View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14506_low_51 (Length: 223)
Name: NF14506_low_51
Description: NF14506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14506_low_51 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 37210682 - 37210889
Alignment:
| Q |
16 |
agaacagtatcataatgcaatcagatgaaaaacttatcaatcagaagaaacctagtgactctgtttcatcctagacataattaattcctctagatagatt |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37210682 |
agaacagtatcataatgcaatcagatgaaaaacttatcaatcagaagaaacctagtgactctgtttcatcctagacataattaattcctctagatagatt |
37210781 |
T |
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| Q |
116 |
gtgcaaagtattgtgttgtgtactcaataagattcatcataataatgtcttctaaaacaaattatgttctagcatgttgaaaactatatgatcagtgtat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37210782 |
gtgcaaagtattgtgttgtgtactcaataagattcatcataataatgtcttctaaaacaaattatgttctagcatgttgaaaactatatgatcagtgtat |
37210881 |
T |
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| Q |
216 |
gaaaggat |
223 |
Q |
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|||||||| |
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| T |
37210882 |
gaaaggat |
37210889 |
T |
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