View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14507_low_11 (Length: 398)

Name: NF14507_low_11
Description: NF14507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14507_low_11
NF14507_low_11
[»] chr1 (29 HSPs)
chr1 (14-222)||(50767522-50767747)
chr1 (223-391)||(20302198-20302367)
chr1 (223-391)||(51752104-51752273)
chr1 (223-391)||(13761577-13761745)
chr1 (223-391)||(51749778-51749947)
chr1 (251-391)||(6823651-6823792)
chr1 (223-391)||(10400201-10400369)
chr1 (231-370)||(16225895-16226034)
chr1 (223-365)||(47179428-47179570)
chr1 (256-391)||(28840451-28840586)
chr1 (223-370)||(47177078-47177224)
chr1 (256-391)||(15823319-15823454)
chr1 (256-391)||(28842266-28842401)
chr1 (223-340)||(6822775-6822893)
chr1 (223-361)||(23783238-23783376)
chr1 (222-328)||(20291279-20291386)
chr1 (251-340)||(16231369-16231458)
chr1 (256-391)||(13214854-13214989)
chr1 (256-391)||(3579991-3580126)
chr1 (326-370)||(23783362-23783406)
chr1 (280-391)||(41646717-41646828)
chr1 (223-305)||(47451405-47451488)
chr1 (276-365)||(30790793-30790882)
chr1 (330-386)||(28207444-28207500)
chr1 (275-391)||(39462310-39462426)
chr1 (256-340)||(49687334-49687418)
chr1 (256-305)||(38925915-38925965)
chr1 (316-365)||(13449947-13449996)
chr1 (343-391)||(47451508-47451556)
[»] chr4 (39 HSPs)
chr4 (225-391)||(51015042-51015208)
chr4 (223-391)||(11006612-11006781)
chr4 (223-391)||(9176867-9177035)
chr4 (231-391)||(37089745-37089906)
chr4 (223-370)||(16932213-16932360)
chr4 (221-370)||(22783170-22783319)
chr4 (231-391)||(24888598-24888758)
chr4 (223-391)||(9174517-9174684)
chr4 (221-365)||(16934572-16934716)
chr4 (223-378)||(36919971-36920125)
chr4 (225-391)||(22803104-22803270)
chr4 (223-391)||(38408993-38409161)
chr4 (223-391)||(5637839-5638006)
chr4 (220-391)||(36921866-36922036)
chr4 (223-370)||(22780805-22780952)
chr4 (256-391)||(22044760-22044897)
chr4 (223-391)||(3824944-3825112)
chr4 (260-391)||(31849970-31850101)
chr4 (223-340)||(7941133-7941251)
chr4 (280-391)||(11008963-11009075)
chr4 (223-340)||(11434769-11434887)
chr4 (223-365)||(18846923-18847067)
chr4 (275-391)||(5198266-5198382)
chr4 (256-391)||(48486146-48486281)
chr4 (256-361)||(9148087-9148192)
chr4 (256-340)||(22801262-22801346)
chr4 (277-391)||(24880299-24880413)
chr4 (256-361)||(52942869-52942974)
chr4 (310-391)||(22047055-22047135)
chr4 (277-391)||(619818-619932)
chr4 (328-391)||(52942818-52942881)
chr4 (254-391)||(40091786-40091923)
chr4 (276-391)||(24878836-24878951)
chr4 (256-306)||(22048492-22048542)
chr4 (349-391)||(47274647-47274689)
chr4 (316-365)||(16689331-16689380)
chr4 (317-365)||(8529012-8529060)
chr4 (347-391)||(11434873-11434917)
chr4 (347-391)||(22801232-22801276)
[»] chr2 (18 HSPs)
chr2 (231-391)||(19502382-19502542)
chr2 (231-391)||(27104523-27104683)
chr2 (222-387)||(19504720-19504885)
chr2 (223-370)||(24162604-24162752)
chr2 (223-370)||(36559211-36559358)
chr2 (256-391)||(21521066-21521201)
chr2 (223-361)||(36561539-36561677)
chr2 (223-370)||(45332528-45332675)
chr2 (256-391)||(42064264-42064399)
chr2 (256-391)||(6259186-6259321)
chr2 (231-340)||(43623968-43624077)
chr2 (315-391)||(13910415-13910491)
chr2 (256-391)||(22407780-22407915)
chr2 (326-370)||(36561488-36561532)
chr2 (275-340)||(6264546-6264611)
chr2 (256-341)||(40032468-40032553)
chr2 (347-391)||(43623938-43623982)
chr2 (326-361)||(36561518-36561553)
[»] chr3 (36 HSPs)
chr3 (223-391)||(22114674-22114842)
chr3 (223-363)||(6063866-6064006)
chr3 (223-370)||(18099560-18099707)
chr3 (224-391)||(5191374-5191541)
chr3 (222-370)||(50493675-50493823)
chr3 (223-370)||(38210067-38210214)
chr3 (239-352)||(10192401-10192513)
chr3 (223-364)||(53896613-53896754)
chr3 (240-372)||(5899476-5899608)
chr3 (239-352)||(10085481-10085593)
chr3 (282-391)||(10956396-10956505)
chr3 (223-354)||(18097291-18097422)
chr3 (222-340)||(38889756-38889875)
chr3 (223-372)||(5885983-5886133)
chr3 (280-372)||(25388654-25388746)
chr3 (222-391)||(32264412-32264581)
chr3 (223-340)||(35777163-35777280)
chr3 (256-391)||(1321194-1321329)
chr3 (256-391)||(5522984-5523119)
chr3 (256-340)||(11162924-11163008)
chr3 (256-391)||(26720301-26720436)
chr3 (316-391)||(10958692-10958767)
chr3 (256-338)||(11170178-11170260)
chr3 (223-340)||(6719532-6719651)
chr3 (223-306)||(7606880-7606963)
chr3 (256-391)||(24177032-24177167)
chr3 (281-340)||(6066195-6066254)
chr3 (325-391)||(3859350-3859416)
chr3 (316-391)||(45882752-45882827)
chr3 (221-271)||(3859315-3859365)
chr3 (347-391)||(35777266-35777309)
chr3 (316-365)||(4308676-4308725)
chr3 (346-391)||(10084762-10084807)
chr3 (346-391)||(10191682-10191727)
chr3 (347-391)||(6719502-6719546)
chr3 (347-391)||(38889861-38889905)
[»] scaffold0127 (1 HSPs)
scaffold0127 (223-370)||(12907-13054)
[»] chr6 (16 HSPs)
chr6 (223-391)||(14507546-14507716)
chr6 (256-391)||(19227780-19227915)
chr6 (223-370)||(26068735-26068882)
chr6 (256-391)||(8995288-8995423)
chr6 (256-391)||(9019735-9019870)
chr6 (223-370)||(26066464-26066611)
chr6 (223-370)||(33308685-33308832)
chr6 (223-370)||(33310954-33311101)
chr6 (223-370)||(29755132-29755279)
chr6 (231-391)||(11983400-11983558)
chr6 (280-391)||(4816639-4816749)
chr6 (256-372)||(15530512-15530628)
chr6 (306-391)||(30729199-30729284)
chr6 (316-365)||(26084818-26084867)
chr6 (275-340)||(32279845-32279910)
chr6 (306-391)||(15541511-15541596)
[»] chr5 (37 HSPs)
chr5 (223-370)||(34477485-34477632)
chr5 (256-391)||(38881878-38882013)
chr5 (223-340)||(2174680-2174797)
chr5 (223-391)||(31544798-31544966)
chr5 (223-370)||(10749505-10749652)
chr5 (231-372)||(4236378-4236519)
chr5 (223-391)||(31542442-31542610)
chr5 (223-370)||(10756960-10757107)
chr5 (223-370)||(15354918-15355065)
chr5 (223-370)||(15357194-15357341)
chr5 (223-340)||(34479855-34479972)
chr5 (223-340)||(39797849-39797966)
chr5 (256-391)||(16775930-16776065)
chr5 (222-340)||(25921874-25921993)
chr5 (222-370)||(23664833-23664981)
chr5 (222-370)||(23793606-23793754)
chr5 (223-370)||(23667109-23667256)
chr5 (280-370)||(31179807-31179897)
chr5 (314-391)||(21684832-21684909)
chr5 (256-340)||(659746-659829)
chr5 (223-340)||(38960487-38960604)
chr5 (278-358)||(659850-659929)
chr5 (256-391)||(21947803-21947935)
chr5 (221-321)||(18186489-18186589)
chr5 (223-340)||(31466379-31466496)
chr5 (256-340)||(2818729-2818813)
chr5 (256-359)||(20504316-20504419)
chr5 (256-391)||(20507833-20507968)
chr5 (223-287)||(21684905-21684969)
chr5 (223-321)||(36402747-36402845)
chr5 (316-365)||(39854317-39854366)
chr5 (316-365)||(42238047-42238096)
chr5 (316-364)||(1240171-1240219)
chr5 (316-372)||(4409890-4409946)
chr5 (256-339)||(12556325-12556408)
chr5 (223-271)||(31179885-31179933)
chr5 (351-391)||(39797956-39797996)
[»] chr8 (15 HSPs)
chr8 (223-370)||(18812668-18812815)
chr8 (223-370)||(43079347-43079494)
chr8 (223-362)||(43081722-43081861)
chr8 (256-391)||(27826815-27826950)
chr8 (256-391)||(27829126-27829261)
chr8 (256-391)||(12517397-12517532)
chr8 (223-370)||(18810483-18810630)
chr8 (223-391)||(44720617-44720785)
chr8 (231-391)||(14807556-14807716)
chr8 (231-391)||(15067785-15067945)
chr8 (256-361)||(28251988-28252093)
chr8 (223-391)||(15072506-15072674)
chr8 (251-340)||(3886322-3886412)
chr8 (256-340)||(4423868-4423952)
chr8 (326-391)||(28251937-28252002)
[»] chr7 (20 HSPs)
chr7 (223-391)||(3878322-3878490)
chr7 (223-370)||(1047356-1047503)
chr7 (223-370)||(2935070-2935217)
chr7 (223-370)||(9027540-9027687)
chr7 (223-370)||(22136878-22137025)
chr7 (223-370)||(40551905-40552052)
chr7 (222-391)||(27306600-27306768)
chr7 (223-370)||(22107867-22108014)
chr7 (223-370)||(40549627-40549774)
chr7 (223-340)||(40837144-40837261)
chr7 (256-391)||(35412-35547)
chr7 (256-391)||(44347-44482)
chr7 (260-391)||(25542317-25542448)
chr7 (223-340)||(26804345-26804462)
chr7 (256-391)||(18567396-18567531)
chr7 (256-391)||(31435418-31435553)
chr7 (256-337)||(1049699-1049780)
chr7 (347-391)||(26804448-26804492)
chr7 (316-365)||(40946167-40946216)
chr7 (310-391)||(42006404-42006484)
[»] scaffold0250 (1 HSPs)
scaffold0250 (264-391)||(2670-2797)
[»] scaffold0140 (2 HSPs)
scaffold0140 (223-370)||(21915-22062)
scaffold0140 (223-370)||(24190-24337)
[»] scaffold0025 (2 HSPs)
scaffold0025 (231-391)||(69665-69825)
scaffold0025 (231-340)||(73427-73536)
[»] scaffold0472 (1 HSPs)
scaffold0472 (223-370)||(5927-6074)
[»] scaffold0068 (2 HSPs)
scaffold0068 (314-391)||(29001-29078)
scaffold0068 (223-287)||(28941-29005)
[»] scaffold0131 (1 HSPs)
scaffold0131 (224-391)||(14768-14936)
[»] scaffold0339 (1 HSPs)
scaffold0339 (349-391)||(3872-3914)


Alignment Details
Target: chr1 (Bit Score: 145; Significance: 3e-76; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 14 - 222
Target Start/End: Original strand, 50767522 - 50767747
Alignment:
Q  14 agtggcctggtgtggataatgaaatatgaatgaatggaatgagatagatggtgcatttttaaattgtacagatgaaaacaaaagacaaatggaataagga 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50767522 agtggcctggtgtggataatgaaatatgaatgaatggaatgagatagatggtgcatttttaaattgtacagatgaaaacaaaagacaaatggaataagga 50767621  T
Q  114 cgaaatattcatgaaaaata-----------------tcacaagggataccgtcataacatgttacattagtagnnnnnnngtaaattcacaaacatctt 196  Q
    ||||||||||||||||||||                 ||||||||||||||||||||||||||||||||| |||       |||||||||||||||||||    
T  50767622 cgaaatattcatgaaaaatatctctctcaggacgccttcacaagggataccgtcataacatgttacattactagtttttttgtaaattcacaaacatctt 50767721  T
Q  197 tctctaactatataaaagttaattaa 222  Q
    ||||||||||||||||||||||||||    
T  50767722 tctctaactatataaaagttaattaa 50767747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 223 - 391
Target Start/End: Original strand, 20302198 - 20302367
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttt-tgaggcaaggcactgg 321  Q
    ||||||| ||||||| ||||||||||| |||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20302198 tgtgagagttaacttaaaatcagatttctgcagaatcgcggcatgatggcaaggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactgg 20302297  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||| || ||||||| |||||||||    
T  20302298 aaaaattgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacatatt 20302367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 223 - 391
Target Start/End: Original strand, 51752104 - 51752273
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttt-tgaggcaaggcactgg 321  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51752104 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggttgggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactgg 51752203  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||| || |||||||||||| ||||    
T  51752204 aaaaatcgtggcacgatggggccgcatcgtggcacgatggtgcgctggcggcgaataacataaacgtatt 51752273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 223 - 391
Target Start/End: Original strand, 13761577 - 13761745
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||    
T  13761577 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcatgatggaggtttcagtttttgaggcaaggcactgga 13761676  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||||||||||| |||||||||||| | |||| || ||||||| |||| ||||    
T  13761677 aaaatcgtggcacgatggggtcgcatcgcggcacgatggtgtgctggcggcgaataacagaaacgtatt 13761745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 223 - 391
Target Start/End: Original strand, 51749778 - 51749947
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttt-tgaggcaaggcactgg 321  Q
    ||||||| ||||||| ||||||  ||| |||| ||||||||||||||||   |||||||||| |||||||||||||||||||| ||||||||||||||||    
T  51749778 tgtgagagttaacttaaaatcaagtttctgcagaatcgtggcacgatggttgggcaacgtggtacgatggaggtttcagttttttgaggcaaggcactgg 51749877  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||| |||| ||||    
T  51749878 aaaaatcgtggcacgatggggtcgcatcgtggcacgatagtgcgctggcggcgaataacagaaacgtatt 51749947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 251 - 391
Target Start/End: Original strand, 6823651 - 6823792
Alignment:
Q  251 tgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttt-tgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatc 349  Q
    |||| |||| |||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  6823651 tgcagaatcatggcacgatggttgggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactggaaaaatcgtggcatgatggggtcgcatc 6823750  T
Q  350 gtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||| |||| || |||||||||||| ||||    
T  6823751 gtggcacgatggtgcgctggcggcgaataacataaacgtatt 6823792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 223 - 391
Target Start/End: Complemental strand, 10400369 - 10400201
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 321  Q
    ||||||| ||||||| ||||||| ||| |||  |||||||||||||| ||  |||||||||||||||| ||||||||||  ||| ||||||| |||||||    
T  10400369 tgtgagagttaacttaaaatcaggtttctgcggaatcgtggcacgattgctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactgg 10400271  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  10400270 aaatatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcaaataacataaacgtatt 10400201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 231 - 370
Target Start/End: Original strand, 16225895 - 16226034
Alignment:
Q  231 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgt 330  Q
    ||||||| ||||||| ||| |||| ||||||||||||| ||   |||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  16225895 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggttgggcaacgtggcacgatggaggttttagttttttgggcaaggcactggaaaaatcgt 16225994  T
Q  331 ggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  16225995 ggcacgatggggtcgcatcgtggcacgatggtgcgctggc 16226034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 223 - 365
Target Start/End: Original strand, 47179428 - 47179570
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||||||||||||||||||||| |||||||  |||||||||||| |    
