View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1450_low_23 (Length: 266)
Name: NF1450_low_23
Description: NF1450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1450_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 43899931 - 43900170
Alignment:
| Q |
17 |
actatgaagaatcaaatctcttcttttttgatgaagttgatatttactatgaagaatcaaatctcctataattgatgaaaaccatttaccaacaatatta |
116 |
Q |
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| T |
43899931 |
actatgaagaatcaaatctcttcttttttgatgaagttgatatttactatgaagaatcaaatctcctataattgatgaaaaccatttaccaacaatatta |
43900030 |
T |
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| Q |
117 |
aatcataattccagtcaaatttcgagaagaattgataactaattatcactagtcgcctaataataatcacatttttcaaaatctcatacatttttacatt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43900031 |
aatcataattccagtcaaatttcgagaagaattgataactaattatcactagtcgcctaataataatcacatttttcaaaatctcatacatttttacatt |
43900130 |
T |
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| Q |
217 |
ggcaaaggttgagagtctaagcttagttttagcttttcat |
256 |
Q |
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| T |
43900131 |
ggcaaaggttgagagtctaagcttagttttagcttttcat |
43900170 |
T |
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