View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14507_low_12 (Length: 385)
Name: NF14507_low_12
Description: NF14507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14507_low_12 |
 | |
|
| [»] scaffold0181 (1 HSPs) |
| | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0192 (1 HSPs) |
| | |
|
| [»] scaffold0176 (1 HSPs) |
| | |
|
| [»] scaffold0004 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 25)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 22890710 - 22890931
Alignment:
| Q |
17 |
ataaatgttgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgatatttttattgtcttttgttgtgtagatatgactgag |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22890710 |
ataaatgttgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgatatttttattgtcttttgttgtgtagatatgactgag |
22890809 |
T |
|
| Q |
117 |
aacctacatatgcgtaaagagaccatgacaagcagttcccgcaaggagagagtgacagtgaaccctactaaaatctgcatttccaacgatgtacgtcaca |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22890810 |
aacctacatatgcgtaaagagaccatgacaagcagttcccgcaaggagagagtgacagtgaaccctactaaaatctgcatttccaacgatgtacgtcaca |
22890909 |
T |
|
| Q |
217 |
aactgccaatgcatttaaccaa |
238 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
22890910 |
aactgccaatgcatttaaccaa |
22890931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 315 - 377
Target Start/End: Original strand, 22891008 - 22891070
Alignment:
| Q |
315 |
cagatatagattgtttctttctacatctgctgcacaattcacaaatcatgattttgatgatgt |
377 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22891008 |
cagatatagattgtttctttctacatctgctgcacaattcacaaatcatgattttgatgatgt |
22891070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 149852 - 149907
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||||| || ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
149852 |
tgtatattatgcactccaagtgtttgatgaaatgtttgaatgagtttttcattgat |
149907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 12082695 - 12082750
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12082695 |
tgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttttcattgat |
12082750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 12310033 - 12309978
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12310033 |
tgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttttcattgat |
12309978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 16781421 - 16781480
Alignment:
| Q |
27 |
tatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgatattttt |
86 |
Q |
| |
|
||||||||| ||| ||| |||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
16781421 |
tatattttgcactcaaagtgtttgatgaaatgcttgaatgagtttatcattgattttttt |
16781480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 2356060 - 2356115
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
2356060 |
tgtataatttgcactccaagtatttgatgaaatgtttgaatgagtttttcattgat |
2356115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 17839110 - 17839149
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
17839110 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
17839149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 21650310 - 21650349
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
21650310 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
21650349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 26926280 - 26926335
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
26926280 |
tgtataatttgcactccaagtgtttgatgaaatatttgaatgagtttttcattgat |
26926335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 34140652 - 34140691
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
34140652 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
34140691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 36394244 - 36394205
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
36394244 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
36394205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 40588336 - 40588375
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
40588336 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
40588375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 42682743 - 42682782
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
42682743 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
42682782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 48221178 - 48221123
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||||||| |||| ||||||| ||||| | ||||||||||||||||||| |
|
|
| T |
48221178 |
tgtataatttgtactccaagtgtttgataaaatgttggaatgagtttttcattgat |
48221123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 3381095 - 3381061
Alignment:
| Q |
46 |
gtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
3381095 |
gtttgatgaaatgtttgaatgagtttttcattgat |
3381061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 7414444 - 7414390
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattga |
79 |
Q |
| |
|
|||||| ||| |||| ||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
7414444 |
tgtataatttttactcgaagtgtttgatgaaatgtttgaatgagtttttcattga |
7414390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 28979443 - 28979377
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgatatttttattgtcttttgttgtgtagat |
107 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||| ||| ||||| || | | || |||||||||| |
|
|
| T |
28979443 |
caagtgtttgatgaaatgtttgaatgagtttttcatcgattttttttttatttcttattgtgtagat |
28979377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 45363658 - 45363624
Alignment:
| Q |
46 |
gtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
45363658 |
gtttgatgaaatgtttgaatgagtttttcattgat |
45363624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 41048577 - 41048622
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgatattttt |
86 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||| ||||| ||||| |
|
|
| T |
41048577 |
caagtgtttgatgaaatgtttgaatgagtttttcgttgattttttt |
41048622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 46862614 - 46862569
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgatattttt |
86 |
Q |
| |
|
|||| ||||||||||||| |||||||||| |||||||||| ||||| |
|
|
| T |
46862614 |
caagtgtttgatgaaatgtttgaatgagtatttcattgattttttt |
