View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14505_low_8 (Length: 254)
Name: NF14505_low_8
Description: NF14505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14505_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 13919954 - 13919718
Alignment:
| Q |
1 |
catgtagaacatgtatgataaaaggnnnnnnngggtattgaaatttgcaacaaaagctgaaatagcaataccttgtacaccaaggtgaagtttgaaggtt |
100 |
Q |
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| T |
13919954 |
catgtagaacatgtatgataaaaggaaaaaaagggtattgaaatttgcaacaaaagctgaaatagcaataccttgtacaccaaggtgaagtttgaaggtt |
13919855 |
T |
|
| Q |
101 |
aagaaaatgatgatagggatgtgaatgataacggaaagtgaagtgcaccacaataaaggccaagttgttcctttgctacgtaaatagatacgaatcggat |
200 |
Q |
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| T |
13919854 |
aagaaaatgatgatagggatgtgaatgataacggaaagtgaagtgcaccacaataatggccaagttgttcctttgctacgtaaatagatacgaatcggat |
13919755 |
T |
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| Q |
201 |
gaaggaagctattcgcgataagatcgggaatcgagag |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
13919754 |
gaaggaagctattcgcgataagatcgggaatcgagag |
13919718 |
T |
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