View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14507_low_2 (Length: 651)

Name: NF14507_low_2
Description: NF14507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14507_low_2
NF14507_low_2
[»] chr6 (53 HSPs)
chr6 (288-635)||(26828594-26828941)
chr6 (24-143)||(31248544-31248662)
chr6 (24-143)||(3577338-3577460)
chr6 (24-143)||(25941878-25942000)
chr6 (24-146)||(13883687-13883809)
chr6 (38-143)||(25465754-25465859)
chr6 (24-143)||(13878951-13879070)
chr6 (24-143)||(35201157-35201274)
chr6 (142-349)||(26641396-26641610)
chr6 (142-349)||(26747362-26747576)
chr6 (45-143)||(17694701-17694799)
chr6 (24-146)||(30987353-30987473)
chr6 (24-143)||(26887077-26887195)
chr6 (39-143)||(16786161-16786264)
chr6 (24-126)||(17038449-17038550)
chr6 (40-143)||(33216055-33216159)
chr6 (40-131)||(12166010-12166102)
chr6 (390-524)||(26641207-26641334)
chr6 (390-524)||(26747173-26747300)
chr6 (24-144)||(13467317-13467441)
chr6 (24-143)||(22351704-22351826)
chr6 (24-143)||(19701757-19701879)
chr6 (24-143)||(22342652-22342774)
chr6 (65-139)||(5165697-5165772)
chr6 (40-125)||(26643399-26643483)
chr6 (40-125)||(26749365-26749449)
chr6 (522-633)||(26640893-26641006)
chr6 (522-633)||(26746859-26746972)
chr6 (24-141)||(17066057-17066179)
chr6 (90-143)||(10584359-10584413)
chr6 (90-145)||(5273053-5273108)
chr6 (89-145)||(3629709-3629765)
chr6 (65-98)||(5165772-5165805)
chr6 (445-514)||(26890864-26890933)
chr6 (90-146)||(12195351-12195406)
chr6 (522-554)||(26853950-26853982)
chr6 (527-566)||(27652025-27652064)
chr6 (84-145)||(7294201-7294262)
chr6 (90-143)||(26065403-26065457)
chr6 (90-144)||(26065960-26066013)
chr6 (90-143)||(26085372-26085426)
chr6 (517-567)||(27422372-27422422)
chr6 (533-567)||(27713841-27713875)
chr6 (522-572)||(31289527-31289577)
chr6 (90-143)||(8717195-8717247)
chr6 (90-143)||(11982872-11982924)
chr6 (90-143)||(26068235-26068287)
chr6 (89-143)||(28037576-28037631)
chr6 (90-143)||(29754549-29754601)
chr6 (522-566)||(26631735-26631779)
chr6 (522-566)||(26737710-26737754)
chr6 (522-554)||(26966392-26966424)
chr6 (526-554)||(27713930-27713958)
[»] scaffold0131 (1 HSPs)
scaffold0131 (24-143)||(17706-17824)
[»] chr7 (33 HSPs)
chr7 (24-143)||(25405627-25405745)
chr7 (24-143)||(25351561-25351683)
chr7 (24-143)||(7070008-7070126)
chr7 (24-146)||(3319866-3319988)
chr7 (24-144)||(7075009-7075128)
chr7 (38-143)||(7464365-7464470)
chr7 (39-144)||(30247198-30247304)
chr7 (24-144)||(8378356-8378473)
chr7 (24-143)||(3324637-3324756)
chr7 (24-143)||(15540844-15540963)
chr7 (24-144)||(44143721-44143843)
chr7 (25-143)||(2075320-2075436)
chr7 (39-141)||(34546734-34546835)
chr7 (24-143)||(44016514-44016637)
chr7 (26-143)||(25357257-25357378)
chr7 (24-144)||(2121108-2121230)
chr7 (26-141)||(25410344-25410463)
chr7 (24-143)||(44010603-44010726)
chr7 (40-143)||(42006888-42006992)
chr7 (24-141)||(21369848-21369970)
chr7 (84-143)||(44512363-44512423)
chr7 (90-143)||(24748981-24749035)
chr7 (90-143)||(443989-444044)
chr7 (90-145)||(1606775-1606829)
chr7 (84-143)||(6067048-6067107)
chr7 (93-143)||(7349117-7349167)
chr7 (93-143)||(7351491-7351541)
chr7 (90-144)||(25542924-25542977)
chr7 (90-143)||(31434892-31434946)
chr7 (24-80)||(44512439-44512499)
chr7 (90-143)||(18345937-18345989)
chr7 (90-143)||(20297758-20297810)
chr7 (90-143)||(38394382-38394434)
[»] chr4 (35 HSPs)
chr4 (24-143)||(15831360-15831478)
chr4 (24-143)||(18587176-18587298)
chr4 (24-143)||(15312526-15312649)
chr4 (24-143)||(16688794-16688916)
chr4 (24-143)||(8529477-8529600)
chr4 (24-143)||(11853778-11853897)
chr4 (24-143)||(55822472-55822591)
chr4 (24-143)||(16489558-16489681)
chr4 (24-143)||(4558516-4558639)
chr4 (24-143)||(15317167-15317290)
chr4 (41-143)||(4885100-4885202)
chr4 (24-143)||(4555915-4556036)
chr4 (24-143)||(7050125-7050246)
chr4 (42-143)||(4570320-4570420)
chr4 (24-143)||(47566698-47566821)
chr4 (24-144)||(36771602-36771726)
chr4 (40-138)||(36769704-36769803)
chr4 (88-143)||(31300677-31300732)
chr4 (24-143)||(16639032-16639154)
chr4 (24-73)||(31300629-31300681)
chr4 (55-143)||(16631425-16631511)
chr4 (394-523)||(18682666-18682788)
chr4 (39-144)||(25613809-25613915)
chr4 (90-144)||(47563194-47563249)
chr4 (90-143)||(18709003-18709056)
chr4 (90-143)||(40637513-40637566)
chr4 (84-143)||(16185686-16185746)
chr4 (90-143)||(18311215-18311269)
chr4 (90-143)||(18409192-18409246)
chr4 (93-141)||(25358073-25358122)
chr4 (90-143)||(51015685-51015738)
chr4 (67-143)||(4874336-4874410)
chr4 (100-143)||(24879427-24879471)
chr4 (100-143)||(24880891-24880935)
chr4 (84-143)||(47078702-47078762)
[»] chr3 (44 HSPs)
chr3 (24-143)||(6303524-6303642)
chr3 (24-143)||(10099924-10100042)
chr3 (24-143)||(10093923-10094041)
chr3 (24-143)||(10200805-10200923)
chr3 (24-143)||(10897214-10897336)
chr3 (24-143)||(22625829-22625947)
chr3 (24-143)||(10594883-10595006)
chr3 (24-143)||(54193439-54193557)
chr3 (25-143)||(27544504-27544619)
chr3 (24-144)||(5858753-5858875)
chr3 (24-143)||(11079724-11079845)
chr3 (24-143)||(20031170-20031293)
chr3 (40-143)||(29897527-29897631)
chr3 (24-143)||(54188723-54188841)
chr3 (26-143)||(29913805-29913925)
chr3 (24-144)||(3330098-3330222)
chr3 (38-144)||(4535841-4535947)
chr3 (45-143)||(10612627-10612725)
chr3 (24-143)||(27761840-27761962)
chr3 (24-144)||(10949114-10949236)
chr3 (24-143)||(47882738-47882859)
chr3 (24-143)||(48390152-48390276)
chr3 (24-137)||(47878033-47878147)
chr3 (24-110)||(16462406-16462495)
chr3 (50-143)||(38003103-38003195)
chr3 (60-131)||(7418306-7418378)
chr3 (24-142)||(13893668-13893789)
chr3 (84-144)||(16997150-16997210)
chr3 (84-141)||(1620313-1620370)
chr3 (90-143)||(36871149-36871202)
chr3 (90-136)||(53468302-53468349)
chr3 (90-144)||(747125-747178)
chr3 (83-143)||(14634291-14634350)
chr3 (90-143)||(24980073-24980126)
chr3 (90-144)||(50494365-50494418)
chr3 (90-143)||(51674608-51674662)
chr3 (90-143)||(10621366-10621418)
chr3 (90-143)||(25389273-25389326)
chr3 (90-146)||(27635494-27635551)
chr3 (90-143)||(28412870-28412922)
chr3 (90-143)||(31151702-31151754)
chr3 (90-143)||(38210737-38210789)
chr3 (100-144)||(39715839-39715884)
chr3 (90-145)||(1626523-1626579)
[»] chr2 (26 HSPs)
chr2 (24-143)||(33670817-33670936)
chr2 (24-143)||(39680257-39680377)
chr2 (24-143)||(39687201-39687321)
chr2 (24-143)||(45679935-45680054)
chr2 (24-143)||(2736417-2736536)
chr2 (39-141)||(12781075-12781177)
chr2 (39-143)||(27517491-27517594)
chr2 (26-143)||(17943747-17943867)
chr2 (24-144)||(22712373-22712495)
chr2 (24-143)||(22717083-22717204)
chr2 (24-131)||(2741153-2741260)
chr2 (24-143)||(17462650-17462767)
chr2 (24-143)||(20054610-20054735)
chr2 (24-143)||(37170607-37170729)
chr2 (24-143)||(20049866-20049991)
chr2 (38-143)||(38191241-38191345)
chr2 (24-141)||(30479203-30479322)
chr2 (88-143)||(28458693-28458751)
chr2 (89-143)||(7462789-7462844)
chr2 (90-143)||(17849474-17849528)
chr2 (90-143)||(19007997-19008051)
chr2 (90-143)||(22287181-22287234)
chr2 (90-144)||(36558720-36558773)
chr2 (90-143)||(42923293-42923346)
chr2 (90-143)||(42923351-42923404)
chr2 (90-143)||(36560981-36561033)
[»] chr1 (23 HSPs)
chr1 (24-143)||(9521938-9522056)
chr1 (24-143)||(2232807-2232926)
chr1 (26-143)||(21353197-21353318)
chr1 (24-143)||(2393133-2393253)
chr1 (24-143)||(9526679-9526796)
chr1 (24-137)||(4144543-4144660)
chr1 (39-143)||(25134295-25134399)
chr1 (24-143)||(2401074-2401194)
chr1 (62-143)||(3090960-3091039)
chr1 (90-144)||(13215465-13215519)
chr1 (90-143)||(25860252-25860306)
chr1 (93-145)||(13762225-13762277)
chr1 (101-143)||(2510184-2510226)
chr1 (90-148)||(10399664-10399722)
chr1 (85-143)||(13785107-13785164)
chr1 (90-144)||(23786226-23786279)
chr1 (90-143)||(28206912-28206965)
chr1 (90-143)||(50078635-50078689)
chr1 (90-143)||(9459277-9459329)
chr1 (90-143)||(9463104-9463156)
chr1 (90-143)||(16226555-16226607)
chr1 (90-143)||(16231950-16232002)
chr1 (93-149)||(24326052-24326107)
[»] chr8 (25 HSPs)
chr8 (24-140)||(4812336-4812451)
chr8 (24-143)||(25684853-25684972)
chr8 (24-143)||(16752374-16752493)
chr8 (24-143)||(16757110-16757229)
chr8 (24-143)||(28895715-28895832)
chr8 (24-143)||(28328120-28328239)
chr8 (24-143)||(28332843-28332962)
chr8 (24-143)||(28890978-28891095)
chr8 (24-145)||(3276504-3276628)
chr8 (24-145)||(591005-591128)
chr8 (24-143)||(9020957-9021079)
chr8 (24-143)||(23179410-23179531)
chr8 (24-143)||(17799278-17799400)
chr8 (44-144)||(29554704-29554803)
chr8 (45-125)||(21034100-21034181)
chr8 (24-143)||(26268084-26268207)
chr8 (71-143)||(4823551-4823622)
chr8 (24-131)||(33032860-33032971)
chr8 (24-144)||(30423420-30423542)
chr8 (522-568)||(29269792-29269838)
chr8 (39-143)||(2266936-2267039)
chr8 (90-143)||(3874435-3874487)
chr8 (90-143)||(28251410-28251463)
chr8 (90-143)||(183257-183310)
chr8 (90-143)||(24873039-24873091)
[»] scaffold1050 (1 HSPs)
scaffold1050 (24-143)||(2919-3037)
[»] scaffold0006 (1 HSPs)
scaffold0006 (24-143)||(231328-231445)
[»] chr5 (22 HSPs)
chr5 (24-143)||(42238466-42238588)
chr5 (24-148)||(22673042-22673168)
chr5 (24-141)||(28786607-28786728)
chr5 (40-143)||(35385303-35385406)
chr5 (45-143)||(1240662-1240760)
chr5 (24-143)||(2297849-2297965)
chr5 (24-143)||(1171024-1171142)
chr5 (24-121)||(25452705-25452802)
chr5 (40-143)||(40222993-40223097)
chr5 (24-121)||(25445706-25445803)
chr5 (24-145)||(11962285-11962409)
chr5 (24-144)||(20437126-20437250)
chr5 (24-143)||(16093144-16093268)
chr5 (39-137)||(17841110-17841207)
chr5 (60-143)||(10627611-10627695)
chr5 (90-143)||(37705626-37705680)
chr5 (90-139)||(17818338-17818388)
chr5 (90-143)||(10528937-10528990)
chr5 (96-144)||(15552638-15552686)
chr5 (39-143)||(31782311-31782413)
chr5 (90-143)||(3372977-3373029)
chr5 (84-146)||(15445117-15445177)
[»] scaffold0256 (1 HSPs)
scaffold0256 (24-143)||(16540-16656)
[»] scaffold0209 (1 HSPs)
scaffold0209 (63-143)||(16885-16965)
[»] scaffold0267 (1 HSPs)
scaffold0267 (90-144)||(421-474)
[»] scaffold0349 (2 HSPs)
scaffold0349 (533-567)||(18069-18103)
scaffold0349 (526-554)||(17986-18014)
[»] scaffold0003 (1 HSPs)
scaffold0003 (517-567)||(64941-64991)
[»] scaffold0472 (1 HSPs)
scaffold0472 (90-143)||(6594-6646)


Alignment Details
Target: chr6 (Bit Score: 251; Significance: 1e-139; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 288 - 635
Target Start/End: Complemental strand, 26828941 - 26828594
Alignment:
Q  288 cctctggagtgtgactatacttggtttgaaacgctatctacattgcattgaagtaccataatcaaacacttgaactgagnnnnnnnnnnnnnnnnnnnnn 387  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                         
T  26828941 cctctggagtgtgactatacttggtttgaaacgctatctacattgcattgaagtaccataatcaaacacttgaactgagaaaataaaaaaaaaatatata 26828842  T
Q  388 nnctatgcatccaactttttgaaatggaagttcacatcattgaacatagattgtgatttgtgaggaaccatctttcaatatcacagtatgtacaaacact 487  Q
      |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26828841 aactatgcatccaactttttgaaatggaagtttacgtcattgaacatagattgtgatttgtgaggaactatctttcaatatcacagtatgtacaaacact 26828742  T
Q  488 tgtattcctaaaggcaatttaatcatatgtacatgagccatacagtgttgttgctgctacacaagttgtgtctcagaaaatctgatccttatctgattta 587  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26828741 tgtattcctaaaggcaatttaatcatatgtacatgagccatacagcgttattgcttctacacaagttgtgtctcagaaaatctgatccttatctgattta 26828642  T
Q  588 ctctttccgtacggattggtgaaaacctcgtcctcctccatgcttcat 635  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26828641 ctctttccgtatggattggtgaaaacctcgtcctcctccatgcttcat 26828594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 31248662 - 31248544
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31248662 tttatctcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 31248564  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  31248563 ttctcaacgaattcacaaca 31248544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 3577460 - 3577338
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3577460 tttatctcttgctgtttacttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 3577361  T
Q  121 gttttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||||    
T  3577360 gttttctcaacgaattcacaaca 3577338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 25941878 - 25942000
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25941878 tttatctcttgctgtttatttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgttccacgcatcaagtttttattggtgtg 25941977  T
Q  121 gttttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||||    
T  25941978 gttttctcaacgaattcacaaca 25942000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 13883687 - 13883809
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggt 122  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13883687 tttatctcttgctgtttt-tgtttggattatttgctacccgtttgatttgattacttggtattaatttgctccacgcatcaagttttttattggtgtggt 13883785  T
Q  123 tttctcaacgaattcacaacacaa 146  Q
    ||||||||||||||||||||||||    
T  13883786 tttctcaacgaattcacaacacaa 13883809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 38 - 143
Target Start/End: Complemental strand, 25465859 - 25465754
Alignment:
Q  38 ttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 137  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25465859 ttttttgtttggattatttgctacacgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 25465760  T
Q  138 acaaca 143  Q
    ||||||    
T  25465759 acaaca 25465754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 13878951 - 13879070
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-t 122  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  13878951 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttttttggtgtggtt 13879049  T