T  47179428 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgaa 47179527  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 365  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  47179528 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcg 47179570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 28840451 - 28840586
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  28840451 aatcgtggcacgatggcaaggcaacgtggcacgattggaggtttcagttttt-aggcaaggtactggaaaaattgtggcacgatgggatcgcatcgtggc 28840549  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||| | ||||||| || |||| |||||||||    
T  28840550 acgatggtgtgctggcagcgaaaaacagaaacatatt 28840586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 47177078 - 47177224
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| | |  |||||||||||||||||||||||| |||||||| |||||| |||||||    
T  47177078 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacgactgggcaacgtggcacgatggaggttttagtttttg-ggcaagacactgga 47177176  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  47177177 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggc 47177224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 15823319 - 15823454
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||  ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  15823319 aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactagaaaaatcgtggcacgatggggtcgcatcgtggc 15823417  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||| | ||||||||||||| |||||||||    
T  15823418 acgatggtgcgctagcagcaaataacagaaacatatt 15823454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 28842266 - 28842401
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  28842266 aatcgtggcacgatggcaaggctacgtggcacgattggaggtttcagttttt-aggcaaggtactggaaaaatcgtggcacgatgggatcgcatcgtggc 28842364  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||   ||||||| || |||| |||||||||    
T  28842365 acgatggtgtcctggcagcgaaaaacagaaacatatt 28842401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 223 - 340
Target Start/End: Original strand, 6822775 - 6822893
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcag-tttttgaggcaaggcactgg 321  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6822775 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactgg 6822874  T
Q  322 aaaaatcgtggcacgatgg 340  Q
    |||||||||||||||||||    
T  6822875 aaaaatcgtggcacgatgg 6822893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 223 - 361
Target Start/End: Original strand, 23783238 - 23783376
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  23783238 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 23783337  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatgg 361  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23783338 aaaatcgtggcacgatggggtcgcatcgtggcacgatgg 23783376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 222 - 328
Target Start/End: Original strand, 20291279 - 20291386
Alignment:
Q  222 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcag-tttttgaggcaaggcactg 320  Q
    |||||||| ||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  20291279 atgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatggcaaggcaacgtggcacggtggaggtttcagttttttgaggcatggcactg 20291378  T
Q  321 gaaaaatc 328  Q
    ||||||||    
T  20291379 gaaaaatc 20291386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 251 - 340
Target Start/End: Original strand, 16231369 - 16231458
Alignment:
Q  251 tgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 340  Q
    |||| ||||||||||||| |||  |||||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||||||||    
T  16231369 tgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttgggcaagacactggaaaaatcgtggcacgatgg 16231458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 13214854 - 13214989
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    ||||||||||||||||   |||||||||||||||| ||||||||||||||| |||||||| |||||||    |||||||| |||||| | ||| ||||||    
T  13214854 aatcgtggcacgatggttgggcaacgtggcacgattggaggtttcagtttt-gaggcaagtcactggatttttcgtggcatgatgggattgcaacgtggc 13214952  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||| | ||||||||||||||| |||| ||||    
T  13214953 acgatggtgtgttggcagcaaataacaaaaacgtatt 13214989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 256 - 391
Target Start/End: Complemental strand, 3580126 - 3579991
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||| ||| ||||||||| ||| || ||| ||||||||| | |||||||| || |||||||||||||| ||| |||| | ||| ||||||    
T  3580126 aatcgtggcacgattgcagggcaacgtgacacaattggatgtttcagttat-gaggcaagtcattggaaaaatcgtggtacggtgggattgcaacgtggc 3580028  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||| |||| || |||| ||||||| ||||    
T  3580027 acgatggtgcgctggcggcgaatatcataaacgtatt 3579991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 370
Target Start/End: Original strand, 23783362 - 23783406
Alignment:
Q  326 atcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  23783362 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 23783406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 280 - 391
Target Start/End: Original strand, 41646717 - 41646828
Alignment:
Q  280 cgtggcacgatg-gaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaata 378  Q
    |||||||||||  |||||||||||||| |||||||| |||||||    |||||||||| |||| | ||| ||||||||||||||||  ||||||| ||||    
T  41646717 cgtggcacgattagaggtttcagtttt-gaggcaagtcactggatttttcgtggcacggtgggattgcaacgtggcacgatggtgcactggcagcgaata 41646815  T
Q  379 acataaacatatt 391  Q
    ||| |||||||||    
T  41646816 acagaaacatatt 41646828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 223 - 305
Target Start/End: Original strand, 47451405 - 47451488
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgca-taatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttt 305  Q
    ||||||| ||||||||||||||||||| ||||  |||||||||||||||||  ||||| ||||||||| ||||||||||||||||    
T  47451405 tgtgagagttaacttcaaatcagattt-tgcagaaatcgtggcacgatggctgggcaatgtggcacgattggaggtttcagtttt 47451488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 365
Target Start/End: Complemental strand, 30790882 - 30790793
Alignment:
Q  276 gcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 365  Q
    |||| |||||||||| ||| ||||||||| | || ||||| ||||||||||| |||||||||||||| |||||  ||||||||||||||||    
T  30790882 gcaatgtggcacgattggatgtttcagttat-gaagcaagtcactggaaaaaacgtggcacgatgggatcgcaatgtggcacgatggtgcg 30790793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 330 - 386
Target Start/End: Complemental strand, 28207500 - 28207444
Alignment:
Q  330 tggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaac 386  Q
    ||||||||||||||| || ||||||||||||||||| |||| || ||||||||||||    
T  28207500 tggcacgatggggtcacaacgtggcacgatggtgcgctggcggcgaataacataaac 28207444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 391
Target Start/End: Original strand, 39462310 - 39462426
Alignment:
Q  275 ggcaacgtggcacgatg-gaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagc 373  Q
    ||||||||||||||||  |||||||||||||| |||||||| || ||||    ||||||||||||||| | |||  |||||||||||||||| | ||||     
T  39462310 ggcaacgtggcacgattagaggtttcagtttt-gaggcaagtcagtggatttttcgtggcacgatgggattgcaatgtggcacgatggtgcgcttgcagt 39462408  T
Q  374 aaataacataaacatatt 391  Q
     ||||||| |||| ||||    
T  39462409 gaataacagaaacgtatt 39462426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 340
Target Start/End: Original strand, 49687334 - 49687418
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 340  Q
    |||||||||| ||||||  ||||||||||||| | |||||||||||| |||||||||||| |||||||    ||||||||||||||    
T  49687334 aatcgtggcatgatggctgggcaacgtggcacaattggaggtttcag-ttttgaggcaagtcactggatttttcgtggcacgatgg 49687418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 305
Target Start/End: Complemental strand, 38925965 - 38925915
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttt 305  Q
    |||||||| ||||||||  ||||||||||||||| ||||||||||||||||    
T  38925965 aatcgtggtacgatggctgggcaacgtggcacgattggaggtttcagtttt 38925915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Complemental strand, 13449996 - 13449947
Alignment:
Q  316 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 365  Q
    |||||||||||||||| |||||| || ||| |||||| ||||||||||||    
T  13449996 cactggaaaaatcgtgccacgattggatcgaatcgtgccacgatggtgcg 13449947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 391
Target Start/End: Original strand, 47451508 - 47451556
Alignment:
Q  343 tcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||||||||| || |||| ||||||| |||| ||||    
T  47451508 tcgcatcgtggcacgatggtgcgctgacagcgaataacagaaacgtatt 47451556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 2e-65; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 225 - 391
Target Start/End: Original strand, 51015042 - 51015208
Alignment:
Q  225 tgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaa 324  Q
    ||||| ||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51015042 tgagagttaacttaaaatcagatttctgcagaatcgtggcatgatggcaaggcaacgtggcacgatggaggtttcagttttttaggcaaggcactggaaa 51015141  T
Q  325 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||    
T  51015142 aattgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaataacagaaacatatt 51015208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 391
Target Start/End: Complemental strand, 11006781 - 11006612
Alignment:
Q  223 tgtgagatttaacttcaaatcagattt-atgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgg 321  Q
    ||||||| ||||||| ||||||| ||| ||||| |||||||||||||| ||  |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  11006781 tgtgagagttaacttaaaatcaggttttatgcagaatcgtggcacgatcgctgggcaacgtggcacgatggaggtttcaattttttaggcaaggcactgg 11006682  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||    
T  11006681 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcaaaaaacagaaacatatt 11006612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 223 - 391
Target Start/End: Complemental strand, 9177035 - 9176867
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| ||  ||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  9177035 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggttaggcaacgtggcacgatggaggttttagttttttaggcaaggcactgga 9176936  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||  || |||| |||||||||    
T  9176935 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcagggaaaaacagaaacatatt 9176867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 231 - 391
Target Start/End: Complemental strand, 37089906 - 37089745
Alignment:
Q  231 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatg-gaggtttcagtttttgaggcaaggcactggaaaaatcg 329  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||| || |||| ||||||| |||  |||||||||||||||||    
T  37089906 ttaacttaaaatcagatttctgcagaatcgtggcacgatggcaaggcaacgtggcacgatgagatgttttagttttttaggtgaggcactggaaaaatcg 37089807  T
Q  330 tggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||||||||||||||||||| |||| || ||||||| |||| ||||    
T  37089806 tggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacgtatt 37089745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 16932360 - 16932213
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  16932360 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 16932261  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  16932260 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggc 16932213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 221 - 370
Target Start/End: Complemental strand, 22783319 - 22783170
Alignment:
Q  221 aatgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactg 320  Q
    ||||||||| ||||||| ||||||| ||| |||| |||||||| ||||| ||  |||||||||||||||||||||||| |||||||  ||||||||||||    
T  22783319 aatgtgagagttaacttaaaatcaggtttctgcagaatcgtggtacgatagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactg 22783220  T
Q  321 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| ||||    
T  22783219 gaaaaatcatggcacgatggggtctcatcgtggcacgatggtgcgctggc 22783170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 231 - 391
Target Start/End: Original strand, 24888598 - 24888758
Alignment:
Q  231 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcg 329  Q
    ||||||| ||||||||||| |||| ||| ||||||||||||| ||||||||||||||||| ||||||||||  ||| ||||||| |||||||||||||||    
T  24888598 ttaacttaaaatcagatttctgcagaattgtggcacgatggctaggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactggaaaaatcg 24888696  T
Q  330 tggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||| ||||||||||||||||||||| | ||||||| || |||| |||||||||    
T  24888697 tggcacgatgggatcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatatt 24888758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 223 - 391
Target Start/End: Complemental strand, 9174684 - 9174517
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||  |||| ||||||||||||| ||| ||||||||| ||||||||||||||| ||||| | |||||||||||||||    
T  9174684 tgtgagagttaacttaaaatcaggttc-tgcagaatcgtggcacgacggctaggcaacgtagcacgatggaggttttagtttattaggcaaggcactgga 9174586  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||| ||||||||||||||| |||||||||||||||||||| ||||||  || |||| |||||||||    
T  9174585 aaaatcatggcacgatggggtctcatcgtggcacgatggtgcgctggcagggaaaaacagaaacatatt 9174517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 221 - 365
Target Start/End: Complemental strand, 16934716 - 16934572
Alignment:
Q  221 aatgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactg 320  Q
    ||||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||| ||||||||||||||||| |||||||  ||||||||||||    
T  16934716 aatgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacatggcacgatggaggttttagttttttgggcaaggcactg 16934617  T
Q  321 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 365  Q