46862569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 48270435 - 48270472
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattg |
78 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
48270435 |
caagtgtttgatgaaatgtttgaatgagtttttcattg |
48270472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 7062007 - 7062059
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcatt |
77 |
Q |
| |
|
|||||| |||| ||| |||| |||| |||||||| |||||||||||||||||| |
|
|
| T |
7062007 |
tgtataatttgcactccaagtgtttaatgaaatgtttgaatgagtttttcatt |
7062059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 13916621 - 13916657
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcatt |
77 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
13916621 |
caagtgtttgatgaaatgtttgaatgagtttttcatt |
13916657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 48315591 - 48315559
Alignment:
| Q |
46 |
gtttgatgaaatgcttgaatgagtttttcattg |
78 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |
|
|
| T |
48315591 |
gtttgatgaaatgtttgaatgagtttttcattg |
48315559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 19)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 17955104 - 17955204
Alignment:
| Q |
20 |
aatgttgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgatatttttattgtcttttgttgtgtagatatgactgagaac |
119 |
Q |
| |
|
|||||||||| |||| | || ||| || |||| ||||| |||||||||||||||||| || |||| ||||| |||||||||||||||||| ||||||| |
|
|
| T |
17955104 |
aatgttgtatgttttacattaaaagtgtctgataaaatgtttgaatgagtttttcattaattttttcattgttttttgttgtgtagatatgtatgagaac |
17955203 |
T |
|
| Q |
120 |
c |
120 |
Q |
| |
|
| |
|
|
| T |
17955204 |
c |
17955204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 3941526 - 3941565
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
3941526 |
caagcgtttgatgaaatgtttgaatgagtttttcattgat |
3941565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 31992355 - 31992321
Alignment:
| Q |
46 |
gtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
31992355 |
gtttgatgaaatgcttgaatgagtttttcattgat |
31992321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 38417547 - 38417485
Alignment:
| Q |
24 |
ttgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgatattttt |
86 |
Q |
| |
|
||||||||||| ||| |||| |||||||||||||||||||||| ||||| |||||| ||||| |
|
|
| T |
38417547 |
ttgtatattttacacttcaagtgtttgatgaaatgcttgaatgaattttttattgattttttt |
38417485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 19472052 - 19472012
Alignment:
| Q |
40 |
acaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
19472052 |
acaagtgtttgatgaaatgtttgaatgagtttttcattgat |
19472012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 40679027 - 40678987
Alignment:
| Q |
46 |
gtttgatgaaatgcttgaatgagtttttcattgatattttt |
86 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
40679027 |
gtttgatgaaatgtttgaatgagtttttcattgattttttt |
40678987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 10365054 - 10365015
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10365054 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
10365015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 16253249 - 16253304
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
16253249 |
tgtataatttgcactccaagtgtttgataaaatgtttgaatgagtttttcattgat |
16253304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 16706740 - 16706795
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| ||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
16706740 |
tgtataatttgcactctaagtgtttgatgaaatgtttgaatgagtttttcattgat |
16706795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 18878281 - 18878336
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
18878281 |
tgtataatttgcactccaagtgttcgatgaaatgtttgaatgagtttttcattgat |
18878336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 26617900 - 26617861
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26617900 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
26617861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 26858963 - 26859002
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26858963 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
26859002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 29110932 - 29110987
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| |||||||||| || ||||||||||||||||||||| |
|
|
| T |
29110932 |
tgtataatttgcactccaagtgtttgatgaattgtttgaatgagtttttcattgat |
29110987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 35491424 - 35491463
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
35491424 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
35491463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 37058633 - 37058687
Alignment:
| Q |
26 |
gtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||||||| ||| ||| |||| |||||||| ||||||||||||||||||||| |
|
|
| T |
37058633 |
gtatattttgcactttaagtgtttaatgaaatgtttgaatgagtttttcattgat |
37058687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 16581287 - 16581332
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgatattttt |
86 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||| ||| ||||| |
|
|
| T |
16581287 |
caagtgtttgatgaaatgtttgaatgagtttttcatcgattttttt |
16581332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 31770135 - 31770191
Alignment:
| Q |
24 |
ttgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||| |||| || |||| ||||||||||||| |||||||||||||||| |||| |
|
|
| T |
31770135 |
ttgtataatttgcacatcaagtgtttgatgaaatgtttgaatgagtttttcaatgat |
31770191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 33403806 - 33403846
Alignment:
| Q |
40 |
acaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||| ||||||||||||| || |||||||||||||||||| |
|
|
| T |
33403806 |
acaagtgtttgatgaaatgtttcaatgagtttttcattgat |
33403846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 41499498 - 41499462
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcatt |
77 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
41499498 |
caagtgtttgatgaaatgtttgaatgagtttttcatt |
41499462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 17)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 34595095 - 34595150
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
34595095 |