Q  123 tttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||    
T  13879050 tttctcaacgaattcacaaca 13879070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 35201274 - 35201157
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  35201274 tttatctcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttg-tattaatttgctccacgcatcaagtttttattagtgtggtt 35201177  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  35201176 ttctcaacgaattcacaaca 35201157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 142 - 349
Target Start/End: Complemental strand, 26641610 - 26641396
Alignment:
Q  142 cacaagttcttactatcctcactccaaaactcatctcccagaattataaacttaaatgtgcattaaaggctgtgttactgctagtactcctcacattaca 241  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||  ||||| |  ||||||||||||||| ||||||||||||||||| ||||    
T  26641610 cacatgttcttactatcctcactccaaaactcttctcccagaattataaacgcaaatgcgtgttaaaggctgtgttattgctagtactcctcacaataca 26641511  T
Q  242 a--acacatttggatgt---tttcattttctttctttgatgtggaaatctccctc--tggagtgtgactatacttggtttgaaacgctatctacattgca 334  Q
    |  |||||||||||| |   |||  |||| || ||||||||||||||||||||||  | ||||||||||||||||| ||||||| || ||||||||| ||    
T  26641510 aacacacatttggatatttatttactttttttcctttgatgtggaaatctccctctatagagtgtgactatacttgttttgaaatgcaatctacattaca 26641411  T
Q  335 ttgaagtaccataat 349  Q
    ||||| |||||||||    
T  26641410 ttgaaataccataat 26641396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 142 - 349
Target Start/End: Complemental strand, 26747576 - 26747362
Alignment:
Q  142 cacaagttcttactatcctcactccaaaactcatctcccagaattataaacttaaatgtgcattaaaggctgtgttactgctagtactcctcacattaca 241  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||  ||||| |  ||||||||||||||| ||||||||||||||||| ||||    
T  26747576 cacatgttcttactatcctcactccaaaactcttctcccagaattataaacgcaaatgcgtgttaaaggctgtgttattgctagtactcctcacaataca 26747477  T
Q  242 a--acacatttggatgt---tttcattttctttctttgatgtggaaatctccctc--tggagtgtgactatacttggtttgaaacgctatctacattgca 334  Q
    |  |||||||||||| |   |||  |||| || ||||||||||||||||||||||  | ||||||||||||||||| ||||||| || ||||||||| ||    
T  26747476 aacacacatttggatatttatttactttttttcctttgatgtggaaatctccctctatagagtgtgactatacttgttttgaaatgcaatctacattaca 26747377  T
Q  335 ttgaagtaccataat 349  Q
    ||||| |||||||||    
T  26747376 ttgaaataccataat 26747362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 17694799 - 17694701
Alignment:
Q  45 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17694799 tttggattatttgctatccgcttgatttgattacttggtattaatttgctccacacatcaagtttttattggtgtggttttctcaacgaattcacaaca 17694701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 30987473 - 30987353
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30987473 tttatctcttgctgttttt-gtttggattatttgctacccacttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggtt 30987376  T
Q  124 ttctcaacgaattcacaacacaa 146  Q
    | |||  ||||||||||||||||    
T  30987375 tcctcgtcgaattcacaacacaa 30987353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 26887195 - 26887077
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    |||||||||||||| |||| |||||||||| |||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  26887195 tttatctcttgctggtttt-gtttggattaattgctacccgcttgttttgattacttgatattaatttgctccacacatcaagtttttattggtgtggtt 26887097  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||| ||||||||||||||    
T  26887096 ttctcgacgaattcacaaca 26887077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 16786161 - 16786264
Alignment:
Q  39 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||| ||||||    
T  16786161 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tcttattgttgtggttttctcaacaaattca 16786259  T
Q  139 caaca 143  Q
    |||||    
T  16786260 caaca 16786264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 17038449 - 17038550
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  17038449 tttatttcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagtttttattggtgtgatt 17038547  T
Q  124 ttc 126  Q
    |||    
T  17038548 ttc 17038550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 33216055 - 33216159
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggttttctcaacgaattca 138  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| |||||||    
T  33216055 ttttgtttggattatttgctacccgcttgatatgattacttggtattaatttgctccacgcatcaagttttttattggtgtggtttttacaaggaattca 33216154  T
Q  139 caaca 143  Q
    |||||    
T  33216155 caaca 33216159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 12166102 - 12166010
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 131  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  12166102 ttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttattattggtgtggttttcacaac 12166010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 390 - 524
Target Start/End: Complemental strand, 26641334 - 26641207
Alignment:
Q  390 ctatgcatccaactttttgaaatggaagttcacatcattgaacatagattgtgatttgtgaggaaccatctttcaatatcacagtatgtacaaacacttg 489  Q
    |||||||||||| ||||||||||||||||||||||||||||||  ||||||||||       ||||||||| |||||||||||||||||| |||||||||    
T  26641334 ctatgcatccaaatttttgaaatggaagttcacatcattgaactgagattgtgat-------gaaccatctgtcaatatcacagtatgtagaaacacttg 26641242  T
Q  490 tattcctaaaggcaatttaatcatatgtacatgag 524  Q
    ||||||||||  ||||||||||||||| |||||||    
T  26641241 tattcctaaaatcaatttaatcatatgaacatgag 26641207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 390 - 524
Target Start/End: Complemental strand, 26747300 - 26747173
Alignment:
Q  390 ctatgcatccaactttttgaaatggaagttcacatcattgaacatagattgtgatttgtgaggaaccatctttcaatatcacagtatgtacaaacacttg 489  Q
    |||||||||||| ||||||||||||||||||||||||||||||  ||||||||||       ||||||||| |||||||||||||||||| |||||||||    
T  26747300 ctatgcatccaaatttttgaaatggaagttcacatcattgaactgagattgtgat-------gaaccatctgtcaatatcacagtatgtagaaacacttg 26747208  T
Q  490 tattcctaaaggcaatttaatcatatgtacatgag 524  Q
    ||||||||||  ||||||||||||||| |||||||    
T  26747207 tattcctaaaatcaatttaatcatatgaacatgag 26747173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 13467441 - 13467317
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatc-aagtttttattggtgt 119  Q
    |||||||||| ||||||   |||||||| || |||||||||||| |||||||||||||||||||||||||| ||||||||||| || |||||||||||||    
T  13467441 tttatctcttactgtttacttttgtttgaatcatttgctacccgtttgatttgattacttggtattaatttactccacgcatcaaattttttattggtgt 13467342  T
Q  120 ggttttctcaacgaattcacaacac 144  Q
    ||||||| |||||||||||||||||    
T  13467341 ggttttcacaacgaattcacaacac 13467317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 22351826 - 22351704
Alignment:
Q  24 tttatctcttgctgttt---tttgttt-ggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgt 119  Q
    |||||||||||||||||   ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  22351826 tttatctcttgctgtttacttttgttttggattatttgttacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgt 22351728  T
Q  120 ggttttctcaacgaattcacaaca 143  Q
    | ||||  ||||||||||||||||    
T  22351727 gatttttacaacgaattcacaaca 22351704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 19701879 - 19701757
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgt 119  Q
    ||||||||||| |||||   |||||||| ||||||||||| ||| |||||||||||||||||| |||||||| |||||||||||||||| ||||||||||    
T  19701879 tttatctcttgttgtttacttttgtttgaattatttgctatccgtttgatttgattacttggt-ttaatttgttccacgcatcaagtttattattggtgt 19701781  T
Q  120 ggttttctcaacgaattcacaaca 143  Q
    ||||||| ||||||||||||||||    
T  19701780 ggttttcacaacgaattcacaaca 19701757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 22342774 - 22342652
Alignment:
Q  24 tttatctcttgctgttt---tttgtt-tggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgt 119  Q
    |||||||||||||||||   |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| ||||||||||||    
T  22342774 tttatctcttgctgtttacttttgttatggattatttgctacccgcttgatttgattatttggtattaatttgctccatacatcaag-ttttattggtgt 22342676  T
Q  120 ggttttctcaacgaattcacaaca 143  Q
    | ||||  ||||||||||||||||    
T  22342675 gatttttacaacgaattcacaaca 22342652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 5165772 - 5165697
Alignment:
Q  65 cttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcac 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  5165772 cttgatttgattacttggtattaatttgctccacgcatcaagtttattattggtgtgtttttcacaacgaattcac 5165697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 26643399 - 26643483
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttt 125  Q
    ||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  26643399 ttttgtttgaattattttctatccgcttgatttcattacttggtattaatttgctccacgcatcaag-ttttattggtgtgctttt 26643483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 26749365 - 26749449
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttt 125  Q
    ||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  26749365 ttttgtttgaattattttctatccgcttgatttcattacttggtattaatttgctccacgcatcaag-ttttattggtgtgctttt 26749449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 522 - 633
Target Start/End: Complemental strand, 26641006 - 26640893
Alignment:
Q  522 gagccatacagtgttgttgctgctacacaagttgtgtctcagaaaatctg--atccttatctgatttactctttccgtacggattggtgaaaacctcgtc 619  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||| ||||  |||||||||||||||||||| || ||| |||||| |||||| | | ||    
T  26641006 gagccatacagtgttgttgcgtctacacaagttctgtctcagaaactctgatatccttatctgatttactctctctgtaaggattgatgaaaatcacatc 26640907  T
Q  620 ctcctccatgcttc 633  Q
     |||||||| ||||    
T  26640906 atcctccattcttc 26640893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 522 - 633
Target Start/End: Complemental strand, 26746972 - 26746859
Alignment:
Q  522 gagccatacagtgttgttgctgctacacaagttgtgtctcagaaaatctg--atccttatctgatttactctttccgtacggattggtgaaaacctcgtc 619  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||| ||||  |||||||||||||||||||| || ||| |||||| |||||| | | ||    
T  26746972 gagccatacagtgttgttgcgtctacacaagttctgtctcagaaactctgatatccttatctgatttactctctctgtaaggattgatgaaaatcacatc 26746873  T
Q  620 ctcctccatgcttc 633  Q
     |||||||| ||||    
T  26746872 atcctccattcttc 26746859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 17066057 - 17066179
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattat-ttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtg 118  Q
    |||||||||||||||||   |||||||| ||||| |||  ||| ||||||||||||| |||| | ||||||| |||||||||||| | ||||||||||||    
T  17066057 tttatctcttgctgtttatttttgtttgaattatattgtcaccagcttgatttgattgcttgattttaatttactccacgcatcaggttttttattggtg 17066156  T
Q  119 tggttttctcaacgaattcacaa 141  Q
    |||||||| ||| ||||||||||    
T  17066157 tggttttcacaatgaattcacaa 17066179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 10584359 - 10584413
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||    
T  10584359 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaaca 10584413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 5273108 - 5273053
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacaca 145  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||||    
T  5273108 ttgctccacacatcaagttgttattggtgtgattttttcatcgaattcacaacaca 5273053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 3629765 - 3629709
Alignment:
Q  89 tttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaacaca 145  Q
    |||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||||    
T  3629765 tttgctccacacatcaagtttgttattggtgtg-ttttctcatcgaattcacaacaca 3629709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 5165805 - 5165772
Alignment:
Q  65 cttgatttgattacttggtattaatttgctccac 98  Q
    ||||||||||||||||||||||||||||||||||    
T  5165805 cttgatttgattacttggtattaatttgctccac 5165772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 445 - 514
Target Start/End: Complemental strand, 26890933 - 26890864
Alignment:
Q  445 ttgtgaggaaccatctttcaatatcacagtatgtacaaacacttgtattcctaaaggcaatttaatcata 514  Q
    |||||| ||||||||| ||| ||||||| ||||||||||| |||||| || |||| |||| |||||||||    
T  26890933 ttgtgatgaaccatctgtcagtatcacaatatgtacaaactcttgtactcttaaaagcaaattaatcata 26890864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 12195406 - 12195351
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacacaa 146  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||||    
T  12195406 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacacaa 12195351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 522 - 554
Target Start/End: Complemental strand, 26853982 - 26853950
Alignment:
Q  522 gagccatacagtgttgttgctgctacacaagtt 554  Q
    |||||||||||||||||||||||||||||||||    
T  26853982 gagccatacagtgttgttgctgctacacaagtt 26853950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 527 - 566
Target Start/End: Original strand, 27652025 - 27652064
Alignment:
Q  527 atacagtgttgttgctgctacacaagttgtgtctcagaaa 566  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  27652025 atacagtgttgttgctgctacgcaagttctgtctcagaaa 27652064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 7294201 - 7294262
Alignment:
Q  84 attaatttgctccacgcatcaagt-ttttattggtgtggttttctcaacgaattcacaacaca 145  Q
    |||||||| |||||| |||||||| ||||||||||||| |||| | |||||||||||||||||    
T  7294201 attaattttctccacacatcaagtattttattggtgtgatttttt-aacgaattcacaacaca 7294262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 26065403 - 26065457