    |||||||||||||||||||||||| |||| |||||||||||||||    
T  16934616 gaaaaatcgtggcacgatggggtctcatcctggcacgatggtgcg 16934572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 223 - 378
Target Start/End: Complemental strand, 36920125 - 36919971
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 321  Q
    ||||||| ||||||| ||||||| ||  |||| |||||||||||||||||  |||||||||||||||| |||||||||| |||| |||||||| ||||||    
T  36920125 tgtgagagttaacttaaaatcaggttc-tgcaaaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcaatttt-gaggcaagtcactgg 36920028  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaata 378  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  36920027 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaata 36919971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 391
Target Start/End: Complemental strand, 22803270 - 22803104
Alignment:
Q  225 tgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaa 323  Q
    ||||| ||||||| |||||| |||| |  | |||||||| ||||||||  |||||||||||||||| ||||||||||||||| |||| ||||||||||||    
T  22803270 tgagagttaacttaaaatcaaatttctatagaatcgtggtacgatggctgggcaacgtggcacgattggaggtttcagtttt-gaggaaaggcactggaa 22803172  T
Q  324 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| |||| ||||    
T  22803171 aaatcgtggctcgatggggtcgcatcgtggcacgatggtgcgctggcagcgaataacaaaaacgtatt 22803104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 223 - 391
Target Start/End: Original strand, 38408993 - 38409161
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 321  Q
    ||||||| ||||||| |||| |||||| |||| |||||||||||||| ||  |||| ||||||||||| ||||||||||  ||| ||||||| |||||||    
T  38408993 tgtgagagttaacttaaaattagatttctgcagaatcgtggcacgattgctgggcatcgtggcacgattggaggtttcaagttt-gaggcaaagcactgg 38409091  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| || || |||| |||||||||    
T  38409092 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgttggcggcgaaaaacagaaacatatt 38409161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 223 - 391
Target Start/End: Complemental strand, 5638006 - 5637839
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||  |||||||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5638006 tgtgagagttaacttaaaatcaggtttctgcggaatcgtggcacgattgctgggcaacgtggcacgatggaggtttcagtttt-gaggcaaggcactgga 5637908  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||| || ||||||||| ||||||||||||| ||||||| | ||||||| || |||| |||| ||||    
T  5637907 aaaatcatgtcacgatgggatcgcatcgtggcatgatggtgagctggcagcgaaaaacagaaacgtatt 5637839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 220 - 391
Target Start/End: Complemental strand, 36922036 - 36921866
Alignment:
Q  220 taatgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcac 318  Q
    |||||||||| ||||||| ||||||| ||  |||| |||||||| ||||||||  |||||| ||||||||| ||||||||||||||| |||||||| |||    
T  36922036 taatgtgagagttaacttaaaatcaggttc-tgcaaaatcgtggtacgatggctgggcaacatggcacgattggaggtttcagtttt-gaggcaagtcac 36921939  T
Q  319 tggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  ||||||| ||||||| |||| ||||    
T  36921938 tggaaaaatcgtggcacgatggggtcgcattgtggcacgatggtgcattggcagcgaataacagaaacgtatt 36921866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 22780952 - 22780805
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||| ||||| ||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  22780952 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggtacgatagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 22780853  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||| ||||||||||||||| ||| |||||||||||||||| ||||    
T  22780852 aaaatcatggcacgatggggtctcattgtggcacgatggtgcgctggc 22780805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 256 - 391
Target Start/End: Complemental strand, 22044897 - 22044760
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttt--gaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtgg 353  Q
    |||||||||||||| | | |||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  22044897 aatcgtggcacgattgaagggcaacgtggcacgatggaggtttcattttttttgaggcaaggcactggaaaaatcgtggcacgatgggatcgcatcgtgg 22044798  T
Q  354 cacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||| | ||||||  || |||| |||||||||    
T  22044797 cacgatggtgtgctggcagggaaaaacagaaacatatt 22044760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 223 - 391
Target Start/End: Complemental strand, 3825112 - 3824944
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 321  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||| |||||||||  |||||| ||||||||| ||||||||||||||| ||||||| |||||||    
T  3825112 tgtgagagttaacttaaaatcaggtttctgcagaatcgtgacacgatggctgggcaacatggcacgattggaggtttcagtttt-gaggcaaagcactgg 3825014  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| ||||  | ||||||| |||| ||||    
T  3825013 aaaaatcatggcacaatggggtcgcatcgtggcacgatggtgcgttggcgacgaataacagaaacgtatt 3824944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 260 - 391
Target Start/End: Complemental strand, 31850101 - 31849970
Alignment:
Q  260 gtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacga 358  Q
    |||||||||| ||  |||||||||||||||| ||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31850101 gtggcacgattgctgggcaacgtggcacgattggaggtttcagttttgg-ggcaaggcactggaaaaatcttggcacgatggggtcgcatcgtggcacga 31850003  T
Q  359 tggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||| ||||||| || |||| |||||||||    
T  31850002 tggtgcgctggcagcgaaaaacagaaacatatt 31849970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 223 - 340
Target Start/End: Original strand, 7941133 - 7941251
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcag-tttttgaggcaaggcactgg 321  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7941133 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactgg 7941232  T
Q  322 aaaaatcgtggcacgatgg 340  Q
    |||||| ||||||||||||    
T  7941233 aaaaatggtggcacgatgg 7941251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 280 - 391
Target Start/End: Complemental strand, 11009075 - 11008963
Alignment:
Q  280 cgtggcacgatggaggtttcagtttttg-aggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaata 378  Q
    |||||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |    
T  11009075 cgtggcacaatggaggtttcaatttttttaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcactggcagcaaaaa 11008976  T
Q  379 acataaacatatt 391  Q
    ||| |||||||||    
T  11008975 acagaaacatatt 11008963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 223 - 340
Target Start/End: Original strand, 11434769 - 11434887
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcag-tttttgaggcaaggcactgg 321  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  11434769 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggtacgatggctgggcaacgtggcacgatggaggtttcagttttttgaggcaagacactgg 11434868  T
Q  322 aaaaatcgtggcacgatgg 340  Q
    |||||||||||||||||||    
T  11434869 aaaaatcgtggcacgatgg 11434887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 223 - 365
Target Start/End: Original strand, 18846923 - 18847067
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttat--gcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcact 319  Q
    ||||||| ||||||| ||||||||||| |  ||| |||||||||||||| |   || | ||||||||||| ||||||||||||||| ||||||||| |||    
T  18846923 tgtgagagttaacttaaaatcagatttttctgcagaatcgtggcacgattgttgggaatcgtggcacgattggaggtttcagtttt-gaggcaaggtact 18847021  T
Q  320 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 365  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  18847022 ggaaaaatcgtggtacgatggggtcgcatcgtggcacgatggtgcg 18847067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 275 - 391
Target Start/End: Original strand, 5198266 - 5198382
Alignment:
Q  275 ggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagc 373  Q
    |||||||||||||||| |||| |||||  ||| ||||||| || |||||||||||||||||||||||| || |||||||||||||||||||| |||||||    
T  5198266 ggcaacgtggcacgattggagatttcaagttt-gaggcaaagctctggaaaaatcgtggcacgatgggatcacatcgtggcacgatggtgcgctggcagc 5198364  T
Q  374 aaataacataaacatatt 391  Q
     || |||| |||||||||    
T  5198365 gaaaaacagaaacatatt 5198382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 48486146 - 48486281
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||||||   ||||||||||||||| ||||||||||||||| |||||||| |||||||    |||||||||||||||||| ||  |||||    
T  48486146 aatcgtggcacgatggctgagcaacgtggcacgattggaggtttcagtttt-gaggcaagtcactggatttttcgtggcacgatggggtcacaatgtggc 48486244  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    || |||||||| ||||||| ||||||| |||| ||||    
T  48486245 acaatggtgcgctggcagcgaataacagaaacgtatt 48486281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 9148087 - 9148192
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||| ||||| ||  ||||||||||| |||| ||||||||||  ||| ||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  9148087 aatcgtggtacgattgctgggcaacgtggcgcgattggaggtttcaagttt-gaggcaaagcactggaaaaatcgtggcacgatggggttgcatcgtggc 9148185  T
Q  355 acgatgg 361  Q
    |||||||    
T  9148186 acgatgg 9148192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 340
Target Start/End: Complemental strand, 22801346 - 22801262
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 340  Q
    ||||||||||||||||   ||||||||| |||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  22801346 aatcgtggcacgatggttgggcaacgtgacacgattggaggtttcagtttt-gaggcaaggaactggaaaaatcgtggcacgatgg 22801262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 391
Target Start/End: Original strand, 24880299 - 24880413
Alignment:
Q  277 caacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaa 375  Q
    ||||||||||||| |||||||||||||||| |||||||| |||||||    ||| ||||||||||| | ||| ||||||||||||||||| ||||||| |    
T  24880299 caacgtggcacgaatggaggtttcagtttt-gaggcaagtcactggatttttcgcggcacgatgggattgcaacgtggcacgatggtgcgctggcagcga 24880397  T
Q  376 ataacataaacatatt 391  Q
    |||||| |||| ||||    
T  24880398 ataacagaaacgtatt 24880413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 52942974 - 52942869
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    ||||||||||||||||   |||||||||||||||| ||||||||||| ||| |||||||| ||||| | |  |||||||||||||||||| || ||||||    
T  52942974 aatcgtggcacgatggttgggcaacgtggcacgattggaggtttcagcttt-gaggcaagtcactgaatatttcgtggcacgatggggtcacaacgtggc 52942876  T
Q  355 acgatgg 361  Q
    |||||||    
T  52942875 acgatgg 52942869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 22047135 - 22047055
Alignment:
Q  310 gcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||| | ||||||  || |||| |||||||||    
T  22047135 gcaaggcactggaaaaatc-tggcacgatgggatcgcatcgtggcacgatggtgtgctggcagggaaaaacagaaacatatt 22047055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 277 - 391
Target Start/End: Complemental strand, 619932 - 619818
Alignment:
Q  277 caacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaa 375  Q
    ||||||||||| || ||| ||||||||||| |||||||| || ||||    ||||||||||||||||||||| |||||||| |||||||| |||| || |    
T  619932 caacgtggcacaattggatgtttcagtttt-gaggcaagtcattggatttttcgtggcacgatggggtcgcaacgtggcacaatggtgcgctggcggcga 619834  T
Q  376 ataacataaacatatt 391  Q
    |||||| |||||||||    
T  619833 ataacagaaacatatt 619818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 328 - 391
Target Start/End: Complemental strand, 52942881 - 52942818
Alignment:
Q  328 cgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||| || |||||||||||| |||| ||||||| |||||||||||||||||    
T  52942881 cgtggcacgatggggtcacaacgtggcacgatgatgcgctggcagcgaataacataaacatatt 52942818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 391
Target Start/End: Complemental strand, 40091923 - 40091786
Alignment:
Q  254 ataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtg 352  Q
    |||||||||||||| |||   || ||||||||||||| |||| |||||||||| || | ||| || ||||||||||||| || |||||||||||| ||||    
T  40091923 ataatcgtggcacggtggttgggtaacgtggcacgattggagatttcagtttt-gaagtaagccattggaaaaatcgtgccatgatggggtcgcaacgtg 40091825  T
Q  353 gcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
     |||||||||||  || |||| |||||| ||||| ||||    
T  40091824 acacgatggtgcactgacagcgaataacgtaaacgtatt 40091786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 391
Target Start/End: Original strand, 24878836 - 24878951
Alignment:
Q  276 gcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagca 374  Q
    ||||||||||||||| ||||||||||||||| || ||||| |||||||    ||||||||||||||| | ||| |||||||||||||| || ||||| |     
T  24878836 gcaacgtggcacgattggaggtttcagtttt-gacgcaagtcactggatttttcgtggcacgatgggattgcaacgtggcacgatggtacgctggcatcg 24878934  T
Q  375 aataacataaacatatt 391  Q
    ||||||| |||| ||||    
T  24878935 aataacagaaacgtatt 24878951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 22048542 - 22048492
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttt 306  Q
    |||||||||||||| | | ||||||||||||||||||||||||||||||||    
T  22048542 aatcgtggcacgattgaagggcaacgtggcacgatggaggtttcagttttt 22048492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 391
Target Start/End: Original strand, 47274647 - 47274689
Alignment:
Q  349 cgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||    
T  47274647 cgtggcacgatggtgcgatggcagcgaataacataaacgtatt 47274689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Complemental strand, 16689380 - 16689331
Alignment:
Q  316 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 365  Q
    |||||||||||||||| |||||||   ||||| |||||||||||||||||    
T  16689380 cactggaaaaatcgtgccacgatgaaatcgcaacgtggcacgatggtgcg 16689331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 365
Target Start/End: Original strand, 8529012 - 8529060
Alignment:
Q  317 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 365  Q
    ||||||||||||||| |||||||  | ||||||||| ||||||||||||    
