactgattgtacgtgaaaataattctaaacctattttctcctatttatctctt 23470859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 138 - 223
Target Start/End: Complemental strand, 33898534 - 33898448
Alignment:
Q  138 atcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  33898534 atcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 33898448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 62 - 224
Target Start/End: Original strand, 40726790 - 40726953
Alignment:
Q  62 tttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctct-ttccatctattttatcttatttccactttatccact 160  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||  || ||| | |||||||||||||| || | ||||||    
T  40726790 tttttctccaaaactgatcgtacgtgaaaataattctaaacctagtttctcctatttatctctcctcaatccactttatcttatttcctctatgtccact 40726889  T
Q  161 aaattc-tctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||| || ||||||| | | ||||||||||||| || ||| ||||||| |||||||||  |||||||    
T  40726890 aaactcttctaaattc-ctaaacagccccacatctcaatatttattt-tattttcaaatcttattc 40726953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 188
Target Start/End: Original strand, 15797414 - 15797571
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctctttccat 130  Q
    ||||||||| |||||| |||||||||||||||||  || ||||||| |||||||||||||   |||||||||||||| || ||||||||| |||  ||||    
T  15797414 ctcttggttattctcttctcttgttctcccttttctccaaaaactgcttgtacgtgaaaacttttctaaacctagttctcacctatttatatctccccat 15797513  T
Q  131 ctattttatcttatttccac-tttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    |||| |||||||| |||||| ||| ||||| ||| ||||||||| | ||||||| ||||    
T  15797514 ctatcttatctta-ttccacttttttccacaaaactctctaaattcacaaaacaacccc 15797571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 63 - 224
Target Start/End: Original strand, 20572870 - 20573031
Alignment:
Q  63 ttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttat-ccacta 161  Q
    ||||| |||||||||   |||||||||||   |||||| |||| ||||||||||||||||||||||||||||||||||||||||||  ||| | |||| |    
T  20572870 ttttctccaaaactgaacgtacgtgaaaacttttctaa-cctattttctcctatttatctctttccatctattttatcttatttcctttttttcccacaa 20572968  T
Q  162 aattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    || || |||||| ||||||||| |||| || || ||| ||||||| |||||||||| |||||||    
T  20572969 aactcactaaattctcaaaacaacccctcatctcaatatttattt-tattttcaagtcttattc 20573031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 10818037 - 10818126
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  10818037 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcccccacaacttaatcttattt-tattttcaaatcttattc 10818126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 22776897 - 22776808
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  22776897 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcccccacaacttaatcttattt-tattttcaaatcttattc 22776808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 21344378 - 21344270
Alignment:
Q  81 gtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaa 179  Q
    |||||||||||   ||||||||||| | |||||||| ||||||||||||||||||||||||||||| | |||| | |||| ||| ||||||||  |||||    
T  21344378 gtacgtgaaaacttttctaaacctattctctcctatatatctctttccatctattttatcttatttgctctttttcccacaaaactctctaaaatctcaa 21344279  T
Q  180 aacagcccc 188  Q
    |||| ||||    
T  21344278 aacaacccc 21344270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 224
Target Start/End: Complemental strand, 19616424 - 19616237
Alignment:
Q  35 ttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatcta 133  Q
    ||||||||||||| |||||||| |  || ||||| |||||||| ||| ||||||||||  ||| | | |||| |||||||||||||| || | | | |      
T  19616424 ttggttcttctcttctcttgttttatcccttttctccaaaacttgttttacgtgaaaactattatga-cctattttctcctatttatttcct-caaccct 19616327  T
Q  134 ttttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
     ||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  19616326 ctttatcttatttccacttattccactaaactctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaaatcttattc 19616237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 21327334 - 21327240
Alignment:
Q  95 ttctaaacctagtttctcctatttatctctttccatctattttatcttatttccact-ttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||| | |||||||| ||||||||||||||||||||||||||||||| || ||  |||| ||| ||||||||  ||||||||| ||||    
T  21327334 ttctaaacctattctctcctatatatctctttccatctattttatcttatttcctctctttcccacaaaactctctaaaatctcaaaacaacccc 21327240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 21405500 - 21405412
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  21405500 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaaatcttattc 21405412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 41860468 - 41860380
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  41860468 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaaatcttattc 41860380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 224
Target Start/End: Complemental strand, 25249800 - 25249609
Alignment:
Q  35 ttggttcttctctcctcttg--ttctccctttttccccaaaa-ctggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||| ||||||  ||||||||||||| |||||| || ||| |||||| |||  ||||| |  ||| |||||||||||||| || | | | |    
T  25249800 ttggttcttctcttctcttggtttctccctttttctccaaaaacttgttttacgtgtaaactattcttactctactttctcctatttatttcct-caacc 25249702  T
Q  132 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagcccc-acaacttaattttatttctattttcaagacttattc 224  Q
       ||||||||||||||||||  ||||||||| || ||||||| | |||||||||||| |||||||||| |||||| |||||||||  |||||||    
T  25249701 ctctttatcttatttccacttattccactaaactcttctaaattc-caaaacagcccctacaacttaatattattt-tattttcaaatcttattc 25249609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 224
Target Start/End: Complemental strand, 25313584 - 25313393
Alignment:
Q  35 ttggttcttctctcctcttg--ttctccctttttccccaaaa-ctggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||| ||||||  ||||||||||||| |||||| || ||| |||||| |||  ||||| |  ||| |||||||||||||| || | | | |    
T  25313584 ttggttcttctcttctcttggtttctccctttttctccaaaaacttgttttacgtgtaaactattcttactctactttctcctatttatttcct-caacc 25313486  T
Q  132 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagcccc-acaacttaattttatttctattttcaagacttattc 224  Q
       ||||||||||||||||||  ||||||||| || ||||||| | |||||||||||| |||||||||| |||||| |||||||||  |||||||    
T  25313485 ctctttatcttatttccacttattccactaaactcttctaaattc-caaaacagcccctacaacttaatattattt-tattttcaaatcttattc 25313393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 26739696 - 26739578
Alignment:
Q  107 tttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatt 204  Q
    |||||| ||| |||||||| |||||||||||||||||||||| |||| | |||| ||| ||||||||  ||||||||| |||| || || ||| ||||||    
T  26739696 tttctcttatatatctcttcccatctattttatcttatttcctctttttcccacaaaactctctaaaatctcaaaacaacccctcatctcaatatttatt 26739597  T
Q  205 tctattttcaagacttattc 224  Q
    | |||||||||  |||||||    
T  26739596 t-tattttcaaatcttattc 26739578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 21870698 - 21870617
Alignment:
Q  108 ttctcctatttatctct--ttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||||| |||  | ||||||||||||||||||| ||||||   |||||||| ||||||||| | ||||||||||||    
T  21870698 ttctcctatttatatctcctcccatctattttatcttatt-ccacttataccactaaactctctaaattcacaaaacagcccc 21870617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 21874978 - 21874897
Alignment:
Q  108 ttctcctatttatctct--ttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||||| |||  | ||||||||||||||||||| ||||||   |||||||| ||||||||| | ||||||||||||    
T  21874978 ttctcctatttatatctcctcccatctattttatcttatt-ccacttataccactaaactctctaaattcacaaaacagcccc 21874897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 20469087 - 20468969
Alignment:
Q  104 tagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaatttta 202  Q
    ||||||||||||||||| || | | | |||||||||||||||| |||||  ||||||||| || ||||||| |  ||||||||||| ||||| ||| |||    
T  20469087 tagtttctcctatttatttcct-caacctattttatcttattttcacttattccactaaactcttctaaattc-gaaaacagcccctcaactcaatatta 20468990  T
Q  203 tttctattttcaagacttattc 224  Q
    ||| |||||||||  |||||||    
T  20468989 ttt-tattttcaaatcttattc 20468969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 123; Significance: 5e-63; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 21176 - 21370
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    ||||||||||| |||| |||||||| || || ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |     
T  21176 ctcttggttctcctcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttctct 21275  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  21276 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 21370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 5e-63; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 40620611 - 40620805
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    ||||| ||||| |||| |||||||| || || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  40620611 ctcttagttctcctcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccca 40620710  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  40620711 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaacaaccccacaatcttaatcttatttctattttcaagacttatt 40620805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 15009042 - 15009236