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtg-gttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| |||||||||||  |||||||| |||||||||||||    
T  26065403 ttgctccacacatcaagttgttattggtgtgatttttctcatcgaattcacaaca 26065457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 26066013 - 26065960
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacac 144  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  26066013 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacac 26065960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 26085372 - 26085426
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtg-gttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| |||||||||||  |||||||| |||||||||||||    
T  26085372 ttgctccacacatcaagttgttattggtgtgatttttctcatcgaattcacaaca 26085426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 567
Target Start/End: Original strand, 27422372 - 27422422
Alignment:
Q  517 tacatgagccatacagtgttgttgctgctacacaagttgtgtctcagaaaa 567  Q
    |||| |||||||||||||||||| ||||||| |||||| ||||||| ||||    
T  27422372 tacaagagccatacagtgttgtttctgctactcaagttctgtctcaaaaaa 27422422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 533 - 567
Target Start/End: Original strand, 27713841 - 27713875
Alignment:
Q  533 tgttgttgctgctacacaagttgtgtctcagaaaa 567  Q
    |||||||||||||||||||||| ||||||||||||    
T  27713841 tgttgttgctgctacacaagttctgtctcagaaaa 27713875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 572
Target Start/End: Complemental strand, 31289577 - 31289527
Alignment:
Q  522 gagccatacagtgttgttgctgctacacaagttgtgtctcagaaaatctga 572  Q
    |||||||||||||||||| |||||||||| ||| |||||| |||| |||||    
T  31289577 gagccatacagtgttgtttctgctacacaggttctgtctcggaaactctga 31289527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 8717247 - 8717195
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  8717247 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 8717195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 11982924 - 11982872
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  11982924 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 11982872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 26068287 - 26068235
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  26068287 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 26068235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 28037631 - 28037576
Alignment:
Q  89 tttgctccacgcatcaagt--ttttattggtgtggttttctcaacgaattcacaaca 143  Q
    |||||||||| ||||||||  ||||||||||||| |||| |||||||||||||||||    
T  28037631 tttgctccacacatcaagtatttttattggtgtgatttt-tcaacgaattcacaaca 28037576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 29754601 - 29754549
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  29754601 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 29754549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 522 - 566
Target Start/End: Complemental strand, 26631779 - 26631735
Alignment:
Q  522 gagccatacagtgttgttgctgctacacaagttgtgtctcagaaa 566  Q
    |||||||||| ||||||||| |||||||||||| |||||| ||||    
T  26631779 gagccatacaatgttgttgcagctacacaagttctgtctcggaaa 26631735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 522 - 566
Target Start/End: Complemental strand, 26737754 - 26737710
Alignment:
Q  522 gagccatacagtgttgttgctgctacacaagttgtgtctcagaaa 566  Q
    |||||||||| ||||||||| |||||||||||| |||||| ||||    
T  26737754 gagccatacaatgttgttgcagctacacaagttctgtctcggaaa 26737710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 522 - 554
Target Start/End: Complemental strand, 26966424 - 26966392
Alignment:
Q  522 gagccatacagtgttgttgctgctacacaagtt 554  Q
    |||||||||||| ||||||||||||||||||||    
T  26966424 gagccatacagttttgttgctgctacacaagtt 26966392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 526 - 554
Target Start/End: Original strand, 27713930 - 27713958
Alignment:
Q  526 catacagtgttgttgctgctacacaagtt 554  Q
    |||||||||||||||||||||||||||||    
T  27713930 catacagtgttgttgctgctacacaagtt 27713958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 112; Significance: 3e-56; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 17706 - 17824
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17706 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 17804  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  17805 ttctcaacgaattcacaaca 17824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 3e-56; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 25405627 - 25405745
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25405627 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 25405725  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  25405726 ttctcaacgaattcacaaca 25405745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 25351561 - 25351683
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25351561 tttatctcttgctgtttacttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 25351660  T
Q  121 gttttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||||    
T  25351661 gttttctcaacgaattcacaaca 25351683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 7070008 - 7070126
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7070008 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggtt 7070106  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||| ||||||||||||||    
T  7070107 ttctctacgaattcacaaca 7070126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 3319988 - 3319866
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-t 122  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3319988 tttatctcttgctgttttt-gtttggattaattgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 3319890  T
Q  123 tttctcaacgaattcacaacacaa 146  Q
    ||||||||||||||||||||||||    
T  3319889 tttctcaacgaattcacaacacaa 3319866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 7075009 - 7075128
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  7075009 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaattttctccacgcatcaag-ttttattggtgtgatt 7075107  T
Q  124 ttctcaacgaattcacaacac 144  Q
    ||||| |||||||||||||||    
T  7075108 ttctctacgaattcacaacac 7075128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 38 - 143
Target Start/End: Complemental strand, 7464470 - 7464365
Alignment:
Q  38 ttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 137  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7464470 ttttttttttggattaattgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 7464371  T
Q  138 acaaca 143  Q
    ||||||    
T  7464370 acaaca 7464365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 30247198 - 30247304
Alignment:
Q  39 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggttttctcaacgaattc 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  30247198 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccgcgcatcaagttttttattggtgtggttttctcaacgaattc 30247297  T
Q  138 acaacac 144  Q
    |||||||    
T  30247298 acaacac 30247304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 8378473 - 8378356
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  8378473 tttatctcttgctgtttt--gtttggattatttgctacccgcttaatttgattacttggtattaatttgctccacgcatcaag-ttttattggtctggtt 8378377  T
Q  124 ttctcaacgaattcacaacac 144  Q
    |||||||||||||||||||||    
T  8378376 ttctcaacgaattcacaacac 8378356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 3324756 - 3324637
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-t 122  Q
    ||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3324756 tttatctcttgttgttttt-gtttgcattaattgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 3324658  T
Q  123 tttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||    
T  3324657 tttctcaacgaattcacaaca 3324637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 15540963 - 15540844
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-t 122  Q
    |||||| |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15540963 tttatcgcttgctgttttt-gtttggattatttgctatccgcttgttttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 15540865  T
Q  123 tttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||    
T  15540864 tttctcaacgaattcacaaca 15540844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 44143843 - 44143721
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  44143843 tttatctcttgctgtttacttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaag-ttttattggtgtg 44143745  T
Q  121 gttttctcaacgaattcacaacac 144  Q
    |||||| |||||||||| ||||||    
T  44143744 gttttcacaacgaattcgcaacac 44143721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 2075320 - 2075436
Alignment:
Q  25 ttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggtt 123  Q
    |||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||  |    
T  2075320 ttatctcttgctatttt-tgtttggattatttgctacccgcttgttttgattacttggtattaatttgctccacgcatcaagttttttattggtgtg--t 2075416  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  2075417 ttctcaacgaattcacaaca 2075436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 34546835 - 34546734
Alignment:
Q  39 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 138  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  34546835 tttttgtttggattatttgctacccgcttaatttgattacttgatattaatttgttccacgcatcaag-ttttattggtgtggttttctcaacaaattca 34546737  T
Q  139 caa 141  Q
    |||    
T  34546736 caa 34546734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 44016637 - 44016514
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgt 119  Q
    ||||||||||| |||||   |||||||  ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44016637 tttatctcttgttgtttacttttgttttaattatttgctatccacttgatttgattacttggtattaatttgctccacgcatcaagtttattattggtgt 44016538  T
Q  120 ggttttctcaacgaattcacaaca 143  Q
    ||||||| ||||||||||||||||    
T  44016537 ggttttcacaacgaattcacaaca 44016514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 25357257 - 25357378
Alignment:
Q  26 tatctcttgctgtttt---ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtgg 121  Q
    ||||||||||||||||   || ||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||||||||||    
T  25357257 tatctcttgctgttttattttcttttgattatttgctacccgcttgatttgattacttgatattattttgctccacacatcaagtttgttattggtgtgg 25357356  T
Q  122 ttttctcaacgaattcacaaca 143  Q
    ||||||||||||||| ||||||    
T  25357357 ttttctcaacgaattgacaaca 25357378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 2121108 - 2121230
Alignment:
Q  24 tttatctcttgctgtttt----ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgt 119  Q
    ||||||||||||||||||    |||||||||||| |||||| || |||||||||||| ||||||||||||||||||||| |||||||||| |||||||||    
T  2121108 tttatctcttgctgttttacttttgtttggattaattgctatccacttgatttgattgcttggtattaatttgctccacacatcaagtttatattggtgt 2121207  T
Q  120 ggttttctcaacgaattcacaacac 144  Q
    |  ||||||||||||||||||||||    
T  2121208 g--tttctcaacgaattcacaacac 2121230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 25410344 - 25410463
Alignment:
Q  26 tatctcttgctgtttt---ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtgg 121  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| || |||||||||| ||||| |||||     
T  25410344 tatctcttgctgttttattttgtttggattatttgctacccgcttgatttgattacttgatattattttgctcaacacatcaagtttgttattagtgtga 25410443  T
Q  122 ttttctcaacgaattcacaa 141  Q
    |||||||||| |||||||||    
T  25410444 ttttctcaacaaattcacaa 25410463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 44010726 - 44010603
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgt 119  Q
    |||||||||||||||||   |||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||| ||| ||||||||||    
T  44010726 tttatctcttgctgtttacttttgtttgaattatttgctatccgcttgatttgattacttgatattaatttgctccatgcatcaaatttattattggtgt 44010627  T
Q  120 ggttttctcaacgaattcacaaca 143  Q
     ||||||  |||||||||||||||    
T  44010626 agttttcagaacgaattcacaaca 44010603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 42006888 - 42006992
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 138  Q
    ||||||||| |||||||| ||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||| || |||||||| | |||||||||    
T  42006888 ttttgtttgaattatttgatactcgcttgatttgattactttgtattaatttgcttcacgcatcaagtttattatttgtatggttttcactacgaattca 42006987  T
Q  139 caaca 143  Q
    |||||    
T  42006988 caaca 42006992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 21369848 - 21369970
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgct-acccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtg 118  Q
    |||||||||||||||||   ||| |||| |||||||  | ||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||| |||    
T  21369848 tttatctcttgctgtttatttttatttgaattattttgtcacccgcttgatttgattacttagtattaatttgctccacgcatcaaatttattattagtg 21369947  T
Q  119 tggttttctcaacgaattcacaa 141  Q
    || ||||| || |||||||||||    
T  21369948 tgcttttcacaccgaattcacaa 21369970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 44512423 - 44512363
Alignment:
Q  84 attaatttgctccacgcatcaagttttt-attggtgtggttttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  44512423 attaatttgctccacgcatcaagttttttattggtgtgtttttctcaacgaattcacaaca 44512363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 24748981 - 24749035
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||    
T  24748981 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaaca 24749035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 443989 - 444044
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtg-gttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||||| ||||||||||| ||||||||| |||||||||||||    