T  8529012 actggaaaaatcgtgccacgatgaagccgcatcgtgccacgatggtgcg 8529060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 11434873 - 11434917
Alignment:
Q  347 atcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||||| ||||||| || |||| |||||||||    
T  11434873 atcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatt 11434917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 22801276 - 22801232
Alignment:
Q  347 atcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||  |||||||||||||| |||| ||||    
T  22801276 atcgtggcacgatggtgcgccggcagcaaataacagaaacgtatt 22801232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 7e-62; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 231 - 391
Target Start/End: Complemental strand, 19502542 - 19502382
Alignment:
Q  231 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgt 330  Q
    ||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19502542 ttaacttaaaatcaggtttctgcagaatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttttaggcaaggcactggaaaaatcgt 19502443  T
Q  331 ggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||||||||||||||||||||| ||||  | ||||||| |||||||||    
T  19502442 ggcacgatggggtcgcatcgtggcacgatggtgcgctggcgacgaataacagaaacatatt 19502382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 231 - 391
Target Start/End: Original strand, 27104523 - 27104683
Alignment:
Q  231 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgt 330  Q
    ||||||| ||||||||||| |||| |||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27104523 ttaacttaaaatcagatttctgcagaatcgtggcacgattgaagggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgt 27104622  T
Q  331 ggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||| ||||||||||||||||||||||| ||||||  || ||||||||||||||    
T  27104623 ggcacgatgggatcgcatcgtggcacgatggtgcgctggcagggaaaaacataaacatatt 27104683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 222 - 387
Target Start/End: Complemental strand, 19504885 - 19504720
Alignment:
Q  222 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgg 321  Q
    |||||| | ||||||| ||||||| |||  ||| |||| |||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  19504885 atgtgaaagttaacttaaaatcaggtttcagcagaatcatggcacgatggcaaggcaacgtggcacgatggaggttttaattttttaggcaaggcactgg 19504786  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaaca 387  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  | ||||||| |||||    
T  19504785 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcgacgaataacagaaaca 19504720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 24162752 - 24162604
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttt-gaggcaaggcactgg 321  Q
    ||||||| ||||||| ||||||  ||| |||| ||||||||||| ||||   |||||||||||||||||||||||||||||||| |||||||||||||||    
T  24162752 tgtgagagttaacttaaaatcaagtttctgcagaatcgtggcacaatggttgggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactgg 24162653  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  24162652 aaaaatcgtggcacgatggggtcgcatcgtggcacgattgtgcgctggc 24162604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 36559358 - 36559211
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  36559358 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 36559259  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36559258 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 36559211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 256 - 391
Target Start/End: Complemental strand, 21521201 - 21521066
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||||| || ||||| |||||||||||||||| ||||||||| ||||| ||||||    
T  21521201 aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttt-gaagcaagccactggaaaaatcgtgccacgatgggatcgcaacgtggc 21521103  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||| ||||||| |||||||||||| ||||    
T  21521102 acgatggtgcgctggcagcgaataacataaacgtatt 21521066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 223 - 361
Target Start/End: Complemental strand, 36561677 - 36561539
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  |  |||||||||||||||| |||||||  ||||||||||||||    
T  36561677 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcacggcacgatggaggttttagttttttgggcaaggcactgga 36561578  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatgg 361  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36561577 aaaatcgtggcacgatggggtcgcatcgtggcacgatgg 36561539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 45332675 - 45332528
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||| ||||||    
T  45332675 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggaactgga 45332576  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  45332575 aaaatcgtggaacgatggggtcacatcgtggcacgatggtgcgctggc 45332528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 42064264 - 42064399
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||| ||  |||||||||| |||| |||||||||||  ||| ||||||| ||||||||||||||||||||||||||| || |||||||||    
T  42064264 aatcgtggcacgattgctgggcaacgtggtacgactggaggtttcaagttt-gaggcaaagcactggaaaaatcgtggcacgatgggatcacatcgtggc 42064362  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||| ||||||| || |||| |||||||||    
T  42064363 acgatggtgcgctggcagcgaaaaacagaaacatatt 42064399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 256 - 391
Target Start/End: Complemental strand, 6259321 - 6259186
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||||||   |||||||||||| || ||| ||||||||||| |||| ||| |||||||||||||||||||||||||| ||||| |||| |    
T  6259321 aatcgtggcacgatggctgtgcaacgtggcactattggatgtttcagtttt-gaggaaagtcactggaaaaatcgtggcacgatgggatcgcaacgtgac 6259223  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||| |||| |  ||||||| |||||||||    
T  6259222 acgatggtgcgctggcggtgaataacagaaacatatt 6259186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 43624077 - 43623968
Alignment:
Q  231 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcg 329  Q
    ||||||| ||||||| ||| |||| |||| ||||||||||||  |||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  43624077 ttaacttaaaatcaggtttctgcagaatcatggcacgatggctgggcaacatggcacgattggaggtttcagtttt-gaggcaaggcactgaaaaaatcg 43623979  T
Q  330 tggcacgatgg 340  Q
    |||||||||||    
T  43623978 tggcacgatgg 43623968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 391
Target Start/End: Complemental strand, 13910491 - 13910415
Alignment:
Q  315 gcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| || |||| |||||||||    
T  13910491 gcactggaaaaatcgtggcacgatggggtcgcattgtggcacgatggtgcgctggcagcgaaaaacagaaacatatt 13910415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 256 - 391
Target Start/End: Complemental strand, 22407915 - 22407780
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||| | | || ||| ||||||||| ||| ||||||||||| |||||||| || || |||||| ||||||||||||| || || ||||||    
T  22407915 aatcgtggcacgattgaagggtaacatggcacgattggatgtttcagtttt-gaggcaagtcagtgaaaaaattgtggcacgatgggatcacaacgtggc 22407817  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||| ||||||| ||||||| |||| ||||    
T  22407816 acgatggtgcgttggcagcgaataacagaaacgtatt 22407780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 370
Target Start/End: Complemental strand, 36561532 - 36561488
Alignment:
Q  326 atcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  36561532 atcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 36561488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 340
Target Start/End: Complemental strand, 6264611 - 6264546
Alignment:
Q  275 ggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 340  Q
    |||||||||||| ||| ||| ||||||||||| |||||||| |||||||||||||||||||||||||    
T  6264611 ggcaacgtggcatgattggatgtttcagtttt-gaggcaagtcactggaaaaatcgtggcacgatgg 6264546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 40032553 - 40032468
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggg 341  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||| ||||||| |||| |||||||    |||||||||||||||    
T  40032553 aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcag-ttttgagacaagtcactggatttttcgtggcacgatggg 40032468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 43623982 - 43623938
Alignment:
Q  347 atcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  43623982 atcgtggcacgatggtgcgctggcagcaaataacataaacgtatt 43623938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 361
Target Start/End: Complemental strand, 36561553 - 36561518
Alignment:
Q  326 atcgtggcacgatggggtcgcatcgtggcacgatgg 361  Q
    ||||||||||||||||||||||||||||||||||||    
T  36561553 atcgtggcacgatggggtcgcatcgtggcacgatgg 36561518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 1e-54; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 223 - 391
Target Start/End: Complemental strand, 22114842 - 22114674
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| || | ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22114842 tgtgagagttaacttaaaatcaggtttctgtagaatcgtggcacgatggttgggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 22114743  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| || ||||||| |||| ||||    
T  22114742 aaaattgtggcacgatggggtcgcatcgtggcacgatggtgcgatggcggcgaataacagaaacgtatt 22114674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 223 - 363
Target Start/End: Complemental strand, 6064006 - 6063866
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||  |||||||||||| |    
T  6064006 tgtgagaattaacttaaaatcaggtttatgcagaatcgtggcacgatggcaaggcaacgtggcacaatggaggttttagttttttgggcaaggcactgaa 6063907  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtg 363  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6063906 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtg 6063866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 18099707 - 18099560
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 321  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||||||| ||||||||||||||| |||||||| ||||||    
T  18099707 tgtgagagttaacttaaaatcaggtttctgcaaaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttt-gaggcaagacactgg 18099609  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18099608 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 18099560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 224 - 391
Target Start/End: Original strand, 5191374 - 5191541
Alignment:
Q  224 gtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgga 322  Q
    |||||| ||||||| ||||||||||| |||| |||||||||||||| ||  |||| ||||||||||| ||||||||||||||| ||||||||| ||||||    
T  5191374 gtgagagttaacttaaaatcagatttctgcagaatcgtggcacgattgctgggcatcgtggcacgattggaggtttcagtttt-gaggcaaggtactgga 5191472  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||||| || |||||||||||||||||||| ||||||| || |||| |||||||||    
T  5191473 aaaatcgtggcacgatgggatctcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatt 5191541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 222 - 370
Target Start/End: Original strand, 50493675 - 50493823
Alignment:
Q  222 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgg 321  Q
    |||||||| ||||||| ||||||| ||| |||| |||||||||||||| ||  |||||||||||||||||||||||| |||||||  |||||||||||||    
T  50493675 atgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgg 50493774  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||| ||| |||||||||||||||||||| ||||    
T  50493775 aaaaatcgtggcacgatggagtctcatcgtggcacgatggtgcgctggc 50493823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 38210067 - 38210214
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  38210067 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 38210166  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  38210167 aaaatcgtggcacgatggggtctcatcgtggcacgatagtgcgctggc 38210214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 239 - 352
Target Start/End: Complemental strand, 10192513 - 10192401
Alignment:
Q  239 aaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgat 338  Q
    |||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10192513 aaatcagatttatgcggaatcgtggcacgatcgcaaggcaacgtggcacgatggaggtttcag-ttttgaggcaaggcactggaaaaatcgtggcacgat 10192415  T
Q  339 ggggtcgcatcgtg 352  Q
    ||| ||||||||||    
T  10192414 gggatcgcatcgtg 10192401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 223 - 364
Target Start/End: Complemental strand, 53896754 - 53896613
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||| ||  |||||||||||||||||||||||| |||||||  ||||||| ||||||    
T  53896754 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgattgctgggcaacgtggcacgatggaggttttagttttttgggcaaggtactgga 53896655  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgc 364  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  53896654 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgc 53896613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 240 - 372
Target Start/End: Original strand, 5899476 - 5899608
Alignment:
Q  240 aatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatg 339  Q
    |||||| ||| ||||||||| ||||||||| | | ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||||||||    
T  5899476 aatcaggtttctgcataatcatggcacgattgaagggcaacgtggcacgatggatgttttagttttttaggcaaggcactggaaaaatcatggcacgatg 5899575  T
Q  340 gggtcgcatcgtggcacgatggtgcggtggcag 372  Q
    |||||||||||||||||||||||||| ||||||    
T  5899576 gggtcgcatcgtggcacgatggtgcgctggcag 5899608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 239 - 352
Target Start/End: Complemental strand, 10085593 - 10085481
Alignment:
Q  239 aaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgat 338  Q
    |||||||||||||||  |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10085593 aaatcagatttatgcggaatcgtggcatgatcgcaaggcaacgtggcacgatggaggtttcag-ttttgaggcaaggcactggaaaaatcgtggcacgat 10085495  T
Q  339 ggggtcgcatcgtg 352  Q