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    ||||||||||| |||| |||||||| || || ||||| ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||| ||     
T  15009042 ctcttggttctcctcttctcttgttttctcccttttctccaaaactggttgaacgtgaaaaataattctaaaactagtttctcctatttatctcttccct 15009141  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  15009142 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 15009236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 4 - 188
Target Start/End: Original strand, 12841606 - 12841793
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || | ||    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  12841606 cccttaccttaagaaaatcgatcagcagctctctcttggttcttctctcctcttgttctccc-ttttctccaaaactggttgtacgtgaaaataattcta 12841704  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||| ||   ||||| ||| ||||||||| | ||||||||||||    
T  12841705 aacctagtttctcctatttatcacttcccatctattttatcttatttcctctaattccacaaaactctctaaattcacaaaacagcccc 12841793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 4 - 183
Target Start/End: Complemental strand, 14852034 - 14851852
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtagctct----tggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || ||||||||    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||   |||||    
T  14852034 cccttaccttaagaaaatcgatcagtagctctctcttggttcttctctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaacttttcta 14851936  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 183  Q
    || ||| ||| ||||||||||||||| |||||||||||||||||||||| ||||  |||| ||| ||||||||| |||||||||    
T  14851935 aatctattttatcctatttatctcttcccatctattttatcttatttcctcttttcccacaaaactctctaaattctcaaaaca 14851852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 4 - 183
Target Start/End: Complemental strand, 32306162 - 32305980
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || | ||    ||||||||||||| |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||    
T  32306162 cccttaccttaagaaaatcgatcagcagctctctcttggttcttccctcctcttgttctccc-ttttctccaaaactagttgtacgtgaaaataattcta 32306064  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 183  Q
    ||| || |||||||||||| |||||| |||||||||||||||||||||| ||||  |||| ||| ||||||||| |||||||||    
T  32306063 aacttattttctcctatttttctcttcccatctattttatcttatttcctcttttcccacaaaactctctaaattctcaaaaca 32305980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 47 - 224
Target Start/End: Complemental strand, 26049582 - 26049406
Alignment:
Q  47 tcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttattt 146  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||  |||||||||||||||||||    
T  26049582 tcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaataattataaacctattttctcctatttatctcttctcatctattttatcttattt 26049484  T
Q  147 ccactttatccactaaattctctaaatcctcaaaacagccccacaactt-aattttatttctattttcaagacttattc 224  Q
    || ||||   ||| ||| ||||||||| ||||||||| |||| || ||| || ||||||| |||||||||| |||||||    
T  26049483 cctcttttctcacaaaactctctaaattctcaaaacaacccctcatcttaaaatttattt-tattttcaagtcttattc 26049406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 4 - 224
Target Start/End: Original strand, 15792736 - 15792959
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtagct---cttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaa 100  Q
    |||||||||||| ||||||| || | ||||   ||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||   ||||||    
T  15792736 cccttaccttaacaaaatcgatcagcagcttctcttggttcttctctcttcttgttctccctttt-ctccaaaactggttgtacgtgaaaacttttctaa 15792834  T
Q  101 acctagtttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat- 198  Q
    | ||| ||||||| ||||||||||| |||||||||||||||||||||| |||| | |||| ||| ||||||||| ||||||||| |||| || || |||     
T  15792835 atctattttctccgatttatctcttcccatctattttatcttatttcctctttttcccacaaaactctctaaattctcaaaacaacccctcatctcaata 15792934  T
Q  199 tttatttctattttcaagacttattc 224  Q
    ||||||| |||||||||  |||||||    
T  15792935 tttattt-tattttcaaatcttattc 15792959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 32 - 188
Target Start/End: Original strand, 14651700 - 14651852
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||||||||||||||||||||||||   |||||||| |||  |||| |||| |||||||| |||| ||||||||||||||||||| |||||    
T  14651700 ctcttggttcttctctcctcttgttctccctttt---ccaaaacttgtttcacgtaaaaacaattctaa-cctattttctcctatttatctcttcccatc 14651795  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||||||| | | |  ||||||||| ||||||||| ||||||||| ||||    
T  14651796 tattttatcttatttactcctcttccactaaactctctaaattctcaaaacaacccc 14651852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 26790328 - 26790482
Alignment:
Q  32 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagttt-ctcctatttatctcttt 126  Q
    ||||||||||||| || ||||||    ||||||||||| | |||||||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||    
T  26790328 ctcttggttcttcccttctcttgacttttctccctttt-ctccaaaactggttgtacgtgaaaataattataa-cctatttttctcctatttatctcttt 26790425  T
Q  127 ccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 183  Q
    |||||||||||||||||||||| ||||  |||| ||| ||||||||| |||||||||    
T  26790426 ccatctattttatcttatttcctcttttcccacaaaactctctaaattctcaaaaca 26790482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 107 - 224
Target Start/End: Original strand, 13847356 - 13847464
Alignment:
Q  107 tttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttc 206  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||         |||||||||||||||||||||| |||||||||||||| |||||||    
T  13847356 tttctcctatttatctcttcccatctattttatcttatttccactt---------aattctctaaatcctcaaaacaaccccacaacttaatcttatttc 13847446  T
Q  207 tattttcaagacttattc 224  Q
    ||||||||| ||||||||    
T  13847447 tattttcaaaacttattc 13847464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 40 - 224
Target Start/End: Original strand, 14826092 - 14826278
Alignment:
Q  40 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatttatctctttccatctatttt 137  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||  ||||| | | |||  ||||||||||||||||||| |||||||||||    
T  14826092 tcttctctcctcttgttctcccttttctcccaaaactggttgtacgtaaaaactattctga-cttaggttttctcctatttatctcttaccatctatttt 14826190  T
Q  138 atcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||| |||| | |||| ||| ||||||||| ||| ||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  14826191 atcttatttcctctttttcccacaaaactctctaaattctccaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 14826278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 21103939 - 21104086
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||| ||||||||||||||||||||||||||||   |||||||| |||  |||| |||| |||||||| |||| |||||| |||||||||||| |||||    
T  21103939 ctcttagttcttctctcctcttgttctccctttt---ccaaaacttgtttcacgtaaaaacaattctaa-cctattttctcttatttatctcttcccatc 21104034  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 183  Q
    ||||||||||||||| | | |  ||||||||| ||||||||  |||||||||    
T  21104035 tattttatcttatttactcctcttccactaaactctctaaactctcaaaaca 21104086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 40909833 - 40910022
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||| |||||||||||||||||||||||||||||   |||||||| |||  ||||| |||   |||||| |||| ||||||||||||||||||| |||||    
T  40909833 ctctcggttcttctctcctcttgttctccctttt---ccaaaacttgtttcacgtgtaaact-ttctaaccctactttctcctatttatctcttcccatc 40909928  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||||||||  ||||  |||| ||| ||||||||| | ||||||| |||| || || ||| ||||||| || ||||||  |||||||    
T  40909929 tattttatcttatttcttcttttcccacaaaactctctaaattcacaaaacaacccctcatctaaatatttatttttactttcaaatcttattc 40910022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 40 - 224
Target Start/End: Original strand, 17334279 - 17334465
Alignment:
Q  40 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatttatctctttccatctatttt 137  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||||| ||||  ||| | | | |||  ||||||||||||||||||| |||||||||||    
T  17334279 tcttcgctcctcttgttctcccttttctcccaaaactggttgtacgtaaaaactattatga-cttaggttttctcctatttatctcttcccatctatttt 17334377  T
Q  138 atcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||| |||| | || | ||| ||||||||  ||||||||| |||| ||||| ||| ||||||| |||||||||  |||||||    
T  17334378 atcttatttcctctttttccctcaaaactctctaaaatctcaaaacaacccctcaactcaatatttattt-tattttcaaatcttattc 17334465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 191
Target Start/End: Original strand, 22354765 - 22354896
Alignment:
Q  61 ctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctct-ttccatctattttatcttatttccactttatccac 159  Q
    ||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||  || ||| | |||||||||||||| || | |||||    
T  22354765 ctttttctccaaaactgatcgtacgtgaaaataattctaaacctagtttctcctatttatctctcctcaatccactttatcttatttcctctatttccac 22354864  T
Q  160 taaattc-tctaaatcctcaaaacagccccaca 191  Q
    |||| || ||||||| | | |||||||||||||    
T  22354865 taaactcttctaaattc-ctaaacagccccaca 22354896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 144
Target Start/End: Original strand, 16044035 - 16044143