T  443989 ttgctccacacatcaagtttgttattggtgtgagttttctcatcgaattcacaaca 444044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 1606775 - 1606829
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacaca 145  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||||    
T  1606775 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacaca 1606829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 6067107 - 6067048
Alignment:
Q  84 attaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||||||||| |||||||| ||| |||||||| |||| ||| |||| ||||||||    
T  6067107 attaatttgctccacacatcaagtatttgttggtgtgattttttcaccgaaatcacaaca 6067048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 7349167 - 7349117
Alignment:
Q  93 ctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    |||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  7349167 ctccacacatcaagttgttattggtgtgattttttcatcgaattcacaaca 7349117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 7351541 - 7351491
Alignment:
Q  93 ctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    |||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  7351541 ctccacacatcaagttgttattggtgtgattttttcatcgaattcacaaca 7351491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 25542924 - 25542977
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacac 144  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  25542924 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacac 25542977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 31434946 - 31434892
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||||| |||||    
T  31434946 ttgctccacacatcaagtttgttattggtgtgattttctcatcgaattcgcaaca 31434892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 44512499 - 44512439
Alignment:
Q  24 tttatctcttgctgttt---tttgttt-ggattatttgctacccgcttgatttgattactt 80  Q
    |||||||||||||||||   ||||||| ||||||||||||||||||||| ||||||| |||    
T  44512499 tttatctcttgctgtttacttttgttttggattatttgctacccgcttgctttgattcctt 44512439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 18345937 - 18345989
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| || |||||||| ||||| ||||||||||||||||    
T  18345937 ttgctccacacatcaagttgttgttggtgtg-ttttcacaacgaattcacaaca 18345989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 20297758 - 20297810
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  20297758 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 20297810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 38394382 - 38394434
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  38394382 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 38394434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 3e-56; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 15831360 - 15831478
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15831360 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 15831458  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  15831459 ttctcaacgaattcacaaca 15831478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 18587176 - 18587298
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18587176 tttatctcttgctgtttatttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 18587275  T
Q  121 gttttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||||    
T  18587276 gttttctcaacgaattcacaaca 18587298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 15312526 - 15312649
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgt 119  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15312526 tttatctcttgctgtttacttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttttattggtgt 15312625  T
Q  120 ggttttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||||||    
T  15312626 ggttttctcaacgaattcacaaca 15312649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 16688916 - 16688794
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16688916 tttatctcttgctgtttacttttgtttggattatttgctacccgcttgattcgattacttgatattaatttgctccacgcatcaagtttttattggtgtg 16688817  T
Q  121 gttttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||||    
T  16688816 gttttctcaacgaattcacaaca 16688794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 8529477 - 8529600
Alignment:
Q  24 tttatctcttgctgttt---tttgttt-ggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgt 119  Q
    |||||||||||||||||   ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8529477 tttatctcttgctgtttacttttgttttggactatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgt 8529576  T
Q  120 ggttttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||||||    
T  8529577 ggttttctcaacgaattcacaaca 8529600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 11853778 - 11853897
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggt 122  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  11853778 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattgcttggtattaatttgctccacccatcaagttttttattggtgtggt 11853876  T
Q  123 tttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||    
T  11853877 tttctcaacgaattcacaaca 11853897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 55822472 - 55822591
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||| | |||    
T  55822472 tttatctcttgctgttttttgtttggattaattgctacccgcctgatttgattacttgatattaatttgctccacacatcaagtttttattggtatagtt 55822571  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  55822572 ttctcaacgaattcacaaca 55822591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 16489558 - 16489681
Alignment:
Q  24 tttatctcttgctgttt---tttgttt-ggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgt 119  Q
    |||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  16489558 tttatctcttgctgtttacttttgttttggattatttgctacccgcttgatttgattacttgatattaatttgctccacacatcaagtttttattggtgt 16489657  T
Q  120 ggttttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||||||    
T  16489658 ggttttctcaacgaattcacaaca 16489681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 4558516 - 4558639
Alignment:
Q  24 tttatctcttgctgtt---ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgt 119  Q
    ||||||||||||||||   ||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  4558516 tttatctcttgctgttaatttttgtttgaattatttgatacccgcttgatttgattacttggtaataatttgctccacgcatcaagtttattattggtgt 4558615  T
Q  120 ggttttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||||||    
T  4558616 ggttttctcaacgaattcacaaca 4558639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 15317167 - 15317290
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgt 119  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||| |||||||||||||    
T  15317167 tttatctcttgctgtttacttttgtttggattatttgctacccgcttgattggattacttggtattcatttgctccatgcatcaagttttttattggtgt 15317266  T
Q  120 ggttttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||||||    
T  15317267 ggttttctcaacgaattcacaaca 15317290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 41 - 143
Target Start/End: Original strand, 4885100 - 4885202
Alignment:
Q  41 tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcaca 140  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  4885100 tttgtttggattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgatttttacaacgaattcaca 4885199  T
Q  141 aca 143  Q
    |||    
T  4885200 aca 4885202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 4556036 - 4555915
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  4556036 tttatctcttgctgtttacttttgtttggattaattgctacccgcttgatttgattatttggtattaatttgctccacgcatcaa-attttattggtgtg 4555938  T
Q  121 gttttctcaacgaattcacaaca 143  Q
    ||||||||||| |||||||||||    
T  4555937 gttttctcaacaaattcacaaca 4555915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 7050246 - 7050125
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  7050246 tttatctcttgctgtttaattttgtttgaattatatgctacccgcttgatttgataacttggtattaatttgctccacgcatcaag-ttttattggtgtg 7050148  T
Q  121 gttttctcaacgaattcacaaca 143  Q
    |||||| ||||||||||||||||    
T  7050147 gttttcacaacgaattcacaaca 7050125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 4570320 - 4570420
Alignment:
Q  42 ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaa 141  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  4570320 ttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcaaaacgaattcacaa 4570418  T
Q  142 ca 143  Q
    ||    
T  4570419 ca 4570420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 47566698 - 47566821
Alignment:
Q  24 tttatctcttgctgtttt---ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgt 119  Q
    ||||||||||| ||||||   ||||||| |||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  47566698 tttatctcttgttgttttcttttgtttgaattatttgatatccgcttgatttgattacttggtattaatttgctccatgcatcaagtttattattggtgt 47566797  T
Q  120 ggttttctcaacgaattcacaaca 143  Q
    ||||||||||| ||||||||||||    
T  47566798 ggttttctcaaagaattcacaaca 47566821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 36771602 - 36771726
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgt 119  Q
    |||||||||||| ||||   |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||    
T  36771602 tttatctcttgccgtttacttttgtttgaattatttgctacccgcttgatttgattatttggtattaatttgctcaacgcatcaagtttattattgttgt 36771701  T
Q  120 ggttttctcaacgaattcacaacac 144  Q
    ||||||| |||| ||||||||||||    
T  36771702 ggttttcacaacaaattcacaacac 36771726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 36769704 - 36769803
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 138  Q
    ||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  36769704 ttttgtttgaattatttgctacccacttgatttgattacttgatattaatttgcttcacgcatcaagtttattattggtgtggttttcacaacgaattca 36769803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 31300677 - 31300732
Alignment:
Q  88 atttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31300677 atttgcttcacgcatcaagtttttattggtgtggttttctcaacgaattcataaca 31300732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 16639032 - 16639154
Alignment:
Q  24 tttatctcttgctgttt----tttgtttggattat-ttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtg 118  Q
    |||||||||||||||||    |||| ||||||||| ||||   ||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||     
T  16639032 tttatctcttgctgtttattttttgcttggattatattgccttccgcttgatttgattgcttggtttta-tttgctccacacatcaagtttttattggta 16639130  T
Q  119 tggttttctcaacgaattcacaaca 143  Q
    | |||||  ||| ||||||||||||    
T  16639131 t-gtttttgcaaagaattcacaaca 16639154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 31300629 - 31300681
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttg 73  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  31300629 tttatctcttgctgtttacttttgtttggattatttgctacccgcttgatttg 31300681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 16631425 - 16631511
Alignment:
Q  55 ttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    |||| ||||||||||||||||| |||||| ||| ||||||||| | ||||||||||||||||| | |||||  |||| |||||||||||    
T  16631425 ttgccacccgcttgatttgatttcttggtttta-tttgctccatggatcaagtttttattggt-ttgtttttgcaacaaattcacaaca 16631511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 523
Target Start/End: Original strand, 18682666 - 18682788
Alignment:
Q  394 gcatccaactttttgaaatggaagttcacatcattgaacatagattgtgatttgtgaggaaccatctttcaatatcacagtatgtacaaacacttgtatt 493  Q
    |||||||||||||||||||| | ||||||||||||| ||| |||       |||||| ||||||||| ||  ||| | | |||||||| || ||||||||    
T  18682666 gcatccaactttttgaaatgaaggttcacatcattgtacagaga-------ttgtgacgaaccatctatcggtatgaaaatatgtacatactcttgtatt 18682758  T
Q  494 cctaaaggcaatttaatcatatgtacatga 523  Q
    | |||| ||||||||||||||  |||||||    
T  18682759 cttaaaagcaatttaatcatacatacatga 18682788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 25613915 - 25613809
Alignment:
Q  39 tttttgtttggattatttgct-acccgcttgatttgattacttggtattaatttgctccacgcatcaagt-ttttattggtgtggttttctcaacgaatt 136  Q
    |||||||||| |||||||  | ||| |||||||||||||  ||||| ||||||||||| || |||||||| |||||||||||| |||||  |||||||||    
T  25613915 tttttgtttgaattattttttcacctgcttgatttgattgtttggttttaatttgctcaacacatcaagttttttattggtgt-gtttttgcaacgaatt 25613817  T
Q  137 cacaacac 144  Q
    || |||||    
T  25613816 cataacac 25613809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 47563194 - 47563249
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaacac 144  Q
    ||||||||| |||||||||| |||||||||||||||||||| | ||||||||||||    
T  47563194 ttgctccacacatcaagtttgttattggtgtggttttctcatcaaattcacaacac 47563249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 18709056 - 18709003
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| |||||||||||||||| ||| | |||||||||||    
T  18709056 ttgctccacacatcaagttgttattggtgtggttttttcatcaaattcacaaca 18709003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 40637513 - 40637566
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| | |||||||||||||| |||||    
T  40637513 ttgctccacacatcaagttgttattggtgtgatattctcaacgaattcgcaaca 40637566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 16185746 - 16185686
Alignment:
Q  84 attaatttgctccacgcatcaagt-ttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||||||||  |||||||| ||||||||||||| | || |||||||||||||||||    
T  16185746 attaatttgctccatacatcaagtattttattggtgtgatcttttcaacgaattcacaaca 16185686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 18311269 - 18311215
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||||| ||||||||||| |||| ||| |||||||||||||    