    ||| || |||||||    
T  10085494 gggatcacatcgtg 10085481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 282 - 391
Target Start/End: Complemental strand, 10956505 - 10956396
Alignment:
Q  282 tggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataac 380  Q
    ||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  10956505 tggcacgattggaggtttcagttttgg-ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaataac 10956407  T
Q  381 ataaacatatt 391  Q
    |||||| ||||    
T  10956406 ataaacgtatt 10956396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 223 - 354
Target Start/End: Complemental strand, 18097422 - 18097291
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 321  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||||||| ||||||||||||||| |||||||||||  ||    
T  18097422 tgtgagagttaacttaaaatcaggtttctgcaaaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttt-gaggcaaggcatagg 18097324  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    ||||||||||||||||||||||||||| |||||    
T  18097323 aaaaatcgtggcacgatggggtcgcatagtggc 18097291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 222 - 340
Target Start/End: Original strand, 38889756 - 38889875
Alignment:
Q  222 atgtgagatttaacttcaaatcagattta-tgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactg 320  Q
    |||||||| ||||||| |||| || |||  |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  38889756 atgtgagagttaacttaaaattaggttttctgcagaatcgtggtacgatggcaaggcaacgtggcacgatggaggtttcagttttttaggcaaggcattg 38889855  T
Q  321 gaaaaatcgtggcacgatgg 340  Q
    ||||||||||||||||||||    
T  38889856 gaaaaatcgtggcacgatgg 38889875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 223 - 372
Target Start/End: Original strand, 5885983 - 5886133
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaa-cgtggcacgatggaggtttcagtttttgaggcaaggcactgg 321  Q
    ||||||| ||||||| |||| || ||| | || |||||||||||||| | |  |||| |||||||||||||| |||| ||||||| |||||||| |||||    
T  5885983 tgtgagagttaacttaaaattaggtttttacagaatcgtggcacgattgaagcgcaaacgtggcacgatggatgttttagttttttaggcaaggtactgg 5886082  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcag 372  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  5886083 aaaaatcgtggcacgatggggtcgcatcgtggtacgatggtgcgctggcag 5886133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 280 - 372
Target Start/End: Original strand, 25388654 - 25388746
Alignment:
Q  280 cgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcag 372  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  25388654 cgtggcacgatggaggttttagttttttgggcaaggcactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcag 25388746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 222 - 391
Target Start/End: Complemental strand, 32264581 - 32264412
Alignment:
Q  222 atgtgagatttaacttcaaatcagatttatgcataa-tcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcact 319  Q
    |||||||| ||||||| ||||||| ||| |||| || |||||||||||||||  || ||||||||||||| |||||||||||||||||||||||| ||||    
T  32264581 atgtgagagttaacttaaaatcaggttt-tgcagaaatcgtggcacgatggctggg-aacgtggcacgattggaggtttcagtttttgaggcaagtcact 32264484  T
Q  320 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||    ||||||||||||||| | ||| ||||||||||||||||| ||||||| ||||||| |||||||||    
T  32264483 ggatttttcgtggcacgatgggcttgcaacgtggcacgatggtgcgctggcagcgaataacagaaacatatt 32264412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 223 - 340
Target Start/End: Original strand, 35777163 - 35777280
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| |||| |||||| |||| |||||||||||||  ||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  35777163 tgtgagagttaacttaaaattagatttctgcagaatcgtggcacgacagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 35777262  T
Q  323 aaaatcgtggcacgatgg 340  Q
    ||||||||||||||||||    
T  35777263 aaaatcgtggcacgatgg 35777280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 1321194 - 1321329
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgatg-gaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||| ||  ||||||||||||||||  |||||||||  ||| ||||||| |||||| |||||||||||||||||||||||||||||||||    
T  1321194 aatcgtggcacgattgctgggcaacgtggcacgattagaggtttcaagttt-gaggcaaagcactgaaaaaatcgtggcacgatggggtcgcatcgtggc 1321292  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||| | ||||||| || |||| |||||||||    
T  1321293 acgatggtgtgctggcagcgaaaaacagaaacatatt 1321329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 391
Target Start/End: Complemental strand, 5523119 - 5522984
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||| ||| ||  |||||| ||||||||| || |||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  5523119 aatcgtggcaagattgctgggcaacatggcacgattggtggtttcagtttt-gaggcaaggtactggaaaaatcgtggcacaatgggatcgcatcgtggc 5523021  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||| ||||||| || |||| |||||||||    
T  5523020 acgatggtgcgctggcagcgaaaaacagaaacatatt 5522984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 340
Target Start/End: Original strand, 11162924 - 11163008
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 340  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11162924 aatcgtggcacgattgctgggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaattgtggcacgatgg 11163008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 26720301 - 26720436
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||||||   ||||||||||| ||| ||||||||||  ||| ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  26720301 aatcgtggcacgatggctgagcaacgtggcaggattggaggtttcaagttt-gaggcaaagcactggaaaaatcgtggcacgatgggatcgcatcgtggc 26720399  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||| | ||||||| || |||| |||||||||    
T  26720400 acgatggtgtgctggcagcgaaaaacagaaacatatt 26720436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 316 - 391
Target Start/End: Complemental strand, 10958767 - 10958692
Alignment:
Q  316 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||| ||||    
T  10958767 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagccaataacagaaacgtatt 10958692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 11170178 - 11170260
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgat 338  Q
    |||||||||||| | ||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  11170178 aatcgtggcacggttgctgggcaacgtggcacgatggaggtttcggtttttgaggcaaggcactggaaaaatcgtggctcgat 11170260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 223 - 340
Target Start/End: Complemental strand, 6719651 - 6719532
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat---ggaggtttcagtttttgaggcaaggcact 319  Q
    ||||||| ||||||| ||||||| ||| ||| ||||||||||||||| | | |||| |||||||||||    ||||||||||||||| |||||| |||||    
T  6719651 tgtgagaattaacttaaaatcaggtttctgcttaatcgtggcacgattgaagggcatcgtggcacgattggagaggtttcagttttt-aggcaatgcact 6719553  T
Q  320 ggaaaaatcgtggcacgatgg 340  Q
    |||||||||||||||||||||    
T  6719552 ggaaaaatcgtggcacgatgg 6719532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 7606963 - 7606880
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttt 306  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||| |||||||||  ||||||||||||||||||||||||||||||||    
T  7606963 tgtgagagttaacttaaaatcaggtttctgcagaatcgtgacacgatggctgggcaacgtggcacgatggaggtttcagttttt 7606880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 24177032 - 24177167
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||| | ||| |||||||||||||||| ||  ||||||||| | || ||||| |||||||||||  ||||||||||||| |||||  |||||    
T  24177032 aatcgtggcacgtttgcagggcaacgtggcacgattggttgtttcagttct-gaagcaagtcactggaaaaaatgtggcacgatgggatcgcaatgtggc 24177130  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||| |||  || || ||||||||| ||||    
T  24177131 acgatggtgcgttggaggcgaaaaacataaacgtatt 24177167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 340
Target Start/End: Complemental strand, 6066254 - 6066195
Alignment:
Q  281 gtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 340  Q
    |||||||||||||||||| |||||||  |||||||||||||||| |||||||||||||||    
T  6066254 gtggcacgatggaggttttagttttttgggcaaggcactggaaacatcgtggcacgatgg 6066195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 3859350 - 3859416
Alignment:
Q  325 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||| |||||||||||||||||||| |||| || ||||| |||||| ||||    
T  3859350 aatcgtggcacgatggggtcacatcgtggcacgatggtgcgctggcggcgaataatataaacgtatt 3859416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 391
Target Start/End: Original strand, 45882752 - 45882827
Alignment:
Q  316 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||| ||||||||| | ||| ||||||||||||||||| || || | ||||||| |||| ||||    
T  45882752 cactggaaaaatcgtgccacgatgggattgcaacgtggcacgatggtgcgctgacaacgaataacagaaacctatt 45882827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 3859315 - 3859365
Alignment:
Q  221 aatgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatgg 271  Q
    ||||||||| ||||||| ||||||| ||| |||||||||||||||||||||    
T  3859315 aatgtgagagttaacttaaaatcaggtttctgcataatcgtggcacgatgg 3859365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 35777266 - 35777309
Alignment:
Q  347 atcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||    
T  35777266 atcgtggcacgatggtgcgctggcagcaaa-aacataaacatatt 35777309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Complemental strand, 4308725 - 4308676
Alignment:
Q  316 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 365  Q
    |||||||||||||||| |||||| || ||| |||||| ||||||||||||    
T  4308725 cactggaaaaatcgtgccacgattggatcgaatcgtgccacgatggtgcg 4308676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 10084807 - 10084762
Alignment:
Q  346 catcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||| ||||||| || |||| |||||||||    
T  10084807 catcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatt 10084762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 10191727 - 10191682
Alignment:
Q  346 catcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||| ||||||| || |||| |||||||||    
T  10191727 catcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatt 10191682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 6719546 - 6719502
Alignment:
Q  347 atcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||||| |||| || ||||||| |||||||||    
T  6719546 atcgtggcacgatggtgcgctggcggcgaataacagaaacatatt 6719502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 38889861 - 38889905
Alignment:
Q  347 atcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||||| |||| || ||||||| |||||||||    
T  38889861 atcgtggcacgatggtgcgctggcggcgaataacagaaacatatt 38889905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 13054 - 12907
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  13054 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgtcaaggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 12955  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  12954 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggc 12907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 1e-51; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 223 - 391
Target Start/End: Complemental strand, 14507716 - 14507546
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagt--ttttgaggcaaggcactg 320  Q
    ||||||| ||||||| ||||||||||| |||| |||||||||||||||||  ||||||||||||||||||||||||||||  ||||||  ||||||||||    
T  14507716 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggtttcagtttttttgatacaaggcactg 14507617  T
Q  321 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || |||| || |||| |||||||||    
T  14507616 gaaaaatggtggcacgatggggtcgcatcgtggcacgatggtgcgctgccagcgaaaaacagaaacatatt 14507546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 256 - 391
Target Start/End: Complemental strand, 19227915 - 19227780
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 355  Q
    ||||||||||||||||   |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19227915 aatcgtggcacgatggttgggcaacgtggcatgatggaggtttcaatttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 19227816  T
Q  356 cgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||| |||| || ||||||| |||||||||    
T  19227815 cgatggtgcgctggcggcgaataacagaaacatatt 19227780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 26068882 - 26068735
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| ||||||||||||||||| ||||||||||| |||||||  ||||||||||||||    
T  26068882 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggcaaggcaacgtggcatgatggaggttttagttttttgggcaaggcactgga 26068783  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  26068782 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggc 26068735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 8995288 - 8995423
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  8995288 aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttttg-ggcaaggcactggaaaaatcgtggcacgatggggtcacatcgtggc 8995386  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||| || |||||||||||| |||| ||||    
T  8995387 acgatggtgcgctgacagcaaataacagaaacgtatt 8995423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 9019735 - 9019870
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  9019735 aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttttg-ggcaaggcactggaaaaatcgtggcacgatggggtcacatcgtggc 9019833  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||| || |||||||||||| |||| ||||    
T  9019834 acgatggtgcgctgacagcaaataacagaaacgtatt 9019870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 26066611 - 26066464
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| || | ||||||||||||| ||||||||||||||||||||||||||||| |||| ||  ||||||||||||||    