tgtataatttgtactacaaatgtttgatgaaatgtttgaatgagtttttcattgat |
34595150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 13706978 - 13706918
Alignment:
| Q |
20 |
aatgttgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||||||||| ||| ||| |||| |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
13706978 |
aatgttgtatatattgcacttcaagtgtttgatggaatgcctgaatgagtttttcattgat |
13706918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 34144364 - 34144277
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgatattttt--attgtcttttgttgtgtagatatgactgagaacctacata |
126 |
Q |
| |
|
|||| |||| ||||||| | ||||||||||||| |||||| ||||| ||||| |||||||||||||||||| |||| |||| ||||| |
|
|
| T |
34144364 |
caagtgttttatgaaattcctgaatgagtttttaattgattttttttcattgttttttgttgtgtagatatggctgacaacccacata |
34144277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 15798527 - 15798472
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
15798527 |
tgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttttcattgat |
15798472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 16418531 - 16418476
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
16418531 |
tgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttttcattgat |
16418476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 28717846 - 28717901
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||||| ||| |||| ||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
28717846 |
tgtatattttgcactccaagtgttagatgaaatgtttgaatgagtttttcattgat |
28717901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 1400725 - 1400680
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgatattttt |
86 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
1400725 |
caagtgtttgatgaaatgtttgaatgagtttttcattgattttttt |
1400680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 3601125 - 3601164
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
3601125 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
3601164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 7082060 - 7082115
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| |||||||||| || ||||||||||||||||||||| |
|
|
| T |
7082060 |
tgtataatttgcactccaagtgtttgatgaattgtttgaatgagtttttcattgat |
7082115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 8537734 - 8537773
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
8537734 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
8537773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 12742484 - 12742539
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| |||| |||||||| ||||||||||||||||||||| |
|
|
| T |
12742484 |
tgtataatttgcacttcaagtgtttaatgaaatgtttgaatgagtttttcattgat |
12742539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 12805302 - 12805357
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| |||| |||||||| ||||||||||||||||||||| |
|
|
| T |
12805302 |
tgtataatttgcacttcaagtgtttaatgaaatgtttgaatgagtttttcattgat |
12805357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 33370422 - 33370477
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| | || ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
33370422 |
tgtataatttgcactccgagtgtttgatgaaatgtttgaatgagtttttcattgat |
33370477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 35565056 - 35565095
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
35565056 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
35565095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 35927859 - 35927820
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
35927859 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
35927820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 2599008 - 2599042
Alignment:
| Q |
46 |
gtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2599008 |
gtttgatgaaatgtttgaatgagtttttcattgat |
2599042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 25498162 - 25498214
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcatt |
77 |
Q |
| |
|
|||||| ||||||| |||| ||||||||||||| |||||||| ||||||||| |
|
|
| T |
25498162 |
tgtataatttgtacatcaagtgtttgatgaaatgtttgaatgaatttttcatt |
25498214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 30)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 23124970 - 23124915
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||||| ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
23124970 |
tgtatattttgcactccaagtgtttgatgaaatgtttgaatgagtttttcattgat |
23124915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 44100114 - 44100169
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||||||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
44100114 |
tgtataatttgtactccaagtgtttgatgaaatgtttgaatgagtttttcattgat |
44100169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 373
Target Start/End: Original strand, 18049941 - 18049989
Alignment:
| Q |
325 |
ttgtttctttctacatctgctgcacaattcacaaatcatgattttgatg |
373 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||| ||||||||| |
|
|
| T |
18049941 |
ttgtttctttctacatctgttgtacaattcacaaatcatcattttgatg |
18049989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 3510867 - 3510812
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||||| ||| |||| ||||||||||||| |||||||| |||||||||||| |
|
|
| T |
3510867 |
tgtatattttgcactccaagtgtttgatgaaatgtttgaatgaatttttcattgat |
3510812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 8351895 - 8351840
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||| | |||||| | |||||||||||||||||||||||||||| |||||| |
|
|
| T |
8351895 |
tgtatatttagcactacatgtgtttgatgaaatgcttgaatgagttttttattgat |
8351840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 20759575 - 20759520
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
20759575 |
tgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttttcattgat |
20759520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 20765966 - 20765911
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
20765966 |
tgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttttcattgat |
20765911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 32938340 - 32938285
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
32938340 |
tgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttttcattgat |
32938285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 24074875 - 24074929
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattga |
79 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
24074875 |
tgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttttcattga |
24074929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 29699736 - 29699691
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgatattttt |
86 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
29699736 |
caagtgtttgatgaaatgtttgaatgagtttttcattgattttttt |
29699691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 49424181 - 49424136
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgatattttt |
86 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
49424181 |
caagtgtttgatgaaatgtttgaatgagtttttcattgattttttt |
49424136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 1225936 - 1225984
Alignment:
| Q |
32 |
tttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1225936 |
tttgcactccaagtgtttgatgaaatgtttgaatgagtttttcattgat |
1225984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 957877 - 957838
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
957877 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
957838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 1042536 - 1042575
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1042536 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
1042575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 6282745 - 6282706
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
6282745 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
6282706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 9489464 - 9489503
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
9489464 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
9489503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 12587416 - 12587471
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||||| ||| |||| ||||||||||||| |||||||| ||||| |||||| |
|
|
| T |
12587416 |
tgtatattttgcactccaagtgtttgatgaaatgtttgaatgaattttttattgat |
12587471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 14331132 - 14331077
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| |||||||||| || ||||||||||||||||||||| |
|
|
| T |
14331132 |
tgtataatttgcactccaagtgtttgatgaattgtttgaatgagtttttcattgat |
14331077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 17211035 - 17211090
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
17211035 |
tgtataatttgcacttcaagtgtttgatgaaatgtttgtatgagtttttcattgat |
17211090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 20779307 - 20779252
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| |||||||||| || ||||||||||||||||||||| |
|
|
| T |
20779307 |
tgtataatttgcactccaagtgtttgatgaactgtttgaatgagtttttcattgat |
20779252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 21711329 - 21711384
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| |||||||||| || ||||||||||||||||||||| |
|
|
| T |
21711329 |
tgtataatttgcactccaagtgtttgatgaattgtttgaatgagtttttcattgat |
21711384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 24606537 - 24606576
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24606537 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
24606576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 28082023 - 28082062
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28082023 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
28082062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 34153710 - 34153671
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
34153710 |
caagtgtttgatgaaatgattgaatgagtttttcattgat |
34153671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 44560602 - 44560563
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
44560602 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
44560563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 12227905 - 12227871
Alignment:
| Q |
46 |
gtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12227905 |
gtttgatgaaatgtttgaatgagtttttcattgat |
12227871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 39588719 - 39588753
Alignment:
| Q |
46 |
gtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
39588719 |
gtttgatgaaatgtttgaatgagtttttcattgat |
39588753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 42420833 - 42420866
Alignment:
| Q |
47 |
tttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |
|
|
| T |
42420833 |
tttgatgaaatgtttgaatgagtttttcattgat |
42420866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 23950470 - 23950522
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcatt |
77 |
Q |
| |
|
|||||| |||| |||| ||| ||||||||||||| |||||||| ||||||||| |
|
|
| T |
23950470 |
tgtataatttgcactaaaagtgtttgatgaaatgtttgaatgactttttcatt |
23950522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 25144265 - 25144317
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcatt |
77 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| ||||||| |||||||||| |
|
|
| T |
25144265 |
tgtataatttgcactccaagtgtttgatgaaatgtttgaatgtgtttttcatt |
25144317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 21)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 373
Target Start/End: Complemental strand, 4395385 - 4395337
Alignment:
| Q |
325 |
ttgtttctttctacatctgctgcacaattcacaaatcatgattttgatg |
373 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||| ||||||||| |
|
|
| T |
4395385 |
ttgtttctttctacatctgttgtacaattcacaaatcatcattttgatg |
4395337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 25156294 - 25156239
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||||||| |||| ||||||||||||| |||||||| |||||||||||| |
|
|
| T |
25156294 |
tgtataatttgtactccaagtgtttgatgaaatgtttgaatgattttttcattgat |
25156239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 33449578 - 33449523
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
33449578 |
tgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttttcattgat |
33449523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 4095565 - 4095626
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgatattttt |
86 |
Q |
| |
|
