View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14506_low_44 (Length: 234)
Name: NF14506_low_44
Description: NF14506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14506_low_44 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 33086981 - 33087208
Alignment:
| Q |
1 |
tagagagtgtgagaaataaataaggtggaaaaagaaggagtctctcaacaatacacgcacaacataagataagttggatttttaccacacataagactca |
100 |
Q |
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| T |
33086981 |
tagagaatgcgagaaataaataaggtggaaaaagaagaagtctctcaacaatacac--acaacataagataagttggatttttaccacacataagactca |
33087078 |
T |
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| Q |
101 |
tgaagtgtgtatgaattgggatatagtgacaaatgatatggagaaaattaaacttcgagtctcacatttattaattgataaggctttaaagagtttatat |
200 |
Q |
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| T |
33087079 |
tgaagtgtgtatgaattgggatatagtgacaaatgatatggagaa----aaacttcgagtctcacatttattaattgataaggcttgaaagagtttatat |
33087174 |
T |
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| Q |
201 |
ggagtgacactcatcatattacaaatcaattttt |
234 |
Q |
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| T |
33087175 |
ggagtgacactcatcatattataaatcaattttt |
33087208 |
T |
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