T  26066611 tgtgagagttaacttaaaatcaggtttctgtagaatcgtggcacgacggcaaggcaacgtggcacgatggaggttttagttatttgggcaaggcactgga 26066512  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  26066511 aaaatcgtggcacgatggggtctcatcgtggcacaatggtgcgctggc 26066464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 33308685 - 33308832
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  ||||||||||||||||||| |||||||  ||||||||||||||    
T  33308685 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcttcgtggcacgatggaggttttagttttttgggcaaggcactgga 33308784  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33308785 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 33308832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 33310954 - 33311101
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  ||||||||||||||||||| |||||||  ||||||||||||||    
T  33310954 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcttcgtggcacgatggaggttttagttttttgggcaaggcactgga 33311053  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33311054 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 33311101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 29755279 - 29755132
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  29755279 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 29755180  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29755179 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 29755132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 231 - 391
Target Start/End: Complemental strand, 11983558 - 11983400
Alignment:
Q  231 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgt 330  Q
    ||||||| ||||||| ||| |||| |||||||| |||||||   |||||| ||| |||||||||||||||||| | |||| ||| |||||||||||||||    
T  11983558 ttaacttaaaatcaggtttctgcagaatcgtggtacgatggttgggcaacatggtacgatggaggtttcagttgt-gaggtaag-cactggaaaaatcgt 11983461  T
Q  331 ggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||||||||||||||||||||| ||||||| || |||| |||||||||    
T  11983460 ggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatt 11983400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 280 - 391
Target Start/End: Complemental strand, 4816749 - 4816639
Alignment:
Q  280 cgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaata 378  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| |    
T  4816749 cgtggcacgattggaggtttcagtttt-gaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgtgctggtagcaaa-a 4816652  T
Q  379 acataaacatatt 391  Q
    ||| |||||||||    
T  4816651 acagaaacatatt 4816639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 372
Target Start/End: Complemental strand, 15530628 - 15530512
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||||||  || |||||||||| || ||||||||||  ||| ||||||| ||||| ||||| |||||| ||||||||| |||||||||||    
T  15530628 aatcgtggcacgatggctgggtaacgtggcacaattggaggtttcaagttt-gaggcaaagcactcgaaaattcgtggtacgatggggccgcatcgtggc 15530530  T
Q  355 acgatggtgcggtggcag 372  Q
    ||||||||| | ||||||    
T  15530529 acgatggtgtgctggcag 15530512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 391
Target Start/End: Complemental strand, 30729284 - 30729199
Alignment:
Q  306 tgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||| |||||||||  ||||| |||||||||||| || ||||||||||| ||||| ||||||| ||||||| |||| ||||    
T  30729284 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaacgtggcacgatagtgcgctggcagcgaataacagaaacgtatt 30729199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 365
Target Start/End: Original strand, 26084818 - 26084867
Alignment:
Q  316 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 365  Q
    |||||||||||||||| |||||| |  |||||||||||||||||||||||    
T  26084818 cactggaaaaatcgtgccacgattgaatcgcatcgtggcacgatggtgcg 26084867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 340
Target Start/End: Original strand, 32279845 - 32279910
Alignment:
Q  275 ggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 340  Q
    |||||||||||||||| ||| ||||||||| | |||||||| | |||||||| ||||||||||||||    
T  32279845 ggcaacgtggcacgattggatgtttcagttct-gaggcaagtcgctggaaaagtcgtggcacgatgg 32279910  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 391
Target Start/End: Complemental strand, 15541596 - 15541511
Alignment:
Q  306 tgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||| | |||||||||  || || ||||||| | ||||| |||||||||||||| || ||||||| |||| || |||||||||    
T  15541596 tgaggcacgtcactggaaatttcatgccacgatgagatcgcaacgtggcacgatggtacgctggcagcgaatagcagaaacatatt 15541511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 1e-51; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 34477632 - 34477485
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||  ||| |||| |||||||||||||||||  |||||||||||||||||||||||| ||||||| |||||||||||||||    
T  34477632 tgtgagagttaacttaaaatcaagtttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggttttagttttttaggcaaggcactgga 34477533  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34477532 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 34477485  T

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Target: chr5; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 38881878 - 38882013
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 355  Q
    |||||||||||||| ||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38881878 aatcgtggcacgattgctgggcaacgtggcacgatggaggttttagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 38881977  T
Q  356 cgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||| |||| || ||||||| |||| ||||    
T  38881978 cgatggtgcgctggcggcgaataacagaaacgtatt 38882013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 223 - 340
Target Start/End: Original strand, 2174680 - 2174797
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2174680 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttttaggcaaggcactgga 2174779  T
Q  323 aaaatcgtggcacgatgg 340  Q
    ||||||||||||||||||    
T  2174780 aaaatcgtggcacgatgg 2174797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 223 - 391
Target Start/End: Original strand, 31544798 - 31544966
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||| ||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  31544798 tgtgagagttaacttaaaatcaggtttctgcaaaatcgtggcacgatagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 31544897  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||||| ||||| | |||||||||||| |||| |  || |||| |||||||||    
T  31544898 aaaatcgtggcacgatggggtctcatcgagacacgatggtgcgctggcggataaaaacagaaacatatt 31544966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 10749505 - 10749652
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  10749505 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 10749604  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10749605 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 10749652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 231 - 372
Target Start/End: Original strand, 4236378 - 4236519
Alignment:
Q  231 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcg 329  Q
    ||||||| ||||||||||| |||| ||| |||||||||||||  |||||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  4236378 ttaacttaaaatcagatttctgcagaattgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttta-aggcaaggcactggaaaaatcg 4236476  T
Q  330 tggcacgatggggtcgcatcgtggcacgatggtgcggtggcag 372  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||    
T  4236477 tggcacaatgggatcgcatcgtggcacgatggtgcgctggcag 4236519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 223 - 391
Target Start/End: Original strand, 31542442 - 31542610
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||| |||||| ||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  31542442 tgtgagagttaacttaaaatcaggtttctgcaaaatcgtgacacgatagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 31542541  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||||| ||||| | |||||||||||| |||| |  || |||| |||||||||    
T  31542542 aaaatcgtggcacgatggggtctcatcgagacacgatggtgcgctggcggataaaaacagaaacatatt 31542610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 10756960 - 10757107
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| |||||| |||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  10756960 tgtgagagttaacttaaaatcaggtttctgcacaatcgtagcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 10757059  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10757060 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 10757107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 15355065 - 15354918
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  15355065 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 15354966  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15354965 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 15354918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 15357341 - 15357194
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  15357341 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 15357242  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15357241 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 15357194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 223 - 340
Target Start/End: Complemental strand, 34479972 - 34479855
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||||||||||||||| ||||||| |||||||||||||||    
T  34479972 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggttttagttttttaggcaaggcactgga 34479873  T
Q  323 aaaatcgtggcacgatgg 340  Q
    ||||||||||||||||||    
T  34479872 aaaatcgtggcacgatgg 34479855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 223 - 340
Target Start/End: Original strand, 39797849 - 39797966
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||| |||    
T  39797849 tgtgagagttaacttaaaatcaggtttctgcataatcgtggcacgatggctgggcaacgtggcatgatggaggtttcagtttttgaggcaaggcaccgga 39797948  T
Q  323 aaaatcgtggcacgatgg 340  Q
    |||||| |||||||||||    
T  39797949 aaaatcatggcacgatgg 39797966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 16775930 - 16776065
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||  ||| ||||||| |||||| |||||||||||||||||||||||||||||||||    
T  16775930 aatcgtggcacgatggcaaggcaacgtgacacgattggaggtttcaagttt-gaggcaaagcactgaaaaaatcgtggcacgatggggtcgcatcgtggc 16776028  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||| ||||| | || |||| |||||||||    
T  16776029 acgatggtgcgctggcatcgaaaaacagaaacatatt 16776065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 222 - 340
Target Start/End: Complemental strand, 25921993 - 25921874
Alignment:
Q  222 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagt-ttttgaggcaaggcactg 320  Q
    |||||||| ||||||| ||||||| ||| |||| ||||||||||||||||   | |||||||||||||||||||||||||| ||||||||||||||||||    
T  25921993 atgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggttggacaacgtggcacgatggaggtttcagttttttgaggcaaggcactg 25921894  T
Q  321 gaaaaatcgtggcacgatgg 340  Q
    ||||||||||||||||||||    
T  25921893 gaaaaatcgtggcacgatgg 25921874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 222 - 370
Target Start/End: Original strand, 23664833 - 23664981
Alignment:
Q  222 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgg 321  Q
    |||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||| ||| | |||||  || ||||||||||    
T  23664833 atgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggagtttttatttttttgggaaaggcactgg 23664932  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  23664933 aaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggc 23664981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 222 - 370
Target Start/End: Complemental strand, 23793754 - 23793606
Alignment:
Q  222 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgg 321  Q
    |||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||| ||| | |||||  || ||||||||||    
T  23793754 atgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggagtttttatttttttgggaaaggcactgg 23793655  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  23793654 aaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggc 23793606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 23667109 - 23667256
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||| ||| | |||||  || |||||||||||    
T  23667109 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggagtttttatttttttgggaaaggcactgga 23667208  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  23667209 aaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggc 23667256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 280 - 370
Target Start/End: Complemental strand, 31179897 - 31179807
Alignment:
Q  280 cgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||| |||||||  |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  31179897 cgtggcacgatggaggttttagttttttgggcaagacactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggc 31179807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 314 - 391
Target Start/End: Complemental strand, 21684909 - 21684832
Alignment:
Q  314 ggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||| |||||||||    
T  21684909 ggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatt 21684832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 256 - 340
Target Start/End: Original strand, 659746 - 659829
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 340  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  659746 aatcgtggcacgatggctaggcaacgtggcacgattggaggtttcagttt--gaggcaagtcactggaaaaatcgtggcacgatgg 659829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 223 - 340
Target Start/End: Complemental strand, 38960604 - 38960487
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||   | |||||||||||||||| |||||||  ||||||||||||||    
T  38960604 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggctttgcggcacgatggaggttttagttttttgggcaaggcactgga 38960505  T