T  18311269 ttgctccacacatcaagtttattattggtgtgattttttcatcgaattcacaaca 18311215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 18409246 - 18409192
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||||| ||||||||||| |||| ||| |||||||||||||    
T  18409246 ttgctccacacatcaagtttattattggtgtgattttttcatcgaattcacaaca 18409192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 25358073 - 25358122
Alignment:
Q  93 ctccacgcatcaagt-ttttattggtgtggttttctcaacgaattcacaa 141  Q
    |||||| |||||||| ||||||||||||| |||| |||||||||||||||    
T  25358073 ctccacacatcaagtattttattggtgtgattttttcaacgaattcacaa 25358122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 51015685 - 51015738
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| ||||   |||||||||||||||    
T  51015685 ttgctccacacatcaagttgttattggtgtgttttttcgaacgaattcacaaca 51015738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 4874410 - 4874336
Alignment:
Q  67 tgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    |||||||||| |||||| ||||| ||||||||  ||||||||||  |||||||| ||||  ||||||||||||||||    
T  4874410 tgatttgattgcttggt-ttaatatgctccacatatcaagttttg-ttggtgtgatttttgcaacgaattcacaaca 4874336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 24879427 - 24879471
Alignment:
Q  100 catcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    |||||||||| |||||||||||||||| ||| |||||||||||||    
T  24879427 catcaagtttgttattggtgtggttttttcatcgaattcacaaca 24879471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 24880891 - 24880935
Alignment:
Q  100 catcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    |||||||||| |||||||||||||||| ||| |||||||||||||    
T  24880891 catcaagtttgttattggtgtggttttttcatcgaattcacaaca 24880935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 47078702 - 47078762
Alignment:
Q  84 attaatttgctccacgcatcaagt-ttttattggtgtggttttctcaacgaattcacaaca 143  Q
    |||| |||||||||| ||| |||| ||||||||||||| |||| |||| ||||||||||||    
T  47078702 attattttgctccacacattaagtattttattggtgtgattttttcaaggaattcacaaca 47078762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 3e-56; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 6303524 - 6303642
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6303524 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 6303622  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  6303623 ttctcaacgaattcacaaca 6303642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 10100042 - 10099924
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10100042 tttatctcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 10099944  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  10099943 ttctcaacgaattcacaaca 10099924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 10094041 - 10093923
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10094041 tttatctcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagtttttattggtgtggtt 10093943  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  10093942 ttctcaacgaattcacaaca 10093923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 10200923 - 10200805
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10200923 tttatctcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagtttttattggtgtggtt 10200825  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  10200824 ttctcaacgaattcacaaca 10200805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 10897214 - 10897336
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10897214 tttatctcttgctgtttatttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgttccacgcatcaagtttttattggtgtg 10897313  T
Q  121 gttttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||||    
T  10897314 gttttctcaacgaattcacaaca 10897336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 22625947 - 22625829
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22625947 tttatctcttgttgttttt-gtttggattatttgctacccgcttcttttgattacttggtattaatttgctccacacatcaagtttttattggtgtggtt 22625849  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  22625848 ttctcaacgaattcacaaca 22625829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 10595006 - 10594883
Alignment:
Q  24 tttatctcttgctgttt---tttgttt-ggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgt 119  Q
    |||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  10595006 tttatctcttgctgtttacttttgttttggattatttgctacccgcttgatttgattacttggtattaatttactccacgtatcaagtttttattggtgt 10594907  T
Q  120 ggttttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||||||    
T  10594906 ggttttctcaacgaattcacaaca 10594883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 54193439 - 54193557
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  54193439 tttatctcttgctgtttt-tgtttggattatttgctacccgcttggtttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggtt 54193536  T
Q  124 ttctc-aacgaattcacaaca 143  Q
    ||||| |||||||||||||||    
T  54193537 ttctcaaacgaattcacaaca 54193557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 27544504 - 27544619
Alignment:
Q  25 ttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttt 124  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  27544504 ttatctcttgctgtttt--gtttggattatttgctacccgcttgatttgattacttgatattaatttgctcaacgcatcaag-ttttattggtgtggttt 27544600  T
Q  125 tctcaacgaattcacaaca 143  Q
    |||||||||||||||||||    
T  27544601 tctcaacgaattcacaaca 27544619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 5858753 - 5858875
Alignment:
Q  24 tttatctcttgctgttttttgtt--tggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg 121  Q
    |||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5858753 tttatctcttgctgttttattttgttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtgg 5858851  T
Q  122 ttttctcaa-cgaattcacaacac 144  Q
    ||||||||| ||||||||||||||    
T  5858852 ttttctcaatcgaattcacaacac 5858875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 11079724 - 11079845
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11079724 tttatctcttgctgtttacttttgtttgaattatttgctacccacttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtg 11079822  T
Q  121 gttttctcaacgaattcacaaca 143  Q
    |||||| ||||||||||||||||    
T  11079823 gttttcacaacgaattcacaaca 11079845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 20031293 - 20031170
Alignment:
Q  24 tttatctcttgctgtt---ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgt 119  Q
    ||||||||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  20031293 tttatctcttgctgttcgtttttgtttggattattcgctacccgcttgatttgattacttggtattaatttgctctacgcatcatgttttttattggtgt 20031194  T
Q  120 ggttttctcaacgaattcacaaca 143  Q
    ||||||| ||||||||||||||||    
T  20031193 ggttttcacaacgaattcacaaca 20031170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 29897631 - 29897527
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 138  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||    
T  29897631 ttttgtttggattatttgctacccgcttgatttgattatttggtattaatctgctccacacatcaagtttgttattggtgtggttttctcaacgaattca 29897532  T
Q  139 caaca 143  Q
    |||||    
T  29897531 caaca 29897527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 54188723 - 54188841
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  54188723 tttatctcttgttgtttt-tgtttggattatttgctacccgcttggtttgattacttggtattaatttgctccacgcatcaa-attttattggtgtggtt 54188820  T
Q  124 ttctc-aacgaattcacaaca 143  Q
    ||||| |||||||||||||||    
T  54188821 ttctcaaacgaattcacaaca 54188841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 29913925 - 29913805
Alignment:
Q  26 tatctcttgctgtttt---ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtgg 121  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  29913925 tatctcttgctgttttattttgtttggattatttgctacccgcttgatttgattacttggtattaatctgctccacacatcaagtttgttattggtgtgg 29913826  T
Q  122 ttttctcaacgaattcacaaca 143  Q
    |||||||||| |||||||||||    
T  29913825 ttttctcaac-aattcacaaca 29913805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 3330098 - 3330222
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgt 119  Q
    |||||||||||||||||   ||||||||  |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  3330098 tttatctcttgctgtttacttttgtttgagttatttgctatccgcttgatttgattacttggtattaatttgctccgcgcatcaagtttgttattggtgt 3330197  T
Q  120 ggttttctcaacgaattcacaacac 144  Q
    ||||||| |||||||||||||||||    
T  3330198 ggttttcacaacgaattcacaacac 3330222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 4535841 - 4535947
Alignment:
Q  38 ttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 137  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||  ||||||||||    
T  4535841 ttttttgtttggattatttgctacccacttgatttgattacttggtattaatttgctccacgcattaaatttttattggtctggtttttacaacgaattc 4535940  T
Q  138 acaacac 144  Q
    |||||||    
T  4535941 acaacac 4535947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 10612725 - 10612627
Alignment:
Q  45 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10612725 tttggattatttgctactcgcttgatttgattatctggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcataaca 10612627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 27761962 - 27761840
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   |||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  27761962 tttatctcttgctgtttacttttgtttgaattatttgctacccgcttgatttgattagttgatattaatttgctccatgcatcaagtttttattggtgtg 27761863  T
Q  121 gttttctcaacgaattcacaaca 143  Q
     ||||| ||||||||| ||||||    
T  27761862 tttttcacaacgaatttacaaca 27761840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 10949236 - 10949114
Alignment:
Q  24 tttatctcttgctgtt---ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    ||||||||||||||||   ||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  10949236 tttatctcttgctgttagtttttgtttgaattatttgctacgagcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattgatgtg 10949138  T
Q  121 gttttctcaacgaattcacaacac 144  Q
    |||||| || ||||||||||||||    
T  10949137 gttttcacagcgaattcacaacac 10949114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 47882859 - 47882738
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   |||||||| ||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  47882859 tttatctcttgctgtttacttttgtttgaattatttactacccacttgatttgattaattggtattaatttgctccacgcatcaag-ttttattggtgtg 47882761  T
Q  121 gttttctcaacgaattcacaaca 143  Q
    |||||| ||| ||||||||||||    
T  47882760 gttttcacaatgaattcacaaca 47882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 48390276 - 48390152
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagt--ttttattggtg 118  Q
    |||||||||||||||||   |||||||| |||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  48390276 tttatctcttgctgtttgtttttgtttgaattatttgttacccgtttgatttgattacttgatattaatttgctccacgcatcaagtttttttattggtg 48390177  T
Q  119 tggttttctcaacgaattcacaaca 143  Q
    ||  |||||||||||||||||||||    
T  48390176 tgactttctcaacgaattcacaaca 48390152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 47878147 - 47878033
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   |||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  47878147 tttatctcttgctgtttacttttgtttgaattatttgctacccacttgatttgattactt-gtattaatttgctccacgcatcaag-ttttattggtgtg 47878050  T
Q  121 gttttctcaacgaattc 137  Q
    |||||| ||||||||||    
T  47878049 gttttcacaacgaattc 47878033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 16462406 - 16462495
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttt 110  Q
    |||||||||||||||||   ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16462406 tttatctcttgctgtttatttttgtttggattaattgatacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttt 16462495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 50 - 143
Target Start/End: Original strand, 38003103 - 38003195
Alignment:
Q  50 attatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||  |||  |||||||||||    
T  38003103 attatttgctacccactttatttgattacttggtattaatttgctccacgcgtcaa-attttattggtgtggtttttacaatcaattcacaaca 38003195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 7418306 - 7418378
Alignment:
Q  60 acccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 131  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  7418306 acccgcttgatttgattactttgtattaatttgttccacgcatcaagtttattattggtgtggttttcacaac 7418378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 13893668 - 13893789
Alignment:
Q  24 tttatctcttgctgttt--tttgtttggattat-ttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||| ||||||||  |||||||| ||||| |||  |||||||||||||||||  || || |||||||| || |||||||||| |||||||||||||    
T  13893668 tttatctcctgctgtttattttgtttgaattatattgtcacccgcttgatttgattgtttagttttaatttgttcaacgcatcaaggttttattggtgtg 13893767  T
Q  121 gttttctcaacgaattcacaac 142  Q
     ||||| |||||||||||||||    
T  13893768 tttttcacaacgaattcacaac 13893789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 16997150 - 16997210
Alignment:
Q  84 attaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacac 144  Q
    |||||||||||||||  ||||||| |||||||||||| |||||||| |||||| |||||||    
T  16997150 attaatttgctccacatatcaagtatttattggtgtgattttctcaccgaatttacaacac 16997210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 1620370 - 1620313
Alignment:
Q  84 attaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaa 141  Q
    |||||||| ||||||  |||||||||||||||||||| |||| | |||||||||||||    
T  1620370 attaattttctccacatatcaagtttttattggtgtgatttttttaacgaattcacaa 1620313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 36871202 - 36871149