|||||| |||| ||| ||| ||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
4095565 |
tgtataatttgcactcaaagtgtttgatgaaatgtttgaatgagtttttcattgattttttt |
4095626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 7953997 - 7954041
Alignment:
| Q |
36 |
tactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7953997 |
tactccaagtgtttgatgaaatgtttgaatgagtttttcattgat |
7954041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 4004507 - 4004468
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4004507 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
4004468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 6464765 - 6464726
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
6464765 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
6464726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 24702691 - 24702652
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24702691 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
24702652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 29635358 - 29635303
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| |||||||| |||||||||||| |
|
|
| T |
29635358 |
tgtataatttgcacttcaagtgtttgatgaaatgtttgaatgactttttcattgat |
29635303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 37281235 - 37281290
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| |||||||||| || ||||||||||||||||||||| |
|
|
| T |
37281235 |
tgtataatttgcactccaagtgtttgatgaattgtttgaatgagtttttcattgat |
37281290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 41577727 - 41577766
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
41577727 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
41577766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 49219156 - 49219117
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
49219156 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
49219117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 49610288 - 49610327
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
49610288 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
49610327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 52569828 - 52569789
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
52569828 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
52569789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 774753 - 774719
Alignment:
| Q |
46 |
gtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
774753 |
gtttgatgaaatgtttgaatgagtttttcattgat |
774719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 2268908 - 2268874
Alignment:
| Q |
46 |
gtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2268908 |
gtttgatgaaatgtttgaatgagtttttcattgat |
2268874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 17370605 - 17370639
Alignment:
| Q |
46 |
gtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
17370605 |
gtttgatgaaatgtttgaatgagtttttcattgat |
17370639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 13896290 - 13896245
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgatattttt |
86 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||| ||| ||||| |
|
|
| T |
13896290 |
caagtgtttgatgaaatgtttgaatgagtttttcatcgattttttt |
13896245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 15636829 - 15636862
Alignment:
| Q |
47 |
tttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |
|
|
| T |
15636829 |
tttgatgaaatgtttgaatgagtttttcattgat |
15636862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 45100886 - 45100841
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgatattttt |
86 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||| || ||||| |
|
|
| T |
45100886 |
caagtgtttgatgaaatgtttgaatgagtttttcattaattttttt |
45100841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 19237089 - 19237121
Alignment:
| Q |
47 |
tttgatgaaatgcttgaatgagtttttcattga |
79 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |
|
|
| T |
19237089 |
tttgatgaaatgtttgaatgagtttttcattga |
19237121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0181 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0181
Description:
Target: scaffold0181; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 24676 - 24731
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24676 |
tgtataatttgcacttcaagtgtttgatgaaatgtttgaatgagtttttcattgat |
24731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 16)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 12505156 - 12505101
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12505156 |
tgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttttcattgat |
12505101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 7082465 - 7082526
Alignment:
| Q |
24 |
ttgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgatatttt |
85 |
Q |
| |
|
||||| |||||||||| |||| |||| ||| ||||||||| |||||||||||||||| |||| |
|
|
| T |
7082465 |
ttgtacattttgtactccaagtgtttaatggaatgcttgattgagtttttcattgatttttt |
7082526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 3589689 - 3589638
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcat |
76 |
Q |
| |
|
|||||| |||||||| |||| ||||||||||||| |||||||| |||||||| |
|
|
| T |
3589689 |
tgtataatttgtactccaagtgtttgatgaaatgtttgaatgaatttttcat |
3589638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 8751546 - 8751601
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
8751546 |
tgtataatttgcactccaagtgtttgatcaaatgtttgaatgagtttttcattgat |
8751601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 16575487 - 16575526
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
16575487 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
16575526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 18440714 - 18440675
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
18440714 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
18440675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 22843775 - 22843720
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
22843775 |
tgtataatttgcactccaagtgtccgatgaaatgcttgaatgagtttttcattgat |
22843720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 24861138 - 24861177
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24861138 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