Q  323 aaaatcgtggcacgatgg 340  Q
    ||||||||||||||||||    
T  38960504 aaaatcgtggcacgatgg 38960487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 278 - 358
Target Start/End: Complemental strand, 659929 - 659850
Alignment:
Q  278 aacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacga 358  Q
    ||||||||||||| ||||||||||||||  |||||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  659929 aacgtggcacgattggaggtttcagttt--gaggcaagtcactggaaaaatcgtggcacgatgaggtcgcattgtggcacga 659850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 21947803 - 21947935
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||||| |||||||| ||| |||||||     |||||||||||||| | ||| ||||||    
T  21947803 aatcgtggcacgatggctaggcaacgtgacacgattggaggtttcag-ttttgaggtaagtcactggactttacgtggcacgatgggattgcaacgtggc 21947901  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||   |||||||| ||||||| |||||||||    
T  21947902 acgatggt---gtggcagcgaataacagaaacatatt 21947935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 18186589 - 18186489
Alignment:
Q  221 aatgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcact 319  Q
    ||||||||| ||||||| ||||||  ||| |||| |||||||| ||||||||  ||||||||||||||| |||||||||||| |||||||||||| ||||    
T  18186589 aatgtgagagttaacttaaaatcaagtttctgcagaatcgtggtacgatggctgggcaacgtggcacgattggaggtttcag-ttttgaggcaagtcact 18186491  T
Q  320 gg 321  Q
    ||    
T  18186490 gg 18186489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 223 - 340
Target Start/End: Complemental strand, 31466496 - 31466379
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcat-aatcgtggcacgatggcaaggcaacgtggcacgatg-gaggtttcagtttttgaggcaaggcactg 320  Q
    ||||||| ||||||| ||||||| ||| ||||  |||||||||||||| | | ||||||||||||||||| || ||||||||| | |||||||| |||||    
T  31466496 tgtgagagttaacttaaaatcaggttt-tgcaggaatcgtggcacgattgaagggcaacgtggcacgatgagatgtttcagttat-gaggcaagtcactg 31466399  T
Q  321 gaaaaatcgtggcacgatgg 340  Q
    |||||||| |||||||||||    
T  31466398 gaaaaatcttggcacgatgg 31466379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 340
Target Start/End: Complemental strand, 2818813 - 2818729
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 340  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||| |||||||||||| |||||||    ||||||||||||||    
T  2818813 aatcgtggcacgatggctaggcaacatggcacgattggaggtttcag-ttttgaggcaagtcactggatttttcgtggcacgatgg 2818729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 256 - 359
Target Start/End: Complemental strand, 20504419 - 20504316
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||| ||  ||||||||||||||| ||||||||| || |||||||||||| || ||||    ||||||||||||||| | ||| ||||||    
T  20504419 aatcgtggcacgatagctgggcaacgtggcacgattggaggttttag-ttttgaggcaagtcaatggatttttcgtggcacgatgggattgcaacgtggc 20504321  T
Q  355 acgat 359  Q
    |||||    
T  20504320 acgat 20504316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 256 - 391
Target Start/End: Complemental strand, 20507968 - 20507833
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||| |   |||||||| ||||||| |||||||| |||||| |||||||| || ||||    ||||||||||||||| | ||| | ||||    
T  20507968 aatcgtggcacgatagttgggcaacgtagcacgattggaggttttagtttt-gaggcaagtcattggatttttcgtggcacgatgggattgcaacatggc 20507870  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||| |||||| | ||||| ||||||| |||||||||    
T  20507869 acgaaggtgcgctagcagcgaataacagaaacatatt 20507833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 223 - 287
Target Start/End: Complemental strand, 21684969 - 21684905
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcac 287  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||||    
T  21684969 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcac 21684905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 321
Target Start/End: Complemental strand, 36402845 - 36402747
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactgg 321  Q
    ||||||| ||||||| |||| || ||| |||| ||||  |||||||||||  |||||| | |||||| |||||||||||| |||||||||||| ||||||    
T  36402845 tgtgagagttaacttaaaattaggtttctgcagaatctaggcacgatggctgggcaacatagcacgattggaggtttcag-ttttgaggcaagtcactgg 36402747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Original strand, 39854317 - 39854366
Alignment:
Q  316 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 365  Q
    |||||||||||||||| |||| | |  |||||||||||||||||||||||    
T  39854317 cactggaaaaatcgtgtcacggttgaatcgcatcgtggcacgatggtgcg 39854366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Original strand, 42238047 - 42238096
Alignment:
Q  316 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 365  Q
    |||||||||||||||| |||||||   ||||| |||||||||||||||||    
T  42238047 cactggaaaaatcgtgccacgatgaaatcgcaacgtggcacgatggtgcg 42238096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 364
Target Start/End: Original strand, 1240171 - 1240219
Alignment:
Q  316 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgc 364  Q
    |||||||||||||||| |||||| || ||| |||||| |||||||||||    
T  1240171 cactggaaaaatcgtgccacgattggatcgaatcgtgccacgatggtgc 1240219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 372
Target Start/End: Original strand, 4409890 - 4409946
Alignment:
Q  316 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcag 372  Q
    |||||||||||||||| ||| || || ||| |||||| |||||||||||| ||||||    
T  4409890 cactggaaaaatcgtgccacaattggatcgaatcgtgccacgatggtgcgatggcag 4409946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 12556408 - 12556325
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatg 339  Q
    ||||||||||  |||||  ||||||||||||| || ||||||||||||||| |||||||| |||||||    |||||||||||||    
T  12556408 aatcgtggcataatggctgggcaacgtggcacaattggaggtttcagtttt-gaggcaagtcactggatttttcgtggcacgatg 12556325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 31179933 - 31179885
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatgg 271  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||||||    
T  31179933 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 31179885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 351 - 391
Target Start/End: Original strand, 39797956 - 39797996
Alignment:
Q  351 tggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||| ||||||| ||||||| |||||||||    
T  39797956 tggcacgatggtgcgctggcagcgaataacagaaacatatt 39797996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 18812668 - 18812815
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| || | ||||||||||||| |||  |||||||||||||||||||||||| ||||||| |||||||||||||||    
T  18812668 tgtgagagttaacttaaaatcaggtttctgaagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttaggcaaggcactgga 18812767  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18812768 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 18812815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 43079347 - 43079494
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  43079347 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggcaaggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 43079446  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  43079447 aaaatcgtggtacgatggggtctcatcgtggcacgatggtgcgctggc 43079494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 223 - 362
Target Start/End: Original strand, 43081722 - 43081861
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||||||||| |||||||||||||||||| |||||||  ||||||||||||||    
T  43081722 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggcaaggcaaagtggcacgatggaggttttagttttttgggcaaggcactgga 43081821  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggt 362  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  43081822 aaaatcgtggcacgatggggtctcatcgtggcacgatggt 43081861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 27826815 - 27826950
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 355  Q
    |||||||||||||| ||  |||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||    
T  27826815 aatcgtggcacgattgctgggcaacgtggcacgatggaggtttcattttttgaagcaaagcactggaaaaatcgtggcacgatgggatcgcatcgtggca 27826914  T
Q  356 cgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||| ||||||| || |||| |||||||||    
T  27826915 cgatggtgcgctggcagcgaaaaacaaaaacatatt 27826950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 27829126 - 27829261
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 355  Q
    |||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  27829126 aatcgtggcacgattgctgggcaacgtggcacgatggaggtttcattttttgaggcaaaacactggaaaaatcgtggcacgatgggatcgcatcgtggca 27829225  T
Q  356 cgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||| ||||||| || |||| |||||||||    
T  27829226 cgatggtgcgctggcagcgaaaaacaaaaacatatt 27829261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 256 - 391
Target Start/End: Complemental strand, 12517532 - 12517397
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | ||||||||||||||||||||||||| ||||||||||||    
T  12517532 aatcgtggcacgatggcaaggcaacgtggcacgattggaggtttcagtttt-gaggcaatgtactggaaaaatcgtggcacgatgggatcgcatcgtggc 12517434  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||| | ||||||| || |||| |||||||||    
T  12517433 acgatggtgtgctggcagcgaaaaacagaaacatatt 12517397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 18810483 - 18810630
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||||||||||||||||||||| | ||||| |||||||||||||||    
T  18810483 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttatttttttaggcaaggcactgga 18810582  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||| | |||||||||||||| |||||||||||||||||||| ||||    
T  18810583 aaaattgcggcacgatggggtcacatcgtggcacgatggtgcgctggc 18810630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 223 - 391
Target Start/End: Original strand, 44720617 - 44720785
Alignment:
Q  223 tgtgagatttaacttcaaatcagattta-tgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactg 320  Q
    ||||||| ||||||| ||||||| |||  |||| |||||||||| ||| ||  ||||  |||||||| | ||||||||||||||| ||||||||| ||||    
T  44720617 tgtgagagttaacttaaaatcaggttttctgcagaatcgtggcatgattgctgggcattgtggcacgtttggaggtttcagtttt-gaggcaaggtactg 44720715  T
Q  321 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||    
T  44720716 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcaaa-aacagaaacatatt 44720785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 231 - 391
Target Start/End: Original strand, 14807556 - 14807716
Alignment:
Q  231 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcg 329  Q
    ||||||| ||||||| ||| |||| |||||||||| |||||   ||||||||| |||||| ||||||||||  ||| ||||||| |||||||||||||||    
T  14807556 ttaacttaaaatcaggtttctgcagaatcgtggcatgatggttgggcaacgtgacacgattggaggtttcaagttt-gaggcaaagcactggaaaaatcg 14807654  T
Q  330 tggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| || ||||||||| ||||    
T  14807655 tggcacgatggggtcgcatcgtggcacggtggtgcgctggcagcgaaaaacataaacgtatt 14807716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 391
Target Start/End: Original strand, 15067785 - 15067945
Alignment:
Q  231 ttaacttcaaatcagatttatgcat-aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatc 328  Q
    ||||||| ||||||||||| ||||  |||||||||| ||||||  |||||| ||||||||| ||||||||||||||| || ||||| |||||||||||||    
T  15067785 ttaacttaaaatcagattt-tgcaggaatcgtggcaagatggctgggcaacatggcacgattggaggtttcagtttt-gaagcaagccactggaaaaatc 15067882  T
Q  329 gtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
     || ||||||||| ||||| ||||||||||||||||| ||||||| ||||||| |||| ||||    
T  15067883 atgccacgatgggatcgcaacgtggcacgatggtgcgctggcagcgaataacaaaaacgtatt 15067945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 28252093 - 28251988
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||||  ||| ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  28252093 aatcgtggcacgatggctaggcaacgtggtacgattggaggtttcaagttt-gaggcaaagcactggaaaaatcgtggcacgatgggatcgcatcgtggc 28251995  T
Q  355 acgatgg 361  Q
    |||||||    
T  28251994 acgatgg 28251988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 223 - 391
Target Start/End: Original strand, 15072506 - 15072674
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcat-aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactg 320  Q
    ||||||| ||||||| ||||||||||  ||||  ||||||| |||||||||  ||||||||| |||||| ||||||||||||||| || ||||| ||||     
T  15072506 tgtgagagttaacttaaaatcagattc-tgcaggaatcgtgacacgatggctgggcaacgtgacacgattggaggtttcagtttt-gaagcaagccacta 15072603  T
Q  321 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||| ||||||||| ||||| ||||||| ||||||||| ||||||| ||||||| |||| ||||    
T  15072604 gaaaaatcgtgtcacgatgggatcgcaacgtggcatgatggtgcgctggcagcgaataacagaaacgtatt 15072674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 340
Target Start/End: Complemental strand, 3886412 - 3886322
Alignment:
Q  251 tgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagt-ttttgaggcaaggcactggaaaaatcgtggcacgatgg 340  Q
    |||| ||||||| || ||||||  | |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  3886412 tgcagaatcgtgacatgatggctggacaacgtggcacgatggaggtttcagttttttgaggcaagacactggaaaaatcgtggtacgatgg 3886322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 340
Target Start/End: Original strand, 4423868 - 4423952
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 340  Q
    ||||||||||| || ||  ||||||||||||| || |||||||||||||||  |||||||||||||||||||||||||||||||||    
T  4423868 aatcgtggcacaattgctgggcaacgtggcacaattggaggtttcagtttta-aggcaaggcactggaaaaatcgtggcacgatgg 4423952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 391
Target Start/End: Complemental strand, 28252002 - 28251937
Alignment:
Q  326 atcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||||| || |||| |||| ||||    