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||| ||||| |||||| |||| |||||||||||||||||    
T  36871202 ttgctccacacatcaagtatttatcggtgtgattttttcaacgaattcacaaca 36871149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 53468349 - 53468302
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaatt 136  Q
    ||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  53468349 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaatt 53468302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 747125 - 747178
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacac 144  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  747125 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacac 747178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 14634350 - 14634291
Alignment:
Q  83 tattaatttgctccacgcatcaagt-ttttattggtgtggttttctcaacgaattcacaaca 143  Q
    |||||||||| ||||| |||||||| ||||||||||||| |||||  |||||||||||||||    
T  14634350 tattaatttgttccacacatcaagtattttattggtgtgattttc--aacgaattcacaaca 14634291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 24980073 - 24980126
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||    
T  24980073 ttgctccacacatcaagtttgttattggtgtg-ttttctcatcgaattcacaaca 24980126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 50494365 - 50494418
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacac 144  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  50494365 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacac 50494418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 51674662 - 51674608
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||  |||||||||| ||||||||||| |||||||| |||||||||||||    
T  51674662 ttgctccatacatcaagtttgttattggtgtgattttctcatcgaattcacaaca 51674608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 10621418 - 10621366
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  10621418 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 10621366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 25389273 - 25389326
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| |||||||| || |||| ||| |||||||||||||    
T  25389273 ttgctccacacatcaagttgttattggtatgattttttcatcgaattcacaaca 25389326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 27635551 - 27635494
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaacacaa 146  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||||  ||||||||    
T  27635551 ttgctccacacatcaagtttgttattggtgtgattttctcatcgaatttgcaacacaa 27635494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 28412922 - 28412870
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| |||||||||| ||||| ||| |||||||||||||    
T  28412922 ttgctccacacatcaagttgttattggtgt-gttttttcatcgaattcacaaca 28412870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 31151702 - 31151754
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||| |||||||||||| |||| ||| |||||||||||||    
T  31151702 ttgctccacacatcaagtatttattggtgtgatttt-tcatcgaattcacaaca 31151754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 38210737 - 38210789
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  38210737 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 38210789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 39715839 - 39715884
Alignment:
Q  100 catcaagttt-ttattggtgtggttttctcaacgaattcacaacac 144  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||    
T  39715839 catcaagtttgttattggtgcggttttctcatcgaattcacaacac 39715884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 1626579 - 1626523
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaacaca 145  Q
    ||||||||| |||||||||| |||||||||||||||||| |  |||||| |||||||    
T  1626579 ttgctccacacatcaagtttgttattggtgtggttttcttatggaattcgcaacaca 1626523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 3e-56; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 33670936 - 33670817
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33670936 tttacctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgatccacgcatcaagtttttattggtgtggtt 33670837  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  33670836 ttctcaacgaattcacaaca 33670817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 39680257 - 39680377
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-t 122  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  39680257 tttaactcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 39680356  T
Q  123 tttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||    
T  39680357 tttctcaacgaattcacaaca 39680377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 39687201 - 39687321
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-t 122  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  39687201 tttaactcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 39687300  T
Q  123 tttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||    
T  39687301 tttctcaacgaattcacaaca 39687321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 45679935 - 45680054
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-t 122  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  45679935 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 45680033  T
Q  123 tttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||    
T  45680034 tttctcaacgaattcacaaca 45680054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 2736417 - 2736536
Alignment:
Q  24 tttatctcttgctgtttt-ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggt 122  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  2736417 tttatctcttgctgtttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctctacgcatcaag-ttttattggtgtggt 2736515  T
Q  123 tttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||    
T  2736516 tttctcaacgaattcacaaca 2736536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 12781177 - 12781075
Alignment:
Q  39 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12781177 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtatggttttctcaacgaattca 12781078  T
Q  139 caa 141  Q
    |||    
T  12781077 caa 12781075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 39 - 143
Target Start/End: Complemental strand, 27517594 - 27517491
Alignment:
Q  39 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27517594 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttctcaacgaattca 27517496  T
Q  139 caaca 143  Q
    |||||    
T  27517495 caaca 27517491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 17943747 - 17943867
Alignment:
Q  26 tatctcttgctgtttt--ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggt 122  Q
    ||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  17943747 tatctcttgctgttttatttgtttggattatttgctacccgcttaatttgattacttggtattaatttgctccacgcatcaagtttgttattggtgtgtt 17943846  T
Q  123 tttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||    
T  17943847 tttctcaacgaattcacaaca 17943867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 22712495 - 22712373
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22712495 tttatctcttgctgtttatttttgtttggattaattgatacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtg 22712397  T
Q  121 gttttctcaacgaattcacaacac 144  Q
    ||||||||||||||||||||||||    
T  22712396 gttttctcaacgaattcacaacac 22712373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 22717204 - 22717083
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  22717204 tttatctcttgctgtttatttttgtttggattaattgctacccgcttgatttgattacttggtattaatttgctccatgcatcaag-ttttattggtgtg 22717106  T
Q  121 gttttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||||    
T  22717105 gttttctcaacgaattcacaaca 22717083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 2741153 - 2741260
Alignment:
Q  24 tttatctcttgctgtttt-ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggt 122  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  2741153 tttatctcttgctgtttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctctacgcatcaag-ttttattggtgtggt 2741251  T
Q  123 tttctcaac 131  Q
    |||||||||    
T  2741252 tttctcaac 2741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 17462650 - 17462767
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||| |||||||||||| |||  |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  17462650 tttatttcttgctgttttgtgt--ggattaattgctacccgcttgatttgattactcggtattaatttgctccacacatcaagtttttattggtgtggtt 17462747  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  17462748 ttctcaacgaattcacaaca 17462767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 20054735 - 20054610
Alignment:
Q  24 tttatctcttgctgttt---tttgttt-ggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagt--ttttattggt 117  Q
    |||||||||||||||||   ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  20054735 tttatctcttgctgtttacttttgttttggattatttgctatccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttttattggt 20054636  T
Q  118 gtggttttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||||||||    
T  20054635 gtggttttctcaacgaattcacaaca 20054610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 37170729 - 37170607
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   |||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37170729 tttatctcttgctgtttacttttgtttgaattatttactacccacttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 37170630  T
Q  121 gttttctcaacgaattcacaaca 143  Q
     ||||| ||||||||||||||||    
T  37170629 attttcacaacgaattcacaaca 37170607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 20049991 - 20049866
Alignment:
Q  24 tttatctcttgctgttt---tttgttt-ggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagt--ttttattggt 117  Q
    |||||||||||||||||   ||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  20049991 tttatctcttgctgtttacttttgttttggattatttgctatccgattgatttgattacttggtattaatttgctccacgcatcaagtttttttattggt 20049892  T
Q  118 gtggttttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||||||||    
T  20049891 gtggttttctcaacgaattcacaaca 20049866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 38 - 143
Target Start/End: Original strand, 38191241 - 38191345
Alignment:
Q  38 ttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 137  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| ||||||||||    
T  38191241 ttttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcattaag-ttttattggtgtgattttcacaacgaattc 38191339  T
Q  138 acaaca 143  Q
    ||||||    
T  38191340 acaaca 38191345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 30479203 - 30479322
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   ||||||||||||||||||||||| ||||||||||||| || || ||||||| |||||||||||||| | |||||| ||||    
T  30479203 tttatctcttgctgtttatttttgtttggattatttgctacccacttgatttgattattttgtgttaatttactccacgcatcaag-tattattgatgtg 30479301  T
Q  121 gttttctcaacgaattcacaa 141  Q
    ||||||||||| |||||||||    
T  30479302 gttttctcaacaaattcacaa 30479322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 28458751 - 28458693
Alignment:
Q  88 atttgctccacgcatcaagttttt---attggtgtggttttctcaacgaattcacaaca 143  Q
    |||||||| |||||||||||||||   ||||||||||||||| ||| ||||||||||||    
T  28458751 atttgctctacgcatcaagttttttttattggtgtggttttcacaatgaattcacaaca 28458693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 7462844 - 7462789
Alignment:
Q  89 tttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    |||||||||| |||||||||| |||| | ||||||||||||||||||||| |||||    
T  7462844 tttgctccacacatcaagtttgttatcgatgtggttttctcaacgaattcgcaaca 7462789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 17849474 - 17849528
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||||| ||||||||||| |||| ||| |||||||||||||    
T  17849474 ttgctccacacatcaagtttgttattggtgtgattttttcatcgaattcacaaca 17849528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 19007997 - 19008051
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||||| ||||||||||| |||| ||| |||||||||||||    
T  19007997 ttgctccacacatcaagtttgttattggtgtgattttttcatcgaattcacaaca 19008051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 22287234 - 22287181
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||    
T  22287234 ttgctccacacatcaagtttgttattggtgtg-ttttctcatcgaattcacaaca 22287181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 36558773 - 36558720
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacac 144  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  36558773 ttgctccacacatcaagttattattggtgtgatttt-tcatcgaattcacaacac 36558720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 42923346 - 42923293
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||||| ||||||||||| ||||| ||||||||||||||||    
T  42923346 ttgctccacacatcaagtttgttattggtgtg-ttttcacaacgaattcacaaca 42923293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 42923404 - 42923351
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||||| ||||||||||| ||||| ||||||||||||||||    
T  42923404 ttgctccacacatcaagtttgttattggtgtg-ttttcacaacgaattcacaaca 42923351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 36561033 - 36560981
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  36561033 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 36560981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 3e-56; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 9521938 - 9522056
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9521938 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 9522036  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  9522037 ttctcaacgaattcacaaca 9522056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 2232807 - 2232926