Alignment:
Q  36 tggttcttctctcctcttgttctccctttttccccaaaactgg-ttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctat 134  Q
    ||||||| |||| |||||||||||| ||||  || |||||| | ||||| ||||||| |||||||| |||| ||||||||||||||||||| ||||||||    
T  16044035 tggttctcctcttctcttgttctccattttctccaaaaacttgattgtatgtgaaaacaattctaa-cctattttctcctatttatctcttcccatctat 16044133  T
Q  135 tttatcttat 144  Q
    ||||||||||    
T  16044134 tttatcttat 16044143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 33 - 224
Target Start/End: Original strand, 19739815 - 19740004
Alignment:
Q  33 tcttggttcttctctcctcttgtt-ctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||||| |||||||| ||||||||||| |||||||| |||  |||| ||||  ||||| | |||| |||||||||||||| || | | | |    
T  19739815 tcttggttcttctcttctcttgtttctccctttttctccaaaacttgtttcacgtaaaaactattctga-cctattttctcctatttatttcct-caacc 19739912  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
       ||||||||||||||||||| ||||||||| |||||||||  ||||||||| ||| || || ||| |||||| |||||||||  |||||||    
T  19739913 ctctttatcttatttccactttttccactaaactctctaaatattcaaaacagaccctcatctcaatattattt-tattttcaaatcttattc 19740004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 215
Target Start/End: Original strand, 27996868 - 27997049
Alignment:
Q  33 tcttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccat 130  Q
    ||||||||||||||| ||||||||  ||||||||||| |||||||| |||  |||| ||||  ||||| | |||| |||||||||||||| || | | |     
T  27996868 tcttggttcttctcttctcttgttttctccctttttctccaaaacttgtttcacgtaaaaactattctga-cctattttctcctatttatttcct-caac 27996965  T
Q  131 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaa 215  Q
    |   ||||||||||||||||||  ||||||||| ||||||||| |||||||| ||||| || || ||| |||||| |||||||||    
T  27996966 cctctttatcttatttccacttattccactaaactctctaaattctcaaaactgcccctcatctcaatattattt-tattttcaa 27997049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 35811353 - 35811300
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgt 86  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  35811353 ctcttggttcttttctcctcttgttctccc-ttttctccaaaactggttgtacgt 35811300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 43251105 - 43251034
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaaca-gccccacaacttaattttattt 205  Q
    ||||||||||||||||||  ||||||||| | |||||||  ||||||||  |||||||||||||||||||||    
T  43251105 tttatcttatttccacttattccactaaactgtctaaattatcaaaacatcccccacaacttaattttattt 43251034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 6512816 - 6512895
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaa 215  Q
    ||||||||||| ||||||  ||||||||| ||||| ||| |||||||||| |||||||||||||| |||||| |||||||||    
T  6512816 tttatcttatt-ccacttattccactaaactctcttaattctcaaaacagcccccacaacttaatcttattt-tattttcaa 6512895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 14186628 - 14186673
Alignment:
Q  178 aaaacagccccacaacttaattttatttctattttcaagacttatt 223  Q
    |||||||||||||| || ||| ||||||||||||||||||||||||    
T  14186628 aaaacagccccacatctcaatattatttctattttcaagacttatt 14186673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 21368 - 21457
Alignment:
Q  135 tttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  ||||||||| || ||||||| | |||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  21368 tttatcttatttccacttattccactaaactcttctaaattc-caaaacagtccccacaacttaatcttattt-tattttcaaatcttattc 21457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 51993744 - 51993833
Alignment:
Q  135 tttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagc-cccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  ||||||||| || ||||||| | ||||||||| ||||||||||||| |||||| |||||||||  |||||||    
T  51993744 tttatcttatttccacttattccactaaactcttctaaattc-caaaacagctcccacaacttaatcttattt-tattttcaaatcttattc 51993833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 13591046 - 13590993
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgt 86  Q
    |||||||||||||| || |||||||||||| ||||| | ||||||||||||||||    
T  13591046 ctcttggttcttctatcttcttgttctccc-ttttctcaaaaactggttgtacgt 13590993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 121; Significance: 8e-62; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 16683 - 16878
Alignment:
Q  32 ctcttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcc 128  Q
    ||||||||||| |||| ||||||||  ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||  |||||||||||| ||    
T  16683 ctcttggttctcctcttctcttgttttctccctttttctccaaaactggttgtacgtgaaaaataattctaaacctaatttctaatatttatctcttccc 16782  T
Q  129 atctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  16783 atctattttatcttatttccacttaatccactaaactctctaaattctcaaaatagccccacaatcttaatcttatttctattttcaagacttatt 16878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 121; Significance: 8e-62; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 32 - 223
Target Start/End: Complemental strand, 29189 - 28995
Alignment:
Q  32 ctcttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcc 128  Q
    ||||||||||| |||| ||||||||  |||||||||| || |||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  29189 ctcttggttctcctcttctcttgttttctcccttttttcc-aaaactagttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccc 29091  T
Q  129 atctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  29090 atctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttctaatttcaagacttatt 28995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 11302 - 11496
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    ||||||||||| |||| |||||||| || || ||||| | |||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  11302 ctcttggttctcctcttctcttgttttctcccttttctcaaaaaatggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccca 11401  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| || |||||| ||||||||||||||||||||||||    
T  11402 tctattttatcttatttccacttaatccactaaactctctaaattctcaaaacagccccaaaatcttaatcttatttctattttcaagacttatt 11496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 2016 - 2209
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    ||||||||||| |||| |||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||    
T  2016 ctcttggttctcctcttctcttgttttctcccttttctccaaaactggttgtacgtgaaaaataattttaaacctagtttctcctatttatctcttccca 2115  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  2116 tctattttatcttatttccac-ttatccactaaactctctaaattctcaaaacagccccacaatcttaatcttatttccattttcaagacttatt 2209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 118; Significance: 5e-60; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 1244 - 1440
Alignment:
Q  32 ctcttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcc 128  Q
    ||||||||||| |||| ||||||||  ||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  1244 ctcttggttctcctcttctcttgttttctccctttttctccaaaactagttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccc 1343  T
Q  129 atctattttatcttatttccactttatccactaaattctctaaatcctcaaaacag-ccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    |||||||||||||||||| ||||| |||||||||| ||||||||| |||||||||| |||| ||| |||||| ||||||||||||||||||||||||    
T  1344 atctattttatcttattttcacttaatccactaaactctctaaattctcaaaacagccccctcaatcttaatcttatttctattttcaagacttatt 1440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 63 - 223
Target Start/End: Original strand, 9071 - 9233
Alignment:
Q  63 ttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccacta 161  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  9071 ttttctccaaaactggttgtatgtgaaaaataattctaaacctagtttctcctatttatctcttcccttctattttatcttatttccacttaatccacta 9170  T
Q  162 aattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    || ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  9171 aactctctaaattctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 9233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 115; Significance: 3e-58; HSPs: 3)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 32 - 223
Target Start/End: Complemental strand, 21750 - 21556
Alignment:
Q  32 ctcttggttcttctctcctcttgttctcc-ctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    ||||||||||| |||| |||||||| ||  | ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||     
T  21750 ctcttggttctcctcttctcttgttttcttccttttctccaaaactggttgtacgtgaaaaataattctaaacctagtttctcctatttatctcttccct 21651  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||||| |||||||||| | ||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  21650 tctattttatcttatttccacttaatccactaaactatctaaattctcaaaacaaccccacaatcttaatcttatttctattttcaagacttatt 21556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 25173 - 25055
Alignment:
Q  107 tttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatt 204  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||| | |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||    
T  25173 tttctcctatttatctcttcccatctattttatcttatttcctctttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttatt 25074  T
Q  205 tctattttcaagacttattc 224  Q
    | |||||||||  |||||||    
T  25073 t-tattttcaaatcttattc 25055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 15986 - 15912
Alignment:
Q  107 tttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaa 180  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||| | |||| ||| ||||||||| ||||||    
T  15986 tttctcctatttatctcttcccatctattttatcttatttcctctttttcccacaaaactctctaaattctcaaa 15912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 28706 - 28519
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || | ||    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||   |||||    
T  28706 cccttaccttaagaaaatcgatcagcagctctctcttggttcttctctcctcttgttctccc-ttttctccaaaactggttgtacgtgaaaacttttcta 28608  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||| || ||||||| ||||||||||| ||||||||||||||||||||||||||| ||||| ||| ||||||| | ||||||||| ||||    
T  28607 aacttattttctccgatttatctcttcccatctattttatcttatttccactttttccacaaaactctctaatttctcaaaacaacccc 28519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 6 - 224
Target Start/End: Complemental strand, 54820 - 54599
Alignment:
Q  6 cttaccttaagaaaatcggtcggtagctct----tggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaa 101  Q
    |||||||||||||||||| || ||||||||    |||||||||| ||||||||||||||||||| | |||||| ||||||||||||||||   |||||||    
T  54820 cttaccttaagaaaatcgatcagtagctctctcttggttcttctatcctcttgttctccctttt-ctccaaaattggttgtacgtgaaaacttttctaaa 54722  T
Q  102 cctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tt 200  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||    
T  54721 cctattttctcctatttatctcttcccatctattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatt 54622  T
Q  201 tatttctattttcaagacttattc 224  Q
    ||||| |||||||||  |||||||    
T  54621 tattt-tattttcaaatcttattc 54599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 4 - 188
Target Start/End: Original strand, 1114 - 1301
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || | ||    ||||||||||||||||| ||||||||| || ||||| |||||||||||||||||||||| ||||||||    
T  1114 cccttaccttaagaaaatcgatcagcagctctctcttggttcttctctcttcttgttct-ccattttctccaaaactggttgtacgtgaaattaattcta 1212  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||  |   ||||| ||| ||||||||| | ||||||||||||    
T  1213 aacctagtttctcctatttatcacttcccatctattttatcttatttcctttaattccacaaaactctctaaattcacaaaacagcccc 1301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 108 - 224
Target Start/End: Complemental strand, 62225 - 62107
Alignment:
Q  108 ttctcctatttat--ctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttattt 205  Q
    |||||||||||||  ||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  62225 ttctcctatttatacctcctcccatctattttatcttatttccacttaatccactaaattctctaaatcctcaaaacagccccacaacttaatcttattt 62126  T
Q  206 ctattttcaagacttattc 224  Q
    |||||||||||||||||||    
T  62125 ctattttcaagacttattc 62107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 1156 - 1339
Alignment:
Q  32 ctcttggttcttctctcctcttgttctc-cctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctctttcca 129  Q
    |||||||||||||||| |||||||| || || ||||| ||||||||  ||||||||||||| |||||||||||||||||| ||||||||||||||| ||     
T  1156 ctcttggttcttctcttctcttgttttctcccttttctccaaaact--ttgtacgtgaaaaataattctaaacctagtttatcctatttatctcttccct 1253  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaa-cttaattttatttctattttcaagacttatt 223  Q
    ||||||||||||||||||||||| |||||||||| |         |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  1254 tctattttatcttatttccacttaatccactaaact---------ctcaaaacagccccacaatcttaatcttatttctattttcaagacttatt 1339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 118765 - 118578
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattcta 99  Q
    |||||||||||||||||||| || | ||    ||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||    
T  118765 cccttaccttaagaaaatcgatcagcagctctctcttggttcttctctcctcttgttctacc-ttttcgccaaaactggttgtacgtgaaaataattcta 118667  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||||||| |||||| ||| |||||| |||| ||||||||||  |   ||||| ||| ||||||||| | ||||||||||||    
T  118666 aacctagtttctcctttttatcacttcccatcttttttttcttatttcctttaattccacaaaactctctaaattcacaaaacagcccc 118578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 9875 - 10066
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||  ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||    
T  9875 ctcttggttctcttctcctcttgttctccctttt-ctccaaaactggttgtacgtgaaaataattctaa-cctattttctcctatttatctcttcccatc 9972  T
Q  132 tattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||||||||| |||| | |||| ||| || |||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  9973 tattttatcttatttcctctttttcccacaaaactcactaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 10066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 1632 - 1822
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||| ||||  ||||||||||||||||||||||||  ||||||| |||||||||||||||||||||| |||| |||||||||||||||| || |||||    
T  1632 ctcttgattctcttctcctcttgttctccctttttcc--aaaactgattgtacgtgaaaataattctaaccctattttctcctatttatctattcccatc 1729  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  1730 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 1822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 7284 - 7474
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||| ||||  ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||| |||||||||||||||| || ||||     
T  7284 ctcttgattctcttctcctcttgttctccctttttcc--aaaactgattgtacgtgaaaataattctaaacctattttctcctatttatctattcccata 7381  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  7382 tattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 7474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 220313 - 220122
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||||||||||| ||||||||||||| | |||||| || |||||||||||||||||| |||||||| |||||||||||||||||||||||      
T  220313 ctcttggttcttctctcctcctgttctccctttt-ctccaaaattgattgtacgtgaaaataattttaaacctattttctcctatttatctctttccaat 220215  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||| ||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  220214 tattttatcttttttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctaaatatttattt-tattttcaaatcttattc 220122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 98 - 221
Target Start/End: Original strand, 6471 - 6595
Alignment:
Q  98 taaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccaca-actta 196  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||| || |||||| |||||||||||||||||  ||||    
T  6471 taaacctagtttctcctatttatctcttcccttctattttatcttatttccacttaatccactaaactcactaaattctcaaaacagccccacactctta 6570  T
Q  197 attttatttctattttcaagactta 221  Q
    || ||||||||||||||||||||||    
T  6571 atcttatttctattttcaagactta 6595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 106159 - 106277
Alignment:
Q  108 ttctcctatttatctct--ttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttattt 205  Q
    ||||||||||||| |||  | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  106159 ttctcctatttatatctcctcccatctattttatcttatttccacttaatccactaaattctctaaatcctcaaaacagccccacaacttaatcttattt 106258  T
Q  206 ctattttcaagacttattc 224  Q
    ||||||||||  |||||||    
T  106259 ctattttcaaatcttattc 106277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 84; Significance: 9e-40; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 4 - 224
Target Start/End: Original strand, 447455 - 447677
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtagc---tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaat-aattcta 99  Q
    |||||||||||| ||||||| || | |||   ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| ||||||     
T  447455 cccttaccttaacaaaatcgatcagcagcctctcttggttcttctctcctcttgttctccctttt-ctacaaaactggttgtacgtgaaaataaattct- 447552  T
Q  100 aacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat- 198  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||||| ||||  |||| ||| ||||||||| || |||||| |||| || || |||     
T  447553 aacctattttctcctatttatctcttctcatctattttatcttatttcctcttttcccacaaaactctctaaattctaaaaacaacccctcatctcaata 447652  T
Q  199 tttatttctattttcaagacttattc 224  Q
    ||||||| |||||||||  |||||||    
T  447653 tttattt-tattttcaaatcttattc 447677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 498396 - 498586
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||||||||||| ||||||||||||| |  ||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||  ||||    
T  498396 ctcttggttcttctctcctcatgttctccctttt-cttcaaaattggttgtacgtgaaaataattctaa-cctattttctcctatttatctcttctcatc 498493  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
     |||||||| ||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  498494 cattttatcgtatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 498586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 224
Target Start/End: Original strand, 499135 - 499324
Alignment:
Q  33 tcttggttcttctctcctcttgtt-ctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||||| |||||||| ||||||||||| |||||||| |||  |||  ||||  ||||| | |||| |||||||||| ||| || | | | |    
T  499135 tcttggttcttctcttctcttgtttctccctttttctccaaaacttgtttcacgcaaaaactattctga-cctattttctcctatatatttcct-caacc 499232  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
       ||||||||||||||||||  ||||||||| ||||||||| ||||||||||| || || || ||| |||||| |||||||||  |||||||    