24861177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 26452120 - 26452159
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26452120 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
26452159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 37780438 - 37780477
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
37780438 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
37780477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 40702155 - 40702194
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
40702155 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
40702194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 41275189 - 41275228
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
41275189 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
41275228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 41857393 - 41857354
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
41857393 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
41857354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 42603249 - 42603288
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
42603249 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
42603288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 25222420 - 25222460
Alignment:
| Q |
46 |
gtttgatgaaatgcttgaatgagtttttcattgatattttt |
86 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||| ||||| |
|
|
| T |
25222420 |
gtttgatgaaatgcttgaatgatttttttattgattttttt |
25222460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 32109363 - 32109311
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcatt |
77 |
Q |
| |
|
||||||||||| | | |||| ||||| ||||||| |||||||||||||||||| |
|
|
| T |
32109363 |
tgtatattttgcattccaagtgtttggtgaaatgtttgaatgagtttttcatt |
32109311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 5973459 - 5973408
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcat |
76 |
Q |
| |
|
|||||| |||||||| |||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
5973459 |
tgtataatttgtacttcaagtgtttgatgaaatgtttgaatgagtttttcat |
5973408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 20242571 - 20242516
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| | |||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
20242571 |
tgtataatttgcattacaagtgtttgatgaaatgtttgaatgagtttttcattgat |
20242516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 22136555 - 22136500
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| | |||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
22136555 |
tgtataatttgcattacaagtgtttgatgaaatgtttgaatgagtttttcattgat |
22136500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 33718835 - 33718886
Alignment:
| Q |
29 |
tattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||| ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
33718835 |
tattttgcacttcaagtgtttgatgaaatgtttgaatgagtttttcattgat |
33718886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 34132355 - 34132410
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
34132355 |
tgtataatttgcacttcaagtgtttgatgaaatgtttgaatgagtttttcattgat |
34132410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 3097942 - 3097888
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattga |
79 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
3097942 |
tgtataatttgcactccaagtgtttgatgaaatgtttgaatgagtttttcattga |
3097888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 3766141 - 3766096
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgatattttt |
86 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
3766141 |
caagtgtttgatgaaatgtttgaatgagtttttcattgatagtttt |
3766096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 34803316 - 34803271
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgatattttt |
86 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
34803316 |
caagtgtttgatgaaatgtttgaatgagtttttcattgattttttt |
34803271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 18744399 - 18744343
Alignment:
| Q |
24 |
ttgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||| ||| ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
18744399 |
ttgtataattttcactccaagtgtttgatgaaatgtttgaatgagtttttcattgat |
18744343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 13402322 - 13402361
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
13402322 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
13402361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 17465712 - 17465657
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| |||||||||||||||| |||| |
|
|
| T |
17465712 |
tgtatagtttgaactccaagtgtttgatgaaatgtttgaatgagtttttcaatgat |
17465657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 26856459 - 26856507
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagttttt |
73 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| |||||||||||||| |
|
|
| T |
26856459 |
tgtataatttgcactccaagtgtttgatgaaatgtttgaatgagttttt |
26856507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 28051196 - 28051228
Alignment:
| Q |
47 |
tttgatgaaatgcttgaatgagtttttcattga |
79 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |
|
|
| T |
28051196 |
tttgatgaaatgtttgaatgagtttttcattga |
28051228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 36; Significance: 0.00000000004; HSPs: 24)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 21760805 - 21760750
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
21760805 |
tgtataatttgcacttcaagtgtttgatgaaatgtttgaatgagtttttcattgat |
21760750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 26793077 - 26793132
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||||||| |||| ||||||||||||| |||||||| |||||||||||| |
|
|
| T |
26793077 |
tgtataatttgtactccaagtgtttgatgaaatgtttgaatgaatttttcattgat |
26793132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 39900342 - 39900287
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||| |||||||||| |||| ||||| |
|
|
| T |
39900342 |
tgtatattttgcactacaagtgtttgatgaaatgtttgaatgagtatttctttgat |
39900287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 36909346 - 36909391
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgatattttt |
86 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