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-t 122  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  2232807 tttatctcttgttgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtttttattggtgtggtt 2232905  T
Q  123 tttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||    
T  2232906 tttctcaacgaattcacaaca 2232926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 21353318 - 21353197
Alignment:
Q  26 tatctcttgctgtttt---ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtgg 121  Q
    ||||||||||||||||   |||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  21353318 tatctcttgctgttttattttgtttggattatttgctacccacttgatttaattacttagtattaatttgctccacgcatcaagtttgttattggtgtgg 21353219  T
Q  122 ttttctcaacgaattcacaaca 143  Q
    ||||||||||||||||| ||||    
T  21353218 ttttctcaacgaattcataaca 21353197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 2393253 - 2393133
Alignment:
Q  24 tttatctcttgctgttt--tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg 121  Q
    |||||||||||||||||  ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  2393253 tttatctcttgctgtttactttgtttggattaattgctatccacttgatttgattacttggtattaatttgctccacgcataaag-ttttattggtgtgg 2393155  T
Q  122 ttttctcaacgaattcacaaca 143  Q
    ||||| ||||||||||||||||    
T  2393154 ttttcacaacgaattcacaaca 2393133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 9526679 - 9526796
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg-gt 122  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||  |    
T  9526679 tttatctcttgctgtttt--gtttggattatttgctacccgcttgatttgattacttgttattaatttgctccacacatcaag-ttttattggtgtgatt 9526775  T
Q  123 tttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||    
T  9526776 tttctcaacgaattcacaaca 9526796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 4144660 - 4144543
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgt 119  Q
    |||||||||||||||||   |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||    
T  4144660 tttatctcttgctgtttacttttgtttgaattatttgctatccgcttgatttgattacttggtattaatttgctccacgtatcaagattattattggtgt 4144561  T
Q  120 ggttttctcaacgaattc 137  Q
    ||||||| ||||||||||    
T  4144560 ggttttcacaacgaattc 4144543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 25134295 - 25134399
Alignment:
Q  39 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 138  Q
    |||||||||| ||||||| |||||||||||||||||||| ||| ||||||||| || |||||||||| |||||||||||||||||||| |||||||||||    
T  25134295 tttttgtttgaattatttactacccgcttgatttgattatttgatattaatttacttcacgcatcaaatttttattggtgtggttttcacaacgaattca 25134394  T
Q  139 caaca 143  Q
    |||||    
T  25134395 caaca 25134399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 2401194 - 2401074
Alignment:
Q  24 tttatctcttgctgttt--tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg 121  Q
    ||||||||||| |||||  ||||||||||||| ||| || || ||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||     
T  2401194 tttatctcttgttgtttactttgtttggattaattgttatccacttgatttgattacttggtattaatttgctctacgcatcaag-ttttatttgtgtga 2401096  T
Q  122 ttttctcaacgaattcacaaca 143  Q
    ||||| ||||||||||||||||    
T  2401095 ttttcacaacgaattcacaaca 2401074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 62 - 143
Target Start/End: Complemental strand, 3091039 - 3090960
Alignment:
Q  62 ccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||||||||| |||||| ||| |||||||||| ||| || ||||||||||||| |||||  ||||||||||||||||    
T  3091039 ccgcttgatttgatttcttggtttta-tttgctccacacatgaaatttttattggtgt-gtttttgcaacgaattcacaaca 3090960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 13215465 - 13215519
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaacac 144  Q
    ||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  13215465 ttgctccacacatcaagtttattattggtgtg-ttttctcaacgaattcacaacac 13215519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 25860306 - 25860252
Alignment:
Q  90 ttgctccacgcatcaagtttt-tattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||||  |||||||||||||||| ||||||||||||||||    
T  25860306 ttgctccacacatcaagtttgatattggtgtggttttcacaacgaattcacaaca 25860252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 13762225 - 13762277
Alignment:
Q  93 ctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacaca 145  Q
    |||||| ||||||||| ||||||||||| |||||||| ||||||| |||||||    
T  13762225 ctccacacatcaagttgttattggtgtgattttctcatcgaattcgcaacaca 13762277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 101 - 143
Target Start/End: Complemental strand, 2510226 - 2510184
Alignment:
Q  101 atcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||    
T  2510226 atcaagttgttattggtgtgattttcacaacgaattcacaaca 2510184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 10399722 - 10399664
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacacaagt 148  Q
    ||||||||| ||||||||| ||||||||||| | || ||| ||||||| ||||||||||    
T  10399722 ttgctccacacatcaagttgttattggtgtgatattttcatcgaattcgcaacacaagt 10399664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 85 - 143
Target Start/End: Complemental strand, 13785164 - 13785107
Alignment:
Q  85 ttaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    |||||||||| ||| ||||||||||||||||||||| |||| | ||| |||||||||||    
T  13785164 ttaatttgcttcacacatcaagtttttattggtgtgatttt-ttaacaaattcacaaca 13785107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 23786226 - 23786279
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacac 144  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  23786226 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacac 23786279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 28206965 - 28206912
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||    
T  28206965 ttgctccacacatcaagtttgttattggtgtg-ttttctcatcgaattcacaaca 28206912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 50078689 - 50078635
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||||| |||||    
T  50078689 ttgctccacacatcaagtttgttattggtgtgattttctcatcgaattcgcaaca 50078635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 9459329 - 9459277
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  9459329 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 9459277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 9463156 - 9463104
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  9463156 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 9463104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 16226555 - 16226607
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  16226555 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 16226607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 16231950 - 16232002
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  16231950 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 16232002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 24326052 - 24326107
Alignment:
Q  93 ctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacacaagtt 149  Q
    |||||| ||||||||| ||||||||||| |||| ||| ||||||||||||| |||||    
T  24326052 ctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacataagtt 24326107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 2e-54; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 4812451 - 4812336
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4812451 tttatctcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 4812353  T
Q  124 ttctcaacgaattcaca 140  Q
    |||||||||||||||||    
T  4812352 ttctcaacgaattcaca 4812336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 25684853 - 25684972
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25684853 tttatttcttgctgttttttgtttggattatttgctacccacttgttttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 25684952  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  25684953 ttctcaacgaattcacaaca 25684972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 16752493 - 16752374
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-t 122  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16752493 tttatctcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 16752395  T
Q  123 tttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||    
T  16752394 tttctcaacgaattcacaaca 16752374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 16757229 - 16757110
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-t 122  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16757229 tttatctcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 16757131  T
Q  123 tttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||    
T  16757130 tttctcaacgaattcacaaca 16757110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 28895715 - 28895832
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28895715 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggtt 28895812  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  28895813 ttctcaacgaattcacaaca 28895832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 28328120 - 28328239
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-t 122  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  28328120 tttaactcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 28328218  T
Q  123 tttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||    
T  28328219 tttctcaacgaattcacaaca 28328239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 28332843 - 28332962
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-t 122  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  28332843 tttaactcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 28332941  T
Q  123 tttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||    
T  28332942 tttctcaacgaattcacaaca 28332962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 28890978 - 28891095
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  28890978 tttatctgttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaag-ttttattggtgtggtt 28891075  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  28891076 ttctcaacgaattcacaaca 28891095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 24 - 145
Target Start/End: Original strand, 3276504 - 3276628
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3276504 tttatctcttgctgtttacttttgtttggattatttgctacccgcttgatttgattacttgttattaatttgctccacgcatcaagtttttattggtgtg 3276603  T
Q  121 gttttctcaacgaattcacaacaca 145  Q
    |||||  ||| ||||||||||||||    
T  3276604 gttttaacaaggaattcacaacaca 3276628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 24 - 145
Target Start/End: Original strand, 591005 - 591128
Alignment:
Q  24 tttatctcttgctgttttttgtt--tggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg 121  Q
    |||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||    
T  591005 tttatctcttgctgttttattttattggattatttgctacccgcttgatttgattacttggtattaattttttccacgcatcaaatttttattggtgtgg 591104  T
Q  122 ttttctcaacgaattcacaacaca 145  Q
    ||||||||||||||||||||||||    
T  591105 ttttctcaacgaattcacaacaca 591128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 9021079 - 9020957
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  9021079 tttatctcttgctgtttacttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcattaagtctttattggtgtg 9020980  T
Q  121 gttttctcaacgaattcacaaca 143  Q
    |||||||| || |||||||||||    
T  9020979 gttttctcgacaaattcacaaca 9020957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 23179531 - 23179410
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23179531 tttatctcttgctgtttacttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtg 23179433  T
Q  121 gttttctcaacgaattcacaaca 143  Q
    |||||| ||||||||||||||||    
T  23179432 gttttcacaacgaattcacaaca 23179410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 17799400 - 17799278
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    ||||||||||| |||||   |||||||| |||||||||||||||||||||||||||||||||||||||||| || |||  ||||||||||||||||||||    
T  17799400 tttatctcttgttgtttacttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttacttcacatatcaagtttttattggtgtg 17799301  T
Q  121 gttttctcaacgaattcacaaca 143  Q
    |||||| ||||||||||||||||    
T  17799300 gttttcacaacgaattcacaaca 17799278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 29554803 - 29554704
Alignment:
Q  44 gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  29554803 gtttggattatttgctaccagcttgatttgattacttgatattaatttactccacgcatcaag-tattattggtgtggttttctcaacgaattcacaaca 29554705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 21034100 - 21034181
Alignment:
Q  45 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggtttt 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21034100 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttttattggtgtggtttt 21034181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 26268207 - 26268084
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgt 119  Q
    |||||||||||||||||   |||||||| ||||||| ||||| ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  26268207 tttatctcttgctgtttacttttgtttgaattattttctaccagcttgatttaattacatggtattaatttgctccacgcatcaagtttattattggtgt 26268108  T
Q  120 ggttttctcaacgaattcacaaca 143  Q
    |||||||  |||||||||||||||    
T  26268107 ggttttcagaacgaattcacaaca 26268084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 4823622 - 4823551
Alignment:
Q  71 ttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  4823622 ttgattacttggtattaattttctccacacatcaagtttt-attggtgtggttttctcaacgaattcacaaca 4823551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 33032860 - 33032971