T  499233 gtctttatcttatttccacttattccactaaactctctaaattctcaaaacagcacctcatctcaatattattt-tattttcaaatcttattc 499324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 10411 - 10562
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagttt-ctcctatttatctctttcca 129  Q
    ||||||||||||||||||||| ||| |||||||||||  |||||| |||||||||||||| |||||||||||||||||| ||||||||||||| || |||    
T  10411 ctcttggttcttctctcctctagttatccctttttcc--aaaacttgttgtacgtgaaaaataattctaaacctagttttctcctatttatctattccca 10508  T
Q  130 tctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 183  Q
    |||||||||||||||||| |||||  |||| ||| ||||||||| |||||||||    
T  10509 tctattttatcttatttctacttttcccacaaaactctctaaattctcaaaaca 10562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 107 - 224
Target Start/End: Original strand, 7190 - 7307
Alignment:
Q  107 tttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttattt 205  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  7190 tttctcctatttatctcttcccatctattttatcttatttccacttaatccactaaattctctaaattctcaaaacagccccacaacttaatctttattt 7289  T
Q  206 ctattttcaagacttattc 224  Q
     |||||||||  |||||||    
T  7290 -tattttcaaatcttattc 7307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 17313 - 17122
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| |||||| ||||||   ||||||||||| ||||||||||||||||||| |||||    
T  17313 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactgattgtacatgaaaaaccttctaaacctattttctcctatttatctcttcccatc 17215  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||||||| | | |  ||||||||  ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  17214 tattttatcttatttactcctcttccactaatctctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 17122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 32 - 188
Target Start/End: Original strand, 4104 - 4259
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||   |||||||| || ||||||||||||||||||| |||||    
T  4104 ctcttggttcttctctcctcttgttctccctttt-ctccaaaactgattgtacgtgaaaaactttctaaacatattttctcctatttatctcttcccatc 4202  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||| ||||| | | |  ||||||||| ||||||||| ||||||||| ||||    
T  4203 tattttatcctatttactcctcttccactaaactctctaaattctcaaaacaacccc 4259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 23191 - 23309
Alignment:
Q  33 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagttt-ctcctatttatctctttccatc 131  Q
    ||||||||||||||||||||||||||||||||| | |||||||| ||||||| |||||| ||||||||||||||||| ||||| |||||||||| |||||    
T  23191 tcttggttcttctctcctcttgttctccctttt-ctccaaaacttgttgtacatgaaaacaattctaaacctagttttctcctgtttatctcttcccatc 23289  T
Q  132 tattttatcttatttccact 151  Q
    ||||||||||||||||||||    
T  23290 tattttatcttatttccact 23309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 53 - 224
Target Start/End: Original strand, 14336 - 14507
Alignment:
Q  53 tgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagttt-ctcctatttatctctttccatctattttatcttatttccact 151  Q
    ||||||||||||| | |||||||| |||||||||||||| |||  |||||||||||| |||||||||||||||| |||||||||||||||||||||| ||    
T  14336 tgttctccctttt-ctccaaaacttgttgtacgtgaaaacaataataaacctagttttctcctatttatctcttcccatctattttatcttatttcctct 14434  T
Q  152 ttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    || ||||||||| ||||||||| || |||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  14435 ttttccactaaactctctaaattcttaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 14507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 63 - 224
Target Start/End: Complemental strand, 191758 - 191597
Alignment:
Q  63 ttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaa 162  Q
    ||||| |||||| || ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||  |||| ||    
T  191758 ttttctccaaaattgattgtacgtgaaaataattctaaacctattttctcctatttatctcttcccatctattttatcttatttcctcttttcccacaaa 191659  T
Q  163 attctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    |||||||||||  |||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  191658 attctctaaattttcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 191597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 75004 - 74852
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag-tttctcctatttatctctttccat 130  Q
    |||||||||||||||| |||||||||||||||||  || ||||||| || |||||||||| | |||||||||||| ||||| ||||||||||||| || |    
T  75004 ctcttggttcttctcttctcttgttctcccttttctccaaaaactgattctacgtgaaaacatttctaaacctagttttctactatttatctcttcccgt 74905  T
Q  131 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 183  Q
    |||||||||||||||||| ||||  |||| ||| ||||||||| |||||||||    
T  74904 ctattttatcttatttcctcttttcccacaaaactctctaaattctcaaaaca 74852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 55 - 188
Target Start/End: Complemental strand, 1964 - 1829
Alignment:
Q  55 ttctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagttt-ctcctatttatctctttccatctattttatcttatttccactt 152  Q
    |||||||||| ||  ||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||    
T  1964 ttctccctttatcttcaaaagtggttgtacgtgaaaaataattctaaacctagttttctcctatttatctcttcccatctattttatcttatttcctctt 1865  T
Q  153 tatccactaaattctctaaatcctcaaaacagcccc 188  Q
    | ||||| ||| ||||||||| | ||||||||||||    
T  1864 tttccacaaaactctctaaattcacaaaacagcccc 1829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 224
Target Start/End: Original strand, 2686 - 2908
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtagc---tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaa 100  Q
    |||||||||||| ||||||| || | |||   |||||||||||||||||||||||||||||||||  || |||||||||||||||| |||| ||| || |    
T  2686 cccttaccttaacaaaatcgatcagcagcctctcttggttcttctctcctcttgttctcccttttctccaaaaactggttgtacgtaaaaacaatact-a 2784  T
Q  101 acctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-t 199  Q
    || || |||||||||||||||| || |||||||||||| ||||||||| |||| |||   ||| ||||||||| ||||||||| |||| || || ||| |    
T  2785 acatattttctcctatttatctattcccatctattttaacttatttcctctttttcccaaaaactctctaaattctcaaaacaacccctcatctcaatat 2884  T
Q  200 ttatttctattttcaagacttattc 224  Q
    |||||| |||||||||  |||||||    
T  2885 ttattt-tattttcaaatcttattc 2908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 32 - 188
Target Start/End: Complemental strand, 165592 - 165440
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||||||||||||||||||||||||   |||||||| |||  |||| |||| |||||||| |||| ||||||||||||||||||| |||||    
T  165592 ctcttggttcttctctcctcttgttctccctttt---ccaaaacttgtttcacgtaaaaacaattctaa-cctattttctcctatttatctcttcccatc 165497  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||||||| | | |  ||||||||| ||||||||| ||||||||| ||||    
T  165496 tattttatcttatttactcctcttccactaaactctctaaattctcaaaacaacccc 165440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 40 - 224
Target Start/End: Complemental strand, 13617 - 13431
Alignment:
Q  40 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatttatctctttccatctatttt 137  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||  ||||| | | |||  ||||||||||||||||||| |||||||||||    
T  13617 tcttctctcctcttgttctcccttttctcccaaaactggttgtacgtaaaaactattctga-cttaggttttctcctatttatctcttaccatctatttt 13519  T
Q  138 atcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||| |||| | |||| ||| ||||||||| ||| ||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  13518 atcttatttcctctttttcccacaaaactctctaaattctccaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 13431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 602 - 799
Alignment:
Q  32 ctcttggttcttctctcctcttg----ttctccctttttccccaaaactggttgtacgtgaaaa-taattctaaacctagtttctcctatttatctcttt 126  Q
    ||||||||||||| || ||||||    ||||||||||||| ||||||||| | ||||||||||| |||||||||||||| |||| |||||||||||| |     
T  602 ctcttggttcttcccttctcttggtttttctccctttttctccaaaactgatcgtacgtgaaaaataattctaaacctattttcccctatttatctcctc 701  T
Q  127 ccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    |||||||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  702 ccatctattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 32 - 173
Target Start/End: Complemental strand, 37261 - 37122
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||| ||||||||||||||| |||||||| | |||||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||    
T  37261 ctcttggtttttctctcctcttgttttccctttt-ctccaaaattggttgtacgtgaaaataattctaa-cctattttctcc-atttatctcttcccatc 37165  T
Q  132 tattttatcttatttccactttat-ccactaaattctctaaat 173  Q
    ||||||||||||||||| |||| | |||| ||| |||||||||    
T  37164 tattttatcttatttcctctttttcccacaaaactctctaaat 37122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 16409 - 16556
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||||||||||||||||||||||||   |||||||| |||  |||| |||| |||||||| |||| ||||||||||||||||||| |||||    
T  16409 ctcttggttcttctctcctcttgttctccctttt---ccaaaacttgtttcacgtaaaaacaattctaa-cctattttctcctatttatctcttcccatc 16504  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 183  Q
    |||||| |||||||| | | |  ||||||||| ||||||||| |||||||||    
T  16505 tattttttcttatttactcctcttccactaaactctctaaattctcaaaaca 16556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1835 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold1835
Description:

Target: scaffold1835; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 249 - 432
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaa-taattct 98  Q
    |||||||||||||||||||| || | ||    ||||| |||||||||| ||| ||||||||| ||||| ||||||||||||||||||||||| |  ||      
T  249 cccttaccttaagaaaatcgatcagaagctctctctttgttcttctcttctcgtgttctccc-ttttctccaaaactggttgtacgtgaaaactttttta 347  T
Q  99 aaacctagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaaca 183  Q
    ||||||| ||||| ||||||||||||| |||| ||||||||||||||||| ||||  |||| ||| ||||||||| |||||||||    
T  348 aaacctattttcttctatttatctcttcccatatattttatcttatttcctcttttcccacaaaactctctaaattctcaaaaca 432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 40 - 224
Target Start/End: Original strand, 22902 - 23088
Alignment:
Q  40 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatttatctctttccatctatttt 137  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||  ||||| | | |||  ||||||||||||||||||| |||||||||||    
T  22902 tcttctctcctcttgttctcccttttctcccaaaactggttgtacgtaaaaactattctga-cttaggttttctcctatttatctcttaccatctatttt 23000  T
Q  138 atcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||| |||| | |||| ||| ||||||||| ||| ||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  23001 atcttatttcctctttttcccacaaaactctctaaattctccaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 23088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 34 - 224
Target Start/End: Complemental strand, 1820 - 1631
Alignment:
Q  34 cttggttcttctctcctcttgtt--ctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||||  |||||||  ||||||||||| |||||||| |||  |||||||||   ||||||||||||||||||||||||||||| | | |||    
T  1820 cttggttcttctcttatcttgtttcctccctttttctccaaaacttgtttcacgtgaaaact-ttctaaacctagtttctcctatttatctc-tccaatc 1723  T
Q  132 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||| |||  ||||||||| || ||||||| | ||||||||||||||| || ||| |||||| |||||||||  |||||||    
T  1722 tattttatcttatttcctcttattccactaaactcttctaaattc-caaaacagccccacatctcaatattattt-tattttcaaatcttattc 1631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 40 - 224
Target Start/End: Complemental strand, 33639 - 33452
Alignment:
Q  40 tcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatt--tatctctttccatctatt 135  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||  ||||| ||| |||  |||||||||||  ||||||||||||||||||    
T  33639 tcttctctcctcttgttctcccttttctcccaaaactggttgtacgtaaaaactattct-aacttaggttttctcctatttatatctctttccatctatt 33541  T
Q  136 ttatcttatttccactttatcc-actaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    |||||||| |||| |||| ||| || ||| ||||||||| | |||||||||||| || || ||| ||||||| |||||||||  |||||||    
T  33540 ttatctta-ttcctctttttccaacaaaactctctaaattcacaaaacagcccctcatctcaatatttattt-tattttcaaatcttattc 33452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 205
Target Start/End: Complemental strand, 31338 - 31172
Alignment:
Q  42 ttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatttat--ctctttccatctatttt 137  Q
    ||||||||||||||||||||| ||  ||||||||| ||||||||| ||||  ||||| | | |||  ||||||||||||||  |||||||||||||||||    
T  31338 ttctctcctcttgttctccctcttctcccaaaactagttgtacgtaaaaactattctga-cttaggttttctcctatttatatctctttccatctatttt 31240  T
Q  138 atcttatttccactttatcc-actaaattctctaaatcctcaaaacagccccacaacttaattttattt 205  Q
    |||||||| || |||| ||| || | | ||||||||| | |||||||||||| || || ||| ||||||    
T  31239 atcttatt-cctctttttcccacaacactctctaaattcacaaaacagcccctcatctcaatattattt 31172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 8471 - 8659
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||||||||||||||| ||||||||   |||||||| |||  |||| |||| |||||||| |||| || ||||||||||||||||  ||||    
T  8471 ctcttggttcttctctcctcttgttatccctttt---ccaaaacttgtttcacgtaaaaacaattctaa-cctatttcctcctatttatctcttctcatc 8566  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||||||||||||| | | |  ||||||||| |||||||||  |||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  8567 tattttatcttatttactcctcttccactaaactctctaaattttcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 8659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 63 - 224
Target Start/End: Complemental strand, 203479 - 203318
Alignment:
Q  63 ttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattttatcttatttccac-tttatccacta 161  Q
    ||||| |||||||||   |||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||| | ||| ||||| |    
T  203479 ttttctccaaaactgaacgtacgtgaaaataattctaa-cctattttctcctatttatctcttcccatctattttatcttatttcctcttttttccacaa 203381  T
Q  162 aattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    || |||||||||  |||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  203380 aactctctaaattatcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 203318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 224
Target Start/End: Original strand, 79455 - 79579
Alignment:
Q  100 aacctagtttctcctatttatctctt-tccatctattttatcttatttccactttatccactaaat-tctctaaatcctcaaaacagccccacaacttaa 197  Q
    |||||||| |||||||||||| |||  || ||||||||||||||||| || |||| ||| | |||  ||||||||  ||||||| |||||||| ||||||    
T  79455 aacctagtctctcctatttatatctcctctatctattttatcttatt-cctctttttcccccaaaactctctaaaatctcaaaagagccccaccacttaa 79553  T
Q  198 ttttatttctattttcaagacttattc 224  Q
    | ||||| ||||| |||||||||||||    
T  79554 tcttatt-ctattatcaagacttattc 79579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 12470 - 12658
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    |||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||  ||| |  ||||| ||||||||||||||||| |  |  |    
T  12470 ctcttggttcttctctcctcttgttctcccttttt--ccaaaacttgttgtacgtaaaaactattat-gacctattttctcctatttatctcctcacccc 12566  T
Q  132 tattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    |  ||||||||||||||||||  ||||||||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  12567 t-ctttatcttatttccacttattccactaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 12658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 32 - 153
Target Start/End: Original strand, 1029 - 1150
Alignment:
Q  32 ctcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||| ||||| ||||  ||||||||||||||||   | ||||||| |||||||||||||   ||||||||||| ||||||||||||||||||| |||||    
T  1029 ctctttgttctcctcttttcttgttctcccttttctacaaaaactgcttgtacgtgaaaaactttctaaacctattttctcctatttatctcttcccatc 1128  T
Q  132 tattttatcttatttccacttt 153  Q
    |||| |||||||||||| ||||    
T  1129 tattctatcttatttcctcttt 1150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 33 - 188
Target Start/End: Original strand, 4939 - 5095
Alignment:
Q  33 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctct-ttccat 130  Q
    |||||||||||||||| ||||||||||||||||  ||||||| || |||||||||||||   |||||||||||||| || ||||||||| |||  || ||    
T  4939 tcttggttcttctctcttcttgttctcccttttctcccaaaagtgattgtacgtgaaaacttttctaaacctagttctcacctatttatatctcctctat 5038  T
Q  131 ctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||| ||||||| |||| |||| ||||| ||| ||||||||| | ||||||||||||    
T  5039 ctattctatctta-ttcctctttttccacaaaactctctaaattcacaaaacagcccc 5095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 33 - 224
Target Start/End: Complemental strand, 3982 - 3789
Alignment:
Q  33 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctct-ttccat 130  Q
    |||||||||||||||| ||||||||||||||||  ||||||| || |||||||||||||   || ||||||||||| || ||||||||| |||  || ||    
T  3982 tcttggttcttctctcttcttgttctcccttttctcccaaaagtgattgtacgtgaaaacttttttaaacctagttctcacctatttatatctcctctat 3883  T
Q  131 ctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    ||||| ||||||| |||| |||| | |||| ||| ||||||||| | |||||||||||| || || ||| ||||||| |||||||||  |||||||    
T  3882 ctattctatctta-ttcctctttttcccacaaaactctctaaattcacaaaacagcccctcatctcaatatttattt-tattttcaaatcttattc 3789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 18753 - 18671
Alignment:
Q  107 tttctcctatttatctctttccatctattttatcttatttccactttatc-cactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||| || ||| ||| ||||||||| ||||||||| ||||    
T  18753 tttctcctatttatctcttcccatctattttatcttatttcctctttttcgcacaaaactctctaaattctcaaaacaacccc 18671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 95 - 183
Target Start/End: Original strand, 4680 - 4769
Alignment:
Q  95 ttctaaacctagtttctcctatttatctctttccatctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaaca 183  Q
    ||||||||||| | ||||||||||||||||| |||||||||||||||||||||  |||| | |||| ||| ||||||||| |||||||||    
T  4680 ttctaaacctattctctcctatttatctcttcccatctattttatcttatttcgtctttttcccacaaaactctctaaattctcaaaaca 4769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 1502 - 1384
Alignment:
Q  107 tttctcctatttatctctttccatctattttatcttatttccac-tttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatt 204  Q
    ||||||||||||||||||| |||||||||||||||||||||  | ||| ||||| ||| ||||||||  ||||||||| |||| ||||| ||| ||||||    
T  1502 tttctcctatttatctcttcccatctattttatcttatttcatcttttttccacaaaagtctctaaaatctcaaaacaacccctcaactcaatatttatt 1403  T
Q  205 tctattttcaagacttattc 224  Q
    | |||||||||  |||||||    
T  1402 t-tattttcaaatcttattc 1384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 33 - 224
Target Start/End: Original strand, 2453 - 2648
Alignment:
Q  33 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatttat--ctctttcc 128  Q
    |||||||||||||||| ||||||||||||||||  ||||||| |  |||||||| ||||  ||| | | | |||  ||||||||||||||  ||||||||    
T  2453 tcttggttcttctctcttcttgttctcccttttctcccaaaagttattgtacgtaaaaactattttga-cttaggttttctcctatttatatctctttcc 2551  T
Q  129 atctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    || ||||||||||||||||| |||| | |||| ||| ||||||||  ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  2552 atttattttatcttatttcctctttttcccacaaaactctctaaaatctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 2648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 188
Target Start/End: Original strand, 2254 - 2413
Alignment:
Q  33 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctag--tttctcctatttat--ctctttcc 128  Q
    |||||||||||||||| ||||||||||||||||  ||||||| |  |||||||| ||||  ||| | | | |||  ||||||||||||||  ||||||||    
T  2254 tcttggttcttctctcttcttgttctcccttttctcccaaaagttattgtacgtaaaaactattttga-cttaggttttctcctatttatatctctttcc 2352  T
Q  129 atctattttatcttatttccactttat-ccactaaattctctaaatcctcaaaacagcccc 188  Q
    || ||||||||||||||||| |||| | |||| ||| ||||||||  ||||||||| ||||    
T  2353 atttattttatcttatttcctctttttcccacaaaactctctaaaatctcaaaacaacccc 2413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 22364 - 22435
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacag-ccccacaacttaattttattt 205  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||| |||||||||||||| ||||||    
T  22364 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcccccacaacttaatcttattt 22435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 188
Target Start/End: Original strand, 31188 - 31344
Alignment:
Q  35 ttggttcttctctcctcttgtt--ctccctttttccccaaaa-ctggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| | |||| ||||||||||  ||||||| | | ||||||||||||||| ||  || | |    
T  31188 ttggttcttctcttctcttgttttctccctttttctccaaaaacaggttctacgtgaaaactattctaacctttgtttctcctatttatttc-ctcaacc 31286  T
Q  132 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagcccc 188  Q
       ||||||||||||||||||  ||||||||| || ||||||| ||||||||||||||    
T  31287 ctctttatcttatttccacttattccactaaactcttctaaattctcaaaacagcccc 31344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 134 - 224
Target Start/End: Original strand, 56120 - 56209
Alignment:
Q  134 ttttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    |||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  56120 ttttatcttatttccacttattccactaaactctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaaatcttattc 56209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 145
Target Start/End: Original strand, 98021 - 98135
Alignment:
Q  33 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctct-ttccat 130  Q
    |||||||||||||||| ||||||||||||||||  ||||||| || |||||||||||||   || ||||||||||| || ||||||||| |||  || ||    
T  98021 tcttggttcttctctcttcttgttctcccttttctcccaaaagtgattgtacgtgaaaacttttttaaacctagttctcacctatttatatctcctctat 98120  T
Q  131 ctattttatcttatt 145  Q
    ||||| |||||||||    
T  98121 ctattctatcttatt 98135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 145
Target Start/End: Original strand, 107299 - 107413
Alignment:
Q  33 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaataattctaaacctagtt-tctcctatttatctct-ttccat 130  Q
    |||||||||||||||| ||||||||||||||||  ||||||| || |||||||||||||   || ||||||||||| || ||||||||| |||  || ||    
T  107299 tcttggttcttctctcttcttgttctcccttttctcccaaaagtgattgtacgtgaaaacttttttaaacctagttctcacctatttatatctcctctat 107398  T
Q  131 ctattttatcttatt 145  Q
    ||||| |||||||||    
T  107399 ctattctatcttatt 107413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 7459 - 7538
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaa 215  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||    
T  7459 tttatcttatttccacttattccactaaactctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaa 7538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 215
Target Start/End: Complemental strand, 158779 - 158603
Alignment:
Q  40 tcttctctcctcttg--ttctccctttt-tccccaaaactggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatctattt 136  Q
    |||||||| ||||||  ||||||||||| |||| ||||||| ||  |||| ||||  ||||| |  |||||||||||||||||| || ||  | ||| ||    
T  158779 tcttctcttctcttggtttctcccttttctcccaaaaactgttttcacgtaaaaactattctgactctagtttctcctatttatttcctta-acctactt 158681  T
Q  137 tatcttatttccactttatccactaaattct-ctaaatcctcaaaacagccccacaacttaattttatttctattttcaa 215  Q
    |||||||||| |||||  ||||||||| ||| |||||| | |||||||||||||||||||||| |||||| |||||||||    
T  158680 tatcttattttcacttattccactaaactcttctaaattc-caaaacagccccacaacttaatattattt-tattttcaa 158603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 111513 - 111631
Alignment:
Q  104 tagtttctcctatttatctctttccatctattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaatttta 202  Q
    ||||||||||||||||| || | | | ||| |||||||||||||||||| |||||||||| || ||||||| | |||||||||||| ||||| ||| |||    
T  111513 tagtttctcctatttatttcct-caacctactttatcttatttccacttaatccactaaactcttctaaattc-caaaacagcccctcaactcaatatta 111610  T
Q  203 tttctattttcaagacttattc 224  Q
    ||| |||||||||  |||||||    
T  111611 ttt-tattttcaaatcttattc 111631  T