36909346 |
caagtgtttgatgaaatgtttgaatgagtttttcattgattttttt |
36909391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 21485071 - 21485019
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcatt |
77 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
21485071 |
tgtataatttgcactgcaagtgtttgatgaaatgtttgaatgagtttttcatt |
21485019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 373
Target Start/End: Original strand, 32502890 - 32502938
Alignment:
| Q |
325 |
ttgtttctttctacatctgctgcacaattcacaaatcatgattttgatg |
373 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||| ||||||||| |
|
|
| T |
32502890 |
ttgtttctttctacatctattgtacaattcacaaatcatcattttgatg |
32502938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 4209036 - 4209075
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4209036 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
4209075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 5764975 - 5765030
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| |||||||||||||| |||||| |
|
|
| T |
5764975 |
tgtataatttgcactccaagtgtttgatgaaatgtttgaatgagttttttattgat |
5765030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 13972710 - 13972749
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
13972710 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
13972749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 16077577 - 16077632
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| | |||| | ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
16077577 |
tgtataatttgcattacaggtgtttgatgaaatgtttgaatgagtttttcattgat |
16077632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 16532478 - 16532423
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||||| |||| |||||||||||||||| |
|
|
| T |
16532478 |
tgtataatttgcactccaagtgtttgatgaaatgtttgactgagtttttcattgat |
16532423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 19262798 - 19262759
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
19262798 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
19262759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 24364189 - 24364150
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24364189 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
24364150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 27259714 - 27259753
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
27259714 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
27259753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 34335972 - 34336027
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| ||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
34335972 |
tgtataatttgcactctaagtgtttgatgaaatgtttgaatgagtttttcattgat |
34336027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 39224634 - 39224579
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| |||||||||| || ||||||||||||||||||||| |
|
|
| T |
39224634 |
tgtataatttgcactccaagtgtttgatgaattgtttgaatgagtttttcattgat |
39224579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 44337740 - 44337701
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
44337740 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
44337701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 44597486 - 44597525
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
44597486 |
caagtgtttgatgaaatgattgaatgagtttttcattgat |
44597525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 48707353 - 48707298
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||||| |||| ||| |||| | ||||||||||| ||||||||||||||||||||| |
|
|
| T |
48707353 |
tgtataatttgcactccaagtgcttgatgaaatgtttgaatgagtttttcattgat |
48707298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 49396489 - 49396528
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
49396489 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
49396528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 49427173 - 49427212
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
49427173 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
49427212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 14174174 - 14174133
Alignment:
| Q |
46 |
gtttgatgaaatgcttgaatgagtttttcattgatattttta |
87 |
Q |
| |
|
||||||||||||| |||||||||||| |||||||| |||||| |
|
|
| T |
14174174 |
gtttgatgaaatgtttgaatgagtttctcattgattttttta |
14174133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 16098352 - 16098316
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcatt |
77 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
16098352 |
caagtgtttgatgaaatgtttgaatgagtttttcatt |
16098316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 42572190 - 42572158
Alignment:
| Q |
48 |
ttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |
|
|
| T |
42572190 |
ttgatgaaatgtttgaatgagtttttcattgat |
42572158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 777 - 832
Alignment:
| Q |
25 |
tgtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||||||||| ||| |||| ||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
777 |
tgtatattttgcactccaagtgtttgattaaatgtttgaatgagttttttattgat |
832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0192 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0192
Description:
Target: scaffold0192; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 18314 - 18275
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
18314 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
18275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0176 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0176
Description:
Target: scaffold0176; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 1577 - 1616
Alignment:
| Q |
41 |
caagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1577 |
caagtgtttgatgaaatgtttgaatgagtttttcattgat |
1616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 39647 - 39701
Alignment:
| Q |
26 |
gtatattttgtactacaagcgtttgatgaaatgcttgaatgagtttttcattgat |
80 |
Q |
| |
|
||||| |||| ||| |||| ||||||||||||| |||||||||||||| |||||| |
|
|
| T |
39647 |
gtataatttgcactccaagtgtttgatgaaatgtttgaatgagttttttattgat |
39701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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