View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14506_high_41 (Length: 226)
Name: NF14506_high_41
Description: NF14506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14506_high_41 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 28470821 - 28471017
Alignment:
| Q |
14 |
cagagaagagaaacatgatatcaaatcaaatcatatatattaccccacatagtttctatgtatattctcagataaatattttcagctttgttcccttact |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28470821 |
cagagaagagaaacatgatatcaaatcaaatcatatatattaccccacatagtttctatgtatattctcagataaatattttcagctttgttcccttact |
28470920 |
T |
|
| Q |
114 |
gatgaaacagtacaatctattttgttttagttctcacaagnnnnnnnggtaagaaattaagaagaaaccaatcatatgataattaaatggacatggt |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28470921 |
gatgaaacagtacaatctattttgttttagttctcacaagaaaaaaaggtaagaaattaagaagaaaccaatcatatgataattaaatggacatggt |
28471017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University