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Target: scaffold0037 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 81609 - 81673
Alignment:
Q  4 cccttaccttaagaaaatcggtcggtag----ctcttggttcttctctcctcttgttctcccttt 64  Q
    |||||||||||||||||||| || | ||    |||||||||||||||||||||||||||||||||    
T  81609 cccttaccttaagaaaatcgatcagcagctctctcttggttcttctctcctcttgttctcccttt 81673  T

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Target: scaffold0396 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 3553 - 3650
Alignment:
Q  127 ccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    |||||||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  3553 ccatctattttatcttatttcctcttttcccacaaaactctctaaattctcaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 3650  T

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Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 23075 - 23026
Alignment:
Q  42 ttctctcctcttgttctccctttttccccaaaactggttgtacgtgaaaat 92  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| |||||    
T  23075 ttctctcctcttgttctccc-ttttctccaaaactggttgtacgtaaaaat 23026  T

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Target: scaffold0848 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 1891 - 1803
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    |||||||||||| |||||  ||||| ||| ||||||||| |||||||||||||| || || ||| |||||| |||||||||  |||||||    
T  1891 tttatcttattttcacttattccaccaaactctctaaattctcaaaacagcccctcatctcaatattattt-tattttcaaatcttattc 1803  T

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Target: scaffold0589 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 205
Target Start/End: Original strand, 4465 - 4638
Alignment:
Q  35 ttggttcttctctcctcttgtt--ctccctttttccccaaaa-ctggttgtacgtgaaaataattctaaacctagtttctcctatttatctctttccatc 131  Q
    ||||||||||||| ||||||||  |||| |||||| |||||| || ||| ||||||||||  ||||| |  ||| |||||||||||||| || | | | |    
T  4465 ttggttcttctcttctcttgttttctccatttttctccaaaaacttgttttacgtgaaaactattctgactctactttctcctatttatttcct-caacc 4563  T
Q  132 tattttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaacttaattttattt 205  Q
       ||||||||||||||||||  ||||||||| || ||||||| | |||||||| |||||||||||||| ||||||    
T  4564 ctctttatcttatttccacttattccactaaactcttctaaattc-caaaacagcccccacaacttaatcttattt 4638  T