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgt 119  Q
    |||||||||||| ||||   |||||||  |||||||||||| ||||||||||||||||||| ||||||||||||| | |||||||| |||||||||||||    
T  33032860 tttatctcttgccgtttacttttgttttaattatttgctactcgcttgatttgattacttgatattaatttgctctatgcatcaagttttttattggtgt 33032959  T
Q  120 ggttttctcaac 131  Q
     |||||| ||||    
T  33032960 cgttttcacaac 33032971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 30423420 - 30423542
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattat-ttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgt 119  Q
    |||||||||||||||||   |||||||| ||||| |||  ||||||||||||||||| |||||| ||| |||||||||| ||||||||||| ||||||||    
T  30423420 tttatctcttgctgtttatttttgtttgaattatattgtcacccgcttgatttgattgcttggtttta-tttgctccacacatcaagtttt-attggtgt 30423517  T
Q  120 ggttttctcaacgaattcacaacac 144  Q
    | ||||  ||| |||||||||||||    
T  30423518 gatttttgcaatgaattcacaacac 30423542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 522 - 568
Target Start/End: Original strand, 29269792 - 29269838
Alignment:
Q  522 gagccatacagtgttgttgctgctacacaagttgtgtctcagaaaat 568  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||    
T  29269792 gagccatacagtgttgttgctgctacacaagttctgcttcagaaaat 29269838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 39 - 143
Target Start/End: Complemental strand, 2267039 - 2266936
Alignment:
Q  39 tttttgtttggatt-atttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 137  Q
    |||||||||| ||| |||||  ||| |||||||||||||  ||||| ||| ||||||| || |||||||||| |||||||||| ||||  ||||||||||    
T  2267039 tttttgtttgaatttatttgtcacctgcttgatttgattgtttggtttta-tttgctc-acacatcaagtttatattggtgtgatttttgcaacgaattc 2266942  T
Q  138 acaaca 143  Q
    ||||||    
T  2266941 acaaca 2266936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 3874435 - 3874487
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| |||||||||||||||||    
T  3874435 ttgctccacacatcaagttgttattggtgtgatttt-tcaacgaattcacaaca 3874487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 28251463 - 28251410
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  28251463 ttgctccacacatcaagttgttattggtgtgattttttcatcgaattcacaaca 28251410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 183257 - 183310
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||    
T  183257 ttgctccacacatcaagtttgttattggtgtg-ttttctcatcgaattcacaaca 183310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 24873091 - 24873039
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  24873091 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 24873039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 108; Significance: 7e-54; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 3037 - 2919
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3037 tttatttcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 2939  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  2938 ttctcaacgaattcacaaca 2919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 104; Significance: 2e-51; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 231328 - 231445
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  231328 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggtt 231425  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  231426 ttctcaacgaattcacaaca 231445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 1e-49; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 42238466 - 42238588
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42238466 tttatctcttgctgtttatttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 42238565  T
Q  121 gttttctcaacgaattcacaaca 143  Q
    |||||  ||||||||||||||||    
T  42238566 gtttttacaacgaattcacaaca 42238588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 22673042 - 22673168
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 120  Q
    |||||||||||||||||   |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22673042 tttatctcttgctgtttatttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtg 22673140  T
Q  121 gttttctcaacgaattcacaacacaagt 148  Q
    ||||||| ||||||||||||||||||||    
T  22673141 gttttcttaacgaattcacaacacaagt 22673168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 28786607 - 28786728
Alignment:
Q  24 tttatctcttgctgttt----tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgt 119  Q
    |||||||||||||||||    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28786607 tttatctcttgctgtttgctttttgtttgaattatttgctacccgcttgatttgattatttggtattaatttgctccacgcatcaagtttttattggtgt 28786706  T
Q  120 ggttttctcaacgaattcacaa 141  Q
    ||||||||||||||||||||||    
T  28786707 ggttttctcaacgaattcacaa 28786728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 35385406 - 35385303
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  35385406 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtagttttctcaatgaattcac 35385307  T
Q  140 aaca 143  Q
    ||||    
T  35385306 aaca 35385303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 1240662 - 1240760
Alignment:
Q  45 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1240662 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttcctcaacgaattcacaaca 1240760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 2297965 - 2297849
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||    
T  2297965 tttatctcttgctgtttt--gtttggattatttgctacccgcttgatttgattacttggtattaatttactccacgcatcaag-ttttgttggtgtggtt 2297869  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  2297868 ttctcaacgaattcacaaca 2297849  T

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Target: chr5; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 1171024 - 1171142
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    |||||||||||||| |||| |||||||||| |||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  1171024 tttatctcttgctggtttt-gtttggattaattgctacccgcttgttttgattacttgatattaatttgctccacacatcaagtttttattggtgtggtt 1171122  T
Q  124 ttctcaacgaattcacaaca 143  Q
    ||||||||||||||||||||    
T  1171123 ttctcaacgaattcacaaca 1171142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 25452705 - 25452802
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagt-ttttattggtgtgg 121  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25452705 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtattttattggtgtgg 25452802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 40222993 - 40223097
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttct-caacgaattca 138  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||||||||||    
T  40222993 ttttgtttggattatttgctaccctcttgatttgattacttggtattaatttactccacgcatcaaatttttattggtgtggttttttacaacgaattca 40223092  T
Q  139 caaca 143  Q
    |||||    
T  40223093 caaca 40223097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 25445706 - 25445803
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagt-ttttattggtgtgg 121  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25445706 tttatctcttgatgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtattttattggtgtgg 25445803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 11962409 - 11962285
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgt 119  Q
    ||||||||||| |||||   |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| || |||||||| |||||||||||||    
T  11962409 tttatctcttgttgtttacttttgtttgaattatttgctacccgcttgatttgattacttagtattaatttgctaca-gcatcaagttttttattggtgt 11962311  T
Q  120 ggttttctcaacgaattcacaacaca 145  Q
    ||||||| ||||||||||||||||||    
T  11962310 ggttttcacaacgaattcacaacaca 11962285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 20437126 - 20437250
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgt 119  Q
    ||||||||||| |||||   |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| || |||||||    
T  20437126 tttatctcttgttgtttacttttgtttgaattatttgctacccgcttgatttgattacttgatattaatttgctcaacacatcaagtttattgttggtgt 20437225  T
Q  120 ggttttctcaacgaattcacaacac 144  Q
    | ||||| |||||||||||||||||    
T  20437226 gattttcacaacgaattcacaacac 20437250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 16093268 - 16093144
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgt 119  Q
    ||||||||||| |||||   |||||||| |||||||| ||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  16093268 tttatctcttgttgtttacttttgtttgaattatttgttattcgcttgatttgattacttggtattaatttactccacgcatcaagtttattattggtgt 16093169  T
Q  120 gg-ttttctcaacgaattcacaaca 143  Q
    || ||||| ||||||||||||||||    
T  16093168 ggtttttcacaacgaattcacaaca 16093144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 39 - 137
Target Start/End: Complemental strand, 17841207 - 17841110
Alignment:
Q  39 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 137  Q
    |||||||||| |||||||||||||||||| ||||||||||| | ||||||||||| |||||||||||| |||||||||||| |||||| ||||||||||    
T  17841207 tttttgtttgaattatttgctacccgcttaatttgattactcgatattaatttgccccacgcatcaag-ttttattggtgtagttttcacaacgaattc 17841110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 10627611 - 10627695
Alignment:
Q  60 acccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||    
T  10627611 acccgcttgatttgattgcttggttttaatttgctccacgcatcaagtttattattggtgtggttttcacaatgaattcacaaca 10627695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 37705680 - 37705626
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||    
T  37705680 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaaca 37705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 17818388 - 17818338
Alignment:
Q  90 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcac 139  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  17818388 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcac 17818338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 10528990 - 10528937
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||| ||| ||||||||| ||||||||||| |||||||| |||||||||||||    
T  10528990 ttgcttcacacatcaagttgttattggtgtgattttctcatcgaattcacaaca 10528937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 15552638 - 15552686
Alignment:
Q  96 cacgcatcaagtttttattggtgtggttttctcaacgaattcacaacac 144  Q
    ||||||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  15552638 cacgcatcaagttgttattggtgtgattttttcatcgaattcacaacac 15552686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 143
Target Start/End: Complemental strand, 31782413 - 31782311
Alignment:
Q  39 tttttgtttggattat-ttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 137  Q
    |||||||||| ||||| |||  ||||||||||||||||| |||||  || || |||||||| ||||||| |||||||||| || ||||  |||| |||||    
T  31782413 tttttgtttgaattatattgtcacccgcttgatttgatttcttgg--tttatatgctccacacatcaag-ttttattggtatgatttttgcaacaaattc 31782317  T
Q  138 acaaca 143  Q
    ||||||    
T  31782316 acaaca 31782311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 3373029 - 3372977
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  3373029 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 3372977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 15445177 - 15445117
Alignment:
Q  84 attaatttgctccacgcatcaagt-ttttattggtgtggttttctcaacgaattcacaacacaa 146  Q
    |||| |||||||||| |||||||| ||||||||||||| ||||   ||||||||||||||||||    
T  15445177 attattttgctccacacatcaagtattttattggtgtgttttt---aacgaattcacaacacaa 15445117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 16540 - 16656
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 123  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  16540 tttatttcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgatt 16638  T
Q  124 ttctcaacgaattcacaaca 143  Q
    |  ||| |||||||||||||    
T  16639 t--tcatcgaattcacaaca 16656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 16965 - 16885
Alignment:
Q  63 cgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16965 cgcttgatttgattacttggtattaattttttccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 16885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 421 - 474
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacac 144  Q
    ||||||||| ||||||||| |||||||||| | ||||||||||||||||||||||    
T  421 ttgctccacacatcaagttgttattggtgt-gatttctcaacgaattcacaacac 474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 533 - 567
Target Start/End: Complemental strand, 18103 - 18069
Alignment:
Q  533 tgttgttgctgctacacaagttgtgtctcagaaaa 567  Q
    |||||||||||||||||||||| ||||||||||||    
T  18103 tgttgttgctgctacacaagttctgtctcagaaaa 18069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 526 - 554
Target Start/End: Complemental strand, 18014 - 17986
Alignment:
Q  526 catacagtgttgttgctgctacacaagtt 554  Q
    |||||||||||||||||||||||||||||    
T  18014 catacagtgttgttgctgctacacaagtt 17986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 567
Target Start/End: Complemental strand, 64991 - 64941
Alignment:
Q  517 tacatgagccatacagtgttgttgctgctacacaagttgtgtctcagaaaa 567  Q
    |||| |||||||||||||||||| ||||||| |||||| ||||||| ||||    
T  64991 tacaagagccatacagtgttgtttctgctactcaagttctgtctcaaaaaa 64941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 6594 - 6646
Alignment:
Q  90 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 143  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  6594 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 6646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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