T  28252002 atcgtggcacgatgggatcgcatcgtggtacgatggtgcgttggcagcgaaaaacagaaacgtatt 28251937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 4e-48; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 223 - 391
Target Start/End: Original strand, 3878322 - 3878490
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 321  Q
    ||||||| ||||||| ||||||||||| |||| |||||||||||||||||  |||||||||||||||| ||||||||||  ||| ||||||| |||||||    
T  3878322 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactgg 3878420  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||| |||| ||||    
T  3878421 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtacgctggcagcgaataacagaaacgtatt 3878490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 1047503 - 1047356
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  1047503 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 1047404  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  1047403 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggc 1047356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 2935070 - 2935217
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  2935070 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 2935169  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2935170 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 2935217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 9027687 - 9027540
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  9027687 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 9027588  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9027587 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 9027540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 22136878 - 22137025
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  22136878 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 22136977  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22136978 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 22137025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 40551905 - 40552052
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  40551905 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 40552004  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40552005 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 40552052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 222 - 391
Target Start/End: Complemental strand, 27306768 - 27306600
Alignment:
Q  222 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactg 320  Q
    |||||||| ||||||| |||| || ||| |||| |||||||||||||||||  | |||||||||||||| ||||||||||||||| |||||||| || ||    
T  27306768 atgtgagagttaacttaaaataaggttt-tgcaaaatcgtggcacgatggctggacaacgtggcacgattggaggtttcagtttt-gaggcaagtcattg 27306671  T
Q  321 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||||||||| |||||||||||||||||| | ||||| ||||||| |||| ||||    
T  27306670 gaaaaatcgtggcacgatggggtcgcttcgtggcacgatggtgcgctagcagcgaataacagaaacgtatt 27306600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 22107867 - 22108014
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || ||||||||| |||||| |||||||  ||||||||||||||    
T  22107867 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatgcaggttttagttttttgggcaaggcactgga 22107966  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22107967 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 22108014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 40549627 - 40549774
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || ||||||||| |||||| |||||||  ||||||||||||||    
T  40549627 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatgcaggttttagttttttgggcaaggcactgga 40549726  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40549727 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 40549774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 223 - 340
Target Start/End: Complemental strand, 40837261 - 40837144
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||||||   | |||||||||||||||||||||||||||||| |||||||||||||||    
T  40837261 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggtcggacaacgtggcacgatggaggtttcagttttttaggcaaggcactgga 40837162  T
Q  323 aaaatcgtggcacgatgg 340  Q
    ||||||||||||||||||    
T  40837161 aaaatcgtggcacgatgg 40837144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 35412 - 35547
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||| || ||||||||||||||||| ||||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35412 aatcgtggcacgattgctaggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggc 35510  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
     |||| ||||| |||||||||||| || |||| ||||    
T  35511 ccgatcgtgcgctggcagcaaatagcagaaacgtatt 35547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 44347 - 44482
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    ||||||||||||||  |  ||||| |||||||||| ||||||||||  ||| || |||| |||||||||||||| |||||||||||||||||||||||||    
T  44347 aatcgtggcacgatttctgggcaatgtggcacgattggaggtttcaagttt-gacgcaaagcactggaaaaatcatggcacgatggggtcgcatcgtggc 44445  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||| |||||||||||||||||||||||||    
T  44446 acgatggtgcgctggcagcaaataacataaacatatt 44482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 260 - 391
Target Start/End: Original strand, 25542317 - 25542448
Alignment:
Q  260 gtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacga 358  Q
    |||||||||| ||  |||||||||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  25542317 gtggcacgattgctgggcaacgtggcacgattggaggtttcagtttta-aggcaaggcacttgaaaaatcgtggcacgatgggatcgcatcgtggcacga 25542415  T
Q  359 tggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||| ||||||| || |||| |||||||||    
T  25542416 tggtgcgctggcagcgaaaaacagaaacatatt 25542448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 223 - 340
Target Start/End: Original strand, 26804345 - 26804462
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 321  Q
    ||||||| ||||||| ||||||| ||| | || |||||||||||||||||  |||||||||| ||||| ||||||||||||||| ||||||||||| |||    
T  26804345 tgtgagagttaacttaaaatcaggtttctacagaatcgtggcacgatggctgggcaacgtggtacgattggaggtttcagtttt-gaggcaaggcagtgg 26804443  T
Q  322 aaaaatcgtggcacgatgg 340  Q
    |||||||||||||||||||    
T  26804444 aaaaatcgtggcacgatgg 26804462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 256 - 391
Target Start/End: Original strand, 18567396 - 18567531
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||| ||  ||||| |||||||||| ||||||||||||||| |||||||| |||||||    |||||||||||||||||| || | ||||    
T  18567396 aatcgtggcacgatagctgggcaaagtggcacgattggaggtttcagtttt-gaggcaagtcactggatttttcgtggcacgatggggtcacaacttggc 18567494  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||| ||||| | ||||||| |||| ||||    
T  18567495 acgatggtgcgctggcaacgaataacagaaacgtatt 18567531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 256 - 391
Target Start/End: Complemental strand, 31435553 - 31435418
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 354  Q
    |||||||||||||| ||  ||||| |||||||||| ||||||||||||||| |||||||| |||||||    |||||||||||||||||| || | ||||    
T  31435553 aatcgtggcacgatagctgggcaaagtggcacgattggaggtttcagtttt-gaggcaagtcactggatttttcgtggcacgatggggtcacaacttggc 31435455  T
Q  355 acgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||| ||||| | ||||||| |||| ||||    
T  31435454 acgatggtgcgctggcaacgaataacagaaacgtatt 31435418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 337
Target Start/End: Complemental strand, 1049780 - 1049699
Alignment:
Q  256 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacga 337  Q
    |||||||||||||| ||  |||||||||||||||| ||||||||||||||| || |||||| |||||||||||||||||||||    
T  1049780 aatcgtggcacgattgctgggcaacgtggcacgattggaggtttcagtttt-gaagcaaggtactggaaaaatcgtggcacga 1049699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 26804448 - 26804492
Alignment:
Q  347 atcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||    
T  26804448 atcgtggcacgatggtgcgctggcagcaaataacagaaacgtatt 26804492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Original strand, 40946167 - 40946216
Alignment:
Q  316 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 365  Q
    |||||||||||||||| |||||| || ||| |||||| ||||||||||||    
T  40946167 cactggaaaaatcgtgtcacgattggatcgaatcgtgccacgatggtgcg 40946216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 42006404 - 42006484
Alignment:
Q  310 gcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||| ||||| |||||||||||||||||||  ||| | |||||||||||||| | || | || ||||||||||||| ||||    
T  42006404 gcaagtcactgaaaaaatcgtggcacgatggaatcgtaacgtggcacgatggtac-gttgaaggaaataacataaacgtatt 42006484  T

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Target: scaffold0250 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 2670 - 2797
Alignment:
Q  264 cacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggt 362  Q
    |||||| || ||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  2670 cacgattgctaggcaacgtggcacgattggaggtttcagtttt-gaggcaaggtactggaaaaatcgtggcacgatgggatcgcatcgtggcacgatggt 2768  T
Q  363 gcggtggcagcaaataacataaacatatt 391  Q
    ||| ||||||| |||||||||||| ||||    
T  2769 gcgctggcagcgaataacataaacgtatt 2797  T

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Target: scaffold0140 (Bit Score: 84; Significance: 8e-40; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 21915 - 22062
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  21915 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 22014  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22015 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 22062  T

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Target: scaffold0140; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 24190 - 24337
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  24190 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 24289  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24290 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 24337  T

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Target: scaffold0025 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 231 - 391
Target Start/End: Complemental strand, 69825 - 69665
Alignment:
Q  231 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcg 329  Q
    ||||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||||||  ||| ||||||| |||||||||||||||    
T  69825 ttaacttaaaatcagatttctgcagaatcgtggcacgatggctaggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactggaaaaatcg 69727  T
Q  330 tggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    | |||| ||||| ||||||||| ||||||||||| | ||||||| || |||| |||||||||    
T  69726 tagcacaatgggatcgcatcgttgcacgatggtgtgctggcagcgaaaaacagaaacatatt 69665  T

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Target: scaffold0025; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 73536 - 73427
Alignment:
Q  231 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcg 329  Q
    ||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||   |||||||||| ||||||||||||| |    
T  73536 ttaacttaaaatcagatttatgcagaatcgtggcacgatggctaggcaacgtggcacgattggaggtttca-agtttgaggcaaagcactggaaaaattg 73438  T
Q  330 tggcacgatgg 340  Q
    |||||||||||    
T  73437 tggcacgatgg 73427  T

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Target: scaffold0472 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 5927 - 6074
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 322  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| ||||||| |||||||||||||||    
T  5927 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttaggcaaggcactgga 6026  T
Q  323 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggc 370  Q
    |||||||||||| ||||||||| |||| ||||||||||||||| ||||    
T  6027 aaaatcgtggcatgatggggtctcatcatggcacgatggtgcgctggc 6074  T

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Target: scaffold0068 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 314 - 391
Target Start/End: Original strand, 29001 - 29078
Alignment:
Q  314 ggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||| |||||||||    
T  29001 ggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatt 29078  T

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Target: scaffold0068; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 223 - 287
Target Start/End: Original strand, 28941 - 29005
Alignment:
Q  223 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcac 287  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||||    
T  28941 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcac 29005  T

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Target: scaffold0131 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 224 - 391
Target Start/End: Original strand, 14768 - 14936
Alignment:
Q  224 gtgagatttaacttcaaatcagatttatgcat-aatcgtggcacgatggcaaggcaacgtggcacgatgg-aggtttcagtttttgaggcaaggcactgg 321  Q
    |||||| ||||||| |||||||  || ||||  |||||||||||||| | | |||||||||| ||||||| | ||||||||| | |||||||| ||||||    
T  14768 gtgagagttaacttaaaatcaggattctgcaggaatcgtggcacgattgaagggcaacgtggaacgatgggaagtttcagttat-gaggcaagtcactgg 14866  T
Q  322 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    |||  ||||||||||||||| || || |||| |||||||||||| ||||||| ||||||| |||||||||    
T  14867 aaatttcgtggcacgatgggatcacaacgtgacacgatggtgcgctggcagcgaataacagaaacatatt 14936  T

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Target: scaffold0339 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 391
Target Start/End: Original strand, 3872 - 3914
Alignment:
Q  349 cgtggcacgatggtgcggtggcagcaaataacataaacatatt 391  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||    
T  3872 cgtggcacgatggtgcgatggcagcgaataacataaacgtatt 3914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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