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Target: scaffold0379 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 3766 - 3687
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaattttatttctattttcaa 215  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||||||| ||| | || || ||| |||||| |||||||||    
T  3766 tttatcttatttccacttattccactaaactctctaaattctcaaaactgcctctcatctcaatattattt-tattttcaa 3687  T

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Target: scaffold0042 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 224
Target Start/End: Original strand, 29569 - 29659
Alignment:
Q  134 ttttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 224  Q
    |||||||||||||||||||  ||||||||| || ||||||| | |||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  29569 ttttatcttatttccacttattccactaaactcttctaaattc-caaaacagcccccacaacttaatcttattt-tattttcaaatcttattc 29659  T

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Target: scaffold0192 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 10936 - 11017
Alignment:
Q  108 ttctcctatttatctct--ttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    ||||||||||||| |||  | ||||||||||||||||||| ||||||   |||||||| ||||||||| | ||||||||||||    
T  10936 ttctcctatttatatctcctcccatctattttatcttatt-ccacttataccactaaactctctaaattcacaaaacagcccc 11017  T

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Target: scaffold0075 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 61067 - 61156
Alignment:
Q  135 tttatcttatttccactttatccactaaattc-tctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  ||||||||| || ||||||| | |||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  61067 tttatcttatttccacttattccactaaactcttctaaattc-caaaacagtccccacaacttaatcttattt-tattttcaaatcttattc 61156  T

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Target: scaffold0434 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 5954 - 5900
Alignment:
Q  33 tcttggttcttctctcctcttgttctccctttttccccaaaactggttgtacgtg 87  Q
    |||||||||||||||| ||||||| ||||||||  ||||||| || |||||||||    
T  5954 tcttggttcttctctcttcttgttttcccttttctcccaaaagtgattgtacgtg 5900  T

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Target: scaffold0321 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 215 - 126
Alignment:
Q  135 tttatcttatttccactttatccactaaattctctaaatcctcaaaacag-ccccacaacttaattttatttctattttcaagacttattc 224  Q
    ||||||||||||||||||  ||||||||| ||| | |||   |||||||| |||||||||||||| |||||| |||||||||  |||||||    
T  215 tttatcttatttccacttattccactaaactcttttaatttccaaaacagcccccacaacttaatcttattt-tattttcaaatcttattc 126  T

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Target: scaffold0261 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 17373 - 17304
Alignment:
Q  118 tatctctttccatctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagcccc 188  Q
    |||||| | ||||||||||||||||||| ||||||   |||||||| ||||||||| | ||||||||||||    
T  17373 tatctcctcccatctattttatcttatt-ccacttataccactaaaatctctaaattcacaaaacagcccc 17304  T

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Target: scaffold0056 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 67303 - 67391
Alignment:
Q  135 tttatcttatttccactttatccactaaattc-tctaaatcctcaaaacagccccacaacttaattttatttctattttcaagacttattc 224  Q
    |||||||||||||||||| |||||||||| || ||||||| |  |||||| |||| ||||||||| |||||| |||||||||  |||||||    
T  67303 tttatcttatttccacttaatccactaaactcttctaaattc-aaaaacaacccctcaacttaatattattt-tattttcaaatcttattc 67391  T

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Target: scaffold0074 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 224
Target Start/End: Original strand, 9233 - 9329
Alignment:
Q  128 catctattttatcttatttccactttatccactaaattctctaaatcctcaaaacagccccacaacttaat-tttatttctattttcaagacttattc 224  Q
    |||||||||||||||||||| |||||  |||| ||| ||||||||| || |||||| |||| || || ||| ||||||| |||||||||  |||||||    
T  9233 catctattttatcttatttctacttttcccacaaaactctctaaattcttaaaacaacccctcatctcaatatttattt-tattttcaaatcttattc 9329  T

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