View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14507_low_24 (Length: 265)
Name: NF14507_low_24
Description: NF14507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14507_low_24 |
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Alignment Details
Target: chr6 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 1854309 - 1854066
Alignment:
| Q |
19 |
ctccggtagataatataaaacaaaagtactaattatcacttcatgaactttgatgctacaaaatcaacacactaatcttcaataattatgagagtaacca |
118 |
Q |
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| T |
1854309 |
ctccggtagataatataaaacaaaagtactaattatcacttcatgaactttgatgctacaaaatcaacacactaatcttcaataattatgagagtaacca |
1854210 |
T |
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| Q |
119 |
acataatttaacctaggacgaatattatggtggctaaattttggatcaccataatcaacagcctttatcaccatagcctcacgtcttccatcatgttctt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1854209 |
acataatttaacctaggacgaatattatggtggctaaattttggatcaccataatcaacagcctttatcaccatagcctcacgtcttccatcatgttctt |
1854110 |
T |
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| Q |
219 |
gaactgcaccaaacacaatctcatttgtttcacaattcttctca |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1854109 |
gaactgcaccaaacacaatctcatttgtttcacaattcttctca |
1854066 |
T |
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