View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14508_low_10 (Length: 262)
Name: NF14508_low_10
Description: NF14508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14508_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 12 - 256
Target Start/End: Original strand, 37537555 - 37537799
Alignment:
| Q |
12 |
caactccaacattgaatgattaaaccactaccaaatcattattccacattcctttgtgcttatatatagtcctctaactcaagtcaattctcaaatcaat |
111 |
Q |
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| T |
37537555 |
caactccaacattgcatgattaaaccactgccaaatcattattccacattcctttgtgcttatatatagtcctctaactcaagtcaattctcaaatcaat |
37537654 |
T |
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| Q |
112 |
catatctgtcttattaactttgatcatctttagcattccattttcatcatatttagaaaacatgggtgtacatgaaatcattctaagagtatcttttgtg |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37537655 |
catatctgtcttattaactttgatcatctttagcattccattttcatcatatttagaaaacatgggtgtacatgaaatcattctaagagtatcttttgtg |
37537754 |
T |
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| Q |
212 |
gctatgctaatcaaattggccatggctacaaatcatattcttgga |
256 |
Q |
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||||||||||||||||||||||||||||||||||| ||| ||||| |
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| T |
37537755 |
gctatgctaatcaaattggccatggctacaaatcacattgttgga |
37537799 |
T |
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